The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012214	Erwinia pyrifoliae Ep1/96, complete genome	4026322	685462	736894	4026322	plate,lysis,transposase	Salmonella_phage(75.0%)	48	NA	NA
WP_012666951.1|685462_688708_+	DEAD/DEAH box helicase	NA	A0A1B1ISM1	uncultured_Mediterranean_phage	25.6	1.3e-30
WP_012666952.1|689251_689866_-	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	42.1	6.8e-34
WP_012666953.1|690595_690787_+	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	82.5	9.5e-19
WP_104945024.1|690922_692058_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	55.8	6.9e-80
WP_104945199.1|692639_692855_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	69.0	3.9e-21
WP_012666956.1|692835_693345_+	lysozyme	NA	E5G6N1	Salmonella_phage	71.4	3.0e-67
WP_012666957.1|693341_693764_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	68.6	5.5e-43
WP_012666958.1|694787_695315_-	phospholipase D family protein	NA	NA	NA	NA	NA
WP_014538548.1|696802_697018_+	Late control gene B protein (GpB)	NA	E5G6Q4	Salmonella_phage	74.6	2.0e-20
WP_012666960.1|697768_698215_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012666961.1|698857_700252_+	MHS family MFS transporter	NA	NA	NA	NA	NA
WP_012666962.1|700333_701350_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_012666963.1|701364_702351_+	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_012666964.1|702402_703821_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_012666965.1|703891_704332_-	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
WP_162013506.1|704374_704512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157861010.1|704641_704884_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012666967.1|705141_706347_+	MFS transporter	NA	NA	NA	NA	NA
WP_012666968.1|706512_707610_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_012666969.1|707855_708089_+	DUF1435 domain-containing protein	NA	NA	NA	NA	NA
WP_012666970.1|708576_709605_-	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	NA	NA	NA	NA	NA
WP_041474086.1|709774_710197_+	DNA polymerase III subunit psi	NA	NA	NA	NA	NA
WP_012666972.1|710159_710600_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_012666973.1|710614_711295_+	pyrimidine 5'-nucleotidase	NA	NA	NA	NA	NA
WP_081441620.1|712274_712778_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012666975.1|712802_713315_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_012666976.1|713334_714678_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_012666977.1|714695_715937_+	DotU family type VI secretion system protein	NA	NA	NA	NA	NA
WP_012666978.1|715940_719573_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_012666979.1|719589_720300_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_012666980.1|720317_721325_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_012666981.1|721387_721924_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_012666982.1|721927_723427_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_012666983.1|723423_723699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012666984.1|723970_724453_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_012666985.1|724507_724951_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012666986.1|724975_725713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071819841.1|725781_726174_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_104945142.1|726476_727127_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148217847.1|727762_727993_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012666988.1|728202_728604_+	DUF1311 domain-containing protein	NA	NA	NA	NA	NA
