The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_007963	Chromohalobacter salexigens DSM 3043, complete sequence	3696649	692395	703463	3696649	tRNA	Cafeteria_roenbergensis_virus(16.67%)	8	NA	NA
WP_011505926.1|692395_693247_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.3	1.1e-50
WP_011505927.1|693365_694661_+	phosphopyruvate hydratase	NA	W6LP63	Streptococcus_phage	59.3	2.7e-133
WP_011505928.1|695222_695546_-	ferredoxin family protein	NA	NA	NA	NA	NA
WP_011505929.1|695720_698300_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	22.5	2.5e-29
WP_011505930.1|698456_698981_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	51.3	3.7e-28
WP_011505931.1|699119_700178_+	recombinase RecA	NA	A0A2D1GPX2	Mycobacterium_phage	61.9	7.5e-113
WP_011505932.1|700180_700639_+	regulatory protein RecX	NA	NA	NA	NA	NA
WP_011505933.1|700856_703463_+|tRNA	alanine--tRNA ligase	tRNA	A0A2K9L1X7	Tupanvirus	37.6	1.5e-74
>prophage 2
NC_007963	Chromohalobacter salexigens DSM 3043, complete sequence	3696649	1531346	1590450	3696649	protease,capsid,tail,tRNA,head,portal,plate,integrase,lysis	uncultured_Caudovirales_phage(28.95%)	67	1528627:1528646	1565333:1565352
1528627:1528646	attL	TCGTCGATGGAGTAGGGCTC	NA	NA	NA	NA
WP_043558109.1|1531346_1532468_+|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	NA	NA	NA	NA
WP_011506641.1|1532637_1537476_+	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_043558112.1|1537717_1538767_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043558117.1|1538892_1539900_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_011506644.1|1540041_1540251_-	ribosome modulation factor	NA	NA	NA	NA	NA
WP_011506645.1|1540488_1542687_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_011506646.1|1542727_1543012_-	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_011506647.1|1543227_1544379_+	4-phosphoerythronate dehydrogenase PdxB	NA	A0A285PXZ1	Cedratvirus	30.6	6.8e-19
WP_011506648.1|1544513_1545416_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_011506649.1|1545572_1546805_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_011506650.1|1546975_1547935_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA	NA
WP_011506651.1|1548060_1548462_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_011506652.1|1549522_1550485_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.9	2.9e-15
WP_011506653.1|1550481_1551255_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011506654.1|1551256_1552090_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	38.4	7.1e-42
WP_011506655.1|1552173_1552734_+	nitroreductase family protein	NA	NA	NA	NA	NA
WP_011506656.1|1552760_1553240_+	YiiD C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011506657.1|1553527_1554694_-|integrase	site-specific integrase	integrase	A0A2H4JGM5	uncultured_Caudovirales_phage	54.5	1.9e-125
WP_043558124.1|1554834_1555050_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043558128.1|1555051_1555348_-	hypothetical protein	NA	A0A1J0GUZ1	Halomonas_phage	48.9	3.7e-17
WP_043558132.1|1555337_1555556_-	TraR/DksA family transcriptional regulator	NA	Q9ZXI6	Pseudomonas_virus	44.8	1.8e-05
WP_011506659.1|1555559_1555958_-	hypothetical protein	NA	A0A0U4JP55	Pseudomonas_phage	41.2	1.9e-08
WP_011506660.1|1555978_1558645_-	toprim domain-containing protein	NA	A0A077K8T2	Ralstonia_phage	50.6	1.2e-252
WP_011506661.1|1558702_1559095_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011506662.1|1559112_1559376_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA	NA
WP_083831085.1|1559375_1559561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011506663.1|1559598_1559802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011506664.1|1559842_1560058_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148266803.1|1560100_1560424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011506665.1|1560356_1560680_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011506666.1|1560751_1561435_+	helix-turn-helix transcriptional regulator	NA	E5FFF8	Burkholderia_phage	31.0	4.3e-21
WP_011506667.1|1561482_1562259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011506668.1|1562258_1563464_+	DGQHR domain-containing protein	NA	NA	NA	NA	NA
WP_011506669.1|1563479_1564292_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A2I4R668	Erysipelothrix_phage	39.4	1.6e-38
WP_011506670.1|1564356_1565637_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	43.5	2.0e-83
1565333:1565352	attR	TCGTCGATGGAGTAGGGCTC	NA	NA	NA	NA
WP_011506671.1|1565633_1566074_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A2H4J538	uncultured_Caudovirales_phage	40.3	7.6e-19
WP_011506672.1|1566225_1566579_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011506673.1|1567211_1568228_-	phage late control D family protein	NA	A0A2H4JAV0	uncultured_Caudovirales_phage	49.1	7.5e-86
WP_011506674.1|1568224_1568668_-|tail	phage tail protein	tail	Q9ZXJ9	Pseudomonas_virus	57.5	1.9e-41
WP_011506675.1|1568680_1569154_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011506676.1|1569113_1571747_-|tail	phage tail tape measure protein	tail	A0A2H4JE61	uncultured_Caudovirales_phage	36.7	7.8e-135
WP_011506677.1|1571703_1571874_-|tail	GpE family phage tail protein	tail	E5E3U7	Burkholderia_phage	74.3	4.4e-07
WP_043559169.1|1571900_1572209_-|tail	phage tail assembly protein	tail	A4PE51	Ralstonia_virus	57.6	1.6e-20
WP_011506679.1|1572394_1572907_-|tail	phage major tail tube protein	tail	A0A2H4J916	uncultured_Caudovirales_phage	56.1	5.7e-50
WP_011506680.1|1572929_1574114_-|tail	phage tail sheath protein	tail	Q9ZXK4	Pseudomonas_virus	65.8	4.4e-146
