assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000027165.1_ASM2716v1	NC_013853	Streptococcus mitis B6, complete genome	1	879374-879547	1	CRISPRCasFinder	no	DinG	cas3,csa3,DEDDh,PrimPol,DinG,WYL,RT	Type IV-A	AACTTCTAAAACTAACTTCCAGTTT	25	1	43	879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522|879474-879522	NC_013853.1_113444-113396|NC_013853.1_149705-149657|NC_013853.1_1147971-1147923|NC_013853.1_1159142-1159094|NC_013853.1_1416650-1416602|NC_013853.1_1517969-1517921|NC_013853.1_1891620-1891572|NC_013853.1_1893178-1893130|NC_013853.1_2009359-2009311|NC_013853.1_39938-39986|NC_013853.1_390683-390731|NC_013853.1_611296-611344|NC_013853.1_697281-697329|NC_013853.1_736836-736884|NC_013853.1_738392-738440|NC_013853.1_739948-739996|NC_013853.1_741504-741552|NC_013853.1_813040-813088|NC_013853.1_882361-882409|NC_013853.1_943722-943770|NC_013853.1_1297206-1297254|NC_013853.1_1051611-1051563|NC_013853.1_1070584-1070536|NC_013853.1_1412226-1412178|NC_013853.1_1425692-1425644|NC_013853.1_1536875-1536827|NC_013853.1_1855088-1855040|NC_013853.1_1930279-1930231|NC_013853.1_1964164-1964116|NC_013853.1_2017999-2017951|NC_013853.1_14787-14835|NC_013853.1_29343-29391|NC_013853.1_201054-201102|NC_013853.1_233844-233892|NC_013853.1_237013-237061|NC_013853.1_248927-248975|NC_013853.1_296607-296655|NC_013853.1_459088-459136|NC_013853.1_560837-560885|NC_013853.1_562393-562441|NC_013853.1_635227-635275|NC_013853.1_914823-914871|NC_013853.1_945278-945326	NA	2	2	Orphan	cas3,csa3,DEDDh,PrimPol,DinG,WYL,RT	NA,NA	NA|257aa|up_9|NC_013853.1_867855_868626_+	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|421aa|up_8|NC_013853.1_868653_869916_+	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|409aa|up_7|NC_013853.1_869926_871153_+	TIGR01979, Probable_cysteine_desulfurase, cysteine desulfurases, SufSfamily	NA|143aa|up_6|NC_013853.1_871139_871568_+	TIGR01994, Iron-sulfur_cluster_assembly_scaffold_protein_IscU, SUF system FeS assembly protein, NifU family	NA|471aa|up_5|NC_013853.1_871637_873050_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|414aa|up_4|NC_013853.1_873134_874376_-	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane]	NA|370aa|up_3|NC_013853.1_874478_875588_+	pfam01594, AI-2E_transport, AI-2E family transporter	NA|399aa|up_2|NC_013853.1_875793_876990_+	PRK00049, PRK00049, elongation factor Tu; Reviewed	DinG|361aa|up_1|NC_013853.1_877244_878327_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|326aa|up_0|NC_013853.1_878323_879301_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|389aa|down_0|NC_013853.1_879714_880881_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|105aa|down_1|NC_013853.1_881196_881511_+	PRK05573, rplU, 50S ribosomal protein L21; Validated	NA|115aa|down_2|NC_013853.1_881526_881871_+	COG2868, COG2868, Predicted ribosomal protein [Translation, ribosomal structure and biogenesis]	NA|98aa|down_3|NC_013853.1_881887_882181_+	PRK05435, rpmA, 50S ribosomal protein L27; Validated	NA|389aa|down_4|NC_013853.1_882601_883768_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|303aa|down_5|NC_013853.1_883967_884876_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|154aa|down_6|NC_013853.1_884872_885334_+	PRK14797, PRK14797, lipoprotein signal peptidase; Provisional	NA|296aa|down_7|NC_013853.1_885323_886211_+	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|628aa|down_8|NC_013853.1_887395_889279_+	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only]	NA|377aa|down_9|NC_013853.1_889358_890489_+	COG0263, ProB, Glutamate 5-kinase [Amino acid transport and metabolism]
