assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	1	43051-43249	1	PILER-CR	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	CCCGTCATTCCCGCGCAGGCGGGAATCTAGACCTTAGAACAACA	44	1	2	43206-43226|43206-43226	NC_017501.1_43253-43273|NC_017501.1_43835-43855	I-E	2	2	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA,NA|136aa|down_5|NC_017501.1_55639_56047_+,NA|53aa|down_9|NC_017501.1_63743_63902_+	NA|426aa|up_9|NC_017501.1_32765_34043_+	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|110aa|up_8|NC_017501.1_34114_34444_-	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|457aa|up_7|NC_017501.1_34519_35890_-	TIGR01173, Bifunctional_glmU_protein_	NA|326aa|up_6|NC_017501.1_35944_36922_-	TIGR01993, Suppressor_of_disruption_of_TFIIS, pyrimidine 5'-nucleotidase	NA|334aa|up_5|NC_017501.1_36980_37982_+	TIGR01254, Thiamine-binding_periplasmic_protein, ABC transporter periplasmic binding protein, thiB subfamily	NA|283aa|up_4|NC_017501.1_38075_38924_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|162aa|up_3|NC_017501.1_38949_39435_+	pfam02464, CinA, Competence-damaged protein	NA|523aa|up_2|NC_017501.1_39536_41105_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|422aa|up_1|NC_017501.1_41250_42516_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|95aa|up_0|NC_017501.1_42765_43050_+	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|1045aa|down_0|NC_017501.1_44570_47705_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|717aa|down_1|NC_017501.1_49965_52116_-	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|409aa|down_2|NC_017501.1_52401_53628_-	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|348aa|down_3|NC_017501.1_53790_54834_-	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|229aa|down_4|NC_017501.1_54953_55640_+	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins	NA|136aa|down_5|NC_017501.1_55639_56047_+	NA	NA|264aa|down_6|NC_017501.1_56095_56887_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|139aa|down_7|NC_017501.1_57034_57451_+	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|155aa|down_8|NC_017501.1_63250_63715_+	TIGR01259, ComE_operon_protein_1, comEA protein	NA|53aa|down_9|NC_017501.1_63743_63902_+	NA
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	2	48724-48911	2	PILER-CR	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	CGTCATTCCCGCGCAGGCGGGAATCTAGACATT	33	2	44	48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48757-48792|48826-48899|48826-48899	NC_017501.1_43668-43703|NC_017501.1_1952172-1952207|NC_017501.1_18236-18271|NC_017501.1_48189-48224|NC_017501.1_48461-48496|NC_017501.1_194900-194935|NC_017501.1_467098-467133|NC_017501.1_469039-469074|NC_017501.1_469205-469240|NC_017501.1_735049-735084|NC_017501.1_735520-735555|NC_017501.1_735893-735928|NC_017501.1_736024-736059|NC_017501.1_781127-781162|NC_017501.1_888118-888153|NC_017501.1_888418-888453|NC_017501.1_914344-914309|NC_017501.1_914655-914620|NC_017501.1_959556-959521|NC_017501.1_995791-995756|NC_017501.1_1383082-1383117|NC_017501.1_1433806-1433771|NC_017501.1_1434117-1434082|NC_017501.1_1434400-1434365|NC_017501.1_1480353-1480388|NC_017501.1_1481105-1481140|NC_017501.1_1481858-1481893|NC_017501.1_1642433-1642398|NC_017501.1_1729018-1728983|NC_017501.1_1956149-1956184|NC_017501.1_2074925-2074890|NC_017501.1_2101804-2101839|NC_017501.1_2106146-2106181|NC_017501.1_2159416-2159381|NC_017501.1_2159850-2159815|NC_017501.1_2162549-2162584|NC_017501.1_2254655-2254620|NC_017501.1_14185-14220|NC_017501.1_14336-14371|NC_017501.1_14536-14571|NC_017501.1_48034-48069|NC_017501.1_49383-49418|NC_017501.1_43358-43431|NC_017501.1_43716-43789	I-E	2	2	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA,NA|136aa|down_4|NC_017501.1_55639_56047_+,NA|53aa|down_8|NC_017501.1_63743_63902_+	NA|110aa|up_9|NC_017501.1_34114_34444_-	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|457aa|up_8|NC_017501.1_34519_35890_-	TIGR01173, Bifunctional_glmU_protein_	NA|326aa|up_7|NC_017501.1_35944_36922_-	TIGR01993, Suppressor_of_disruption_of_TFIIS, pyrimidine 