assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000048645.1_ASM4864v1	NC_006368	Legionella pneumophila str. Paris, complete genome	1	190034-192439	1,1	CRISPRCasFinder,CRT	no	cas9,cas1,cas2,cas4	cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3	Type II-B,Type II-C,Type II-A	CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC,CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC	37,37	0	0	NA	NA	NA:NA	33,33	33	TypeII-B,TypeII-A,TypeII-C	cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3,PD-DExK	NA|445aa|up_6|NC_006368.1_178778_180113_+,NA|107aa|up_4|NC_006368.1_183034_183355_+,NA|290aa|down_2|NC_006368.1_194053_194923_+,NA|121aa|down_3|NC_006368.1_194888_195251_+,NA|49aa|down_9|NC_006368.1_199245_199392_+	NA|397aa|up_9|NC_006368.1_174240_175431_-	PRK00073, pgk, phosphoglycerate kinase; Provisional	NA|331aa|up_8|NC_006368.1_175441_176434_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|669aa|up_7|NC_006368.1_176514_178521_-	COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	NA|445aa|up_6|NC_006368.1_178778_180113_+	NA	NA|672aa|up_5|NC_006368.1_180212_182228_+	cd06456, M3A_DCP, Peptidase family M3, dipeptidyl carboxypeptidase (DCP)	NA|107aa|up_4|NC_006368.1_183034_183355_+	NA	cas9|1373aa|up_3|NC_006368.1_183830_187949_+	cd09704, Csx12, CRISPR/Cas system-associated protein Cas9	cas1|331aa|up_2|NC_006368.1_187945_188938_+	cd09634, Cas1_I-II-III, CRISPR/Cas system-associated protein Cas1	cas2|100aa|up_1|NC_006368.1_188944_189244_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas4|198aa|up_0|NC_006368.1_189224_189818_+	cd09637, Cas4_I-A_I-B_I-C_I-D_II-B, CRISPR/Cas system-associated protein Cas4	NA|146aa|down_0|NC_006368.1_192790_193228_+	pfam01863, DUF45, Protein of unknown function DUF45	NA|225aa|down_1|NC_006368.1_193217_193892_-	COG1974, LexA, SOS-response transcriptional repressors (RecA-mediated autopeptidases) [Transcription / Signal transduction mechanisms]	NA|290aa|down_2|NC_006368.1_194053_194923_+	NA	NA|121aa|down_3|NC_006368.1_194888_195251_+	NA	NA|68aa|down_4|NC_006368.1_195263_195467_+	pfam02599, CsrA, Global regulator protein family	NA|95aa|down_5|NC_006368.1_195481_195766_+	pfam04956, TrbC, TrbC/VIRB2 family	NA|94aa|down_6|NC_006368.1_195775_196057_+	pfam05101, VirB3, Type IV secretory pathway, VirB3-like protein	NA|827aa|down_7|NC_006368.1_196043_198524_+	TIGR00929, CAG_pathogenicity_island_protein_23, type IV secretion/conjugal transfer ATPase, VirB4 family	NA|237aa|down_8|NC_006368.1_198520_199231_+	cd14262, VirB5_like, VirB5 protein family	NA|49aa|down_9|NC_006368.1_199245_199392_+	NA
GCF_000048645.1_ASM4864v1	NC_006368	Legionella pneumophila str. Paris, complete genome	2	2315678-2315806	2	CRISPRCasFinder	no	cas3	cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3	Unclear	CTATTCTTAATGCTCAACAGAATAAAAAACAACAGA	36	0	0	NA	NA	NA	1	1	Unclear	cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3,PD-DExK	NA|104aa|up_7|NC_006368.1_2305901_2306213_+,NA|134aa|up_3|NC_006368.1_2310146_2310548_-,NA|651aa|up_0|NC_006368.1_2313170_2315123_-,NA|251aa|down_3|NC_006368.1_2319044_2319797_-,NA|360aa|down_7|NC_006368.1_2326168_2327248_+	NA|392aa|up_9|NC_006368.1_2302583_2303759_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|586aa|up_8|NC_006368.1_2303824_2305582_-	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I	NA|104aa|up_7|NC_006368.1_2305901_2306213_+	NA	NA|70aa|up_6|NC_006368.1_2306951_2307161_+	COG1278, CspC, Cold shock proteins [Transcription]	cas3|469aa|up_5|NC_006368.1_2307400_2308807_+	PRK11776, PRK11776, ATP-dependent RNA