WP_011506681.1|1574356_1574731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148266804.1|1574815_1575316_+	hypothetical protein	NA	A0A222YWI5	Escherichia_phage	38.9	2.3e-11
WP_148266805.1|1575585_1576284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011506684.1|1576368_1576926_-	DUF4376 domain-containing protein	NA	A0A1L5C071	Aquamicrobium_phage	41.1	6.5e-07
WP_011506685.1|1576922_1578437_-|tail	phage tail protein	tail	A0A0M3ULH6	Salmonella_phage	54.1	1.1e-53
WP_011506686.1|1578446_1579073_-|tail	phage tail protein I	tail	A0A2H4JAU2	uncultured_Caudovirales_phage	60.3	3.1e-66
WP_011506687.1|1579065_1579977_-|plate	baseplate assembly protein	plate	A0A218M4K5	Erwinia_phage	64.5	3.3e-101
WP_011506688.1|1579973_1580324_-	GPW/gp25 family protein	NA	A0A2H4JE52	uncultured_Caudovirales_phage	53.0	3.9e-26
WP_011506689.1|1580323_1580989_-|plate	phage baseplate assembly protein V	plate	A0A2H4JFJ8	uncultured_Caudovirales_phage	58.8	1.5e-34
WP_011506690.1|1581050_1581509_-	phage virion morphogenesis protein	NA	A0A2H4J927	uncultured_Caudovirales_phage	56.3	4.9e-37
WP_050934504.1|1581498_1581993_-|tail	phage tail protein	tail	F1BUP9	Erwinia_phage	42.3	2.0e-20
WP_148266806.1|1582088_1582559_-|lysis	LysB family phage lysis regulatory protein	lysis	NA	NA	NA	NA
WP_011506693.1|1582555_1583029_-	lysozyme	NA	A0A0U4JP67	Pseudomonas_phage	61.9	2.1e-43
WP_011506694.1|1583018_1583219_-	hypothetical protein	NA	A0A2H4J9Q9	uncultured_Caudovirales_phage	54.5	3.8e-10
WP_043558149.1|1583242_1583455_-|tail	tail protein X	tail	A0A077K8R0	Ralstonia_phage	63.6	9.0e-18
WP_011506696.1|1583451_1583922_-|head	head completion/stabilization protein	head	A0A2H4JCS4	uncultured_Caudovirales_phage	40.4	4.9e-24
WP_011506697.1|1584036_1584702_-	hypothetical protein	NA	A4JWP8	Burkholderia_virus	55.0	8.7e-51
WP_011506698.1|1584711_1585731_-|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	63.0	7.4e-126
WP_011506699.1|1585746_1586562_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S5NPS0	Burkholderia_phage	50.5	1.8e-61
WP_011506700.1|1586705_1588490_+	oxidoreductase	NA	A0A077K8Q7	Ralstonia_phage	57.0	2.1e-200
WP_043559187.1|1588510_1589557_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	59.2	2.3e-114
WP_011506702.1|1589688_1590450_+	DNA adenine methylase	NA	A2I2Y7	Vibrio_virus	60.7	4.0e-92
>prophage 3
NC_007963	Chromohalobacter salexigens DSM 3043, complete sequence	3696649	2502507	2555015	3696649	plate,protease,tRNA	Organic_Lake_phycodnavirus(50.0%)	38	NA	NA
WP_011507529.1|2502507_2503848_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_011507530.1|2503957_2504485_+	DUF615 domain-containing protein	NA	NA	NA	NA	NA
WP_011507531.1|2504503_2505958_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_050934529.1|2505954_2509785_-	TIGR02099 family protein	NA	NA	NA	NA	NA
WP_011507533.1|2509831_2511295_-	ribonuclease G	NA	NA	NA	NA	NA
WP_011507534.1|2511327_2511930_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_043558435.1|2511998_2512481_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
WP_050934581.1|2512477_2513353_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
WP_011507537.1|2513517_2514555_-	rod shape-determining protein	NA	F2Y2E1	Organic_Lake_phycodnavirus	22.0	3.0e-05
WP_011507538.1|2514748_2515036_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_011507539.1|2515075_2516536_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_035412325.1|2516535_2517987_+|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	tRNA	NA	NA	NA	NA
WP_011507541.1|2518189_2519116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011507542.1|2519190_2519379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011507543.1|2519552_2519981_-	hypothetical protein	NA	NA	NA	NA	NA
WP_187290058.1|2520061_2520910_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_011507545.1|2520954_2524437_-	hypothetical protein	NA	NA	NA	NA	NA
WP_187290059.1|2524438_2525314_-	DUF4123 domain-containing protein	NA	A4PE24	Ralstonia_virus	41.5	2.5e-05
WP_011507547.1|2526599_2527553_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011507548.1|2527563_2530191_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011507549.1|2530187_2531084_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_011507551.1|2533830_2534100_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_011507552.1|2534090_2535245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011507553.1|2535247_2536363_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_011507554.1|2536668_2537199_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_011507556.1|2537549_2540042_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_011507557.1|2540069_2540987_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_011507558.1|2541020_2545028_-	ImcF-like protein	NA	NA	NA	NA	NA
WP_011507559.1|2545042_2545756_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_011507560.1|2545752_2547099_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_011507561.1|2547191_2547737_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_043558464.1|2547926_2548430_+	copper resistance protein NlpE N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011507563.1|2548678_2549434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011507564.1|2549490_2550024_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_011507565.1|2550035_2551535_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_011507566.1|2551657_2552140_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_011507567.1|2552139_2553975_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_043558467.1|2553938_2555015_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