5'-nucleotidase	NA|334aa|up_6|NC_017501.1_36980_37982_+	TIGR01254, Thiamine-binding_periplasmic_protein, ABC transporter periplasmic binding protein, thiB subfamily	NA|283aa|up_5|NC_017501.1_38075_38924_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|162aa|up_4|NC_017501.1_38949_39435_+	pfam02464, CinA, Competence-damaged protein	NA|523aa|up_3|NC_017501.1_39536_41105_-	PRK14018, PRK14018, bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	NA|422aa|up_2|NC_017501.1_41250_42516_+	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|95aa|up_1|NC_017501.1_42765_43050_+	cd10448, GIY-YIG_unchar_3, GIY-YIG domain of uncharacterized hypothetical protein found in bacteria	NA|1045aa|up_0|NC_017501.1_44570_47705_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|717aa|down_0|NC_017501.1_49965_52116_-	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein	NA|409aa|down_1|NC_017501.1_52401_53628_-	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|348aa|down_2|NC_017501.1_53790_54834_-	COG2805, PilT, Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|229aa|down_3|NC_017501.1_54953_55640_+	cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins	NA|136aa|down_4|NC_017501.1_55639_56047_+	NA	NA|264aa|down_5|NC_017501.1_56095_56887_+	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed	NA|139aa|down_6|NC_017501.1_57034_57451_+	TIGR02420, RNA_polymerase-binding_transcription_factor_DksA, RNA polymerase-binding protein DksA	NA|155aa|down_7|NC_017501.1_63250_63715_+	TIGR01259, ComE_operon_protein_1, comEA protein	NA|53aa|down_8|NC_017501.1_63743_63902_+	NA	NA|374aa|down_9|NC_017501.1_63983_65105_+	PRK10767, PRK10767, chaperone protein DnaJ; Provisional
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	3	224272-224378	1	CRISPRCasFinder	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	TTTATCGGAAATGACCGAAACTCAA	25	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA|74aa|up_1|NC_017501.1_220406_220628_-,NA|47aa|down_0|NC_017501.1_225536_225677_+,NA|60aa|down_6|NC_017501.1_231613_231793_+,NA|93aa|down_7|NC_017501.1_231930_232209_+,NA|94aa|down_8|NC_017501.1_232341_232623_+	NA|280aa|up_9|NC_017501.1_206994_207834_-	COG2878, COG2878, Predicted NADH:ubiquinone oxidoreductase, subunit RnfB [Energy production and conversion]	NA|659aa|up_8|NC_017501.1_207982_209959_+	PRK03562, PRK03562, glutathione-regulated potassium-efflux system protein KefC; Provisional	NA|33aa|up_7|NC_017501.1_210855_210954_+	COG2510, COG2510, Predicted membrane protein [Function unknown]	NA|462aa|up_6|NC_017501.1_211024_212410_-	TIGR00720, hypothetical_protein_NEICINOT_00681, L-serine dehydratase, iron-sulfur-dependent, single chain form	NA|797aa|up_5|NC_017501.1_212508_214899_-	PRK14939, gyrB, DNA gyrase subunit B; Provisional	NA|291aa|up_4|NC_017501.1_215168_216041_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|679aa|up_3|NC_017501.1_216128_218165_+	COG0339, Dcp, Zn-dependent oligopeptidases [Amino acid transport and metabolism]	NA|189aa|up_2|NC_017501.1_218839_219406_-	COG1971, COG1971, Predicted membrane protein [Function unknown]	NA|74aa|up_1|NC_017501.1_220406_220628_-	NA	NA|505aa|up_0|NC_017501.1_220703_222218_-	cd08156, catalase_clade_3, Clade 3 of the heme-binding enzyme catalase	NA|47aa|down_0|NC_017501.1_225536_225677_+	NA	NA|406aa|down_1|NC_017501.1_225879_227097_-	cd17355, MFS_YcxA_like, MFS-type transporter YcxA and similar proteins of the Major Facilitator Superfamily of transporters	NA|318aa|down_2|NC_017501.1_227524_228478_+	COG0385, COG0385, Predicted Na+-dependent transporter [General function prediction only]	NA|416aa|down_3|NC_017501.1_228719_229967_-	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II	NA|79aa|down_4|NC_017501.1_230122_230359_-	PRK00982, acpP, acyl carrier protein; Provisional	NA|336aa|down_5|NC_017501.1_230590_231598_+	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase	NA|60aa|down_6|NC_017501.1_231613_231793_+	NA	NA|93aa|down_7|NC_017501.1_231930_232209_+	NA	NA|94aa|down_8|NC_017501.1_232341_232623_+	