The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_013315	Clostridioides difficile CD196, complete genome	4110554	274731	290917	4110554		Synechococcus_phage(23.08%)	14	NA	NA
WP_009888043.1|274731_275244_-	nitroreductase family protein	NA	A0A1V0E011	Clostridioides_phage	87.1	2.3e-83
WP_003425290.1|275693_276170_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	45.8	6.9e-26
WP_003420966.1|276175_276874_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	43.9	1.5e-45
WP_003425288.1|276885_278253_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.0	2.6e-49
WP_003425286.1|278246_279323_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.2	1.7e-64
WP_003436064.1|279316_279910_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.4	4.3e-25
WP_009892582.1|279902_281435_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	49.7	2.3e-38
WP_009888045.1|281445_282696_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
WP_009888046.1|282720_286527_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	24.1	3.0e-31
WP_009888047.1|286732_287605_+	dTDP-4-dehydrorhamnose reductase	NA	H9NCE8	Sphingomonas_phage	30.0	3.8e-14
WP_009888048.1|287713_288595_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	61.9	8.2e-97
WP_009888049.1|288631_289189_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.0	1.3e-47
WP_009888050.1|289226_290210_+	dTDP-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	47.9	9.2e-81
WP_009888051.1|290248_290917_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	47.7	4.1e-24
>prophage 2
NC_013315	Clostridioides difficile CD196, complete genome	4110554	577883	648539	4110554	protease,transposase,tRNA,coat	Streptococcus_phage(33.33%)	53	NA	NA
WP_003425122.1|577883_578600_+|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_003436985.1|578678_579989_+	RsmF rRNA methyltransferase first C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_003425127.1|580088_580625_+	signal peptidase I	NA	NA	NA	NA	NA
WP_003425129.1|580790_581327_+	signal peptidase I	NA	NA	NA	NA	NA
WP_009888346.1|581336_582092_+	TIM barrel protein	NA	NA	NA	NA	NA
WP_009888347.1|582165_583833_+	nucleoside kinase	NA	NA	NA	NA	NA
WP_003417962.1|584357_585287_+	glutaminase A	NA	NA	NA	NA	NA
WP_003417965.1|585384_585948_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009888348.1|586435_587272_+	deoxyribonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.5	2.1e-30
WP_009888349.1|587523_588519_+	aldo/keto reductase	NA	NA	NA	NA	NA
WP_009888350.1|588775_589180_-	RusA family crossover junction endodeoxyribonuclease	NA	NA	NA	NA	NA
WP_009888351.1|590179_591094_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_009888352.1|591199_593437_+	ATP-binding protein	NA	A0A2H4UU76	Bodo_saltans_virus	32.7	9.9e-06
WP_009888353.1|593633_594686_+	endonuclease III	NA	NA	NA	NA	NA
WP_003429657.1|594879_595350_+|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_009888355.1|595385_596234_+	DegV family protein	NA	NA	NA	NA	NA
WP_009892666.1|596589_597594_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_009888358.1|597718_598831_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_003439005.1|599253_600015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003417993.1|600017_600836_+	putative sporulation protein YtxC	NA	NA	NA	NA	NA
WP_003439009.1|601015_601618_+	DUF445 family protein	NA	NA	NA	NA	NA
WP_009888359.1|602480_604400_+|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	39.9	1.3e-144
WP_012816012.1|606335_607454_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	53.2	2.2e-110