WP_012666989.1|728954_730775_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_012666990.1|730771_731566_+	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_012666991.1|731583_732552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012666992.1|732561_733383_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012666993.1|733379_733946_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_012666994.1|733964_735839_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_012666995.1|735835_736894_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 2
NC_012214	Erwinia pyrifoliae Ep1/96, complete genome	4026322	1606878	1613809	4026322		Tupanvirus(50.0%)	7	NA	NA
WP_012667718.1|1606878_1607775_+	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	40.3	6.2e-44
WP_012667719.1|1607829_1608843_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	45.0	4.1e-76
WP_012667720.1|1609236_1610307_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.4	1.3e-99
WP_012667721.1|1610308_1611175_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	66.7	1.3e-107
WP_012667722.1|1611293_1612229_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9L5H6	Tupanvirus	25.5	5.6e-19
WP_012667723.1|1612301_1613069_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_012667724.1|1613068_1613809_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	30.2	3.7e-10
>prophage 3
NC_012214	Erwinia pyrifoliae Ep1/96, complete genome	4026322	1978495	2005154	4026322	holin	Pseudoalteromonas_phage(15.0%)	38	NA	NA
WP_012668049.1|1978495_1980739_-	hypothetical protein	NA	H9C157	Pectobacterium_phage	35.3	1.2e-112
WP_012668050.1|1980740_1980995_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668051.1|1981077_1981353_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668053.1|1982147_1982549_-	helix-turn-helix domain-containing protein	NA	K7PM82	Enterobacteria_phage	50.0	3.3e-13
WP_012668054.1|1982632_1982836_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668055.1|1982832_1983300_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668056.1|1983296_1984205_+	hypothetical protein	NA	A0A248SL49	Klebsiella_phage	40.1	1.3e-52
WP_104945197.1|1984155_1984953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668058.1|1984954_1985197_+	hypothetical protein	NA	A0A1V0E8D1	Vibrio_phage	58.4	3.3e-16
WP_071819811.1|1985377_1985533_+	Hok/Gef family protein	NA	NA	NA	NA	NA
WP_012668060.1|1985880_1986078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668061.1|1986135_1986735_+	DUF1367 family protein	NA	A0A0U2RT94	Escherichia_phage	71.4	5.2e-79
WP_012668062.1|1986731_1987211_+	DUF1364 family protein	NA	E5AGG0	Erwinia_phage	74.5	4.8e-35
WP_012668063.1|1987210_1987897_+	antitermination protein	NA	I6PDF8	Cronobacter_phage	36.0	3.8e-25
WP_012668064.1|1988068_1988404_+|holin	phage holin, lambda family	holin	Q2A0C6	Sodalis_phage	43.3	1.2e-16
WP_012668065.1|1988407_1989031_+	glycoside hydrolase family 19 protein	NA	F1C591	Cronobacter_phage	60.4	2.1e-67
WP_012668066.1|1989027_1989435_+	DUF2570 family protein	NA	NA	NA	NA	NA
WP_012668068.1|1990233_1990578_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014538898.1|1990574_1991015_+	DUF4054 domain-containing protein	NA	NA	NA	NA	NA
WP_012668070.1|1991011_1991470_+	hypothetical protein	NA	A0A2H5BG34	Pseudoalteromonas_phage	30.9	1.9e-12
WP_012668071.1|1991469_1991838_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668072.1|1991827_1992343_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668073.1|1992357_1993845_+	DUF3383 domain-containing protein	NA	A0A088C3U1	Shewanella_sp._phage	36.1	9.9e-79
WP_012668074.1|1993855_1994308_+	hypothetical protein	NA	A1Z014	Burkholderia_virus	44.1	2.5e-25
WP_012668075.1|1994349_1994808_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668076.1|1994890_1996567_+	hypothetical protein	NA	A0A2H5BG44	Pseudoalteromonas_phage	28.9	1.1e-20