NA	NA|158aa|down_9|NC_017501.1_232675_233149_+	COG4304, COG4304, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	4	489808-489978	2	CRISPRCasFinder	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	CGCCTGCGCGGGAATGACGGGAT	23	1	22	489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881|489831-489881	NC_017501.1_44123-44173|NC_017501.1_48264-48314|NC_017501.1_486740-486790|NC_017501.1_487244-487294|NC_017501.1_487652-487702|NC_017501.1_488663-488713|NC_017501.1_496847-496897|NC_017501.1_497280-497330|NC_017501.1_1659015-1658965|NC_017501.1_1956224-1956274|NC_017501.1_48560-48610|NC_017501.1_48987-49037|NC_017501.1_49657-49707|NC_017501.1_483889-483939|NC_017501.1_484472-484522|NC_017501.1_489268-489318|NC_017501.1_497885-497935|NC_017501.1_830610-830660|NC_017501.1_836791-836841|NC_017501.1_837271-837321|NC_017501.1_1659254-1659204|NC_017501.1_2164749-2164699	I-E	2	2	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA|141aa|up_6|NC_017501.1_478211_478634_+,NA	NA|256aa|up_9|NC_017501.1_475991_476759_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|126aa|up_8|NC_017501.1_476958_477336_+	PRK00070, acpS, 4'-phosphopantetheinyl transferase; Provisional	NA|270aa|up_7|NC_017501.1_477409_478219_+	PRK08999, PRK08999, Nudix family hydrolase	NA|141aa|up_6|NC_017501.1_478211_478634_+	NA	NA|381aa|up_5|NC_017501.1_478682_479825_+	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|273aa|up_4|NC_017501.1_480125_480944_-	COG3177, COG3177, Fic family protein [Function unknown]	NA|417aa|up_3|NC_017501.1_481023_482274_-	PRK10319, PRK10319, N-acetylmuramoyl-L-alanine amidase AmiA	NA|154aa|up_2|NC_017501.1_482270_482732_-	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only]	NA|271aa|up_1|NC_017501.1_482918_483731_+	PRK00865, PRK00865, glutamate racemase; Provisional	NA|370aa|up_0|NC_017501.1_485081_486191_-	COG3177, COG3177, Fic family protein [Function unknown]	NA|721aa|down_0|NC_017501.1_490076_492239_+	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	NA|915aa|down_1|NC_017501.1_492324_495069_+	TIGR01776, Lactoferrin-binding_protein_A, TonB-dependent lactoferrin and transferrin receptors	NA|381aa|down_2|NC_017501.1_498802_499945_-	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold	NA|88aa|down_3|NC_017501.1_500247_500511_+	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed	NA|383aa|down_4|NC_017501.1_500671_501820_+	COG2829, PldA, Outer membrane phospholipase A [Cell envelope biogenesis, outer membrane]	NA|234aa|down_5|NC_017501.1_501962_502664_+	COG2928, COG2928, Uncharacterized conserved protein [Function unknown]	NA|603aa|down_6|NC_017501.1_502721_504530_+	PRK00476, aspS, aspartyl-tRNA synthetase; Validated	NA|95aa|down_7|NC_017501.1_504680_504965_+	pfam13670, PepSY_2, Peptidase propeptide and YPEB domain	NA|631aa|down_8|NC_017501.1_505131_507024_+	COG1166, SpeA, Arginine decarboxylase (spermidine biosynthesis) [Amino acid transport and metabolism]	NA|308aa|down_9|NC_017501.1_507122_508046_+	PRK02190, PRK02190, agmatinase; Provisional
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	5	850795-850949	3	CRISPRCasFinder	no	DEDDh	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Unclear	GTCGGCGATGTTGGCGCAGCGGCTTAATTGCAGCGAGGCCGCGTTGCGGCGG	52	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA,NA	NA|946aa|up_9|NC_017501.1_833585_836423_+	TIGR01776, Lactoferrin-binding_protein_A, TonB-dependent lactoferrin and transferrin receptors	NA|335aa|up_8|NC_017501.1_837741_838746_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|643aa|up_7|NC_017501.1_838892_840821_-	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|591aa|up_6|NC_017501.1_841007_842780_-	PRK05667, dnaG, DNA primase; Validated	NA|917aa|up_5|NC_017501.1_842925_845676_-	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed	NA|141aa|up_4|NC_017501.1_845806_846229_+	pfam05258, DUF721, Protein of unknown function (DUF721)	NA|184aa|up_3|NC_017501.1_846510_847062_+	COG3241, COG3241, Azurin [Energy production and conversion]	NA|170aa|up_2|NC_017501.1_847156_847666_+	