assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	1	17439-17527	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	GCGAAACACAGAAATTACGCGTT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|154aa|up_9|NC_006155.1_802_1264_-	PRK11179, PRK11179, DNA-binding transcriptional regulator AsnC; Provisional	NA|331aa|up_8|NC_006155.1_1433_2426_+	COG2502, AsnA, Asparagine synthetase A [Amino acid transport and metabolism]	NA|489aa|up_7|NC_006155.1_2524_3991_-	PRK10997, yieM, ATPase RavA stimulator ViaA	NA|513aa|up_6|NC_006155.1_3994_5533_-	PRK13531, PRK13531, regulatory ATPase RavA; Provisional	NA|623aa|up_5|NC_006155.1_5806_7675_+	PRK10745, trkD, low affinity potassium transporter Kup	NA|140aa|up_4|NC_006155.1_7879_8299_+	PRK11797, PRK11797, D-ribose pyranase; Provisional	NA|309aa|up_3|NC_006155.1_8349_9276_+	PRK11142, PRK11142, ribokinase; Provisional	NA|57aa|up_2|NC_006155.1_9328_9499_+	PRK10423, PRK10423, transcriptional repressor RbsR; Provisional	NA|475aa|up_1|NC_006155.1_9495_10920_-	PRK10504, PRK10504, putative transporter; Provisional	NA|230aa|up_0|NC_006155.1_10999_11689_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|177aa|down_0|NC_006155.1_19222_19753_-	PRK10751, PRK10751, molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional	NA|90aa|down_1|NC_006155.1_20494_20764_+	COG3084, COG3084, Uncharacterized protein conserved in bacteria [Function unknown]	NA|329aa|down_2|NC_006155.1_20854_21841_+	PRK11768, PRK11768, serine/threonine protein kinase	NA|208aa|down_3|NC_006155.1_21868_22492_+	PRK10954, PRK10954, thiol:disulfide interchange protein DsbA	NA|933aa|down_4|NC_006155.1_22982_25781_+	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|217aa|down_5|NC_006155.1_26188_26839_-	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|189aa|down_6|NC_006155.1_27603_28170_+	PRK05244, PRK05244, Der GTPase-activating protein YihI	NA|458aa|down_7|NC_006155.1_28356_29730_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|471aa|down_8|NC_006155.1_29783_31196_-	PRK10923, glnG, nitrogen regulation protein NR(I); Provisional	NA|350aa|down_9|NC_006155.1_31203_32253_-	PRK11073, glnL, nitrogen regulation protein NR(II)
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	2	123188-123300	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	CTTCACTCGGCTGCTCAAATGTGCTTT	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA	NA|175aa|up_9|NC_006155.1_110552_111077_-	PRK05456, PRK05456, ATP-dependent protease subunit HslV	NA|282aa|up_8|NC_006155.1_111176_112022_-	PRK12757, PRK12757, cell division protein FtsN; Provisional	NA|343aa|up_7|NC_006155.1_112087_113116_-	PRK11041, PRK11041, DNA-binding transcriptional regulator CytR; Provisional	NA|733aa|up_6|NC_006155.1_113468_115667_-	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|72aa|up_5|NC_006155.1_115919_116135_+	PRK00019, rpmE, 50S ribosomal protein L31; Reviewed	NA|152aa|up_4|NC_006155.1_116676_117132_-	COG4682, COG4682, Predicted membrane protein [Function unknown]	NA|106aa|up_3|NC_006155.1_117480_117798_-	PRK05264, PRK05264, met regulon transcriptional regulator MetJ	NA|387aa|up_2|NC_006155.1_118175_119336_+	PRK08045, PRK08045, cystathionine gamma-synthase; Provisional	NA|812aa|up_1|NC_006155.1_119338_121774_+	PRK09466, metL, bifunctional aspartate kinase II/homoserine dehydrogenase II; Provisional	NA|295aa|up_0|NC_006155.1_122006_122891_+	PRK09432, metF, methylenetetrahydrofolate reductase	NA|879aa|down_0|NC_006155.1_123719_126356_-	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|388aa|down_1|NC_006155.1_126729_127893_-	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|335aa|down_2|NC_006155.1_128143_129148_+	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|259aa|down_3|NC_006155.1_129327_130104_+	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|458aa|down_4|NC_006155.1_130270_131644_+	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|831aa|down_5|NC_006155.1_132242_134735_+	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|206aa|down_6|NC_006155.1_134962_135580_+	pfam06438, HasA, Heme-binding protein A (HasA)	NA|603aa|down_7|NC_006155.1_135745_137554_+	