WP_012668077.1|1996563_1997073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668078.1|1997079_1997373_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668079.1|1997365_1998181_+	hypothetical protein	NA	Q6IWQ0	Burkholderia_phage	37.7	1.7e-43
WP_012668080.1|1998184_1998877_+	hypothetical protein	NA	A0A2H4P6V3	Pseudomonas_phage	35.3	6.3e-28
WP_012668081.1|1998873_1999218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668082.1|1999210_2000398_+	hypothetical protein	NA	A0A2H5BG53	Pseudoalteromonas_phage	38.7	2.6e-74
WP_012668083.1|2000394_2001048_+	DUF2612 domain-containing protein	NA	Q6IWQ4	Burkholderia_phage	40.5	2.3e-35
WP_012668084.1|2001051_2001987_+	phage related-protein	NA	A0A0F6R6B6	Escherichia_coli_O157_typing_phage	44.5	1.7e-28
WP_012668085.1|2002007_2003123_-	acyltransferase	NA	A0A2H4JA46	uncultured_Caudovirales_phage	31.8	1.4e-32
WP_012668087.1|2003831_2004677_-	acyltransferase	NA	NA	NA	NA	NA
WP_071819813.1|2004610_2004844_-	acyltransferase family protein	NA	NA	NA	NA	NA
WP_012668088.1|2004893_2005154_-	HicB family protein	NA	Q775F5	Haemophilus_virus	35.6	1.8e-15
>prophage 4
NC_012214	Erwinia pyrifoliae Ep1/96, complete genome	4026322	2224639	2330244	4026322	portal,terminase,tail,head,lysis,holin,transposase,integrase,plate,protease,tRNA,capsid	Salmonella_phage(22.22%)	114	2270771:2270785	2327632:2327646
WP_012668273.1|2224639_2225227_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_041474114.1|2225261_2225942_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_012668275.1|2226076_2227558_-	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	39.6	1.9e-90
WP_012668276.1|2227916_2229008_+	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
WP_012668277.1|2229360_2233515_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668279.1|2234346_2235552_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668280.1|2235821_2236973_-	IpaD/SipD/SspD family type III secretion system needle tip protein	NA	NA	NA	NA	NA
WP_012668281.1|2237038_2238040_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668282.1|2238080_2239982_-	type III secretion system translocon subunit SctE	NA	NA	NA	NA	NA
WP_012668283.1|2239978_2240536_-	SycD/LcrH family type III secretion system chaperone	NA	NA	NA	NA	NA
WP_012668284.1|2240690_2241782_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA	NA
WP_012668285.1|2241795_2242566_-	type III secretion system export apparatus subunit SctT	NA	NA	NA	NA	NA
WP_012668286.1|2242578_2242833_-	type III secretion system export apparatus subunit SctS	NA	NA	NA	NA	NA
WP_012668287.1|2242829_2243501_-	EscR/YscR/HrcR family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_012668288.1|2243490_2244417_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041474003.1|2244413_2245259_-	type III secretion system protein	NA	NA	NA	NA	NA
WP_041474004.1|2245239_2245710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668291.1|2245684_2246980_-	FliI/YscN family ATPase	NA	NA	NA	NA	NA
WP_012668292.1|2246996_2247404_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668293.1|2247393_2249469_-	EscV/YscV/HrcV family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
WP_012668294.1|2249510_2250626_-	invasion protein	NA	NA	NA	NA	NA
WP_012668295.1|2250638_2252405_-	EscC/YscC/HrcC family type III secretion system outer membrane ring protein	NA	NA	NA	NA	NA
WP_012668296.1|2252397_2253264_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_012668297.1|2253622_2254909_+	type III secretion system protein	NA	NA	NA	NA	NA
WP_014539007.1|2254886_2255159_+	type III secretion system needle filament subunit SctF	NA	NA	NA	NA	NA
WP_012668299.1|2255202_2255526_+	type III secretion system inner rod subunit SctI	NA	NA	NA	NA	NA