cd12108, Hr-like, Hemerythrin-like domain	NA|207aa|up_1|NC_017501.1_847699_848320_+	pfam10786, G6PD_bact, Glucose-6-phosphate 1-dehydrogenase (EC 1	NA|382aa|up_0|NC_017501.1_848433_849579_+	PRK13009, PRK13009, succinyl-diaminopimelate desuccinylase; Reviewed	NA|251aa|down_0|NC_017501.1_851555_852308_+	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair]	NA|337aa|down_1|NC_017501.1_852704_853715_+	TIGR02195, ADP-heptose--LPS_heptosyltransferase_2, lipopolysaccharide heptosyltransferase II	NA|149aa|down_2|NC_017501.1_853769_854216_+	PRK05422, smpB, SsrA-binding protein SmpB	NA|456aa|down_3|NC_017501.1_856940_858308_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|79aa|down_4|NC_017501.1_858417_858654_-	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit	NA|161aa|down_5|NC_017501.1_859126_859609_+	COG1047, SlpA, FKBP-type peptidyl-prolyl cis-trans isomerases 2 [Posttranslational modification, protein turnover, chaperones]	NA|271aa|down_6|NC_017501.1_859695_860508_+	TIGR03464, HpnC, squalene synthase HpnC	NA|157aa|down_7|NC_017501.1_860579_861050_-	pfam08897, DUF1841, Domain of unknown function (DUF1841)	NA|614aa|down_8|NC_017501.1_861140_862982_+	COG4232, COG4232, Thiol:disulfide interchange protein [Posttranslational modification, protein turnover, chaperones / Energy production and conversion]	NA|399aa|down_9|NC_017501.1_863617_864814_-	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	6	1472936-1473115	3	PILER-CR	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	CCCCAACATAAAATTCGTCATTCCCGCGCAGGCGGGAATCTAG	43	1	4	1472979-1473008|1472979-1473008|1472979-1473008|1472979-1473008	NC_017501.1_495474-495503|NC_017501.1_495778-495807|NC_017501.1_1659332-1659303|NC_017501.1_883516-883487	I-E	2	2	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA|1069aa|up_9|NC_017501.1_1451969_1455176_-,NA|131aa|up_8|NC_017501.1_1455187_1455580_-,NA|300aa|up_7|NC_017501.1_1455579_1456479_-,NA|142aa|up_6|NC_017501.1_1456471_1456897_-,NA|136aa|up_5|NC_017501.1_1456908_1457316_-,NA|111aa|down_8|NC_017501.1_1483002_1483335_-	NA|1069aa|up_9|NC_017501.1_1451969_1455176_-	NA	NA|131aa|up_8|NC_017501.1_1455187_1455580_-	NA	NA|300aa|up_7|NC_017501.1_1455579_1456479_-	NA	NA|142aa|up_6|NC_017501.1_1456471_1456897_-	NA	NA|136aa|up_5|NC_017501.1_1456908_1457316_-	NA	NA|399aa|up_4|NC_017501.1_1466214_1467411_-	PTZ00491, PTZ00491, major vault protein; Provisional	NA|399aa|up_3|NC_017501.1_1467674_1468871_-	PRK09692, PRK09692, integrase; Provisional	NA|260aa|up_2|NC_017501.1_1469402_1470182_-	PRK02101, PRK02101, peroxide stress protein YaaA	NA|396aa|up_1|NC_017501.1_1470344_1471532_-	PRK09147, PRK09147, succinyldiaminopimelate transaminase; Provisional	NA|151aa|up_0|NC_017501.1_1471608_1472061_-	PRK00601, dut, dUTP diphosphatase	NA|158aa|down_0|NC_017501.1_1474309_1474783_-	pfam11530, Pilin_PilX, Minor type IV pilin, PilX	NA|200aa|down_1|NC_017501.1_1474787_1475387_-	COG4726, PilX, Tfp pilus assembly protein PilX [Cell motility and secretion / Intracellular trafficking and secretion]	NA|322aa|down_2|NC_017501.1_1475365_1476331_-	COG4966, PilW, Tfp pilus assembly protein PilW [Cell motility and secretion / Intracellular trafficking and secretion]	NA|207aa|down_3|NC_017501.1_1476327_1476948_-	COG4967, PilV, Tfp pilus assembly protein PilV [Cell motility and secretion / Intracellular trafficking and secretion]	NA|222aa|down_4|NC_017501.1_1476980_1477646_-	COG4970, FimT, Tfp pilus assembly protein FimT [Cell motility and secretion / Intracellular trafficking and secretion]	NA|469aa|down_5|NC_017501.1_1477954_1479361_-	TIGR00665, DnaB, replicative DNA helicase	NA|196aa|down_6|NC_017501.1_1479523_1480111_+	COG0605, SodA, Superoxide dismutase [Inorganic ion transport and metabolism]	NA|170aa|down_7|NC_017501.1_1482162_1482672_-	COG1755, COG1755, Uncharacterized protein conserved in bacteria [Function unknown]	NA|111aa|down_8|NC_017501.1_1483002_1483335_-	NA	NA|279aa|down_9|NC_017501.1_1483625_1484462_+	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	