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|443aa|down_8|NC_006155.1_137629_138958_+	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|268aa|down_9|NC_006155.1_139022_139826_+	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	3	365854-365952	3	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	GCGTGGGGTTTTTGCTGTGTGCGAAACACAGAA	33	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|262aa|up_7|NC_006155.1_352333_353119_+,NA	NA|170aa|up_9|NC_006155.1_350852_351362_-	COG3160, Rsd, Regulator of sigma D [Transcription]	NA|261aa|up_8|NC_006155.1_351458_352241_+	PRK00241, nudC, NAD(+) diphosphatase	NA|262aa|up_7|NC_006155.1_352333_353119_+	NA	NA|356aa|up_6|NC_006155.1_353237_354305_+	PRK00115, hemE, uroporphyrinogen decarboxylase; Validated	NA|247aa|up_5|NC_006155.1_354334_355075_+	PRK11617, PRK11617, deoxyribonuclease V	NA|197aa|up_4|NC_006155.1_355120_355711_+	COG3068, COG3068, Uncharacterized protein conserved in bacteria [Function unknown]	NA|92aa|up_3|NC_006155.1_355899_356175_+	PRK10753, PRK10753, DNA-binding protein HU-alpha	NA|218aa|up_2|NC_006155.1_356224_356878_+	pfam07356, DUF1481, Protein of unknown function (DUF1481)	NA|429aa|up_1|NC_006155.1_357063_358350_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|530aa|up_0|NC_006155.1_358409_359999_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|367aa|down_0|NC_006155.1_366223_367323_+	pfam13683, rve_3, Integrase core domain	NA|260aa|down_1|NC_006155.1_367715_368495_-	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|341aa|down_2|NC_006155.1_368494_369517_-	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|338aa|down_3|NC_006155.1_369820_370834_+	COG0412, COG0412, Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]	NA|552aa|down_4|NC_006155.1_370907_372563_-	PRK09395, actP, cation/acetate symporter ActP	NA|104aa|down_5|NC_006155.1_372559_372871_-	COG3162, COG3162, Predicted membrane protein [Function unknown]	NA|653aa|down_6|NC_006155.1_372927_374886_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|439aa|down_7|NC_006155.1_375740_377057_+	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional	NA|211aa|down_8|NC_006155.1_377234_377867_-	PRK15369, PRK15369, two component system response regulator	NA|940aa|down_9|NC_006155.1_377879_380699_-	PRK15347, PRK15347, two component system sensor kinase
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	4	1766036-1766157	4	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	CTTAATGCCAATATTAATCGACATAATCAATTG	33	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA|73aa|down_0|NC_006155.1_1766513_1766732_+	NA|685aa|up_9|NC_006155.1_1752541_1754596_+	PRK11054, helD, DNA helicase IV; Provisional	NA|155aa|up_8|NC_006155.1_1754656_1755121_-	PRK05234, mgsA, methylglyoxal synthase; Validated	NA|227aa|up_7|NC_006155.1_1755299_1755980_-	PRK03641, PRK03641, DUF2057 family protein	NA|139aa|up_6|NC_006155.1_1756295_1756712_+	COG1832, COG1832, Predicted CoA-binding protein [General function prediction only]	NA|106aa|up_5|NC_006155.1_1756820_1757138_-	PRK14129, PRK14129, heat shock protein HspQ; Provisional	NA|397aa|up_4|NC_006155.1_1757198_1758389_-	PRK15128, PRK15128, 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA|93aa|up_3|NC_006155.1_1758482_1758761_+	PRK14426, PRK14426, acylphosphatase; Provisional	NA|110aa|up_2|NC_006155.1_1758812_1759142_-	COG2920, DsrC, Dissimilatory sulfite reductase (desulfoviridin), gamma subunit [Inorganic ion transport and metabolism]	NA|806aa|up_1|NC_006155.1_1762465_1764883_-	pfam01565, FAD_binding_4, FAD binding domain	NA|249aa|up_0|NC_006155.1_1765036_1765783_-	PRK06172, PRK06172, SDR family oxidoreductase	NA|73aa|down_0|NC_006155.1_1766513_1766732_+	NA	NA|175aa|down_1|NC_006155.1_1766995_1767520_+	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]	NA|428aa|down_2|NC_006155.1_1767509_1768793_+	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II	NA|246aa|down_3|NC_006155.1_1768794_1769532_+	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|413aa|down_4|NC_006155.1_1769547_1770786_+	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]	NA|240aa|down_5|NC_006155.1_1770778_1771498_+	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]	NA|251aa|down_6|NC_006155.1_1771499_1772252_+	PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated	NA|263aa|down_7|NC_006155.1_1772254_1773043_+	cd05233, SDR_c, classical (c) SDRs	NA|147aa|down_8|NC_006155.1_1773129_1773570_+	pfam13924, Lipocalin_5, Lipocalin-like domain	NA|83aa|down_9|NC_006155.1_1773607_1773856_+	PRK07117, PRK07117, acyl carrier protein; Validated