helicase DbpA; Provisional	NA|304aa|up_4|NC_006368.1_2308963_2309875_+	COG3965, COG3965, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|134aa|up_3|NC_006368.1_2310146_2310548_-	NA	NA|361aa|up_2|NC_006368.1_2310563_2311646_-	COG2421, COG2421, Predicted acetamidase/formamidase [Energy production and conversion]	NA|250aa|up_1|NC_006368.1_2311679_2312429_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|651aa|up_0|NC_006368.1_2313170_2315123_-	NA	NA|88aa|down_0|NC_006368.1_2317323_2317587_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|98aa|down_1|NC_006368.1_2317758_2318052_-	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|262aa|down_2|NC_006368.1_2318077_2318863_-	pfam01609, DDE_Tnp_1, Transposase DDE domain	NA|251aa|down_3|NC_006368.1_2319044_2319797_-	NA	NA|607aa|down_4|NC_006368.1_2320235_2322056_+	cd15457, NADAR, Escherichia coli swarming motility protein YbiA and related proteins	NA|97aa|down_5|NC_006368.1_2322299_2322590_-	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|581aa|down_6|NC_006368.1_2323928_2325671_+	sd00045, ANK, ankyrin repeats	NA|360aa|down_7|NC_006368.1_2326168_2327248_+	NA	NA|302aa|down_8|NC_006368.1_2327546_2328452_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|585aa|down_9|NC_006368.1_2328666_2330421_-	sd00045, ANK, ankyrin repeats
GCF_000048645.1_ASM4864v1	NC_006368	Legionella pneumophila str. Paris, complete genome	3	3077948-3078442	2	CRT	no		cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3	Orphan	CAGGGATTACCAGGCCCTAAAGGAGAC	27	0	0	NA	NA	NA	10	10	Orphan	cas9,cas1,cas2,cas4,cas3,DEDDh,DinG,WYL,csa3,PD-DExK	NA|404aa|up_6|NC_006368.1_3065740_3066952_-,NA|461aa|up_5|NC_006368.1_3067303_3068686_-,NA|189aa|up_3|NC_006368.1_3072721_3073288_-,NA|220aa|up_0|NC_006368.1_3076955_3077615_+,NA	NA|455aa|up_9|NC_006368.1_3062115_3063480_-	cd00433, Peptidase_M17, Cytosol aminopeptidase family, N-terminal and catalytic domains	NA|524aa|up_8|NC_006368.1_3063484_3065056_-	cd13123, MATE_MurJ_like, MurJ/MviN, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins	NA|89aa|up_7|NC_006368.1_3065413_3065680_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|404aa|up_6|NC_006368.1_3065740_3066952_-	NA	NA|461aa|up_5|NC_006368.1_3067303_3068686_-	NA	NA|1201aa|up_4|NC_006368.1_3069092_3072695_-	sd00010, SLR, Sel1-like repeat	NA|189aa|up_3|NC_006368.1_3072721_3073288_-	NA	NA|241aa|up_2|NC_006368.1_3073284_3074007_-	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD	NA|836aa|up_1|NC_006368.1_3074179_3076687_+	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms]	NA|220aa|up_0|NC_006368.1_3076955_3077615_+	NA	NA|619aa|down_0|NC_006368.1_3078954_3080811_-	PRK00558, uvrC, excinuclease ABC subunit UvrC	NA|220aa|down_1|NC_006368.1_3080822_3081482_-	PRK09483, PRK09483, response regulator; Provisional	NA|273aa|down_2|NC_006368.1_3081606_3082425_-	PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed	NA|366aa|down_3|NC_006368.1_3082864_3083962_+	cd00885, cinA, Competence-damaged protein	NA|342aa|down_4|NC_006368.1_3083920_3084946_-	PRK12298, obgE, GTPase CgtA; Reviewed	NA|93aa|down_5|NC_006368.1_3085159_3085438_-	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|104aa|down_6|NC_006368.1_3085450_3085762_-	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|220aa|down_7|NC_006368.1_3086004_3086664_+	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|190aa|down_8|NC_006368.1_3086780_3087350_+	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|364aa|down_9|NC_006368.1_3087368_3088460_+	PRK09601, PRK09601, redox-regulated ATPase YchF
