The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	364950	408363	4879400	protease,terminase,coat,portal,integrase,lysis	Salmonella_virus(67.74%)	62	355720:355736	417624:417640
355720:355736	attL	GATATTGAAATTCGCGT	NA	NA	NA	NA
WP_001043675.1|364950_366003_-	phosphoporin PhoE	NA	Q1MVN1	Enterobacteria_phage	58.5	1.7e-112
WP_001285275.1|366285_367389_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	39.8	6.9e-61
WP_000893231.1|367400_368651_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	47.5	1.6e-98
WP_000051899.1|368856_370020_-|integrase	site-specific integrase	integrase	A0A192Y6Q1	Salmonella_phage	99.7	4.1e-229
WP_128190834.1|370257_370854_-	hypothetical protein	NA	A0A1R3Y5P7	Salmonella_virus	100.0	3.2e-113
WP_000002128.1|370922_371207_-	ASCH domain-containing protein	NA	A0A1R3Y5R3	Salmonella_virus	100.0	4.1e-50
WP_000208072.1|371199_372165_-	DUF550 domain-containing protein	NA	A0A1R3Y5Q8	Salmonella_virus	100.0	2.9e-172
WP_000582225.1|372175_372931_-	hypothetical protein	NA	A0A1R3Y5Q7	Salmonella_virus	100.0	2.9e-151
WP_001017880.1|372930_373575_-	ead/Ea22-like family protein	NA	A0A1R3Y5T1	Salmonella_virus	100.0	2.3e-117
WP_000665854.1|373571_373982_-	hypothetical protein	NA	A0A1R3Y5S0	Salmonella_virus	100.0	5.9e-74
WP_001214771.1|373978_374149_-	DUF2737 family protein	NA	A0A220NQV6	Salmonella_phage	100.0	6.1e-25
WP_001111312.1|374159_374453_-	DUF2856 family protein	NA	A0A1R3Y5T7	Salmonella_virus	100.0	3.2e-50
WP_001046981.1|374783_375491_-	recombinase	NA	A0A1R3Y600	Salmonella_virus	100.0	4.1e-139
WP_000902087.1|375487_375631_-	hypothetical protein	NA	A0A1R3Y5R4	Salmonella_virus	100.0	2.4e-19
WP_000156730.1|375620_375809_-	DUF5444 family protein	NA	A0A1R3Y5S5	Salmonella_virus	100.0	1.6e-31
WP_001200113.1|375789_375942_-|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	A0A1R3Y5R2	Salmonella_virus	100.0	2.7e-24
WP_014343793.1|376265_376565_-	hypothetical protein	NA	A0A1R3Y5U4	Salmonella_virus	100.0	2.3e-51
WP_000246164.1|376604_376805_-	Restriction inhibitor protein ral	NA	A0A1R3Y5S4	Salmonella_virus	100.0	1.0e-31
WP_000216172.1|376883_377216_-	hypothetical protein	NA	A0A1R3Y5R1	Salmonella_virus	100.0	2.2e-55
WP_000786969.1|377579_377789_+	fumarate hydratase FumD	NA	I6R0R9	Salmonella_phage	91.3	5.5e-28
WP_000248006.1|377824_378748_-	hypothetical protein	NA	A0A1R3Y6Z6	Salmonella_virus	100.0	1.5e-181
WP_000712403.1|378836_379526_-	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	100.0	1.3e-126
WP_000182204.1|379636_379852_+	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	100.0	1.3e-32
WP_001103492.1|379962_380244_+	hypothetical protein	NA	Q76H54	Enterobacteria_phage	100.0	4.3e-44
WP_001125981.1|380278_380425_+	DUF2740 family protein	NA	A0A075B8K7	Enterobacteria_phage	100.0	1.5e-19
WP_000067074.1|380417_381251_+	replication protein	NA	A0A1R3Y5R9	Salmonella_virus	100.0	3.8e-152
WP_001248408.1|381247_382624_+	AAA family ATPase	NA	A0A1R3Y5T0	Salmonella_virus	100.0	1.5e-254
WP_001036040.1|382620_382890_+	hypothetical protein	NA	A0A1R3Y5U7	Salmonella_virus	100.0	6.4e-45
WP_000654039.1|382961_383234_+	DUF4752 family protein	NA	A0A1R3Y5T8	Salmonella_virus	100.0	7.2e-44
WP_024132439.1|383464_383758_+	hypothetical protein	NA	A0A1R3Y5V7	Salmonella_virus	100.0	1.2e-47
WP_001277267.1|383760_383949_+	hypothetical protein	NA	A0A1R3Y6Z7	Salmonella_virus	100.0	4.2e-27
WP_000815503.1|383905_384352_+	recombination protein NinB	NA	A0A1R3Y605	Salmonella_virus	100.0	7.1e-81
WP_000679702.1|384348_384522_+	hypothetical protein	NA	C6ZR56	Salmonella_phage	100.0	5.2e-32
WP_000113766.1|384488_384671_+	NinE family protein	NA	C6ZR57	Salmonella_phage	100.0	5.7e-29
WP_000566860.1|384667_384838_+	protein ninF	NA	A0A1R3Y5V0	Salmonella_virus	100.0	2.5e-26
WP_001108030.1|384830_385442_+	recombination protein NinG	NA	A3EYW8	Salmonella_phage	100.0	9.3e-100
WP_000034927.1|385438_385663_+	hypothetical protein	NA	A0A1R3Y5U5	Salmonella_virus	100.0	1.3e-38
WP_000188966.1|385659_385863_+	protein ninH	NA	A0A1R3Y5V4	Salmonella_virus	100.0	1.6e-32
WP_000219141.1|385843_386023_+	hypothetical protein	NA	E7C9S6	Salmonella_phage	94.9	1.3e-22
WP_000027547.1|386019_386538_+	DUF1133 family protein	NA	A0A1R3Y5U9	Salmonella_virus	100.0	2.0e-95
WP_000286100.1|387002_387206_+	hypothetical protein	NA	I6R0S9	Salmonella_phage	100.0	1.1e-33
WP_024132440.1|387183_387681_+	lysozyme	NA	A0A1R3Y5W5	Salmonella_virus	100.0	1.7e-91
WP_024132441.1|387769_388207_+|lysis	lysis protein	lysis	A0A1R3Y6Z8	Salmonella_virus	100.0	1.8e-73
WP_000881329.1|388356_388962_+	Rha family transcriptional regulator	NA	A0A1R3Y613	Salmonella_virus	100.0	1.4e-111
WP_001279869.1|389223_389484_-	hypothetical protein	NA	A0A089FW14	Salmonella_phage	100.0	6.6e-39
WP_000807793.1|389791_390034_+	DUF2560 family protein	NA	A0A1R3Y5V5	Salmonella_virus	100.0	1.7e-36
WP_000252708.1|390035_390215_+	hypothetical protein	NA	A0A2H4A350	Salmonella_phage	100.0	1.1e-24
WP_000729927.1|390238_390727_+	hypothetical protein	NA	A3EYX3	Salmonella_phage	100.0	2.9e-88
WP_000417855.1|390704_392204_+|terminase	terminase	terminase	A0A1R3Y5N2	Salmonella_virus	100.0	2.8e-307
WP_000774719.1|392203_394381_+|portal	portal protein	portal	A0A1R3Y5N6	Salmonella_virus	100.0	0.0e+00
WP_000433856.1|394394_395306_+	scaffold protein	NA	A0A1R3Y5R6	Salmonella_virus	100.0	4.9e-161
WP_001196932.1|395305_396598_+|coat	coat protein	coat	A0A1R3Y5Q0	Salmonella_virus	100.0	1.1e-243
WP_000538676.1|396638_397199_+	hypothetical protein	NA	A0A1R3Y5P2	Salmonella_virus	100.0	1.1e-102
WP_001166103.1|397182_397683_+	packaged DNA stabilization protein p27	NA	Q76H19	Enterobacteria_phage	100.0	4.2e-90
WP_001122423.1|397642_399061_+	packaged DNA stabilization protein gp10	NA	E7C9U1	Salmonella_phage	99.4	4.6e-275
WP_000774926.1|399064_399766_+	hypothetical protein	NA	A0A1R3Y5X6	Salmonella_virus	100.0	1.2e-74
WP_000627700.1|399765_400221_+	DUF2824 family protein	NA	A0A1R3Y5P3	Salmonella_virus	100.0	1.8e-87
WP_000964892.1|400223_400913_+	hypothetical protein	NA	A0A1R3Y5P8	Salmonella_virus	100.0	4.0e-91
WP_000190209.1|400922_402293_+	phage DNA ejection protein	NA	A0A1R3Y5Q4	Salmonella_virus	100.0	7.6e-251
WP_000868978.1|402292_404260_+	hypothetical protein	NA	A0A1R3Y5Q1	Salmonella_virus	100.0	0.0e+00
WP_001280422.1|404415_406401_+	endorhamnosidase	NA	A0A1R3Y5S2	Salmonella_virus	100.0	0.0e+00
WP_014343801.1|406440_408363_-	acyltransferase	NA	A0A1R3Y5Q6	Salmonella_virus	100.0	0.0e+00
417624:417640	attR	GATATTGAAATTCGCGT	NA	NA	NA	NA
>prophage 2
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	1014520	1023250	4879400	protease,transposase	Dickeya_phage(16.67%)	6	NA	NA
WP_001201749.1|1014520_1015639_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
WP_000447499.1|1017709_1017931_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
WP_000520789.1|1018254_1018575_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