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	5	1891010-1891277	1,5,1	PILER-CR,CRISPRCasFinder,CRT	no	DEDDh	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Unclear	GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA	28,28,28	0	0	NA	NA	I-F:I-F:I-F	3,4,4	4	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|16aa|up_7|NC_006155.1_1881415_1881463_-,NA|219aa|up_5|NC_006155.1_1882972_1883629_-,NA|58aa|down_4|NC_006155.1_1898949_1899123_-	NA|444aa|up_9|NC_006155.1_1878898_1880230_-	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed	NA|300aa|up_8|NC_006155.1_1880233_1881133_-	PRK00489, hisG, ATP phosphoribosyltransferase; Reviewed	NA|16aa|up_7|NC_006155.1_1881415_1881463_-	NA	NA|276aa|up_6|NC_006155.1_1881838_1882666_+	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	NA|219aa|up_5|NC_006155.1_1882972_1883629_-	NA	NA|97aa|up_4|NC_006155.1_1884045_1884336_-	pfam16695, Tai4, Type VI secretion system (T6SS), amidase immunity protein	NA|332aa|up_3|NC_006155.1_1884737_1885733_-	COG1172, AraH, Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components [Carbohydrate transport and metabolism]	NA|230aa|up_2|NC_006155.1_1885729_1886419_-	COG1129, MglA, ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]	NA|364aa|up_1|NC_006155.1_1887571_1888663_+	PRK10586, PRK10586, putative oxidoreductase; Provisional	NA|464aa|up_0|NC_006155.1_1889122_1890514_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	DEDDh|477aa|down_0|NC_006155.1_1891311_1892742_-	PRK11779, sbcB, exonuclease I; Provisional	NA|370aa|down_1|NC_006155.1_1893034_1894144_+	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs	NA|106aa|down_2|NC_006155.1_1894577_1894895_+	PRK05423, PRK05423, DUF496 family protein	NA|1076aa|down_3|NC_006155.1_1895038_1898266_-	pfam11924, IAT_beta, Inverse autotransporter, beta-domain	NA|58aa|down_4|NC_006155.1_1898949_1899123_-	NA	NA|435aa|down_5|NC_006155.1_1899305_1900610_+	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily	NA|141aa|down_6|NC_006155.1_1900618_1901041_-	COG3011, COG3011, Predicted thiol-disulfide oxidoreductase [General function    prediction only]	NA|247aa|down_7|NC_006155.1_1901468_1902209_+	cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs	NA|281aa|down_8|NC_006155.1_1902256_1903099_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|426aa|down_9|NC_006155.1_1903130_1904408_+	cd03324, rTSbeta_L-fuconate_dehydratase, Human rTS beta is encoded by the rTS gene which, through alternative RNA splicing, also encodes rTS alpha whose mRNA is complementary to thymidylate synthase mRNA
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	6	2964428-2965418	6,2,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas3f,cas1	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Type I-F	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTCACTGCCGCACAGGCAGCTTAGAAA,GTTCACTGCCGCACAGGCAGCTTAGAAA	28,28,27,28	0	0	NA	NA	I-F:I-F:I-F:I-F	16,16,13,13	16	TypeI-F	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA|70aa|up_9|NC_006155.1_2952415_2952625_-,NA|425aa|down_1|NC_006155.1_2967558_2968833_-,NA|372aa|down_2|NC_006155.1_2968871_2969987_-	NA|70aa|up_9|NC_006155.1_2952415_2952625_-	NA	NA|453aa|up_8|NC_006155.1_2952748_2954107_+	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|168aa|up_7|NC_006155.1_2954153_2954657_+	COG1795, COG1795, Formaldehyde-activating enzyme nesessary for methanogenesis [Energy    production and conversion]	NA|340aa|up_6|NC_006155.1_2954667_2955687_+	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	cas6f|185aa|up_5|NC_006155.1_2955764_2956319_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|335aa|up_4|NC_006155.1_2956329_2957334_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|317aa|up_3|NC_006155.1_2957351_2958302_-	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|449aa|up_2|NC_006155.1_2958298_2959645_-	