WP_012668300.1|2255525_2256287_+	type III secretion inner membrane ring lipoprotein SctJ	NA	NA	NA	NA	NA
WP_012668301.1|2256291_2256846_+	oxidoreductase	NA	NA	NA	NA	NA
WP_012668302.1|2256826_2257516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668303.1|2257502_2257868_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049779061.1|2258197_2258830_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_012668305.1|2260192_2260438_+	hypothetical protein	NA	NA	NA	NA	NA
WP_104944977.1|2261072_2262223_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.4	1.1e-48
WP_012668307.1|2262724_2262958_+	YgdI/YgdR family lipoprotein	NA	NA	NA	NA	NA
WP_012668308.1|2262973_2263204_+	YgdI/YgdR family lipoprotein	NA	NA	NA	NA	NA
WP_012668309.1|2263561_2265202_+	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA	NA
WP_012668310.1|2265198_2265918_+	two-component system response regulator DcuR	NA	NA	NA	NA	NA
WP_012668311.1|2265898_2266867_-	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_012668312.1|2266940_2269718_-	flavocytochrome c	NA	A0A2P0ZL82	Lactobacillus_phage	30.9	1.8e-65
WP_012668313.1|2270295_2271807_+	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
2270771:2270785	attL	ATGCCATCACCTTCG	NA	NA	NA	NA
WP_012668314.1|2271988_2273635_+	fumarate hydratase	NA	NA	NA	NA	NA
WP_012668315.1|2274064_2274328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668316.1|2274464_2275394_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_012668317.1|2275676_2277353_+	alpha,alpha-trehalase TreA	NA	NA	NA	NA	NA
WP_012668318.1|2277439_2277688_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
WP_012668319.1|2278346_2278982_-	membrane-bound lytic murein transglycosylase EmtA	NA	NA	NA	NA	NA
WP_012668320.1|2279176_2280121_+	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
WP_012668321.1|2280117_2280792_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_012668322.1|2281093_2281339_+	DinI family protein	NA	K7PKR6	Enterobacteria_phage	68.8	2.5e-24
WP_014544100.1|2281838_2282129_-|holin	phage holin family protein	holin	K7PKN9	Enterobacterial_phage	48.9	8.8e-16
WP_012668324.1|2282115_2282496_-|holin	holin	holin	F1C592	Cronobacter_phage	57.9	2.2e-30
WP_012668325.1|2282869_2283790_+	exopolysaccharide protein, Mig-14 family	NA	NA	NA	NA	NA
WP_104945024.1|2283911_2285046_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	55.8	6.9e-80
WP_012668326.1|2286274_2287111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668327.1|2287231_2287792_-|tail	tail fiber assembly protein	tail	F1BUK2	Cronobacter_phage	44.2	1.2e-29
WP_012668328.1|2287788_2288751_-	hypothetical protein	NA	Q8HAB4	Salmonella_phage	57.7	1.4e-25
WP_012668329.1|2288743_2289325_-	DUF2313 domain-containing protein	NA	A0A192Y5V3	Salmonella_phage	78.8	6.8e-92
WP_012668330.1|2289327_2290401_-|plate	baseplate J/gp47 family protein	plate	A0A192Y6E4	Salmonella_phage	71.0	8.0e-147
WP_012668331.1|2290393_2290807_-	phage GP46 family protein	NA	A0A192Y6D0	Salmonella_phage	68.6	4.6e-50
WP_012668332.1|2290806_2291343_-|plate	phage baseplate assembly protein	plate	U5P081	Shigella_phage	49.4	3.2e-35
WP_012668333.1|2291342_2292419_-|plate	baseplate protein	plate	U5P0H6	Shigella_phage	70.0	1.1e-146
WP_012668334.1|2292415_2293717_-	DNA circularization N-terminal domain-containing protein	NA	Q8SBG8	Shigella_phage	58.9	2.2e-143
WP_012668335.1|2293752_2295660_-|tail	phage tail tape measure protein	tail	U5P420	Shigella_phage	56.3	4.0e-181
WP_012668336.1|2295744_2296068_-|tail	phage tail assembly protein	tail	Q8HAC3	Salmonella_phage	56.1	5.7e-24
WP_012668337.1|2296064_2296421_-	hypothetical protein	NA	Q8W622	Enterobacteria_phage	81.4	1.8e-50
WP_012668338.1|2296420_2297917_-|tail	tail sheath protein	tail	Q8HAC5	Salmonella_phage	68.3	4.2e-194