WP_000934063.1|1018605_1020882_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
WP_000502119.1|1021073_1021532_+|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	1.0e-13
WP_085983316.1|1021994_1023250_-|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	33.9	5.4e-17
>prophage 3
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	1073343	1172918	4879400	protease,tRNA,terminase,tail,portal,holin,transposase,lysis	Salmonella_phage(41.82%)	99	NA	NA
WP_001154025.1|1073343_1074147_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_001288828.1|1074139_1075462_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_000060025.1|1075442_1076147_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_000572725.1|1076146_1080613_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_000925871.1|1080957_1082799_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_000357052.1|1083058_1083607_+	YcbK family protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
WP_001109471.1|1083634_1084282_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_000462653.1|1084343_1085534_-	aspartate transaminase	NA	NA	NA	NA	NA
WP_000977713.1|1085718_1086810_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	2.2e-99
WP_000117870.1|1087416_1088817_-|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.1	4.5e-81
WP_000762342.1|1089017_1089479_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_000544849.1|1089795_1091010_+	diaminopropionate ammonia-lyase	NA	NA	NA	NA	NA
WP_000893207.1|1091254_1092691_+	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
WP_000191399.1|1092768_1093971_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001262306.1|1094165_1095458_-	DUF3596 domain-containing protein	NA	S4TSP2	Salmonella_phage	99.8	1.0e-252
WP_000065276.1|1095502_1095751_-	excisionase family protein	NA	S4TND0	Salmonella_phage	100.0	4.7e-42
WP_001237031.1|1095791_1096031_-	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_001539618.1|1096073_1097231_-	recombinase RecT	NA	S4TTE8	Salmonella_phage	100.0	1.6e-217
WP_000017118.1|1097193_1100079_-	PD-(D/E)XK nuclease-like domain-containing protein	NA	S4TNL0	Salmonella_phage	97.2	0.0e+00
WP_001668146.1|1100205_1100505_-	hypothetical protein	NA	S4TSN6	Salmonella_phage	84.5	8.1e-49
WP_000917564.1|1100526_1100685_-	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	1.2e-22
WP_014343821.1|1100677_1100938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038966.1|1100987_1101398_-	helix-turn-helix domain-containing protein	NA	A0A1B5FPF4	Escherichia_phage	42.4	8.1e-07
WP_000370145.1|1101517_1101757_+	helix-turn-helix domain-containing protein	NA	H6WRX5	Salmonella_phage	47.2	8.3e-12
WP_001574095.1|1101722_1102097_+	hypothetical protein	NA	S4TTD7	Salmonella_phage	99.2	3.9e-64
WP_000800010.1|1103106_1103856_+	ATP-binding protein	NA	S4TNF5	Salmonella_phage	99.6	3.6e-138
WP_000113629.1|1103866_1104214_+	DUF977 family protein	NA	H6WRX9	Salmonella_phage	89.6	5.4e-52
WP_000065108.1|1104210_1104522_+	ead/Ea22-like family protein	NA	A0A220NQV2	Salmonella_phage	97.2	7.2e-32
WP_014343823.1|1104599_1104890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001217665.1|1105181_1105415_+	DinI family protein	NA	H6WRY5	Salmonella_phage	98.7	2.1e-36
WP_000807548.1|1105526_1105748_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000929805.1|1105830_1106433_+	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	98.5	8.3e-109
WP_001096552.1|1106641_1107253_+	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	91.6	6.9e-79
WP_001617856.1|1107249_1107396_+	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	97.9	4.3e-19
WP_001047631.1|1107385_1108183_+	antitermination protein	NA	A0A0M4S661	Salmonella_phage	99.6	2.3e-151
WP_001534733.1|1108739_1108865_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000798705.1|1109000_1109450_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001141973.1|1109810_1110497_-|protease	type III secretion system effector protease GtgA	protease	Q9MBM0	Phage_Gifsy-2	100.0	2.1e-132
WP_001574216.1|1110772_1111102_+|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_014343824.1|1111085_1111538_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	96.6	5.1e-79
WP_001541990.1|1111555_1112035_+|lysis	lysis protein	lysis	Q56118	Enterobacteria_phage	77.0	1.4e-55
WP_000371785.1|1112242_1112776_+	DUF1441 family protein	NA	A0A291AWV8	Escherichia_phage	48.1	1.3e-33
WP_000989241.1|1112732_1114871_+|terminase	phage terminase large subunit family protein	terminase	A5LH27	Enterobacteria_phage	72.6	3.4e-290
WP_000196190.1|1114867_1115074_+	hypothetical protein	NA	A0A1W6JT66	Pseudomonas_phage	53.3	2.9e-05
WP_001009207.1|1115070_1116618_+|portal	phage portal protein	portal	A0A291AWU2	Escherichia_phage	64.3	2.8e-177
WP_010989008.1|1116541_1118623_+|protease	Clp protease ClpP	protease	A0A291AWT6	Escherichia_phage	69.5	4.8e-265
WP_001107908.1|1118713_1119037_+	DUF2190 family protein	NA	K7PLV6	Enterobacteria_phage	61.3	7.7e-29
WP_000774239.1|1119029_1119329_+	ATP-binding protein	NA	K7PH43	Enterobacteria_phage	45.1	4.5e-15
WP_000453194.1|1119309_1119876_+|tail	phage tail protein	tail	Q9G063	Phage_Gifsy-2	97.8	9.5e-14
WP_000196701.1|1119872_1120274_+|tail	tail protein	tail	K7PHM6	Enterobacterial_phage	60.2	2.6e-42
WP_000132756.1|1120285_1121035_+|tail	phage tail protein	tail	A0A291AWU6	Escherichia_phage	68.6	3.7e-90
WP_000478860.1|1121080_1121479_+|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.1	6.6e-30
WP_010989009.1|1121475_1121805_+|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	50.9	5.0e-23
WP_010989010.1|1121884_1124872_+|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.1	8.2e-266
WP_000978296.1|1124868_1125201_+|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	61.5	3.3e-35
WP_000725267.1|1125299_1125797_+	Ail/Lom family outer membrane beta-barrel protein	NA	A0A1B0VBR9	Salmonella_phage	36.6	1.4e-16
WP_000877926.1|1125913_1126447_-	superoxide dismutase [Cu-Zn]	NA	Q9MC02	Salmonella_phage	54.0	1.8e-46
WP_001152415.1|1126536_1127232_+|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.3e-89
WP_000606351.1|1127241_1127979_+|tail	phage tail protein	tail	A0A0P0ZE89	Stx2-converting_phage	76.1	1.6e-114
WP_000246065.1|1127876_1128581_+|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	62.6	9.2e-67
WP_001541993.1|1131127_1132003_+	DUF1983 domain-containing protein	NA	K7PKJ2	Enterobacteria_phage	77.1	1.1e-48
WP_000178849.1|1132041_1132284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001144679.1|1132337_1134776_+|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A0K2FIZ6	Escherichia_phage	63.4	2.9e-91
WP_000143167.1|1134775_1135357_+|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
WP_001067855.1|1136754_1137459_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
WP_000334547.1|1138276_1138903_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