cd09735, Csy1_I-F, CRISPR/Cas system-associated protein Csy1	cas3f|1097aa|up_1|NC_006155.1_2959800_2963091_-	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas1|327aa|up_0|NC_006155.1_2963087_2964068_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|415aa|down_0|NC_006155.1_2965755_2967000_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|425aa|down_1|NC_006155.1_2967558_2968833_-	NA	NA|372aa|down_2|NC_006155.1_2968871_2969987_-	NA	NA|313aa|down_3|NC_006155.1_2970109_2971048_-	pfam08950, DUF1861, Protein of unknown function (DUF1861)	NA|352aa|down_4|NC_006155.1_2971074_2972130_-	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase	NA|275aa|down_5|NC_006155.1_2972276_2973101_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|292aa|down_6|NC_006155.1_2973101_2973977_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|429aa|down_7|NC_006155.1_2974085_2975372_-	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism]	NA|347aa|down_8|NC_006155.1_2975643_2976684_+	cd06279, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria	NA|463aa|down_9|NC_006155.1_2976700_2978089_+	PRK15414, PRK15414, phosphomannomutase
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	7	3157266-3157377	7	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	ATTAATTAACCGTTAGGAATTTTCTTCAAA	30	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA|234aa|down_5|NC_006155.1_3164480_3165182_+	NA|450aa|up_9|NC_006155.1_3144223_3145573_-	COG3522, COG3522, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|180aa|up_8|NC_006155.1_3145576_3146116_-	COG3521, COG3521, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|162aa|up_7|NC_006155.1_3146389_3146875_-	COG3157, Hcp, Type VI protein secretion system component Hcp (secreted cytotoxin) [Intracellular trafficking, secretion,    and vesicular transport]	NA|501aa|up_6|NC_006155.1_3147207_3148710_-	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|175aa|up_5|NC_006155.1_3148733_3149258_-	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|203aa|up_4|NC_006155.1_3149363_3149972_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|891aa|up_3|NC_006155.1_3149956_3152629_-	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion]	NA|254aa|up_2|NC_006155.1_3152756_3153518_-	PRK09926, PRK09926, fimbrial chaperone	NA|182aa|up_1|NC_006155.1_3153674_3154220_-	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion]	NA|886aa|up_0|NC_006155.1_3154430_3157088_-	TIGR03345, VI_ClpV1, type VI secretion ATPase, ClpV1 family	NA|627aa|down_0|NC_006155.1_3157871_3159752_+	COG3519, COG3519, Type VI protein secretion system component VasA [Intracellular trafficking, secretion, and    vesicular transport]	NA|342aa|down_1|NC_006155.1_3159751_3160777_+	COG3520, COG3520, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|398aa|down_2|NC_006155.1_3160875_3162069_+	COG3515, COG3515, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|344aa|down_3|NC_006155.1_3162075_3163107_+	pfam00419, Fimbrial, Fimbrial protein	NA|446aa|down_4|NC_006155.1_3163146_3164484_+	pfam11397, GlcNAc, Glycosyltransferase (GlcNAc)	NA|234aa|down_5|NC_006155.1_3164480_3165182_+	NA	NA|561aa|down_6|NC_006155.1_3165182_3166865_+	COG2885, OmpA, Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]	NA|161aa|down_7|NC_006155.1_3166861_3167344_+	COG5435, COG5435, Uncharacterized conserved protein [Function unknown]	NA|201aa|down_8|NC_006155.1_3167716_3168319_-	smart00421, HTH_LUXR, helix_turn_helix, Lux Regulon	NA|365aa|down_9|NC_006155.1_3169587_3170682_-	PRK10760, PRK10760, murein hydrolase B; Provisional