7	1582563-1582703	4	CRISPRCasFinder	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	TATAGTGGATTAACAAAAACCAGTACAGCGTTGCCTCGCCTT	42	1	146	1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661|1582605-1582661	NC_017501.1_28745-28801|NC_017501.1_97672-97728|NC_017501.1_188502-188558|NC_017501.1_227175-227231|NC_017501.1_228550-228606|NC_017501.1_249646-249590|NC_017501.1_276472-276528|NC_017501.1_277534-277590|NC_017501.1_296644-296588|NC_017501.1_312124-312180|NC_017501.1_323630-323686|NC_017501.1_343249-343305|NC_017501.1_346060-346004|NC_017501.1_393154-393098|NC_017501.1_397135-397079|NC_017501.1_399651-399707|NC_017501.1_415033-415089|NC_017501.1_468669-468725|NC_017501.1_469576-469632|NC_017501.1_480003-479947|NC_017501.1_498617-498673|NC_017501.1_641246-641302|NC_017501.1_642262-642318|NC_017501.1_646380-646436|NC_017501.1_651826-651882|NC_017501.1_756897-756953|NC_017501.1_795192-795136|NC_017501.1_887125-887181|NC_017501.1_897928-897984|NC_017501.1_899617-899561|NC_017501.1_904530-904586|NC_017501.1_913954-913898|NC_017501.1_918066-918010|NC_017501.1_956020-956076|NC_017501.1_960338-960282|NC_017501.1_962457-962513|NC_017501.1_973985-973929|NC_017501.1_975378-975434|NC_017501.1_1002295-1002351|NC_017501.1_1009628-1009684|NC_017501.1_1048981-1048925|NC_017501.1_1049377-1049321|NC_017501.1_1057208-1057264|NC_017501.1_1140737-1140681|NC_017501.1_1159549-1159493|NC_017501.1_1242268-1242324|NC_017501.1_1244675-1244619|NC_017501.1_1246564-1246508|NC_017501.1_1309341-1309285|NC_017501.1_1313704-1313648|NC_017501.1_1328167-1328111|NC_017501.1_1340468-1340524|NC_017501.1_1371820-1371764|NC_017501.1_1472666-1472722|NC_017501.1_1481553-1481609|NC_017501.1_1505618-1505674|NC_017501.1_1515494-1515438|NC_017501.1_1591118-1591174|NC_017501.1_1601155-1601211|NC_017501.1_1613012-1612956|NC_017501.1_1613755-1613811|NC_017501.1_1626770-1626826|NC_017501.1_1631155-1631099|NC_017501.1_1658551-1658607|NC_017501.1_1659681-1659625|NC_017501.1_1681288-1681344|NC_017501.1_1720545-1720489|NC_017501.1_1728305-1728361|NC_017501.1_1729521-1729577|NC_017501.1_1731487-1731431|NC_017501.1_1741446-1741390|NC_017501.1_1795172-1795228|NC_017501.1_1795912-1795968|NC_017501.1_1897950-1897894|NC_017501.1_1928485-1928541|NC_017501.1_1929406-1929350|NC_017501.1_1971179-1971235|NC_017501.1_1974975-1974919|NC_017501.1_1994167-1994223|NC_017501.1_2060446-2060502|NC_017501.1_2092944-2092888|NC_017501.1_2101204-2101148|NC_017501.1_2105978-2106034|NC_017501.1_2106391-2106447|NC_017501.1_2151086-2151030|NC_017501.1_2153302-2153358|NC_017501.1_2162935-2162991|NC_017501.1_2189909-2189965|NC_017501.1_2198274-2198218|NC_017501.1_2205909-2205853|NC_017501.1_2257146-2257090|NC_017501.1_16408-16464|NC_017501.1_52189-52245|NC_017501.1_435975-435919|NC_017501.1_518497-518553|NC_017501.1_634271-634215|NC_017501.1_648052-647996|NC_017501.1_677384-677328|NC_017501.1_686130-686074|NC_017501.1_692001-692057|NC_017501.1_823853-823797|NC_017501.1_824511-824455|NC_017501.1_871559-871615|NC_017501.1_872318-872262|NC_017501.1_921910-921854|NC_017501.1_977181-977125|NC_017501.1_995057-995113|NC_017501.1_1102447-1102391|NC_017501.1_1112928-1112984|NC_017501.1_1180364-1180308|NC_017501.1_1276915-1276859|NC_017501.1_1308982-1308926|NC_017501.1_1318293-1318349|NC_017501.1_1362710-1362654|NC_017501.1_1374035-1373979|NC_017501.1_1425247-1425191|NC_017501.1_1477716-1477772|NC_017501.1_1722257-1722313|NC_017501.1_1788961-1788905|NC_017501.1_1819967-1819911|NC_017501.1_1821821-1821765|NC_017501.1_1865140-1865084|NC_017501.1_1877896-1877840|NC_017501.1_1895636-1895580|NC_017501.1_1973093-1973037|NC_017501.1_2008752-2008696|NC_017501.1_2029673-2029729|NC_017501.1_2040794-2040850|NC_017501.1_2053127-2053183|NC_017501.1_2057704-2057760|NC_017501.1_2070587-2070531|NC_017501.1_2161894-2161950|NC_017501.1_2162658-2162714|NC_017501.1_2165024-2165080|NC_017501.1_2198690-2198634|NC_017501.1_2221746-2221690|NC_017501.1_191786-191842|NC_017501.1_470921-470865|NC_017501.1_651616-651560|NC_017501.1_781454-781510|NC_017501.1_863455-863399|NC_017501.1_883093-883037|NC_017501.1_1362294-1362238|NC_017501.1_1667765-1667709|NC_017501.1_2079329-2079273|NC_017501.1_2254989-2254933	