WP_010989011.1|1138971_1139271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001525490.1|1139255_1139942_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000497441.1|1140212_1140404_-	DinI-like family protein	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
WP_000193784.1|1140830_1143443_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.6	6.3e-20
WP_000291723.1|1143650_1144661_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_001220671.1|1144826_1145369_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_000224069.1|1145365_1146475_-	MOSC domain-containing protein	NA	NA	NA	NA	NA
WP_001086486.1|1146573_1148682_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_000053044.1|1148694_1150602_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	29.8	2.4e-53
WP_000333152.1|1150616_1151870_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_000433414.1|1151874_1153515_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_000759136.1|1153511_1154075_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_001537784.1|1154330_1154498_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_000227928.1|1154597_1155116_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_000156453.1|1155184_1156945_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_000877172.1|1157130_1157583_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_001674965.1|1157654_1158707_-	porin OmpA	NA	NA	NA	NA	NA
WP_000288732.1|1159063_1159573_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_001202375.1|1159789_1160395_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_000950880.1|1160381_1162535_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_001261222.1|1162553_1163000_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_000420505.1|1163123_1165178_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	27.6	8.5e-20
WP_000424187.1|1165213_1165672_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_000847719.1|1165766_1166429_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_001537782.1|1166602_1167016_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_000561983.1|1167060_1167378_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_000140480.1|1167435_1168647_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	NA	NA	NA	NA
WP_000859419.1|1168861_1169410_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_000548082.1|1169435_1170215_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000072884.1|1170263_1170545_+	acylphosphatase	NA	NA	NA	NA	NA
WP_000904446.1|1170541_1170871_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_000374050.1|1170957_1171617_-|protease	FtsH protease modulator YccA	protease	A0A2H4JFM9	uncultured_Caudovirales_phage	51.9	2.3e-43
WP_000938191.1|1172237_1172918_-|protease	type III secretion system effector protease PipA	protease	Q9MBM0	Phage_Gifsy-2	70.6	8.3e-81
>prophage 4
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	2029244	2108586	4879400	plate,protease,tail,terminase,capsid,portal,holin,transposase,integrase,head,lysis	Salmonella_phage(86.36%)	102	2035782:2035797	2110209:2110224
WP_000502119.1|2029244_2029703_-|transposase	IS200/IS605-like element IS200F family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	1.0e-13
WP_000659251.1|2029883_2031089_-	lysine-N-methylase	NA	NA	NA	NA	NA
WP_000079805.1|2031167_2032655_-	FliC/FljB family flagellin	NA	NA	NA	NA	NA
WP_000146802.1|2032911_2034315_+	flagellar filament capping protein FliD	NA	NA	NA	NA	NA
WP_000287764.1|2034329_2034737_+	flagellar export chaperone FliS	NA	NA	NA	NA	NA
WP_000204899.1|2034736_2035105_+	flagella biosynthesis regulatory protein FliT	NA	NA	NA	NA	NA
WP_000795487.1|2035176_2036661_+	alpha-amylase	NA	NA	NA	NA	NA
2035782:2035797	attL	TGAAAATATCGATTTT	NA	NA	NA	NA
WP_000754694.1|2036700_2037114_-	lipoprotein	NA	NA	NA	NA	NA
WP_001535233.1|2037299_2038505_+	selenium metabolism membrane protein YedE/FdhT	NA	NA	NA	NA	NA
WP_000790504.1|2038501_2038735_+	sulfurtransferase-like selenium metabolism protein YedF	NA	NA	NA	NA	NA
WP_000639596.1|2038999_2039386_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000719036.1|2039505_2039820_-	flagellar hook-basal body complex protein FliE	NA	NA	NA	NA	NA
WP_001276834.1|2040036_2041719_+	flagellar M-ring protein FliF	NA	NA	NA	NA	NA
WP_000067735.1|2041711_2042707_+	flagellar motor switch protein FliG	NA	NA	NA	NA	NA
WP_000064163.1|2042699_2043407_+	flagellar assembly protein FliH	NA	NA	NA	NA	NA
WP_000213257.1|2043406_2044777_+	flagellum-specific ATP synthase FliI	NA	NA	NA	NA	NA
WP_000046981.1|2044798_2045242_+	flagella biosynthesis chaperone FliJ	NA	NA	NA	NA	NA
WP_000631669.1|2045238_2046456_+	flagellar hook length control protein FliK	NA	NA	NA	NA	NA
WP_000132169.1|2046560_2047028_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
WP_000502811.1|2047032_2048037_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
WP_001282115.1|2048033_2048447_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
WP_000978276.1|2048446_2048824_+	flagellar type III secretion system protein FliO	NA	NA	NA	NA	NA
WP_001253410.1|2048823_2049561_+	flagellar type III secretion system pore protein FliP	NA	NA	NA	NA	NA
WP_000187355.1|2049570_2049840_+	flagellar biosynthesis protein FliQ	NA	NA	NA	NA	NA
WP_000616953.1|2049848_2050643_+	flagellar type III secretion system protein FliR	NA	NA	NA	NA	NA
WP_000103974.1|2050924_2051548_+	transcriptional regulator RcsA	NA	NA	NA	NA	NA
WP_000867218.1|2051586_2051781_-	protein DsrB	NA	NA	NA	NA	NA
WP_000844798.1|2051909_2052137_+	YodD family peroxide/acid resistance protein	NA	NA	NA	NA	NA
WP_000948794.1|2052446_2053262_+	mannosyl-3-phosphoglycerate phosphatase-related protein	NA	NA	NA	NA	NA
WP_001119819.1|2053240_2054953_-	cellulose biosynthesis regulator YedQ	NA	A0A127AWB9	Bacillus_phage	37.4	1.2e-19
WP_000232161.1|2055117_2055303_-	YodC family protein	NA	NA	NA	NA	NA
WP_085983315.1|2055379_2056297_-	DUF808 domain-containing protein	NA	NA	NA	NA	NA
WP_001212264.1|2056466_2057387_+	drug/metabolite exporter YedA	NA	NA	NA	NA	NA
WP_000785978.1|2057375_2057846_-	very short patch repair endonuclease	NA	E5E3X5	Burkholderia_phage	46.9	1.2e-30
WP_001157322.1|2057826_2059257_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
WP_000377041.1|2059330_2060026_-	phosphohydrolase	NA	A0A1D6Y7U0	Golden_Marseillevirus	27.1	2.8e-07
WP_000107430.1|2060117_2060417_-	membrane protein	NA	NA	NA	NA	NA
WP_001080679.1|2061067_2062273_+	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	54.9	2.8e-108
WP_024131109.1|2062533_2062722_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000208509.1|2062732_2062945_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
WP_000457662.1|2063399_2064668_-	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	92.2	4.2e-227
WP_000394196.1|2064670_2065090_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