WP_009888362.1|608451_609489_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_009888364.1|609481_610168_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888365.1|610179_610500_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009888366.1|610860_612201_+	sensor histidine kinase	NA	X5JAC0	Clostridium_phage	38.8	2.4e-79
WP_009888368.1|612878_613448_-	hydrolase	NA	NA	NA	NA	NA
WP_009888369.1|613608_614859_-	MFS transporter	NA	NA	NA	NA	NA
WP_009888370.1|615150_615729_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009888371.1|616057_617518_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_003429639.1|617891_618497_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009888372.1|618499_621067_+	pyruvate, phosphate dikinase	NA	A0A1V0SGR7	Hokovirus	39.6	4.1e-48
WP_009888376.1|622332_622608_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429630.1|622627_622915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009892676.1|624469_625579_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	53.8	3.1e-109
WP_009888381.1|625643_627767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888382.1|627781_632992_+	50S ribosome-binding GTPase	NA	NA	NA	NA	NA
WP_009888383.1|633216_635316_-	heavy metal translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	28.8	2.2e-68
WP_009892678.1|635358_635754_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003438914.1|636814_637003_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888386.1|637187_637628_-	DUF3788 domain-containing protein	NA	NA	NA	NA	NA
WP_009888387.1|637963_639277_+	DUF3440 domain-containing protein	NA	A0A220GKF8	Streptococcus_phage	41.0	1.6e-93
WP_009888388.1|639294_639831_+	ParB-like nuclease domain-containing protein	NA	A0A220GKT8	Streptococcus_phage	70.3	4.2e-64
WP_009888389.1|640349_640571_+|coat	spore coat associated protein CotJA	coat	NA	NA	NA	NA
WP_009888390.1|640570_640834_+|coat	spore coat protein CotJB	coat	NA	NA	NA	NA
WP_003418062.1|640895_641468_+	manganese catalase family protein	NA	NA	NA	NA	NA
WP_009888391.1|642285_642819_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	50.0	7.0e-35
WP_009888392.1|643043_643223_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_009892682.1|643829_644489_-	plasmid stabilization protein	NA	NA	NA	NA	NA
WP_009888395.1|644925_645339_+	DUF3795 domain-containing protein	NA	NA	NA	NA	NA
WP_009888396.1|645413_645923_+	GrpB family protein	NA	NA	NA	NA	NA
WP_009888399.1|647429_648539_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	54.3	6.6e-112
>prophage 3
NC_013315	Clostridioides difficile CD196, complete genome	4110554	1382188	1454773	4110554	protease,tail,plate,integrase,tRNA,portal	Clostridium_phage(44.44%)	69	1376593:1376611	1419741:1419759
1376593:1376611	attL	ATGAAAAAAAATTTAGAAG	NA	NA	NA	NA
WP_009889097.1|1382188_1383094_+|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
WP_009889098.1|1383224_1384154_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
WP_003419491.1|1384257_1384515_+	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_009889099.1|1384754_1385600_+	DegV family protein	NA	NA	NA	NA	NA
WP_003438316.1|1385724_1387836_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003438319.1|1388101_1388845_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_009889101.1|1389002_1390250_+	insulinase family protein	NA	G3MBJ8	Bacillus_virus	35.1	6.6e-52
WP_003419503.1|1390284_1390530_+	YlmC/YmxH family sporulation protein	NA	NA	NA	NA	NA
WP_009889103.1|1390539_1391763_+	aspartate kinase	NA	NA	NA	NA	NA
WP_003428224.1|1391875_1392610_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	NA	NA	NA	NA