WP_012668339.1|2297916_2298096_-	DUF2635 domain-containing protein	NA	Q8SBH3	Shigella_phage	58.2	4.0e-11
WP_012668340.1|2298099_2298660_-	hypothetical protein	NA	A0A192Y5U4	Salmonella_phage	67.2	2.1e-69
WP_012668341.1|2298656_2299163_-	hypothetical protein	NA	Q8HAC8	Salmonella_phage	78.3	4.4e-71
WP_012668342.1|2299155_2299545_-|head	phage head closure protein	head	U5P0R0	Shigella_phage	58.1	1.8e-35
WP_012668343.1|2299546_2299876_-|head,tail	phage gp6-like head-tail connector protein	head,tail	Q8SBH7	Shigella_phage	51.9	5.0e-23
WP_148217836.1|2299885_2300302_-	hypothetical protein	NA	K7PHI6	Enterobacteria_phage	68.4	2.4e-06
WP_012668345.1|2300343_2301561_-|capsid	phage major capsid protein	capsid	K7PM57	Enterobacteria_phage	80.2	3.7e-180
WP_012668346.1|2301570_2302419_-|protease	Clp protease ClpP	protease	K7PH05	Enterobacteria_phage	68.0	5.3e-101
WP_012668347.1|2302430_2303735_-|portal	phage portal protein	portal	K7PJU5	Enterobacteria_phage	74.7	1.1e-190
WP_014539025.1|2303734_2305480_-|terminase	terminase large subunit	terminase	M4QNU0	Tetraselmis_viridis_virus	43.5	1.1e-132
WP_012668349.1|2305433_2305901_-|terminase	phage terminase small subunit P27 family	terminase	Q9B019	Phage_GMSE-1	58.4	5.5e-44
WP_014539028.1|2306222_2306573_-	HNH endonuclease	NA	F1C587	Cronobacter_phage	67.3	2.8e-40
WP_081441639.1|2306550_2307066_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	53.3	5.0e-22
WP_041474005.1|2307110_2307530_-	structural protein	NA	X2KPC6	Enterobacteria_phage	53.2	1.2e-37
WP_012668353.1|2307510_2307858_-|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	66.4	2.7e-35
WP_041474006.1|2308016_2308199_+	type II toxin-antitoxin system HicA family toxin	NA	A0A0D4DC32	Acinetobacter_phage	54.2	1.8e-11
WP_012668354.1|2308254_2308668_+	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0D4DCG1	Acinetobacter_phage	35.6	1.9e-16
WP_012668355.1|2308722_2309781_-	site-specific DNA-methyltransferase	NA	Q6UAT0	Klebsiella_phage	68.7	1.5e-113
WP_012668356.1|2309929_2310130_-	hypothetical protein	NA	A0A291AWX6	Escherichia_phage	42.4	3.7e-05
WP_012668357.1|2310366_2311182_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668358.1|2311187_2311481_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668359.1|2311516_2311888_-	antitermination protein	NA	U5P0A5	Shigella_phage	55.4	8.6e-32
WP_012668360.1|2311880_2312957_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	62.8	7.1e-127
WP_012668361.1|2312953_2313835_-	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	72.0	9.9e-127
WP_012668362.1|2313828_2314281_-	PerC family transcriptional regulator	NA	NA	NA	NA	NA
WP_012668363.1|2314277_2315330_-	helix-turn-helix domain-containing protein	NA	H9C164	Pectobacterium_phage	39.0	9.0e-34
WP_012668364.1|2315326_2315509_-	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
WP_012668365.1|2315505_2316318_-	hypothetical protein	NA	A0A248SL11	Klebsiella_phage	46.2	2.6e-41
WP_012668366.1|2316314_2316506_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668367.1|2316570_2317035_-	hypothetical protein	NA	K7PJS5	Enterobacterial_phage	71.5	3.3e-57
WP_012668368.1|2317054_2317279_-	transcriptional regulator	NA	A0A0N7C1T6	Escherichia_phage	50.0	6.2e-09
WP_012668369.1|2317385_2317976_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_049779063.1|2318871_2319111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012668371.1|2319088_2319322_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012668372.1|2319626_2319998_+	hypothetical protein	NA	Q8HAA1	Salmonella_phage	87.8	1.5e-55
WP_012668373.1|2320057_2320885_+	DUF2303 family protein	NA	Q8HAA2	Salmonella_phage	88.7	2.9e-136
WP_012668374.1|2321017_2321548_+	hypothetical protein	NA	K7PKJ9	Enterobacteria_phage	62.6	3.2e-56
WP_012668375.1|2321540_2321984_+	hypothetical protein	NA	Q7Y3W7	Yersinia_phage	61.7	1.8e-36