WP_000500831.1|2065216_2065378_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001526483.1|2066008_2066230_-	helix-turn-helix domain-containing protein	NA	Q8HAB1	Salmonella_phage	100.0	1.2e-36
WP_000492926.1|2066442_2067450_+	type III secretion system effector arginine glycosyltransferase	NA	Q8HAB2	Salmonella_phage	100.0	7.9e-197
WP_015701331.1|2067734_2068334_-|tail	tail fiber assembly protein	tail	Q8HAB3	Salmonella_phage	100.0	5.9e-107
WP_000554737.1|2068303_2069866_-	hypothetical protein	NA	Q8HAB4	Salmonella_phage	100.0	2.6e-287
WP_001207832.1|2069852_2070440_-	DUF2313 domain-containing protein	NA	A0A192Y5V3	Salmonella_phage	100.0	2.9e-114
WP_014343855.1|2070442_2070964_-|plate	baseplate J/gp47 family protein	plate	Q8HAB6	Salmonella_phage	100.0	2.9e-94
WP_014343856.1|2070998_2071544_-|plate	baseplate J/gp47 family protein	plate	Q8HAB7	Salmonella_phage	100.0	9.2e-99
WP_000605050.1|2071515_2071929_-	phage GP46 family protein	NA	Q8HAB8	Salmonella_phage	100.0	1.1e-75
WP_001273649.1|2071933_2072467_-|plate	phage baseplate assembly protein	plate	Q8HAB9	Salmonella_phage	100.0	1.4e-96
WP_001066636.1|2072466_2073525_-	hypothetical protein	NA	Q8HAC0	Salmonella_phage	100.0	1.3e-202
WP_000863818.1|2073521_2074862_-	DNA circularization N-terminal domain-containing protein	NA	A0A192Y5U9	Salmonella_phage	99.6	5.7e-251
WP_000785385.1|2074895_2076824_-|tail	phage tail tape measure protein	tail	Q8HAC2	Salmonella_phage	99.8	0.0e+00
WP_000588852.1|2076908_2077235_-|tail	phage tail assembly protein	tail	Q8HAC3	Salmonella_phage	99.1	2.3e-52
WP_000515952.1|2077231_2077588_-|tail	phage tail tube protein	tail	A0A192Y8K0	Salmonella_phage	100.0	2.6e-62
WP_001007991.1|2077587_2079084_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	Q8HAC5	Salmonella_phage	100.0	2.7e-278
WP_000497739.1|2079073_2079238_-	DUF2635 domain-containing protein	NA	Q8HAC6	Salmonella_phage	100.0	1.0e-24
WP_000779218.1|2079241_2079802_-	hypothetical protein	NA	Q8HAC7	Salmonella_phage	100.0	3.0e-105
WP_001135697.1|2079798_2080311_-	hypothetical protein	NA	Q8HAC8	Salmonella_phage	100.0	4.6e-92
WP_000702408.1|2080282_2080687_-|head	phage head closure protein	head	Q8HAC9	Salmonella_phage	100.0	1.4e-72
WP_000927378.1|2080683_2081007_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A192Y8J4	Salmonella_phage	100.0	6.3e-55
WP_000601353.1|2081009_2081210_-	hypothetical protein	NA	Q8HAD1	Salmonella_phage	100.0	1.4e-28
WP_000257528.1|2081260_2082466_-|capsid	phage major capsid protein	capsid	Q8HAD2	Salmonella_phage	100.0	1.6e-223
WP_001193639.1|2082480_2083131_-|head,protease	HK97 family phage prohead protease	head,protease	Q8HAD3	Salmonella_phage	100.0	1.5e-119
WP_000466254.1|2083108_2084350_-|portal	phage portal protein	portal	Q8HAD4	Salmonella_phage	99.8	2.0e-242
WP_000605609.1|2084349_2084532_-	hypothetical protein	NA	Q8HAD5	Salmonella_phage	100.0	1.0e-25
WP_000088182.1|2084543_2086277_-|terminase	terminase large subunit	terminase	Q8HAD6	Salmonella_phage	100.0	0.0e+00
WP_000929191.1|2086273_2086768_-|terminase	phage terminase small subunit P27 family	terminase	Q8HAD7	Salmonella_phage	100.0	4.6e-89
WP_001135225.1|2086893_2087244_-	HNH endonuclease	NA	Q8HA82	Salmonella_phage	100.0	2.5e-65
WP_001292890.1|2087304_2087607_-	hypothetical protein	NA	Q8HA83	Salmonella_phage	100.0	3.6e-52
WP_000877027.1|2087826_2088246_-	KilA-N domain-containing protein	NA	Q8HA84	Salmonella_phage	100.0	4.8e-71
WP_001050825.1|2088458_2088944_-|lysis	lysis protein	lysis	Q8HA85	Salmonella_phage	100.0	5.9e-81
WP_001005901.1|2088940_2089555_-	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	100.0	9.3e-116
WP_001527046.1|2089557_2089902_-|holin	phage holin, lambda family	holin	Q8HA87	Salmonella_phage	100.0	5.3e-44
WP_014343859.1|2090063_2090498_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001527054.1|2090427_2090685_-	hypothetical protein	NA	Q8HA88	Salmonella_phage	100.0	5.2e-44
WP_000188927.1|2090817_2091441_-	hypothetical protein	NA	Q8HA89	Salmonella_phage	100.0	9.1e-119
WP_001202277.1|2091451_2092441_-	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	97.6	4.9e-191
WP_001061457.1|2092448_2093309_-	KilA-N domain-containing protein	NA	Q8HA92	Salmonella_phage	100.0	2.9e-163
WP_001241579.1|2093325_2093715_-	RusA family crossover junction endodeoxyribonuclease	NA	Q8HA93	Salmonella_phage	100.0	3.7e-70
WP_000066908.1|2093711_2094605_-	phage N-6-adenine-methyltransferase	NA	Q8HA94	Salmonella_phage	100.0	7.6e-175
WP_001684745.1|2094604_2095087_-	PerC family transcriptional regulator	NA	Q8HA95	Salmonella_phage	100.0	1.1e-87
WP_000061500.1|2095088_2095907_-	helix-turn-helix domain-containing protein	NA	Q8HA96	Salmonella_phage	100.0	2.8e-136
WP_000620702.1|2095903_2096128_-	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
WP_001087402.1|2096124_2097282_-	Rha family phage regulatory protein	NA	Q8HA97	Salmonella_phage	100.0	4.2e-218
WP_000509731.1|2097278_2097833_-	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	100.0	6.9e-102
WP_001191666.1|2097861_2098086_-	helix-turn-helix transcriptional regulator	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
WP_001020636.1|2098183_2098879_+	helix-turn-helix transcriptional regulator	NA	Q8HAA0	Salmonella_phage	100.0	3.2e-128
WP_000997190.1|2099693_2100065_+	hypothetical protein	NA	Q8HAA1	Salmonella_phage	100.0	1.1e-63
WP_000080415.1|2100122_2100950_+	DUF2303 family protein	NA	Q8HAA2	Salmonella_phage	100.0	7.5e-153
WP_000008351.1|2101086_2101626_+	hypothetical protein	NA	A0A192Y8M4	Salmonella_phage	100.0	2.6e-98
WP_000764235.1|2101696_2101927_+	hypothetical protein	NA	Q8HAA4	Salmonella_phage	100.0	2.0e-34
WP_000071070.1|2101923_2102439_+	DUF262 domain-containing protein	NA	Q8HAA5	Salmonella_phage	100.0	7.4e-98
WP_000065095.1|2102435_2103053_+	ead/Ea22-like family protein	NA	Q8HAA6	Salmonella_phage	100.0	2.6e-113
WP_000208068.1|2103049_2103883_+	hypothetical protein	NA	Q8HAA7	Salmonella_phage	100.0	4.7e-163
WP_001061334.1|2103886_2104456_+	3'-5' exoribonuclease	NA	A0A192Y6E0	Salmonella_phage	100.0	7.1e-110
WP_001527041.1|2104495_2104723_+	DUF4224 domain-containing protein	NA	Q8HAA9	Salmonella_phage	100.0	3.2e-37
WP_000532847.1|2104724_2105714_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A192Y7M7	Salmonella_phage	100.0	8.6e-196
WP_000598920.1|2106005_2106803_+	DgsA anti-repressor MtfA	NA	NA	NA	NA	NA
WP_001219015.1|2108112_2108586_+	peptidase	NA	A0A0F6TJ61	Escherichia_coli_O157_typing_phage	77.6	7.1e-39
2110209:2110224	attR	TGAAAATATCGATTTT	NA	NA	NA	NA
>prophage 5
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	2194580	2205086	4879400		Enterobacteria_phage(37.5%)	10	NA	NA
WP_000126349.1|2194580_2195894_-	lipopolysaccharide biosynthesis protein RfbH	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
WP_000565905.1|2195920_2197000_-	CDP-glucose 4,6-dehydratase	NA	A0A222YY99	Synechococcus_phage	24.1	6.6e-16