WP_009889104.1|1392732_1395144_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	50.4	3.3e-92
WP_009889105.1|1395146_1396205_+|tRNA	tRNA 2-selenouridine(34) synthase MnmH	tRNA	NA	NA	NA	NA
WP_009892976.1|1396198_1397533_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_009889106.1|1397519_1398062_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_003428218.1|1398349_1399396_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	63.5	2.7e-123
WP_003428216.1|1399571_1401113_+	ribonuclease Y	NA	NA	NA	NA	NA
WP_003438344.1|1401747_1403529_+	UvrD-helicase domain-containing protein	NA	NA	NA	NA	NA
WP_009889108.1|1403610_1404141_-	signal peptidase I	NA	NA	NA	NA	NA
WP_009889109.1|1404180_1405005_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_009889110.1|1405261_1406170_+|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_009889111.1|1406313_1407759_+	adenylosuccinate lyase	NA	NA	NA	NA	NA
WP_003419561.1|1408069_1408522_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_009889112.1|1408934_1410512_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_009892977.1|1410670_1411423_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011861180.1|1411561_1412902_+	6-phospho-alpha-glucosidase	NA	NA	NA	NA	NA
WP_003438357.1|1413013_1414210_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_009889113.1|1414594_1415545_+	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_003438367.1|1415705_1416458_+	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	45.6	1.9e-57
WP_009889114.1|1416549_1417326_-	exonuclease domain-containing protein	NA	NA	NA	NA	NA
WP_003428202.1|1417640_1419539_+	glutamine synthetase	NA	NA	NA	NA	NA
WP_003428201.1|1419666_1420788_-	galactosyldiacylglycerol synthase	NA	NA	NA	NA	NA
1419741:1419759	attR	CTTCTAAATTTTTTTTCAT	NA	NA	NA	NA
WP_009889116.1|1420986_1421319_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012816112.1|1421305_1422364_+	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_009889118.1|1422356_1423427_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_003428196.1|1423528_1424065_+	lipoprotein	NA	NA	NA	NA	NA
WP_009889121.1|1424181_1424889_+	lantibiotic protection ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	48.0	3.6e-55
WP_009889122.1|1424890_1425607_+	lantibiotic immunity ABC transporter MutE/EpiE family permease subunit	NA	NA	NA	NA	NA
WP_009889124.1|1425608_1426367_+	lantibiotic immunity ABC transporter MutG family permease subunit	NA	NA	NA	NA	NA
WP_009889126.1|1426510_1427899_+	two-component system sensor histidine kinase	NA	NA	NA	NA	NA
WP_003428191.1|1427974_1428796_-	pyridoxamine kinase	NA	NA	NA	NA	NA
WP_021361422.1|1429030_1430200_+	amidase domain-containing protein	NA	NA	NA	NA	NA
WP_003419624.1|1430382_1430583_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	66.2	2.7e-16
WP_009889129.1|1431003_1431432_+	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_009889131.1|1431574_1432330_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_003428186.1|1433030_1433537_-	hypothetical protein	NA	A0A0A8WEK1	Clostridium_phage	67.1	4.0e-56
WP_003428185.1|1433618_1433939_-	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	54.5	3.7e-23
WP_003419641.1|1434107_1434305_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_009889133.1|1434409_1434850_+	hypothetical protein	NA	A0A090EUN5	Clostridium_phage	51.4	4.6e-32
WP_009889135.1|1435098_1435542_+	hypothetical protein	NA	A0A1V0DZX9	Clostridioides_phage	36.7	7.6e-19
WP_009889137.1|1435546_1436611_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	A0A1V0DZX4	Clostridioides_phage	52.8	2.6e-97
WP_003419646.1|1436624_1437053_+|tail	phage tail tube protein	tail	A0A1V0DZX1	Clostridioides_phage	51.8	2.8e-34