WP_014539038.1|2321958_2322636_+	hypothetical protein	NA	A0A077KCB2	Edwardsiella_phage	53.7	1.5e-69
WP_081441640.1|2322746_2323022_+	DUF551 domain-containing protein	NA	K7PH61	Enterobacteria_phage	62.9	3.3e-20
WP_012668378.1|2323018_2323588_+	3'-5' exoribonuclease	NA	K7PLW7	Enterobacteria_phage	77.2	3.5e-85
WP_041474008.1|2323630_2323876_+	excisionase	NA	NA	NA	NA	NA
WP_012668379.1|2323856_2324984_+|integrase	tyrosine-type recombinase/integrase	integrase	O21925	Phage_21	58.4	2.7e-121
WP_012668380.1|2325017_2326385_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_012668381.1|2326490_2327741_-	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	88.9	9.7e-19
2327632:2327646	attR	ATGCCATCACCTTCG	NA	NA	NA	NA
WP_012668382.1|2327844_2328501_+	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_012668383.1|2328548_2329025_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_012668384.1|2329134_2330244_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
>prophage 5
NC_012214	Erwinia pyrifoliae Ep1/96, complete genome	4026322	2887225	2894483	4026322	protease	Bacillus_virus(33.33%)	6	NA	NA
WP_012668875.1|2887225_2887498_-	transcriptional regulator	NA	A3E2K9	Sodalis_phage	51.1	8.0e-19
WP_012668876.1|2887689_2890044_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	53.3	6.5e-226
WP_012668877.1|2890233_2891508_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	55.6	1.6e-130
WP_012668878.1|2891820_2892417_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A248SJ97	Salicola_phage	36.8	2.1e-27
WP_012668879.1|2892489_2893764_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	55.4	2.8e-130
WP_012668880.1|2893859_2894483_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	61.5	5.4e-63
>prophage 6
NC_012214	Erwinia pyrifoliae Ep1/96, complete genome	4026322	3452249	3460758	4026322		Brevibacillus_phage(33.33%)	9	NA	NA
WP_012667450.1|3452249_3453320_+	site-specific tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	23.0	8.9e-13
WP_012667449.1|3453345_3454104_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012669373.1|3454610_3455063_+	SMI1/KNR4 family protein	NA	NA	NA	NA	NA
WP_012669374.1|3455122_3455425_-	type I addiction module toxin, SymE family	NA	NA	NA	NA	NA
WP_012669375.1|3455503_3455905_-	helix-turn-helix domain-containing protein	NA	A0A0A7AQV8	Bacillus_phage	33.7	1.8e-06
WP_012669376.1|3456017_3458711_+	toprim domain-containing protein	NA	A0A1S5RF71	Helicobacter_phage	24.8	7.7e-21
WP_012669377.1|3458925_3459981_+	site-specific tyrosine recombinase XerC	NA	A0A0K2CP59	Brevibacillus_phage	27.3	2.7e-14
WP_012669378.1|3460241_3460484_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	47.5	1.1e-14
WP_012669379.1|3460473_3460758_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	69.1	1.4e-29
>prophage 7
NC_012214	Erwinia pyrifoliae Ep1/96, complete genome	4026322	3483405	3505347	4026322	transposase	uncultured_virus(80.0%)	20	NA	NA
WP_012666458.1|3483405_3484446_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_012669399.1|3484570_3485923_+	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_012669401.1|3486604_3489406_-	conjugative transfer ATPase	NA	NA	NA	NA	NA
WP_041474143.1|3489405_3489804_-	TIGR03751 family conjugal transfer lipoprotein	NA	NA	NA	NA	NA
WP_012669402.1|3489839_3491357_-	TIGR03752 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_012669263.1|3491356_3492220_-	TIGR03749 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_012669264.1|3492216_3492876_-	TIGR03746 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_012669265.1|3492872_3493247_-	TIGR03750 family conjugal transfer protein	NA	NA	NA	NA	NA
WP_012669266.1|3493256_3493616_-	TIGR03745 family integrating conjugative element membrane protein	NA	NA	NA	NA	NA