GCF_000027165.1_ASM2716v1	NC_013853	Streptococcus mitis B6, complete genome	2	1297103-1297205	2	CRISPRCasFinder	no	DEDDh	cas3,csa3,DEDDh,PrimPol,DinG,WYL,RT	Unclear	GGTAACTTCTAAAACTAACTTCCAGTTT	28	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,PrimPol,DinG,WYL,RT	NA,NA	NA|281aa|up_9|NC_013853.1_1286555_1287398_+	COG2035, COG2035, Predicted membrane protein [Function unknown]	NA|162aa|up_8|NC_013853.1_1287397_1287883_+	cd00002, YbaK_deacylase, This CD includes cysteinyl-tRNA(Pro) deacylases from Haemophilus influenzae and Escherichia coli and other related bacterial proteins	NA|206aa|up_7|NC_013853.1_1287879_1288497_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|497aa|up_6|NC_013853.1_1288735_1290226_+	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed	NA|280aa|up_5|NC_013853.1_1290287_1291127_-	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily	NA|210aa|up_4|NC_013853.1_1291136_1291766_-	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|214aa|up_3|NC_013853.1_1291775_1292417_-	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|410aa|up_2|NC_013853.1_1292556_1293786_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|389aa|up_1|NC_013853.1_1293775_1294942_-	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only]	NA|661aa|up_0|NC_013853.1_1295059_1297042_-	cd08504, PBP2_OppA, The substrate-binding component of an ABC-type oligopetide import system contains the type 2 periplasmic binding fold	NA|389aa|down_0|NC_013853.1_1297446_1298613_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|338aa|down_1|NC_013853.1_1298814_1299828_+	COG2706, COG2706, 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]	NA|200aa|down_2|NC_013853.1_1299932_1300532_+	COG3464, COG3464, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|2475aa|down_3|NC_013853.1_1300610_1308035_-	PTZ00121, PTZ00121, MAEBL; Provisional	NA|140aa|down_4|NC_013853.1_1309147_1309567_-	PRK00571, atpC, F0F1 ATP synthase subunit epsilon; Validated	NA|469aa|down_5|NC_013853.1_1309577_1310984_-	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|293aa|down_6|NC_013853.1_1311069_1311948_-	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|502aa|down_7|NC_013853.1_1311963_1313469_-	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|179aa|down_8|NC_013853.1_1313483_1314020_-	PRK05758, PRK05758, F0F1 ATP synthase subunit delta; Validated	NA|165aa|down_9|NC_013853.1_1314019_1314514_-	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated
GCF_000027165.1_ASM2716v1	NC_013853	Streptococcus mitis B6, complete genome	3	2038341-2038436	3	CRISPRCasFinder	no		cas3,csa3,DEDDh,PrimPol,DinG,WYL,RT	Orphan	TTATATATAAAAATTTTACACATT	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,PrimPol,DinG,WYL,RT	NA|264aa|up_9|NC_013853.1_2028190_2028982_-,NA|134aa|up_8|NC_013853.1_2029055_2029457_-,NA|355aa|down_3|NC_013853.1_2040321_2041386_+	NA|264aa|up_9|NC_013853.1_2028190_2028982_-	NA	NA|134aa|up_8|NC_013853.1_2029055_2029457_-	NA	NA|288aa|up_7|NC_013853.1_2029985_2030849_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|207aa|up_6|NC_013853.1_2030900_2031521_-	cd00118, LysM, Lysin Motif is a small domain involved in binding peptidoglycan	NA|224aa|up_5|NC_013853.1_2031761_2032433_+	COG1760, SdaA, L-serine deaminase [Amino acid transport and metabolism]	NA|291aa|up_4|NC_013853.1_2032441_2033314_+	TIGR00718, Probable_L-serine_dehydratase_alpha_chain, L-serine dehydratase, iron-sulfur-dependent, alpha subunit	NA|211aa|up_3|NC_013853.1_2033335_2033968_+	cd04302, HAD_5NT, haloacid dehalogenase (HAD)-like 5'-nucleotidases similar to the Pseudomonas aeruginosa PA0065	