WP_009889139.1|1437166_1437613_+|portal	phage portal protein	portal	A0A0A7RTP2	Clostridium_phage	36.4	1.1e-12
WP_003419648.1|1437639_1437807_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009889141.1|1437806_1440260_+	hypothetical protein	NA	A0A1V0DZX3	Clostridioides_phage	61.0	6.1e-17
WP_009889143.1|1440259_1440682_+	hypothetical protein	NA	A0A090DBR9	Clostridium_phage	70.4	2.2e-52
WP_009889145.1|1440963_1442493_+	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	81.1	1.0e-243
WP_003438447.1|1442508_1442835_+	DUF2577 family protein	NA	J9QE86	Clostridium_phage	94.4	1.0e-52
WP_003428161.1|1442834_1443263_+	DUF2634 domain-containing protein	NA	A0A0A8WJ32	Clostridium_phage	82.4	5.8e-64
WP_009889148.1|1443255_1444308_+|plate	baseplate J/gp47 family protein	plate	A0A0A8WFP3	Clostridium_phage	71.3	9.3e-140
WP_009889149.1|1444304_1445003_+	DUF2313 domain-containing protein	NA	A0A090D815	Clostridium_phage	56.9	3.3e-48
WP_009889153.1|1445003_1445990_+|tail	phage tail protein	tail	A0A2H4J039	uncultured_Caudovirales_phage	45.8	3.4e-59
WP_009892995.1|1446011_1451189_+	chromosome condensation regulator	NA	A0A0A8WEY5	Clostridium_phage	28.3	8.2e-88
WP_009889155.1|1451205_1451559_+	hypothetical protein	NA	A0A0A8WJF2	Clostridium_phage	42.1	4.2e-12
WP_003419670.1|1451821_1452082_+	hypothetical protein	NA	E2ELK7	Clostridium_phage	90.6	9.9e-35
WP_003419674.1|1452306_1452762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003438466.1|1452989_1453409_-	helix-turn-helix transcriptional regulator	NA	S5MUV6	Brevibacillus_phage	37.2	5.4e-06
WP_003428146.1|1453707_1453917_+	helix-turn-helix transcriptional regulator	NA	Q5YAA3	Bacillus_phage	47.2	5.9e-06
WP_009889160.1|1453948_1454158_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009889162.1|1454374_1454773_-	helix-turn-helix domain-containing protein	NA	A0A1L2JY18	Aeribacillus_phage	29.7	2.7e-07
>prophage 4
NC_013315	Clostridioides difficile CD196, complete genome	4110554	1537465	1546010	4110554		Pandoravirus(33.33%)	10	NA	NA
WP_009889249.1|1537465_1538050_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	52.6	4.2e-57
WP_009889251.1|1538051_1539401_+	aminodeoxychorismate synthase component I	NA	S4VNU7	Pandoravirus	41.2	2.9e-37
WP_003438634.1|1539390_1540134_+	aminotransferase class IV	NA	NA	NA	NA	NA
WP_009889253.1|1540167_1540869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429416.1|1540894_1541467_+	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	51.6	3.0e-44
WP_009893060.1|1541532_1542324_+	dihydropteroate synthase	NA	S4W084	Pandoravirus	28.6	1.8e-23
WP_009889257.1|1542334_1542700_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_009889259.1|1542692_1543199_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_009893063.1|1543179_1543965_+	3-deoxy-7-phosphoheptulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	27.9	1.0e-13
WP_009893065.1|1544219_1546010_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	32.8	5.6e-52
>prophage 5
NC_013315	Clostridioides difficile CD196, complete genome	4110554	1673421	1730314	4110554	capsid,terminase,holin,tail,plate,integrase,portal	Clostridium_phage(79.63%)	68	1667424:1667439	1676644:1676659
1667424:1667439	attL	ATATAAAAGAGCAGAT	NA	NA	NA	NA
WP_003429803.1|1673421_1674552_-|integrase	site-specific integrase	integrase	A0A0A8WIE1	Clostridium_phage	99.7	2.9e-216
WP_009888800.1|1674630_1675338_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888801.1|1675350_1676220_-	HipA domain-containing protein	NA	NA	NA	NA	NA