NA	1	1	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA,NA|202aa|down_1|NC_017501.1_1584098_1584704_-,NA|99aa|down_3|NC_017501.1_1585688_1585985_+	NA|104aa|up_9|NC_017501.1_1573447_1573759_-	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family	NA|72aa|up_8|NC_017501.1_1573859_1574075_-	COG3042, Hlx, Putative hemolysin [General function prediction only]	NA|260aa|up_7|NC_017501.1_1574100_1574880_-	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair]	NA|117aa|up_6|NC_017501.1_1574884_1575235_-	COG3215, PilZ, Tfp pilus assembly protein PilZ [Cell motility and secretion / Intracellular trafficking and secretion]	NA|326aa|up_5|NC_017501.1_1575238_1576216_-	PRK08699, PRK08699, DNA polymerase III subunit delta'; Validated	NA|377aa|up_4|NC_017501.1_1576249_1577380_-	COG5008, PilU, Tfp pilus assembly protein, ATPase PilU [Cell motility and secretion / Intracellular trafficking and secretion]	NA|234aa|up_3|NC_017501.1_1577547_1578249_+	PRK05584, PRK05584, 5'-methylthioadenosine/adenosylhomocysteine nucleosidase	NA|598aa|up_2|NC_017501.1_1578391_1580185_+	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	NA|340aa|up_1|NC_017501.1_1580327_1581347_+	PRK10861, PRK10861, signal peptidase I	NA|302aa|up_0|NC_017501.1_1581501_1582407_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|311aa|down_0|NC_017501.1_1582972_1583905_-	TIGR01139, Cysteine_synthase, cysteine synthase A	NA|202aa|down_1|NC_017501.1_1584098_1584704_-	NA	NA|284aa|down_2|NC_017501.1_1584700_1585552_-	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|99aa|down_3|NC_017501.1_1585688_1585985_+	NA	NA|223aa|down_4|NC_017501.1_1585998_1586667_+	COG2836, COG2836, Uncharacterized conserved protein [Function unknown]	NA|707aa|down_5|NC_017501.1_1586738_1588859_-	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|288aa|down_6|NC_017501.1_1589095_1589959_-	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional	NA|288aa|down_7|NC_017501.1_1590158_1591022_+	TIGR01214, dTDP-4-keto-L-rhamnose_reductase, dTDP-4-dehydrorhamnose reductase	NA|78aa|down_8|NC_017501.1_1591546_1591780_-	pfam05768, DUF836, Glutaredoxin-like domain (DUF836)	NA|67aa|down_9|NC_017501.1_1591945_1592146_-	COG2906, Bfd, Bacterioferritin-associated ferredoxin [Inorganic ion transport and metabolism]
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	8	1894868-1894966	5	CRISPRCasFinder	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	GCCGTCATTCCCGCGCAGGCAGAAATCCA	29	0	0	NA	NA	I-E	1	1	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA,NA|65aa|down_8|NC_017501.1_1905806_1906001_+	NA|396aa|up_9|NC_017501.1_1882029_1883217_-	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|651aa|up_8|NC_017501.1_1883209_1885162_-	COG1333, ResB, ResB protein required for cytochrome c biosynthesis [Posttranslational modification, protein turnover, chaperones]	NA|208aa|up_7|NC_017501.1_1885438_1886062_-	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|210aa|up_6|NC_017501.1_1886267_1886897_+	PRK00454, engB, GTP-binding protein YsxC; Reviewed	NA|799aa|up_5|NC_017501.1_1887017_1889414_-	COG5009, MrcA, Membrane carboxypeptidase/penicillin-binding protein [Cell envelope biogenesis, outer membrane]	NA|372aa|up_4|NC_017501.1_1889565_1890681_+	COG4972, PilM, Tfp pilus assembly protein, ATPase PilM [Cell motility and secretion / Intracellular trafficking and secretion]	NA|200aa|up_3|NC_017501.1_1890683_1891283_+	COG3166, PilN, Tfp pilus assembly protein PilN [Cell motility and secretion / Intracellular trafficking and secretion]	NA|216aa|up_2|NC_017501.1_1891283_1891931_+	COG3167, PilO, Tfp pilus assembly protein PilO [Cell motility and secretion / Intracellular trafficking and secretion]	NA|182aa|up_1|NC_017501.1_1891948_1892494_+	COG3168, PilP, Tfp pilus assembly protein PilP [Cell motility and secretion / Intracellular trafficking and secretion]	