The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_008555	Listeria welshimeri serovar 6b str. SLCC5334, complete genome	2814130	270387	279753	2814130		Enterococcus_phage(33.33%)	9	NA	NA
WP_011701109.1|270387_271230_-	MBL fold metallo-hydrolase	NA	Q0H255	Geobacillus_phage	63.9	4.6e-89
WP_011701110.1|271246_272068_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_011701111.1|272264_273365_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	Q6GZ03	Mycoplasma_phage	39.2	2.9e-19
WP_011701112.1|273654_275805_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A0C5KKX3	Enterococcus_phage	62.6	5.7e-261
WP_011701113.1|275797_276349_+	anaerobic ribonucleoside-triphosphate reductase activating protein	NA	A0A288TZV3	Enterococcus_phage	58.6	3.5e-53
WP_011701114.1|276444_277116_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_011701115.1|277208_277988_-	carbon-nitrogen family hydrolase	NA	M1I6H3	Paramecium_bursaria_Chlorella_virus	24.4	8.7e-10
WP_011701116.1|278077_278740_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_011701117.1|278736_279753_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.4	1.3e-29
>prophage 2
NC_008555	Listeria welshimeri serovar 6b str. SLCC5334, complete genome	2814130	1181873	1276145	2814130	integrase,portal,tail,plate,tRNA,holin,head,protease,terminase,capsid	Listeria_phage(54.24%)	105	1207584:1207600	1246604:1246620
WP_011701990.1|1181873_1182926_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	34.9	1.3e-29
WP_011701991.1|1182925_1185334_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_011701992.1|1185506_1186208_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.4	1.2e-34
WP_011701993.1|1186221_1189632_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_011701994.1|1189726_1190179_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011701995.1|1190194_1193395_+	MMPL family transporter	NA	NA	NA	NA	NA
WP_011701996.1|1193500_1194175_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	47.7	2.0e-50
WP_041176334.1|1194212_1195139_-	ribonuclease HIII	NA	NA	NA	NA	NA
WP_011701998.1|1195293_1195557_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_011701999.1|1195556_1196099_+	CvpA family protein	NA	NA	NA	NA	NA
WP_011702000.1|1196190_1197903_+	DNA polymerase/3'-5' exonuclease PolX	NA	A0A2H4UV14	Bodo_saltans_virus	24.5	1.9e-17
WP_011702001.1|1197925_1200283_+	endonuclease MutS2	NA	Q94M10	Lactobacillus_phage	48.7	7.4e-20
WP_011702002.1|1200363_1200675_+	thioredoxin	NA	A0A1X9I9P5	Staphylococcus_phage	39.6	7.0e-19
WP_011702003.1|1200750_1202562_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_011702004.1|1202755_1203970_+	aspartate kinase	NA	NA	NA	NA	NA
WP_077904715.1|1204037_1204532_-	YslB family protein	NA	NA	NA	NA	NA
WP_011702006.1|1204677_1205478_+	glutamate racemase	NA	NA	NA	NA	NA
WP_011702007.1|1205490_1206237_+	ribonuclease PH	NA	NA	NA	NA	NA
WP_011702008.1|1206240_1206852_+	XTP/dITP diphosphatase	NA	NA	NA	NA	NA
WP_011702009.1|1206890_1207415_+	metallophosphoesterase	NA	NA	NA	NA	NA
1207584:1207600	attL	AATCCCTCTCAGGACGT	NA	NA	NA	NA
WP_011702010.1|1207735_1208869_-|integrase	tyrosine-type recombinase/integrase	integrase	A8ATC7	Listeria_phage	50.5	9.8e-95
WP_041176335.1|1208996_1209296_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011702011.1|1209701_1210175_-	helix-turn-helix transcriptional regulator	NA	Q8W5Y0	Listeria_phage	49.1	7.9e-22
WP_011702012.1|1210441_1210633_+	helix-turn-helix transcriptional regulator	NA	A0A059T5F8	Listeria_phage	90.5	5.4e-22
WP_011702013.1|1210668_1210911_+	hypothetical protein	NA	A8ATD2	Listeria_phage	65.0	1.5e-24
WP_009929542.1|1211343_1211496_+	hypothetical protein	NA	A8ATD4	Listeria_phage	100.0	1.5e-19
WP_011702014.1|1211803_1212079_+	hypothetical protein	NA	A0A059T7V3	Listeria_phage	85.3	3.3e-36
WP_041176433.1|1212099_1212813_+	SAM-dependent DNA methyltransferase	NA	A8ATD5	Listeria_phage	96.2	2.7e-127
WP_011702016.1|1212823_1213768_+|integrase	site-specific integrase	integrase	A8ATD6	Listeria_phage	97.1	3.2e-176
WP_011702017.1|1213780_1214467_+	hypothetical protein	NA	A8ATD7	Listeria_phage	91.6	6.8e-115
WP_011702018.1|1214456_1215023_+	DUF1642 domain-containing protein	NA	Q8W5X2	Listeria_phage	43.1	1.8e-33
WP_011702019.1|1215019_1215463_+	hypothetical protein	NA	A8ASP1	Listeria_phage	89.8	3.1e-44