WP_003429804.1|1676839_1677346_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0A8WEK1	Clostridium_phage	100.0	1.5e-87
1676644:1676659	attR	ATATAAAAGAGCAGAT	NA	NA	NA	NA
WP_009904210.1|1677423_1677765_-	XRE family transcriptional regulator	NA	A0A0A8WE28	Clostridium_phage	88.5	5.8e-51
WP_009904211.1|1678557_1678752_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009904212.1|1678826_1679207_-	helix-turn-helix transcriptional regulator	NA	A0A0A8WF83	Clostridium_phage	64.7	9.1e-37
WP_009904214.1|1679351_1679543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009904215.1|1679554_1680328_+	antirepressor	NA	A0A0A8WIE3	Clostridium_phage	84.3	4.0e-47
WP_009904216.1|1680333_1681137_+	ORF6N domain-containing protein	NA	X5JAW6	Clostridium_phage	68.8	1.2e-91
WP_003429814.1|1681108_1681786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043896778.1|1681921_1682104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429816.1|1682265_1682658_+	helix-turn-helix domain-containing protein	NA	A0A0A8WHS2	Clostridium_phage	89.9	5.3e-56
WP_003429817.1|1682638_1682788_+	hypothetical protein	NA	A0A0A8WIF8	Clostridium_phage	89.4	4.2e-14
WP_003433513.1|1682858_1683296_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009904222.1|1683307_1684474_+	DUF2800 domain-containing protein	NA	S5MUB5	Brevibacillus_phage	55.4	1.6e-116
WP_009904225.1|1684488_1684824_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429822.1|1684876_1685449_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA	NA
WP_009904228.1|1685471_1686044_+	DUF2815 family protein	NA	S5MC21	Brevibacillus_phage	66.1	1.9e-62
WP_009904230.1|1686043_1688002_+	DNA polymerase	NA	A0A0A7RTL3	Clostridium_phage	68.8	3.3e-263
WP_009904232.1|1688013_1690431_+	virulence-associated E domain protein	NA	A0A0A7RTG3	Clostridium_phage	67.7	0.0e+00
WP_003433522.1|1690712_1691039_+	VRR-NUC domain-containing protein	NA	A0A2K5B272	Erysipelothrix_phage	55.4	8.7e-20
WP_009888823.1|1690987_1692358_+	DEAD/DEAH box helicase	NA	A0A1S7FYY5	Listeria_phage	60.0	8.4e-157
WP_009888824.1|1692381_1692519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888825.1|1692511_1692991_+	sigma-70 region 4 domain-containing protein	NA	I2E8Y5	Clostridium_phage	51.0	4.4e-36
WP_009888827.1|1694017_1694992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003429834.1|1695012_1695522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888829.1|1695591_1696284_+	helix-turn-helix domain-containing protein	NA	A0A0A8WFS6	Clostridium_phage	97.0	7.0e-120
WP_012816148.1|1696261_1697515_+|terminase	PBSX family phage terminase large subunit	terminase	X5JAB3	Clostridium_phage	98.3	1.2e-245
WP_009888831.1|1697520_1698963_+|portal	phage portal protein	portal	A0A0A8WIH2	Clostridium_phage	97.7	3.0e-274
WP_009893134.1|1698952_1700488_+|capsid	minor capsid protein	capsid	X5JAI9	Clostridium_phage	71.9	2.5e-194
WP_009888832.1|1700489_1700738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888833.1|1700805_1701369_+	phage scaffolding protein	NA	A0A0A8WFU8	Clostridium_phage	93.6	6.0e-85
WP_009888834.1|1701380_1702271_+	hypothetical protein	NA	X5J9Z5	Clostridium_phage	99.3	1.4e-165
WP_009888835.1|1702289_1702523_+	hypothetical protein	NA	A0A0A8WFD0	Clostridium_phage	93.5	4.6e-31
WP_009888836.1|1702532_1702934_+	hypothetical protein	NA	X5JAJ0	Clostridium_phage	97.0	8.1e-68
WP_003433540.1|1702927_1703275_+	hypothetical protein	NA	X5JAV9	Clostridium_phage	99.1	1.1e-57
WP_009893135.1|1703274_1703565_+	HK97 gp10 family phage protein	NA	A0A0A8WFV8	Clostridium_phage	96.7	4.1e-45
WP_009888838.1|1703674_1704481_+	hypothetical protein	NA	F8UBL7	Clostridium_phage	48.0	2.4e-47