NA|762aa|up_0|NC_017501.1_1892512_1894798_+	COG4796, HofQ, Type II secretory pathway, component HofQ [Intracellular trafficking and secretion]	NA|171aa|down_0|NC_017501.1_1895975_1896488_+	PRK00131, aroK, shikimate kinase; Reviewed	NA|360aa|down_1|NC_017501.1_1896567_1897647_+	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed	NA|281aa|down_2|NC_017501.1_1899248_1900091_+	pfam13230, GATase_4, Glutamine amidotransferases class-II	NA|155aa|down_3|NC_017501.1_1900119_1900584_+	COG1327, COG1327, Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription]	NA|370aa|down_4|NC_017501.1_1900615_1901725_+	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|474aa|down_5|NC_017501.1_1901919_1903341_+	COG2244, RfbX, Membrane protein involved in the export of O-antigen and teichoic acid [General function prediction only]	NA|526aa|down_6|NC_017501.1_1903508_1905086_+	PRK12767, PRK12767, carbamoyl phosphate synthase-like protein; Provisional	NA|229aa|down_7|NC_017501.1_1905072_1905759_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|65aa|down_8|NC_017501.1_1905806_1906001_+	NA	NA|392aa|down_9|NC_017501.1_1906229_1907405_+	COG0399, WecE, Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	9	1921685-1923370	4,6,1,5,6,7	PILER-CR,CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas9,cas1,cas2	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	 or Type II-C?,Type II-A,Type II-C,Type II-B, Type II-B	ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC,ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC,ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC,GATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAACTTAAATTCACGCGCCAC,ATAATATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAACGT,ATTGTAGCACTGCGAAATGAGAAAGGGAGCTACAAC	36,36,36,54,43,36	4	18	1922183-1922212|1922315-1922344|1922447-1922476|1922447-1922476|1922447-1922476|1922447-1922476|1922447-1922476|1922447-1922476|1922447-1922476|1922447-1922476|1922465-1922493|1922465-1922493|1922465-1922493|1922465-1922493|1922465-1922493|1922465-1922493|1922465-1922493|1922465-1922493	NC_017501.1_1845547-1845576|NC_017501.1_1740478-1740449|NC_017501.1_849801-849772|NC_017501.1_850115-850086|NC_017501.1_1959423-1959394|NC_017501.1_1959714-1959685|NC_017501.1_1960585-1960556|NC_017501.1_1960860-1960831|NC_017501.1_1961135-1961106|NC_017501.1_2131524-2131553|NC_017501.1_849801-849773|NC_017501.1_850115-850087|NC_017501.1_1959423-1959395|NC_017501.1_1959714-1959686|NC_017501.1_1960585-1960557|NC_017501.1_1960860-1960832|NC_017501.1_1961135-1961107|NC_017501.1_2131524-2131552	NA:NA:NA:NA:NA:NA	17,25,25,17,17,17	25	orTypeII-C?,TypeII-A,TypeII-C,TypeII-B,TypeII-B	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA|134aa|up_6|NC_017501.1_1911906_1912308_-,NA|68aa|up_5|NC_017501.1_1912412_1912616_-,NA|112aa|down_0|NC_017501.1_1925002_1925338_-,NA|112aa|down_1|NC_017501.1_1925930_1926266_-	NA|637aa|up_9|NC_017501.1_1907452_1909363_+	COG1086, COG1086, Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]	NA|431aa|up_8|NC_017501.1_1909418_1910711_+	COG3977, COG3977, Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]	NA|279aa|up_7|NC_017501.1_1910762_1911599_-	COG0613, COG0613, Predicted metal-dependent phosphoesterases (PHP family) [General function prediction only]	NA|134aa|up_6|NC_017501.1_1911906_1912308_-	NA	NA|68aa|up_5|NC_017501.1_1912412_1912616_-	NA	NA|105aa|up_4|NC_017501.1_1912593_1912908_-	COG2501, COG2501, S4-like RNA binding protein [Replication, recombination, and repair]	NA|1145aa|up_3|NC_017501.1_1913359_1916794_+	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	cas9|1083aa|up_2|NC_017501.1_1917072_1920321_+	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	cas1|305aa|up_1|NC_017501.1_1920387_1921302_+	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas2|109aa|up_0|NC_017501.1_1921294_1921621_+	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	NA|112aa|down_0|NC_017501.1_1925002_1925338_-	NA	NA|112aa|down_1|NC_017501.1_1925930_1926266_-	NA	NA|164aa|down_2|NC_017501.1_1927852_1928344_-	