NA|617aa|up_2|NC_013853.1_2034074_2035925_-	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|277aa|up_1|NC_013853.1_2036163_2036994_-	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	NA|389aa|up_0|NC_013853.1_2037148_2038315_+	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters	NA|109aa|down_0|NC_013853.1_2038453_2038780_+	COG1695, COG1695, Predicted transcriptional regulators [Transcription]	NA|198aa|down_1|NC_013853.1_2038766_2039360_+	COG4709, COG4709, Predicted membrane protein [Function unknown]	NA|304aa|down_2|NC_013853.1_2039352_2040264_+	pfam13349, DUF4097, Putative adhesin	NA|355aa|down_3|NC_013853.1_2040321_2041386_+	NA	NA|287aa|down_4|NC_013853.1_2041455_2042316_-	pfam14132, DUF4299, Domain of unknown function (DUF4299)	NA|329aa|down_5|NC_013853.1_2042544_2043531_-	PRK00142, PRK00142, rhodanese-related sulfurtransferase	NA|99aa|down_6|NC_013853.1_2043662_2043959_-	pfam08951, EntA_Immun, Enterocin A Immunity	NA|230aa|down_7|NC_013853.1_2044026_2044716_-	pfam02517, Abi, CAAX protease self-immunity	NA|494aa|down_8|NC_013853.1_2045053_2046535_-	pfam12010, DUF3502, Domain of unknown function (DUF3502)	NA|308aa|down_9|NC_013853.1_2046791_2047715_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]
GCF_000027165.1_ASM2716v1	NC_013853	Streptococcus mitis B6, complete genome	4	2065610-2065688	4	CRISPRCasFinder	no		cas3,csa3,DEDDh,PrimPol,DinG,WYL,RT	Orphan	TGGAATTTACTTAGAAAATAAAAA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,DEDDh,PrimPol,DinG,WYL,RT	NA|49aa|up_9|NC_013853.1_2061797_2061944_-,NA|92aa|up_8|NC_013853.1_2061936_2062212_-,NA|114aa|up_7|NC_013853.1_2062204_2062546_-,NA|98aa|up_6|NC_013853.1_2062526_2062820_-,NA|72aa|up_5|NC_013853.1_2062816_2063032_-,NA|67aa|up_4|NC_013853.1_2063033_2063234_-,NA|144aa|up_3|NC_013853.1_2063230_2063662_-,NA	NA|49aa|up_9|NC_013853.1_2061797_2061944_-	NA	NA|92aa|up_8|NC_013853.1_2061936_2062212_-	NA	NA|114aa|up_7|NC_013853.1_2062204_2062546_-	NA	NA|98aa|up_6|NC_013853.1_2062526_2062820_-	NA	NA|72aa|up_5|NC_013853.1_2062816_2063032_-	NA	NA|67aa|up_4|NC_013853.1_2063033_2063234_-	NA	NA|144aa|up_3|NC_013853.1_2063230_2063662_-	NA	NA|209aa|up_2|NC_013853.1_2064096_2064723_-	COG3646, COG3646, Uncharacterized phage-encoded protein [Function unknown]	NA|67aa|up_1|NC_013853.1_2064737_2064938_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|142aa|up_0|NC_013853.1_2065143_2065569_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|489aa|down_0|NC_013853.1_2065690_2067157_+	COG2865, COG2865, Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen [Transcription]	NA|389aa|down_1|NC_013853.1_2067274_2068441_+	cd01189, INT_ICEBs1_C_like, C-terminal catalytic domain of integrases from bacterial phages and conjugate transposons	NA|695aa|down_2|NC_013853.1_2068632_2070717_+	COG3537, COG3537, Putative alpha-1,2-mannosidase [Carbohydrate transport and metabolism]	NA|561aa|down_3|NC_013853.1_2070762_2072445_-	COG3669, COG3669, Alpha-L-fucosidase [Carbohydrate transport and metabolism]	NA|434aa|down_4|NC_013853.1_2072446_2073748_-	pfam07532, Big_4, Bacterial Ig-like domain (group 4)	NA|822aa|down_5|NC_013853.1_2073771_2076237_-	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]	NA|295aa|down_6|NC_013853.1_2076420_2077305_-	cd03407, SPFH_like_u4, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|502aa|down_7|NC_013853.1_2079039_2080545_-	cd01017, AdcA, Metal binding protein AdcA	NA|269aa|down_8|NC_013853.1_2080554_2081361_-	pfam00950, ABC-3, ABC 3 transport family	NA|235aa|down_9|NC_013853.1_2081353_2082058_-	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