WP_000648784.1|2197004_2197778_-	glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000018226.1|2197774_2198767_-	CDP-6-deoxy-delta-3,4-glucoseen reductase	NA	NA	NA	NA	NA
WP_000973708.1|2198772_2199324_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	2.2e-52
WP_000857529.1|2199324_2200203_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.5	9.3e-109
WP_001023662.1|2200250_2201150_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	1.4e-30
WP_000697840.1|2201149_2202235_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.2e-102
WP_000981469.1|2202611_2203505_-	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
WP_001111841.1|2203682_2205086_-	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	27.1	3.1e-21
>prophage 6
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	2273394	2282565	4879400	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
WP_000195332.1|2273394_2275428_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
WP_000703138.1|2275668_2276127_+	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	71.9	3.2e-52
WP_001197952.1|2276298_2276829_+	YehR family lipoprotein	NA	NA	NA	NA	NA
WP_000950413.1|2276885_2277353_-	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
WP_000598637.1|2277399_2278119_-	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_000272845.1|2278115_2279801_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.1	6.2e-279
WP_001240418.1|2280023_2280755_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
WP_001261696.1|2280814_2280922_+	protein YohO	NA	NA	NA	NA	NA
WP_000824855.1|2280902_2281634_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000569166.1|2281617_2282565_-	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	3.7e-10
>prophage 7
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	2301972	2368377	4879400	holin,tail,lysis	Salmonella_phage(30.0%)	59	NA	NA
WP_000989296.1|2301972_2302668_+|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
WP_000553526.1|2302821_2303706_+	cytidine deaminase	NA	NA	NA	NA	NA
WP_000920081.1|2303882_2304602_+	outer membrane permeability protein SanA	NA	NA	NA	NA	NA
WP_000605187.1|2304598_2304844_+	DUF2542 family protein	NA	NA	NA	NA	NA
WP_001136409.1|2305048_2306290_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_000956095.1|2306283_2307519_+	NAD-dependent dihydropyrimidine dehydrogenase subunit PreA	NA	NA	NA	NA	NA
WP_001275101.1|2307593_2308604_-	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA	NA
WP_000535907.1|2308619_2310140_-	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	NA	F2Y2R6	Organic_Lake_phycodnavirus	31.9	1.0e-09
WP_001036943.1|2310273_2311272_-	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA	NA
WP_000628631.1|2311770_2312793_-	HTH-type transcriptional regulator GalS	NA	NA	NA	NA	NA
WP_001526153.1|2312942_2314085_-	DUF418 family protein	NA	NA	NA	NA	NA
WP_001139611.1|2314099_2314768_-	GTP cyclohydrolase I FolE	NA	M1Q6X8	Cellulophaga_phage	56.3	4.1e-56
WP_000425488.1|2315097_2315955_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_000876817.1|2315943_2316333_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000443208.1|2316337_2317705_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
WP_000022915.1|2317921_2318809_+	phosphoserine phosphatase SerB	NA	NA	NA	NA	NA
WP_000023807.1|2318841_2320164_+	MFS transporter	NA	NA	NA	NA	NA
WP_000488255.1|2320207_2322199_-	catecholate siderophore receptor CirA	NA	A0A0P0I887	Acinetobacter_phage	37.9	6.7e-14
WP_000535000.1|2322543_2324013_-	lysine-specific permease	NA	NA	NA	NA	NA
WP_000548308.1|2324202_2325066_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000137961.1|2325186_2326236_+	YeiH family protein	NA	NA	NA	NA	NA
WP_000873909.1|2326314_2327172_+	deoxyribonuclease IV	NA	A0A1V0SBL9	Catovirus	28.5	2.2e-22
WP_000854414.1|2327236_2328925_-	PTS fructose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_000091249.1|2328941_2329880_-	1-phosphofructokinase	NA	NA	NA	NA	NA
WP_000487287.1|2329879_2331010_-	fused PTS fructose transporter subunit IIA/HPr protein	NA	NA	NA	NA	NA
WP_000551937.1|2331378_2332560_+	sugar efflux transporter SetB	NA	NA	NA	NA	NA
WP_001213882.1|2332624_2333290_-	membrane protein	NA	NA	NA	NA	NA
WP_001519564.1|2333291_2333414_-	membrane protein	NA	NA	NA	NA	NA
WP_010989043.1|2333801_2334056_-	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
WP_001136822.1|2334379_2334952_+	elongation factor P-like protein YeiP	NA	NA	NA	NA	NA
WP_000169350.1|2335164_2336151_+	GTP-binding protein	NA	NA	NA	NA	NA
WP_000178095.1|2336180_2336900_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000241015.1|2337313_2337886_+	bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase	NA	A0A1V0DZX6	Clostridioides_phage	38.9	8.1e-13
WP_000957746.1|2338211_2339768_+	cyclic di-GMP phosphodiesterase	NA	NA	NA	NA	NA
WP_000561748.1|2339874_2341680_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000501623.1|2341689_2342784_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA	NA
WP_001137765.1|2342783_2343809_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000203622.1|2343810_2345400_+	microcin C ABC transporter ATP-binding protein YejF	NA	G9BWD6	Planktothrix_phage	32.5	8.5e-20
WP_001094639.1|2345403_2345748_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000213347.1|2346138_2347329_-	Bcr/CflA family multidrug efflux MFS transporter	NA	S4TR35	Salmonella_phage	22.2	2.4e-19
WP_001234836.1|2347356_2348052_-	16S rRNA pseudouridine(516) synthase RsuA	NA	NA	NA	NA	NA
WP_000578121.1|2348203_2349964_+	DEAD/DEAH box helicase	NA	M4Q3N1	Vibrio_phage	41.6	1.9e-100
WP_000494192.1|2350088_2350373_+	50S ribosomal protein L25	NA	NA	NA	NA	NA
WP_000033440.1|2350481_2351102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000050806.1|2351129_2352137_-	nucleoid-associated protein YejK	NA	A0A1V0E8C0	Vibrio_phage	48.3	4.5e-83
WP_001135904.1|2352316_2352544_+	YejL family protein	NA	NA	NA	NA	NA
WP_000256150.1|2352575_2354336_+	cardiolipin transport protein PbgA	NA	NA	NA	NA	NA
WP_000806401.1|2354616_2355120_-	LexA family transcriptional regulator	NA	Q1MVE7	Enterobacteria_phage	71.3	9.5e-50
WP_000884778.1|2355147_2355438_+	DinI family protein	NA	S4TND2	Salmonella_phage	83.3	4.7e-25
WP_000639473.1|2355794_2357624_+	acyltransferase	NA	C6ZR20	Salmonella_phage	29.6	3.0e-61
WP_000022213.1|2357677_2358121_-|tail	tail fiber assembly protein	tail	A0A0F7LDZ0	Escherichia_phage	43.9	1.4e-28
WP_001215679.1|2358498_2359026_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	31.3	3.1e-11
WP_000554739.1|2359028_2360270_-	hypothetical protein	NA	Q8HAB4	Salmonella_phage	95.3	1.0e-52
WP_001120499.1|2360862_2361192_-|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	94.6	3.9e-36
WP_010989045.1|2362849_2363218_-	antitermination protein Q	NA	A5LH77	Enterobacteria_phage	81.7	7.4e-52
WP_001202279.1|2363232_2364222_-	DUF968 domain-containing protein	NA	A0A1C9IHZ5	Salmonella_phage	97.3	6.0e-189