WP_011702020.1|1215459_1215981_+	hypothetical protein	NA	A8ASP2	Listeria_phage	93.1	1.8e-88
WP_011702021.1|1216341_1216539_+	hypothetical protein	NA	A8ASP4	Listeria_phage	74.6	2.0e-19
WP_041176338.1|1216545_1216977_+	hypothetical protein	NA	A8ATS7	Listeria_phage	51.7	2.7e-37
WP_011702022.1|1216988_1217213_+	hypothetical protein	NA	A0A1W6JL35	Lactococcus_phage	43.7	6.8e-08
WP_011702023.1|1217209_1217383_+	hypothetical protein	NA	A0A059T5G3	Listeria_phage	98.2	2.0e-23
WP_011702024.1|1217379_1217763_+	hypothetical protein	NA	A8ATE8	Listeria_phage	81.9	1.6e-52
WP_003743933.1|1217764_1218244_+	siphovirus Gp157 family protein	NA	Q8W5W1	Listeria_phage	100.0	5.4e-79
WP_003743935.1|1218256_1218946_+	AAA family ATPase	NA	A0A059T7T3	Listeria_phage	100.0	2.6e-130
WP_011702026.1|1219009_1220266_+	DEAD/DEAH box helicase	NA	Q8W5V9	Listeria_phage	94.7	2.6e-229
WP_011702027.1|1220290_1220776_+	DUF669 domain-containing protein	NA	Q8W5V8	Listeria_phage	99.4	1.4e-87
WP_011702028.1|1220798_1223141_+	DNA primase	NA	A0A059T6A4	Listeria_phage	43.2	1.3e-146
WP_011702029.1|1223435_1223762_+	VRR-NUC domain-containing protein	NA	Q8W5V6	Listeria_phage	97.1	1.0e-52
WP_011702030.1|1223783_1224164_+	DUF3310 domain-containing protein	NA	A0A059T7T5	Listeria_phage	51.1	6.1e-41
WP_003743945.1|1224164_1224590_+	DUF722 domain-containing protein	NA	Q8W5V4	Listeria_phage	100.0	2.3e-73
WP_011702031.1|1225239_1225614_+	HNH endonuclease	NA	C5J957	Streptococcus_phage	50.0	1.5e-23
WP_041176339.1|1225654_1226029_+|terminase	P27 family phage terminase small subunit	terminase	A0A0U4JV93	Exiguobacterium_phage	59.0	1.3e-24
WP_011702033.1|1226025_1227777_+|terminase	terminase large subunit	terminase	A6XMJ4	Bacillus_virus	73.9	6.7e-260
WP_011702034.1|1227790_1228972_+|portal	phage portal protein	portal	Q0H263	Geobacillus_phage	59.4	4.4e-130
WP_011702035.1|1228968_1229553_+|head,protease	HK97 family phage prohead protease	head,protease	Q0H262	Geobacillus_phage	51.1	1.2e-43
WP_011702036.1|1229543_1230728_+|capsid	phage major capsid protein	capsid	A0A2H4J3W9	uncultured_Caudovirales_phage	58.8	3.8e-89
WP_011702037.1|1230732_1230912_+	hypothetical protein	NA	A0A0S2SXV2	Bacillus_phage	57.1	3.4e-10
WP_011702038.1|1230911_1231199_+	hypothetical protein	NA	A6XMJ8	Bacillus_virus	63.5	4.3e-23
WP_011702039.1|1231185_1231491_+|head	phage head closure protein	head	Q0H236	Geobacillus_phage	51.0	1.3e-22
WP_011702040.1|1231497_1231851_+	hypothetical protein	NA	A0A290FZT5	Caldibacillus_phage	45.7	5.5e-20
WP_011702041.1|1231847_1232171_+	hypothetical protein	NA	A0A290GDX2	Caldibacillus_phage	47.6	3.1e-17
WP_011702042.1|1232171_1232753_+|tail	phage tail protein	tail	A0A2H4J534	uncultured_Caudovirales_phage	62.8	1.5e-62
WP_011702043.1|1232797_1233154_+	hypothetical protein	NA	D2XR24	Bacillus_phage	57.6	2.0e-30
WP_011702045.1|1233377_1236650_+|tail	phage tail tape measure protein	tail	D2XR25	Bacillus_phage	44.8	1.3e-78
WP_011702046.1|1236646_1237387_+	hypothetical protein	NA	Q8W5Z6	Listeria_phage	23.8	4.6e-08
WP_011702047.1|1237368_1239510_+|tail	phage tail protein	tail	R4IDV9	Listeria_phage	55.3	5.8e-213
WP_011702048.1|1239506_1240610_+|plate	BppU family phage baseplate upper protein	plate	Q8W5Z4	Listeria_phage	65.6	9.3e-98
WP_011702049.1|1240661_1240964_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011702050.1|1240977_1241232_+|holin	phage holin	holin	Q8W5Y9	Listeria_phage	89.0	4.3e-35
WP_011702051.1|1241231_1242194_+	N-acetylmuramoyl-L-alanine amidase	NA	Q8W5Y8	Listeria_phage	53.8	2.0e-80
WP_011702052.1|1242217_1242634_+	hypothetical protein	NA	A0A0B5CTT3	Listeria_phage	45.7	1.0e-25
WP_148264570.1|1242728_1243979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_110133446.1|1244074_1244269_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011702055.1|1244799_1245336_+|protease	matrixin family metalloprotease	protease	NA	NA	NA	NA
WP_011702056.1|1245351_1245993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011702057.1|1246142_1246376_+	hypothetical protein	NA	R4IDW6	Listeria_phage	90.9	2.9e-33
WP_011702060.1|1247482_1248163_-	hypothetical protein	NA	NA	NA	NA	NA
1246604:1246620	attR	AATCCCTCTCAGGACGT	NA	NA	NA	NA
WP_011702061.1|1248183_1248876_-	hypothetical protein	NA	A0A0B5D125	Listeria_phage	77.3	8.4e-81