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	8	3240031-3240127	8	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	ACTAATATCTCCGGCCATTTTCCACTGC	28	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA|139aa|down_6|NC_006155.1_3248179_3248596_-,NA|242aa|down_7|NC_006155.1_3249393_3250119_-,NA|224aa|down_9|NC_006155.1_3250825_3251497_-	NA|236aa|up_9|NC_006155.1_3227009_3227717_+	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|298aa|up_8|NC_006155.1_3229561_3230455_-	PRK11761, cysM, cysteine synthase CysM	NA|364aa|up_7|NC_006155.1_3230625_3231717_-	PRK10851, PRK10851, sulfate/thiosulfate ABC transporter ATP-binding protein CysA	NA|292aa|up_6|NC_006155.1_3231706_3232582_-	PRK11602, cysW, sulfate/thiosulfate ABC transporter permease CysW	NA|278aa|up_5|NC_006155.1_3232581_3233415_-	PRK10971, PRK10971, sulfate/thiosulfate ABC transporter permease CysT	NA|346aa|up_4|NC_006155.1_3233414_3234452_-	PRK10852, PRK10852, thiosulfate ABC transporter substrate-binding protein CysP	NA|511aa|up_3|NC_006155.1_3234784_3236317_-	PRK03893, PRK03893, putative sialic acid transporter; Provisional	NA|293aa|up_2|NC_006155.1_3236921_3237800_-	COG1737, RpiR, Transcriptional regulators [Transcription]	NA|157aa|up_1|NC_006155.1_3237989_3238460_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|291aa|up_0|NC_006155.1_3238541_3239414_-	PRK05082, PRK05082, N-acetylmannosamine kinase; Provisional	NA|249aa|down_0|NC_006155.1_3241044_3241791_+	COG3010, NanE, Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism]	NA|298aa|down_1|NC_006155.1_3241853_3242747_+	cd00954, NAL, N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL)	NA|300aa|down_2|NC_006155.1_3242844_3243744_-	COG2837, COG2837, Predicted iron-dependent peroxidase [Inorganic ion transport and metabolism]	NA|204aa|down_3|NC_006155.1_3243921_3244533_-	PRK10718, PRK10718, RpoE-regulated lipoprotein; Provisional	NA|138aa|down_4|NC_006155.1_3244895_3245309_+	COG3111, COG3111, Periplasmic protein with OB-fold [Function unknown]	NA|760aa|down_5|NC_006155.1_3245808_3248088_+	TIGR01414, Contains:_AIDA-I_translocator, outer membrane autotransporter barrel domain	NA|139aa|down_6|NC_006155.1_3248179_3248596_-	NA	NA|242aa|down_7|NC_006155.1_3249393_3250119_-	NA	NA|236aa|down_8|NC_006155.1_3250121_3250829_-	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	NA|224aa|down_9|NC_006155.1_3250825_3251497_-	NA
GCF_000047365.1_ASM4736v1	NC_006155	Yersinia pseudotuberculosis IP 32953, complete genome	9	4056248-4056327	9	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	Orphan	CAGCCGCAGCCACGCTCAGCCATTC	25	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas3f,cas1	NA,NA|152aa|down_5|NC_006155.1_4062988_4063444_-,NA|157aa|down_6|NC_006155.1_4063470_4063941_-,NA|77aa|down_8|NC_006155.1_4065458_4065689_-,NA|53aa|down_9|NC_006155.1_4066243_4066402_+	NA|94aa|up_9|NC_006155.1_4043531_4043813_+	COG2960, COG2960, Uncharacterized protein conserved in bacteria [Function unknown]	NA|417aa|up_8|NC_006155.1_4044137_4045388_-	PRK11021, PRK11021, putative transporter; Provisional	NA|477aa|up_7|NC_006155.1_4045424_4046855_-	PRK11316, PRK11316, bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA|952aa|up_6|NC_006155.1_4046989_4049845_-	PRK11072, PRK11072, bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA|436aa|up_5|NC_006155.1_4049992_4051300_-	COG3025, COG3025, Uncharacterized conserved protein [Function unknown]	NA|207aa|up_4|NC_006155.1_4051603_4052224_+	PRK10884, PRK10884, SH3 domain-containing protein; Provisional	NA|413aa|up_3|NC_006155.1_4052401_4053640_+	PRK10885, cca, multifunctional CCA addition/repair protein	NA|273aa|up_2|NC_006155.1_4053875_4054694_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|120aa|up_1|NC_006155.1_4054967_4055327_-	PRK11593, folB, bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase	NA|217aa|up_0|NC_006155.1_4055434_4056085_+	PRK00220, PRK00220, glycerol-3-phosphate 1-O-acyltransferase PlsY	NA|338aa|down_0|NC_006155.1_4056330_4057344_-	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|72aa|down_1|NC_006155.1_4057756_4057972_+	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed	NA|583aa|down_2|NC_006155.1_4058107_4059856_+	PRK05667, dnaG, DNA primase; Validated	NA|613aa|down_3|NC_006155.1_4060013_4061852_+	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|201aa|down_4|NC_006155.1_4062369_4062972_-	COG3728, XtmA, Phage terminase, small subunit [DNA replication, recombination, and repair]	NA|152aa|down_5|NC_006155.1_4062988_4063444_-	NA	NA|157aa|down_6|NC_006155.1_4063470_4063941_-	NA	NA|459aa|down_7|NC_006155.1_4063949_4065326_-	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|77aa|down_8|NC_006155.1_4065458_4065689_-	NA	NA|53aa|down_9|NC_006155.1_4066243_4066402_+	NA