WP_014343868.1|2364550_2366917_-	SPI-2 type III secretion system effector E3 ubiquitin transferase SspH2	NA	Q9MBL9	Phage_Gifsy-2	88.0	3.2e-71
WP_001113462.1|2367085_2367289_-|tail	tail protein	tail	NA	NA	NA	NA
WP_000624225.1|2367585_2368377_-|tail	tail fiber protein	tail	Q1MVL8	Enterobacteria_phage	31.6	1.7e-48
>prophage 8
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	2707964	2815106	4879400	protease,tail,tRNA,terminase,capsid,portal,holin,transposase,integrase,head,lysis	Salmonella_phage(33.33%)	112	2732509:2732525	2823010:2823026
WP_000940032.1|2707964_2708696_-|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	tRNA	NA	NA	NA	NA
WP_000553467.1|2708814_2709618_+	inositol-1-monophosphatase	NA	NA	NA	NA	NA
WP_000174944.1|2709762_2710641_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	24.7	3.5e-15
WP_000985204.1|2710822_2711866_+	anaerobic sulfite reductase subunit A	NA	NA	NA	NA	NA
WP_000017588.1|2711869_2712688_+	anaerobic sulfite reductase subunit B	NA	NA	NA	NA	NA
WP_000020685.1|2712698_2713712_+	sulfite reductase subunit C	NA	NA	NA	NA	NA
WP_000111027.1|2713712_2714699_-	nickel/cobalt transporter	NA	NA	NA	NA	NA
WP_000805728.1|2714689_2715328_-	DUF1007 family protein	NA	NA	NA	NA	NA
WP_000982961.1|2715453_2716731_+	stationary phase inducible protein CsiE	NA	NA	NA	NA	NA
WP_001173729.1|2716725_2717865_-	3-phenylpropionate MFS transporter	NA	NA	NA	NA	NA
WP_000919178.1|2718060_2719314_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.0	1.3e-100
WP_000883142.1|2719638_2720829_+	NO-inducible flavohemoprotein	NA	NA	NA	NA	NA
WP_001187149.1|2721010_2722555_+	lysine decarboxylation/transport transcriptional activator CadC	NA	NA	NA	NA	NA
WP_000100008.1|2722915_2724247_+	cadaverine/lysine antiporter	NA	NA	NA	NA	NA
WP_001100652.1|2724329_2726474_+	lysine decarboxylase CadA	NA	NA	NA	NA	NA
WP_000856793.1|2726529_2727990_+	dipeptide permease DtpD	NA	A0A0P0IY73	Acinetobacter_phage	28.8	1.7e-46
WP_000717694.1|2728038_2728377_-	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
WP_000625591.1|2728453_2729791_-	two-component system response regulator GlrR	NA	W8CYM9	Bacillus_phage	29.2	1.8e-10
WP_001054236.1|2729787_2730552_-	two-component system QseEF-associated lipoprotein QseG	NA	NA	NA	NA	NA
WP_001670672.1|2730553_2731984_-	two component system sensor histidine kinase QseE/GlrK	NA	W8CYF6	Bacillus_phage	26.1	2.0e-15
2732509:2732525	attL	CGCCTTATCCGGCCTAC	NA	NA	NA	NA
WP_000970045.1|2732633_2736521_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	57.6	1.4e-127
WP_001747289.1|2736542_2736776_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000734248.1|2736776_2738321_+	membrane-bound lytic murein transglycosylase MltF	NA	NA	NA	NA	NA
WP_001134566.1|2738371_2738923_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	NA	NA	NA	NA
WP_000253558.1|2738947_2739583_-	phosphatidylglycerophosphatase C	NA	NA	NA	NA	NA
WP_000361664.1|2739586_2740948_-	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001048530.1|2740958_2741852_-	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA	NA
WP_000995703.1|2741967_2742816_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000684022.1|2742854_2743772_-	oxidoreductase	NA	NA	NA	NA	NA
WP_001276370.1|2743793_2744990_-	OFA family MFS transporter	NA	NA	NA	NA	NA
WP_001022463.1|2745105_2746032_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	24.4	3.0e-09
WP_001196290.1|2746069_2746330_+	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	52.3	1.4e-17
WP_000986043.1|2746441_2746822_-	holo-ACP synthase	NA	NA	NA	NA	NA
WP_000818972.1|2746821_2747553_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_000399380.1|2747564_2748293_-	DNA repair protein RecO	NA	NA	NA	NA	NA
WP_000102232.1|2748304_2749210_-	GTPase Era	NA	NA	NA	NA	NA
WP_001068341.1|2749206_2749887_-	ribonuclease III	NA	A0A2K9L5P0	Tupanvirus	31.8	7.4e-21
WP_000002559.1|2750160_2751135_-	signal peptidase I	NA	NA	NA	NA	NA
WP_000790154.1|2751151_2752951_-	elongation factor 4	NA	E4ZFJ7	Streptococcus_phage	24.9	7.2e-23
WP_010989047.1|2753355_2754849_+	type III secretion effector GogB	NA	Q9MBM1	Phage_Gifsy-1	100.0	3.4e-260
WP_001542312.1|2755327_2755465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015589559.1|2756177_2756342_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_001738443.1|2757049_2757262_-	helix-turn-helix domain-containing protein	NA	S4TTF2	Salmonella_phage	90.6	3.8e-08
WP_010989049.1|2757368_2757596_+	PagK-like protein	NA	NA	NA	NA	NA
WP_000143154.1|2757692_2758271_-|tail	tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	88.9	3.6e-93
WP_000593433.1|2758260_2759085_-	macro domain-containing protein	NA	A0A0M4QWS3	Salmonella_phage	92.0	1.2e-145
WP_001144680.1|2759081_2761454_-|tail	prophage tail fiber N-terminal domain-containing protein	tail	A0A0K2FIZ6	Escherichia_phage	65.6	4.8e-91
WP_000178849.1|2761507_2761750_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000514920.1|2761788_2765151_-	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	79.6	0.0e+00
WP_000246126.1|2765212_2765860_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	77.7	2.1e-89
WP_000662739.1|2765757_2766495_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	85.0	5.2e-129
WP_001152689.1|2766501_2767200_-|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	76.3	5.5e-104
WP_000447369.1|2767209_2767539_-|tail	phage tail protein	tail	A5LH39	Enterobacteria_phage	70.4	1.3e-42
WP_000372065.1|2767541_2770637_-|tail	phage tail tape measure protein	tail	A0A291AWX1	Escherichia_phage	62.3	1.7e-274
WP_010989052.1|2770608_2770947_-|tail	phage tail assembly protein T	tail	A5LH37	Enterobacteria_phage	62.4	1.3e-31
WP_000479607.1|2770943_2771339_-|tail	phage minor tail protein G	tail	A5LH36	Enterobacteria_phage	56.5	2.3e-30
WP_000971954.1|2771389_2772136_-	Ig-like domain-containing protein	NA	A0A291AWU6	Escherichia_phage	76.9	1.9e-99
WP_000033885.1|2772143_2772545_-|tail	tail protein	tail	Q9G0F3	Phage_Gifsy-1	100.0	8.1e-52
WP_000817263.1|2772653_2773784_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	Q9G0F2	Phage_Gifsy-1	100.0	9.2e-218
WP_000677089.1|2773832_2774411_-|tail	phage tail protein	tail	A5LH33	Enterobacteria_phage	80.2	3.7e-82
WP_000083294.1|2774438_2774822_-|head,tail	head-tail joining protein	head,tail	A0A0K2FJB7	Enterobacteria_phage	55.6	9.2e-29
WP_000201486.1|2774832_2775192_-	DNA-packaging protein FI	NA	NA	NA	NA	NA
WP_000522566.1|2775249_2776278_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	61.1	1.7e-114
WP_000011260.1|2776332_2776680_-|head	head decoration protein	head	A0A2R9YJN3	Escherichia_phage	52.7	9.2e-20
WP_001189503.1|2776692_2778189_-	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	52.2	8.1e-97
WP_000831821.1|2778178_2779759_-|portal	phage portal protein	portal	K7P6U7	Enterobacteria_phage	62.8	9.6e-189
WP_000201415.1|2779755_2779959_-	gpW family protein	NA	K7PM10	Enterobacteria_phage	73.8	1.9e-17