WP_004168502.1|3493628_3493874_-	TIGR03758 family integrating conjugative element protein	NA	NA	NA	NA	NA
WP_004168501.1|3493864_3494185_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012669403.1|3494326_3494632_-	DUF1493 family protein	NA	NA	NA	NA	NA
WP_012669404.1|3494625_3495090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012669405.1|3495559_3496090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012669406.1|3496146_3497310_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	51.2	4.2e-48
WP_012669407.1|3497366_3498575_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.3	1.9e-51
WP_012669407.1|3499392_3500601_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.3	1.9e-51
WP_012669409.1|3500719_3500944_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104944977.1|3501673_3502823_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.4	1.1e-48
WP_012669415.1|3504138_3505347_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.3	2.4e-51
>prophage 8
NC_012214	Erwinia pyrifoliae Ep1/96, complete genome	4026322	3835329	3898435	4026322	protease,integrase,transposase	Liberibacter_phage(10.0%)	48	3834544:3834559	3861383:3861398
3834544:3834559	attL	CCGCCGCCAGCGCGCT	NA	NA	NA	NA
WP_014539804.1|3835329_3836151_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_014539807.1|3838529_3841220_-	hypothetical protein	NA	NA	NA	NA	NA
WP_014539808.1|3841599_3842442_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_015899152.1|3842546_3843461_-	ribonuclease Z	NA	NA	NA	NA	NA
WP_014539810.1|3843480_3846531_-	type I restriction endonuclease subunit R	NA	NA	NA	NA	NA
WP_014539811.1|3846587_3847490_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_012666458.1|3847620_3848661_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_014539812.1|3849021_3851403_-	SAM-dependent DNA methyltransferase	NA	A0A220A2U4	Liberibacter_phage	28.5	4.5e-25
WP_015899154.1|3851757_3853113_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.5	2.3e-37
WP_014539814.1|3853896_3854718_+	alpha/beta hydrolase	NA	A0A1J0GVH7	Mycobacterium_phage	30.1	2.7e-17
WP_148217846.1|3855371_3855800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014539816.1|3855757_3856282_-	cytochrome b561	NA	NA	NA	NA	NA
WP_157861022.1|3857102_3857375_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015899156.1|3857375_3857681_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_014539820.1|3857677_3857962_-	DNA-damage-inducible protein J	NA	NA	NA	NA	NA
WP_015899158.1|3857933_3858641_-|integrase	tyrosine-type recombinase/integrase	integrase	S5W9T9	Leptospira_phage	31.0	1.0e-09
WP_014539822.1|3858663_3858855_+	type I toxin-antitoxin system SymE family toxin	NA	NA	NA	NA	NA
WP_014539823.1|3859112_3861179_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	34.3	4.4e-32
WP_015899161.1|3863121_3864084_-	oxidoreductase	NA	NA	NA	NA	NA
3861383:3861398	attR	CCGCCGCCAGCGCGCT	NA	NA	NA	NA
WP_015899162.1|3864092_3865127_-	molybdenum cofactor-independent xanthine hydroxylase subunit HpxD	NA	NA	NA	NA	NA
WP_014539828.1|3865248_3866163_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_081441643.1|3866194_3867049_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_014542734.1|3867450_3867948_-	TIGR00645 family protein	NA	NA	NA	NA	NA
WP_014539833.1|3869227_3870502_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_014539834.1|3870494_3872594_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	26.5	9.5e-35
WP_014539835.1|3873030_3873771_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_014539836.1|3873767_3874544_-	phospholipase	NA	NA	NA	NA	NA
WP_014539837.1|3874582_3875485_-	siderophore-interacting protein	NA	NA	NA	NA	NA