WP_011702064.1|1250022_1250409_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011702065.1|1250405_1250693_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011702067.1|1251267_1251456_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011702068.1|1251843_1252740_+	Rgg/GadR/MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011702069.1|1252972_1253566_-	YdeI family protein	NA	NA	NA	NA	NA
WP_011702070.1|1253708_1254116_-	glyoxalase/bleomycin resistance/extradiol dioxygenase family protein	NA	NA	NA	NA	NA
WP_011702071.1|1254281_1254881_+	histidine phosphatase family protein	NA	A0A1X9IGJ2	Lactococcus_phage	42.1	3.4e-30
WP_011702072.1|1254911_1255172_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011702073.1|1255294_1256707_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	3.3e-55
WP_011702074.1|1256730_1256994_+	DUF3116 family protein	NA	NA	NA	NA	NA
WP_011702075.1|1257160_1257637_+	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
WP_011702076.1|1257678_1257924_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011702077.1|1257920_1259126_-	MFS transporter	NA	NA	NA	NA	NA
WP_011702078.1|1259328_1259988_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
WP_011702079.1|1260027_1260222_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011702080.1|1260287_1261133_-	YitT family protein	NA	NA	NA	NA	NA
WP_003761913.1|1261461_1261599_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011702081.1|1261748_1262462_+	trehalose operon repressor	NA	NA	NA	NA	NA
WP_011702082.1|1262493_1264140_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
WP_011702083.1|1264158_1265643_-	PTS system trehalose-specific EIIBC component	NA	NA	NA	NA	NA
WP_011702084.1|1265757_1266213_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_011702085.1|1266254_1266719_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011702086.1|1266907_1267822_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011702087.1|1267842_1269090_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	53.0	1.1e-107
WP_011702088.1|1269073_1269904_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	42.8	5.6e-47
WP_011702089.1|1270033_1271173_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011702090.1|1271252_1271648_-	helix-turn-helix transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	55.9	3.0e-14
WP_011702091.1|1271798_1272014_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011702092.1|1272363_1273302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011702093.1|1273416_1274700_+	trigger factor	NA	NA	NA	NA	NA
WP_011702094.1|1274885_1276145_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.7	1.5e-144
>prophage 3
NC_008555	Listeria welshimeri serovar 6b str. SLCC5334, complete genome	2814130	2456961	2464789	2814130		Streptococcus_phage(50.0%)	7	NA	NA
WP_011703156.1|2456961_2457933_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
WP_011703157.1|2457940_2458909_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	42.9	1.9e-67
WP_011703158.1|2458910_2459786_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	3.7e-09
WP_011703159.1|2459894_2461625_-	phospho-sugar mutase	NA	A0A1X9I671	Streptococcus_phage	53.3	1.7e-175
WP_011703160.1|2461652_2462714_-	galactose mutarotase	NA	NA	NA	NA	NA
WP_011703161.1|2462729_2463713_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.3	3.4e-51
WP_011703162.1|2463829_2464789_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	53.4	3.4e-88
>prophage 4
NC_008555	Listeria welshimeri serovar 6b str. SLCC5334, complete genome	2814130	2734398	2744427	2814130		Tupanvirus(33.33%)	6	NA	NA
WP_011703393.1|2734398_2736552_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	34.4	6.7e-44
WP_011703394.1|2736575_2738348_-	DNA helicase RecQ	NA	A0A2K9L3P7	Tupanvirus	38.7	2.2e-80
WP_011703395.1|2738508_2739975_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.0	6.1e-97
WP_011703396.1|2740258_2740789_-	ADP-ribose-binding protein	NA	A0A0K1L687	Scale_drop_disease_virus	44.1	1.4e-27
WP_011703397.1|2740846_2742457_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2K9L0W2	Tupanvirus	30.1	3.7e-47
WP_011703398.1|2742972_2744427_+	glycoside hydrolase family 1 protein	NA	A0A0B5JD41	Pandoravirus	30.1	3.3e-50