WP_000623091.1|2779942_2781874_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	65.7	6.3e-259
WP_001102153.1|2781845_2782391_-|terminase	terminase small subunit	terminase	A0A0U2S671	Escherichia_phage	80.6	1.5e-56
WP_000669690.1|2782677_2783079_+	pre-peptidase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_001533543.1|2783314_2783767_-|lysis	lysis protein	lysis	A0A0M4RD57	Salmonella_phage	92.7	2.9e-66
WP_000984581.1|2783784_2784237_-	lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	5.1e-79
WP_001574216.1|2784220_2784550_-|holin	phage holin, lambda family	holin	A0A0M3ULK9	Salmonella_phage	100.0	5.8e-56
WP_001110783.1|2784825_2785512_+|protease	type III secretion system effector protease GogA	protease	Q9MBM2	Phage_Gifsy-1	100.0	9.4e-133
WP_000657897.1|2785726_2785915_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000211410.1|2786421_2786985_-	ORF6N domain-containing protein	NA	A0A0P0ZC44	Stx2-converting_phage	92.2	7.6e-56
WP_001097241.1|2787257_2787935_-	antitermination protein	NA	I6PDF8	Cronobacter_phage	54.0	7.7e-63
WP_000801757.1|2787931_2788072_-	YlcG family protein	NA	A0A0M5M7B2	Salmonella_phage	78.9	7.2e-08
WP_001096550.1|2788068_2788680_-	recombination protein NinG	NA	A0A0M4RU10	Salmonella_phage	99.0	1.2e-91
WP_000929794.1|2788888_2789491_-	DUF1367 family protein	NA	S4TTI0	Salmonella_phage	98.5	1.4e-108
WP_014343878.1|2789525_2789774_-	hypothetical protein	NA	A0A0U2C0C8	Salmonella_phage	100.0	1.6e-42
WP_001217669.1|2789890_2790124_-	DinI family protein	NA	H6WRY5	Salmonella_phage	100.0	5.6e-37
WP_000877757.1|2790366_2790999_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000664368.1|2791106_2791805_-	DUF550 domain-containing protein	NA	A0A0M4RTV1	Salmonella_phage	85.7	2.1e-63
WP_000801766.1|2791818_2792514_-	hypothetical protein	NA	G8C7U6	Escherichia_phage	45.4	2.1e-55
WP_000024044.1|2792510_2793395_-	replication protein	NA	K7PGT1	Enterobacteria_phage	47.2	1.3e-46
WP_010835408.1|2793486_2793861_-	hypothetical protein	NA	S4TTD7	Salmonella_phage	98.4	1.9e-63
WP_000643689.1|2793820_2794063_-	helix-turn-helix domain-containing protein	NA	A0A0M4QX15	Salmonella_phage	64.1	2.1e-23
WP_000660736.1|2794162_2794558_+	helix-turn-helix domain-containing protein	NA	K7PM35	Enterobacteria_phage	61.4	1.9e-37
WP_001111772.1|2794616_2795456_+	AAA family ATPase	NA	A0A1X9IGI7	Lactococcus_phage	33.3	1.5e-31
WP_000356948.1|2795448_2795835_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000950426.1|2795834_2796497_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000917562.1|2796953_2797112_+	hypothetical protein	NA	H6WRX3	Salmonella_phage	98.1	9.0e-23
WP_001539619.1|2797133_2797484_+	hypothetical protein	NA	S4TSN6	Salmonella_phage	97.4	1.1e-60
WP_000017123.1|2797610_2800538_+	PD-(D/E)XK nuclease-like domain-containing protein	NA	S4TNL0	Salmonella_phage	99.3	0.0e+00
WP_077248255.1|2800500_2801658_+	recombinase RecT	NA	S4TTE8	Salmonella_phage	99.5	3.9e-216
WP_001237031.1|2801700_2801940_+	DUF4060 family protein	NA	S4TR31	Salmonella_phage	100.0	2.0e-37
WP_001670787.1|2801980_2802265_+	excisionase Xis	NA	H6WRW8	Salmonella_phage	86.2	3.1e-42
WP_001007939.1|2802242_2803472_-|integrase	site-specific integrase	integrase	H6WRW7	Salmonella_phage	94.4	2.9e-233
WP_000589087.1|2803969_2804449_-	SoxR-reducing system protein RseC	NA	NA	NA	NA	NA
WP_000812017.1|2804445_2805402_-	sigma-E factor regulatory protein RseB	NA	NA	NA	NA	NA
WP_001168374.1|2805401_2806052_-	anti-sigma-E factor RseA	NA	NA	NA	NA	NA
WP_000003307.1|2806083_2806659_-	RNA polymerase sigma factor RpoE	NA	NA	NA	NA	NA
WP_014344135.1|2806655_2806820_-	rpoE leader peptide RseD	NA	NA	NA	NA	NA
WP_000989177.1|2807083_2808706_+	L-aspartate oxidase	NA	NA	NA	NA	NA
WP_000083343.1|2808690_2809428_-|tRNA	tRNA(1)(Val) (adenine(37)-N(6))-methyltransferase TrmN	tRNA	NA	NA	NA	NA
WP_000219174.1|2809558_2810893_+	ATP-dependent RNA helicase SrmB	NA	A0A1B1IS59	uncultured_Mediterranean_phage	29.7	1.6e-43
WP_001526875.1|2810910_2811810_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000188414.1|2811912_2812500_+	cysteine/O-acetylserine transporter	NA	NA	NA	NA	NA
WP_000627811.1|2812561_2812945_-	autonomous glycyl radical cofactor GrcA	NA	Q7Y524	Enterobacteria_phage	74.0	6.1e-33
WP_000179978.1|2813263_2813953_+	uracil-DNA glycosylase	NA	A0A172DS90	Canid_alphaherpesvirus	49.5	4.6e-55
WP_000997368.1|2814068_2815106_-|tRNA	tRNA/rRNA methyltransferase	tRNA	NA	NA	NA	NA
2823010:2823026	attR	GTAGGCCGGATAAGGCG	NA	NA	NA	NA
>prophage 9
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	3364057	3419928	4879400	plate,tail,tRNA,terminase,capsid,portal,holin,integrase,head,lysis	Salmonella_phage(51.02%)	64	3399658:3399675	3401368:3401385
WP_001264394.1|3364057_3365071_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	59.5	2.8e-109
WP_001144069.1|3365298_3365514_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_000918865.1|3365749_3367495_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.4	2.1e-72
WP_001519776.1|3367644_3369492_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.7	8.4e-35
WP_000237776.1|3369615_3370122_-	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA	NA
WP_000468307.1|3370481_3370700_-	DNA-binding transcriptional regulator	NA	A0A2I8TV89	Erwinia_phage	98.6	9.5e-39
WP_000627822.1|3370766_3371936_-	phage late control D family protein	NA	A0A0M5M5V5	Salmonella_phage	97.7	6.6e-211
WP_000978859.1|3371932_3372418_-|tail	phage tail protein	tail	Q6K1G5	Salmonella_virus	99.4	3.9e-85
WP_000069526.1|3372432_3374874_-|tail	phage tail tape measure protein	tail	S4TP64	Salmonella_phage	91.6	0.0e+00
WP_085984508.1|3374866_3375022_-|tail	GpE family phage tail protein	tail	Q6K1G8	Salmonella_virus	98.0	8.8e-23
WP_001029726.1|3375018_3375354_-|tail	phage tail assembly protein	tail	S4TTB2	Salmonella_phage	100.0	1.4e-52
WP_001207675.1|3375416_3375935_-|tail	phage major tail tube protein	tail	S4TNZ0	Salmonella_phage	100.0	6.5e-94
WP_001279029.1|3375950_3377138_-|tail	phage tail sheath protein	tail	Q6K1H0	Salmonella_virus	99.5	2.9e-222
WP_086935187.1|3377306_3377927_-|tail	tail fiber assembly protein	tail	A0A1B0VCD0	Salmonella_phage	86.7	6.8e-98
WP_000104698.1|3377896_3379990_-|tail	tail fiber protein	tail	A0A1B0VFW4	Salmonella_phage	94.5	5.8e-218
WP_001000068.1|3380000_3380531_-|tail	phage tail protein I	tail	S4TTA8	Salmonella_phage	100.0	9.2e-104
WP_000246677.1|3380523_3381432_-|plate	baseplate assembly protein	plate	S4TNY7	Salmonella_phage	100.0	2.6e-162
WP_000127147.1|3381438_3381786_-	GPW/gp25 family protein	NA	S4TRW8	Salmonella_phage	99.1	1.6e-56
WP_001094750.1|3381782_3382424_-|plate	phage baseplate assembly protein V	plate	Q6K1H6	Salmonella_virus	100.0	4.8e-115
WP_001293104.1|3382492_3382942_-	phage virion morphogenesis protein	NA	A0A0M3UL83	Salmonella_phage	98.7	5.5e-73
WP_001169074.1|3382934_3383402_-|tail	phage tail protein	tail	S4TTA5	Salmonella_phage	100.0	1.1e-84