WP_015899165.1|3875670_3876798_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_014539842.1|3878906_3879218_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014539843.1|3879245_3880421_+	HNH endonuclease	NA	G0X580	Salmonella_phage	46.3	4.4e-21
WP_014539844.1|3880693_3881710_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_014539845.1|3881722_3882301_-	hypothetical protein	NA	NA	NA	NA	NA
WP_104944977.1|3882469_3883620_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	40.4	1.1e-48
WP_104945181.1|3884516_3884891_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014539848.1|3885195_3887895_-	two-component system sensor histidine kinase KdbD	NA	NA	NA	NA	NA
WP_014539849.1|3887904_3888477_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
WP_014539850.1|3888488_3890537_-	potassium-transporting ATPase subunit KdpB	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	24.0	3.0e-25
WP_014539851.1|3890555_3892241_-	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
WP_004163493.1|3892240_3892330_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_014539854.1|3893051_3893249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015899169.1|3893555_3894248_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049779068.1|3894524_3894614_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
WP_015899171.1|3894833_3896042_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.3	1.9e-51
WP_014539858.1|3896368_3896764_+	polyketide cyclase	NA	NA	NA	NA	NA
WP_014539859.1|3896812_3897733_+	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_014539860.1|3897922_3898156_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
WP_015899173.1|3898186_3898435_-|protease	AprI/Inh family metalloprotease inhibitor	protease	NA	NA	NA	NA
>prophage 1
NC_013263	Erwinia pyrifoliae Ep1/96 plasmid pEP36, complete sequence	35909	0	5481	35909	transposase	Enterobacteria_phage(66.67%)	3	NA	NA
WP_012814633.1|748_1330_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	47.8	1.6e-40
WP_012814634.1|1490_4487_+|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	63.9	0.0e+00
WP_011078067.1|4500_5481_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	1.4e-25
>prophage 2
NC_013263	Erwinia pyrifoliae Ep1/96 plasmid pEP36, complete sequence	35909	8611	12597	35909	holin	Vibrio_phage(50.0%)	3	NA	NA
WP_011114006.1|8611_10642_+|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	28.8	4.9e-20
WP_041473951.1|11026_11686_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_012814636.1|12012_12597_-	recombinase family protein	NA	A0A219YA40	Aeromonas_phage	35.5	6.1e-24
>prophage 3
NC_013263	Erwinia pyrifoliae Ep1/96 plasmid pEP36, complete sequence	35909	16637	20425	35909		uncultured_Caudovirales_phage(100.0%)	5	NA	NA
WP_011078058.1|16637_16925_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	51.1	5.5e-18
WP_011078079.1|17084_17369_+	DUF2132 domain-containing protein	NA	NA	NA	NA	NA
WP_041473956.1|17632_17947_+	toxin RelE	NA	NA	NA	NA	NA
WP_011113999.1|17947_18361_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_041473953.1|18868_20425_+	cellobiose phosphorylase	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.4	2.7e-10
>prophage 4
NC_013263	Erwinia pyrifoliae Ep1/96 plasmid pEP36, complete sequence	35909	26624	31761	35909	transposase	uncultured_virus(25.0%)	5	NA	NA
WP_012814645.1|26624_27833_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	49.2	1.2e-50
WP_014539990.1|28083_28425_-|transposase	transposase	transposase	Q9ZXG3	Shigella_phage	78.6	7.4e-06
WP_011078049.1|28702_29680_-	replication initiation protein	NA	A0A222YYK1	Escherichia_phage	28.9	7.8e-24
WP_014540014.1|30925_31138_-	chromosome partitioning protein ParB	NA	NA	NA	NA	NA
WP_011078071.1|31134_31761_-	AAA family ATPase	NA	D4HTX7	Vibrio_phage	36.4	5.7e-28