WP_009888839.1|1704829_1705267_+	hypothetical protein	NA	A0A0A8WJT3	Clostridium_phage	95.2	3.3e-75
WP_009888840.1|1705259_1705436_+	hypothetical protein	NA	X5J9Z6	Clostridium_phage	93.1	1.1e-21
WP_009893136.1|1705436_1706747_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	X5JAJ1	Clostridium_phage	92.7	8.1e-234
WP_009888842.1|1706763_1707234_+|tail	phage tail tube protein	tail	A0A0A8WJ62	Clostridium_phage	81.3	1.3e-69
WP_009888843.1|1707292_1708120_+	hypothetical protein	NA	A0A2R4P8H7	Staphylococcus_phage	48.3	1.8e-45
WP_003429853.1|1708191_1708632_+|portal	phage portal protein	portal	X5JAB6	Clostridium_phage	63.7	8.6e-47
WP_003429855.1|1708972_1709134_+	hypothetical protein	NA	A0A0A8WE04	Clostridium_phage	84.3	1.2e-14
WP_003429858.1|1710470_1710659_+	hypothetical protein	NA	X5JAJ2	Clostridium_phage	96.8	2.2e-23
WP_009888845.1|1710777_1711644_+	hypothetical protein	NA	X5JAW1	Clostridium_phage	80.1	3.2e-130
WP_009888847.1|1712508_1713036_+	DUF4352 domain-containing protein	NA	A0A0A8WJ63	Clostridium_phage	97.1	8.7e-62
WP_009888848.1|1713173_1713941_+	DUF4428 domain-containing protein	NA	X5JB37	Clostridium_phage	44.4	6.3e-45
WP_009893138.1|1714006_1716379_+	tape measure protein	NA	X5JAB7	Clostridium_phage	41.5	8.8e-146
WP_009888849.1|1716395_1717085_+	LysM peptidoglycan-binding domain-containing protein	NA	X5J9Z8	Clostridium_phage	94.8	2.0e-119
WP_009893140.1|1717077_1718970_+	C40 family peptidase	NA	A3QSB3	Clostridium_virus	94.8	0.0e+00
WP_009893142.1|1718983_1719244_+	DUF2577 domain-containing protein	NA	A0A0A8WJ65	Clostridium_phage	86.0	1.4e-33
WP_009888851.1|1719248_1719668_+	DUF2634 domain-containing protein	NA	A0A0A8WJV8	Clostridium_phage	95.7	1.3e-71
WP_009888852.1|1719668_1720718_+|plate	baseplate J/gp47 family protein	plate	A0A0A8WFK0	Clostridium_phage	94.8	1.0e-186
WP_003433579.1|1720710_1721328_+	YmfQ family protein	NA	A0A0A8WII4	Clostridium_phage	98.0	8.8e-114
WP_009888853.1|1721339_1722365_+|tail	phage tail protein	tail	A3QSB7	Clostridium_virus	87.8	9.1e-140
WP_009893144.1|1722381_1723908_+	hypothetical protein	NA	B6SBV0	Clostridium_virus	60.8	1.3e-89
WP_009889429.1|1723922_1724216_+	hypothetical protein	NA	E2ELK3	Clostridium_phage	77.9	2.2e-38
WP_009889431.1|1724215_1724398_+	hypothetical protein	NA	A3QSC3	Clostridium_virus	95.0	5.5e-24
WP_009889434.1|1724431_1724998_+	hypothetical protein	NA	A0A0A8WFF2	Clostridium_phage	77.8	3.6e-37
WP_009889435.1|1725028_1725319_+	hypothetical protein	NA	A0A0A8WIF5	Clostridium_phage	95.8	6.9e-45
WP_009889440.1|1725322_1725580_+|holin	phage holin family protein	holin	A3QSC5	Clostridium_virus	100.0	1.1e-41
WP_003429958.1|1725840_1726704_+	Abi family protein	NA	A3QSC6	Clostridium_virus	99.7	8.4e-163
WP_009889444.1|1726782_1727595_+	N-acetylmuramoyl-L-alanine amidase	NA	X5JAJ5	Clostridium_phage	97.4	9.7e-153
WP_009893147.1|1727688_1730088_+	cell wall-binding repeat-containing protein	NA	NA	NA	NA	NA
WP_003433687.1|1730128_1730314_-	hypothetical protein	NA	A0A0A8WHQ4	Clostridium_phage	62.1	7.6e-13
>prophage 6
NC_013315	Clostridioides difficile CD196, complete genome	4110554	3047775	3056728	4110554		Catovirus(50.0%)	8	NA	NA
WP_009891028.1|3047775_3049689_-	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.8	1.1e-26
WP_003431768.1|3049772_3050864_-	glycosyltransferase	NA	A0A1V0SL50	Klosneuvirus	26.2	1.8e-16
WP_012816333.1|3050869_3052213_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	43.6	3.9e-90
WP_003426498.1|3052190_3052943_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	40.5	4.6e-16
WP_004454111.1|3052990_3053899_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_003426502.1|3053920_3054670_-	glycosyltransferase family 2 protein	NA	A0A1V0SAH6	Catovirus	38.8	1.2e-16