WP_077941258.1|3383364_3383538_-|lysis	phage lysis protein	lysis	S4TNY4	Salmonella_phage	96.5	3.1e-24
WP_000866104.1|3383509_3383923_-|lysis	LysB family phage lysis regulatory protein	lysis	S4TRW3	Salmonella_phage	99.3	2.9e-44
WP_001144118.1|3383919_3384417_-	glycoside hydrolase family 104 protein	NA	S4TUB1	Salmonella_phage	98.8	5.8e-92
WP_000134659.1|3384403_3384700_-|holin	phage holin family protein	holin	S4TP56	Salmonella_phage	100.0	4.4e-47
WP_000868400.1|3384703_3384907_-|tail	tail protein X	tail	A0A0M3ULF4	Salmonella_phage	100.0	3.6e-32
WP_000214256.1|3384906_3385413_-|head	head completion/stabilization protein	head	S4TNY1	Salmonella_phage	99.4	3.8e-91
WP_000203471.1|3385506_3386256_-|terminase	terminase endonuclease subunit	terminase	Q6K1I5	Salmonella_virus	97.2	6.4e-127
WP_001247240.1|3386259_3387327_-|capsid	phage major capsid protein, P2 family	capsid	A0A0M4R4W2	Salmonella_phage	99.2	1.3e-197
WP_001085931.1|3387403_3388258_-|capsid	capsid scaffolding protein	capsid	S4TP53	Salmonella_phage	98.6	1.2e-156
WP_000156060.1|3388423_3390193_+|terminase	terminase ATPase subunit family protein	terminase	S4TT96	Salmonella_phage	99.0	0.0e+00
WP_000517963.1|3390192_3391239_+|portal	phage portal protein	portal	S4TNX7	Salmonella_phage	98.6	4.8e-189
WP_001161212.1|3391671_3392610_+	hypothetical protein	NA	Q2P9W7	Enterobacteria_phage	77.6	9.8e-141
WP_000381893.1|3393072_3393804_-	hypothetical protein	NA	Q37850	Escherichia_phage	94.7	1.8e-129
WP_000373436.1|3393883_3394324_-	DinI family protein	NA	A0A218M4I0	Erwinia_phage	92.0	1.8e-65
WP_001266445.1|3394440_3396684_-	replication endonuclease	NA	A0A218M4H2	Erwinia_phage	95.3	0.0e+00
WP_001232572.1|3396674_3396956_-	DUF3850 domain-containing protein	NA	A0A0P0I3U9	Klebsiella_phage	52.6	2.0e-12
WP_000058620.1|3396952_3397225_-	DUF5405 family protein	NA	A0A218M4I8	Erwinia_phage	78.9	2.1e-35
WP_000849968.1|3397221_3397806_-	3'-5' exonuclease	NA	A0A1S6L012	Salmonella_phage	67.7	4.0e-68
WP_000752599.1|3397802_3398030_-	TraR/DksA family transcriptional regulator	NA	A0A0M4S5Q7	Salmonella_phage	91.7	2.0e-31
WP_000092339.1|3398029_3398263_-	DUF2732 domain-containing protein	NA	Q6K1F6	Salmonella_virus	88.3	4.3e-29
WP_000963463.1|3398327_3398666_-	DUF5347 domain-containing protein	NA	A0A218M4I7	Erwinia_phage	94.6	7.3e-54
WP_000920169.1|3398629_3398830_-	DUF2724 domain-containing protein	NA	Q6K1F7	Salmonella_virus	100.0	1.2e-32
WP_000459332.1|3398837_3399347_-	phage regulatory CII family protein	NA	A0A0M4QWN1	Salmonella_phage	98.8	6.2e-89
WP_000135596.1|3399377_3399641_-	hypothetical protein	NA	A0A218M4I5	Erwinia_phage	90.8	8.5e-42
3399658:3399675	attL	TTTGCCAATATTTGCCAT	NA	NA	NA	NA
WP_000345246.1|3399772_3400345_+	phage repressor protein CI	NA	A0A218M4J1	Erwinia_phage	93.1	1.1e-99
WP_000290960.1|3400344_3401367_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	87.9	3.5e-176
WP_000213760.1|3401583_3402351_-	siderophore-interacting protein	NA	NA	NA	NA	NA
3401368:3401385	attR	ATGGCAAATATTGGCAAA	NA	NA	NA	NA
WP_000983441.1|3402582_3403230_+	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000478472.1|3403226_3404792_-	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.9	1.0e-12
WP_000094651.1|3405179_3406700_-	PAS domain-containing methyl-accepting chemotaxis protein	NA	A0A1B0V854	Salmonella_phage	48.5	6.4e-33
WP_001520281.1|3407129_3408509_+	putrescine aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	29.0	2.9e-32
WP_000121523.1|3408679_3410698_+	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA	NA
WP_000019990.1|3410778_3411915_-	23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG	NA	NA	NA	NA	NA
WP_000202966.1|3412000_3412498_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_000951049.1|3412649_3413342_+	vancomycin high temperature exclusion protein	NA	NA	NA	NA	NA
WP_000617687.1|3413430_3414429_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_001098833.1|3414700_3415669_+	TerC family protein	NA	I7HPH5	Enterobacteria_phage	34.9	5.0e-39
WP_000235363.1|3415923_3417168_+	serine/threonine transporter SstT	NA	NA	NA	NA	NA
WP_000422143.1|3417617_3418280_+	DedA family protein	NA	NA	NA	NA	NA
WP_000917516.1|3418283_3418667_+	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA	NA
WP_000877297.1|3418811_3419180_+	DUF1090 domain-containing protein	NA	NA	NA	NA	NA
WP_000031219.1|3419221_3419527_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_000785626.1|3419529_3419928_+|holin	phage holin family protein	holin	NA	NA	NA	NA
>prophage 10
NC_016854	Salmonella enterica subsp. enterica serovar Typhimurium str. D23580, complete genome	4879400	4443151	4461045	4879400	plate,tail	Burkholderia_phage(47.37%)	22	NA	NA
WP_000368196.1|4443151_4444897_-|tail	tail fiber protein	tail	A0A0M3ULF6	Salmonella_phage	52.2	3.2e-52
WP_000359500.1|4444899_4445532_-|tail	phage tail protein I	tail	Q6QI98	Burkholderia_phage	56.4	6.6e-24
WP_000951736.1|4445524_4446640_-|plate	baseplate J/gp47 family protein	plate	Q6QI99	Burkholderia_phage	52.2	1.8e-101
WP_001093501.1|4446630_4446990_-	GPW/gp25 family protein	NA	Q6QIA0	Burkholderia_phage	64.2	2.8e-35
WP_001095011.1|4447153_4448701_-	membrane protein	NA	B9UDL6	Salmonella_phage	29.9	1.9e-48
WP_000703632.1|4448700_4449630_-	glycosyltransferase family 2 protein	NA	S5FKN0	Shigella_phage	83.8	8.8e-150
WP_000593182.1|4449626_4449989_-	GtrA family protein	NA	I1TED9	Salmonella_phage	70.8	1.2e-43
WP_000679398.1|4450316_4451039_-|plate	phage baseplate assembly protein V	plate	A0A067ZIM2	Vibrio_phage	41.0	3.3e-11
WP_000818154.1|4451048_4452092_-	phage late control D family protein	NA	Q6QIA2	Burkholderia_phage	45.1	2.5e-76
WP_001269716.1|4452079_4452289_-|tail	tail protein X	tail	A4JWL2	Burkholderia_virus	60.3	9.8e-17
WP_000271423.1|4452288_4453242_-	methyl-accepting chemotaxis protein	NA	A4JWL1	Burkholderia_virus	50.8	2.3e-36
WP_001262500.1|4453241_4455596_-|tail	phage tail tape measure protein	tail	A4JWL0	Burkholderia_virus	30.6	6.9e-66
WP_001185654.1|4455692_4455821_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_001003642.1|4455780_4456098_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_000907494.1|4456149_4456674_-|tail	phage major tail tube protein	tail	Q6QIA9	Burkholderia_phage	69.5	2.8e-68
WP_000729852.1|4456673_4458101_-|tail	phage tail sheath family protein	tail	A4JWK5	Burkholderia_virus	70.9	1.1e-194
WP_000875314.1|4458090_4458288_-	hypothetical protein	NA	Q6QIB1	Burkholderia_phage	52.9	8.6e-07
WP_000449433.1|4458284_4458740_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777266.1|4458899_4459214_-	membrane protein	NA	Q6QIC4	Burkholderia_phage	49.1	6.4e-20
WP_001270441.1|4459226_4459832_-	lytic transglycosylase domain-containing protein	NA	Q5ZQZ1	Pseudomonas_phage	59.9	2.5e-60
WP_001226442.1|4459834_4460122_-	membrane protein	NA	Q6QIC8	Burkholderia_phage	49.1	2.3e-16
WP_000615248.1|4460697_4461045_+	DNA-binding protein	NA	Q6QIE8	Burkholderia_phage	51.5	4.9e-21
