assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000063545.1_ASM6354v1	NC_009488	Orientia tsutsugamushi str. Boryong, complete genome	1	1418224-1418374	1	CRISPRCasFinder	no		RT,DEDDh	Orphan	TTGAGTTATATGGAAGCTGAAACTGAAATTGATACTGAAAGTGAAA	46	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh	NA|193aa|up_2|NC_009488.1_1413208_1413787_+,NA|168aa|down_0|NC_009488.1_1420959_1421463_-	NA|107aa|up_9|NC_009488.1_1401660_1401981_+	pfam09673, TrbC_Ftype, Type-F conjugative transfer system pilin assembly protein	NA|235aa|up_8|NC_009488.1_1403674_1404379_+	pfam13728, TraF, F plasmid transfer operon protein	NA|319aa|up_7|NC_009488.1_1405989_1406946_+	pfam10412, TrwB_AAD_bind, Type IV secretion-system coupling protein DNA-binding domain	NA|304aa|up_6|NC_009488.1_1406947_1407859_-	pfam04754, Transposase_31, Putative transposase, YhgA-like	NA|588aa|up_5|NC_009488.1_1407909_1409673_-	TIGR02760, conjugative_transfer_relaxase_protein_TraI, conjugative transfer relaxase protein TraI	NA|399aa|up_4|NC_009488.1_1409893_1411090_-	TIGR02768, conjugal_transfer_protein_TraA, Ti-type conjugative transfer relaxase TraA	NA|133aa|up_3|NC_009488.1_1412722_1413121_+	pfam06412, TraD, Conjugal transfer protein TraD	NA|193aa|up_2|NC_009488.1_1413208_1413787_+	NA	NA|192aa|up_1|NC_009488.1_1413864_1414440_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|269aa|up_0|NC_009488.1_1414540_1415347_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|168aa|down_0|NC_009488.1_1420959_1421463_-	NA	NA|165aa|down_1|NC_009488.1_1427439_1427934_-	pfam13356, Arm-DNA-bind_3, Arm DNA-binding domain	NA|451aa|down_2|NC_009488.1_1428461_1429814_-	pfam13360, PQQ_2, PQQ-like domain	NA|227aa|down_3|NC_009488.1_1429873_1430554_-	pfam10858, DUF2659, Protein of unknown function (DUF2659)	NA|554aa|down_4|NC_009488.1_1436619_1438281_-	pfam06986, TraN, Type-1V conjugative transfer system mating pair stabilisation	NA|107aa|down_5|NC_009488.1_1438303_1438624_-	pfam09673, TrbC_Ftype, Type-F conjugative transfer system pilin assembly protein	NA|220aa|down_6|NC_009488.1_1439972_1440632_-	TIGR02743, hypothetical_protein, type-F conjugative transfer system protein TraW	NA|313aa|down_7|NC_009488.1_1442246_1443185_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|629aa|down_8|NC_009488.1_1444618_1446505_-	COG1138, CcmF, Cytochrome c biogenesis factor [Posttranslational modification, protein turnover, chaperones]	NA|423aa|down_9|NC_009488.1_1446494_1447763_-	COG4536, CorB, Putative Mg2+ and Co2+ transporter CorB [Inorganic ion transport and metabolism]
GCF_000063545.1_ASM6354v1	NC_009488	Orientia tsutsugamushi str. Boryong, complete genome	2	1698843-1698993	2	CRISPRCasFinder	no		RT,DEDDh	Orphan	TTGAGTTATATGGAAGCTGAAACTGAAATTGATACTGAAAGTGAAA	46	0	0	NA	NA	NA	1	1	Orphan	RT,DEDDh	NA|97aa|up_9|NC_009488.1_1680044_1680335_+,NA|183aa|up_3|NC_009488.1_1692836_1693385_+,NA|278aa|up_2|NC_009488.1_1693465_1694299_-,NA|168aa|down_0|NC_009488.1_1701578_1702082_-,NA|119aa|down_3|NC_009488.1_1705999_1706356_-	NA|97aa|up_9|NC_009488.1_1680044_1680335_+	NA	NA|107aa|up_8|NC_009488.1_1681291_1681612_+	pfam09673, TrbC_Ftype, Type-F conjugative transfer system pilin assembly protein	NA|319aa|up_7|NC_009488.1_1685620_1686577_+	pfam10412, TrwB_AAD_bind, Type IV secretion-system coupling protein DNA-binding domain	NA|304aa|up_6|NC_009488.1_1686578_1687490_-	pfam04754, Transposase_31, Putative transposase, YhgA-like	NA|588aa|up_5|NC_009488.1_1687540_1689304_-	TIGR02760, conjugative_transfer_relaxase_protein_TraI, conjugative transfer relaxase protein TraI	NA|152aa|up_4|NC_009488.1_1692286_1692742_+	pfam06412, TraD, Conjugal transfer protein TraD	NA|183aa|up_3|NC_009488.1_1692836_1693385_+	NA	NA|278aa|up_2|NC_009488.1_1693465_1694299_-	NA	NA|192aa|up_1|NC_009488.1_1694483_1695059_-	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription]	NA|269aa|up_0|NC_009488.1_1695159_1695966_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|168aa|down_0|NC_009488.1_1701578_1702082_-	NA	NA|215aa|down_1|NC_009488.1_1702182_1702827_-	sd00045, ANK, ankyrin repeats	NA|652aa|down_2|NC_009488.1_1703556_1705512_-	PHA03095, PHA03095, ankyrin-like protein; Provisional	NA|119aa|down_3|NC_009488.1_1705999_1706356_-	NA	NA|130aa|down_4|NC_009488.1_1706638_1707028_+	pfam13612, DDE_Tnp_1_3, Transposase DDE domain	NA|127aa|down_5|NC_009488.1_1708149_1708530_+	PRK05585, yajC, preprotein translocase subunit YajC; Validated	NA|521aa|down_6|NC_009488.1_1708526_1710089_+	PRK05812, secD, preprotein translocase subunit SecD; Reviewed	NA|401aa|down_7|NC_009488.1_1712684_1713887_-	PRK05764, PRK05764, aspartate aminotransferase; Provisional	NA|346aa|down_8|NC_009488.1_1713995_1715033_+	pfam13847, Methyltransf_31, Methyltransferase domain	NA|278aa|down_9|NC_009488.1_1715092_1715926_+	pfam04333, MlaA, MlaA lipoprotein