WP_009891031.1|3054698_3055874_-	CDP-glycerol glycerophosphotransferase family protein	NA	NA	NA	NA	NA
WP_009891033.1|3055888_3056728_-	glycosyltransferase family 2 protein	NA	A0A2P1ELT8	Moumouvirus	26.3	5.3e-05
>prophage 7
NC_013315	Clostridioides difficile CD196, complete genome	4110554	3836029	3845765	4110554		Clostridioides_phage(100.0%)	12	NA	NA
WP_009888243.1|3836029_3837169_+	Fic family protein	NA	A0A1V0E025	Clostridioides_phage	91.8	4.9e-195
WP_009888245.1|3837501_3838077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009888246.1|3838087_3838276_+	hypothetical protein	NA	A0A1V0E014	Clostridioides_phage	96.8	5.3e-22
WP_009888247.1|3838470_3839028_+	recombinase family protein	NA	A0A1V0E035	Clostridioides_phage	97.8	4.1e-94
WP_012816430.1|3839327_3840071_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	92.3	4.3e-131
WP_021396478.1|3840266_3840485_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	94.4	6.8e-37
WP_012816431.1|3840524_3841067_+	hypothetical protein	NA	A0A1V0DZW7	Clostridioides_phage	95.0	8.3e-92
WP_009888251.1|3842895_3843339_-	hypothetical protein	NA	A0A1V0DZZ2	Clostridioides_phage	82.6	4.3e-62
WP_009888252.1|3843556_3844000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_009888253.1|3844021_3844339_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012816432.1|3844528_3845191_-	DUF4367 domain-containing protein	NA	A0A1V0DZZ4	Clostridioides_phage	76.2	4.4e-87
WP_009888255.1|3845222_3845765_-	sigma-70 family RNA polymerase sigma factor	NA	A0A1V0DZZ1	Clostridioides_phage	96.7	3.8e-89
>prophage 8
NC_013315	Clostridioides difficile CD196, complete genome	4110554	4021584	4037007	4110554		Streptococcus_phage(92.31%)	19	NA	NA
WP_009892195.1|4021584_4021908_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	73.5	1.7e-39
WP_009892197.1|4021922_4022306_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	66.1	6.3e-38
WP_009892199.1|4022401_4022815_+	DUF3788 domain-containing protein	NA	NA	NA	NA	NA
WP_009892201.1|4022921_4023380_+	VOC family protein	NA	NA	NA	NA	NA
WP_009892206.1|4023404_4023947_+	DUF3795 domain-containing protein	NA	NA	NA	NA	NA
WP_012816449.1|4023982_4024510_+	YcxB family protein	NA	NA	NA	NA	NA
WP_012816450.1|4024619_4026014_+	cell division protein FtsK	NA	A0A1S5SFB5	Streptococcus_phage	66.8	1.3e-178
WP_009892210.1|4026293_4027415_+	replication initiation factor domain-containing protein	NA	A0A1S5SEX3	Streptococcus_phage	62.7	1.3e-134
WP_009892216.1|4027421_4027556_+	DUF3789 domain-containing protein	NA	NA	NA	NA	NA
WP_006354966.1|4027556_4027778_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	86.3	1.2e-28
WP_009892220.1|4028097_4028736_+	chloramphenicol acetyltransferase CAT	NA	G3CFL0	Escherichia_phage	35.3	7.6e-36
WP_009892222.1|4028812_4029001_+	hypothetical protein	NA	NA	NA	NA	NA
WP_009892224.1|4029021_4029519_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	41.2	1.3e-27
WP_009892226.1|4029534_4030038_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	47.6	4.4e-39
WP_009892227.1|4030150_4030540_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	73.8	8.1e-49
WP_009892228.1|4030526_4032959_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	76.0	0.0e+00
WP_009892229.1|4032958_4035094_+	YtxH domain-containing protein	NA	A0A1S5SF30	Streptococcus_phage	58.6	1.3e-177
WP_009892230.1|4035090_4036098_+	lysozyme family protein	NA	A0A1S5SEZ8	Streptococcus_phage	67.3	6.4e-130
WP_009892232.1|4036113_4037007_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	53.0	1.6e-79