pfam07946, DUF1682, Protein of unknown function (DUF1682)	NA|112aa|down_3|NC_017501.1_1928699_1929035_-	pfam01051, Rep_3, Initiator Replication protein	NA|311aa|down_4|NC_017501.1_1929489_1930422_-	COG2819, COG2819, Predicted hydrolase of the alpha/beta superfamily [General function prediction only]	NA|719aa|down_5|NC_017501.1_1930491_1932648_-	COG4773, FhuE, Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid [Inorganic ion transport and metabolism]	NA|220aa|down_6|NC_017501.1_1932807_1933467_+	cd07533, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily, similar to Parvibaculum lavamentivorans  HAD-superfamily hydrolase, subfamily IA, variant 1	NA|323aa|down_7|NC_017501.1_1933554_1934523_-	PRK01045, ispH, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Reviewed	NA|169aa|down_8|NC_017501.1_1934541_1935048_-	PRK00376, lspA, lipoprotein signal peptidase	NA|930aa|down_9|NC_017501.1_1936153_1938943_-	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	10	1952270-1952367	7	CRISPRCasFinder	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	CGTCATTCCCGCGCAGGCGGGAATCCAGAC	30	0	0	NA	NA	I-E	1	1	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA,NA|118aa|down_1|NC_017501.1_1957416_1957770_-,NA|146aa|down_4|NC_017501.1_1960925_1961363_-,NA|214aa|down_5|NC_017501.1_1961524_1962166_+	NA|432aa|up_9|NC_017501.1_1940530_1941826_-	PRK05912, PRK05912, tyrosyl-tRNA synthetase; Validated	NA|623aa|up_8|NC_017501.1_1941888_1943757_-	COG1835, COG1835, Predicted acyltransferases [Lipid metabolism]	NA|364aa|up_7|NC_017501.1_1944122_1945214_-	PRK09601, PRK09601, redox-regulated ATPase YchF	NA|559aa|up_6|NC_017501.1_1945328_1947005_-	pfam01268, FTHFS, Formate--tetrahydrofolate ligase	NA|144aa|up_5|NC_017501.1_1947179_1947611_+	COG2510, COG2510, Predicted membrane protein [Function unknown]	NA|232aa|up_4|NC_017501.1_1947856_1948552_-	cd06422, NTP_transferase_like_1, NTP_transferase_like_1 is a member of the nucleotidyl transferase family	NA|167aa|up_3|NC_017501.1_1948567_1949068_-	TIGR02296, HpaC, 4-hydroxyphenylacetate 3-monooxygenase, reductase component	NA|147aa|up_2|NC_017501.1_1949182_1949623_-	TIGR02337, Homoprotocatechuate_degradative_operon_repressor	NA|170aa|up_1|NC_017501.1_1949965_1950475_-	cd03011, TlpA_like_ScsD_MtbDsbE, TlpA-like family, suppressor for copper sensitivity D protein (ScsD) and actinobacterial DsbE homolog subfamily; composed of ScsD, the DsbE homolog of Mycobacterium tuberculosis (MtbDsbE) and similar proteins, all containing a redox-active CXXC motif	NA|360aa|up_0|NC_017501.1_1950839_1951919_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|1026aa|down_0|NC_017501.1_1952694_1955772_+	COG3419, PilY1, Tfp pilus assembly protein, tip-associated adhesin PilY1 [Cell motility and secretion / Intracellular trafficking and secretion]	NA|118aa|down_1|NC_017501.1_1957416_1957770_-	NA	NA|378aa|down_2|NC_017501.1_1958039_1959173_+	PRK12564, PRK12564, carbamoyl-phosphate synthase small subunit	NA|130aa|down_3|NC_017501.1_1959917_1960307_+	COG2852, COG2852, Very-short-patch-repair endonuclease [Replication, recombination,    and repair]	NA|146aa|down_4|NC_017501.1_1960925_1961363_-	NA	NA|214aa|down_5|NC_017501.1_1961524_1962166_+	NA	NA|1072aa|down_6|NC_017501.1_1962194_1965410_+	PRK05294, carB, carbamoyl-phosphate synthase large subunit	NA|300aa|down_7|NC_017501.1_1965637_1966537_-	cd08478, PBP2_CrgA, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA, contains the type 2 periplasmic binding domain	NA|193aa|down_8|NC_017501.1_1966775_1967354_+	COG2249, MdaB, Putative NADPH-quinone reductase (modulator of drug activity B) [General function prediction only]	NA|347aa|down_9|NC_017501.1_1967724_1968765_-	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	11	2074799-2074882	8	CRISPRCasFinder	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	CCGTCATTCCCGCGAAAGCGGGAATCTAG	29	1	6	2074828-2074853|2074828-2074853|2074828-2074853|2074828-2074853|2074828-2074853|2074828-2074853	NC_017501.1_1480469-1480444|NC_017501.1_1481221-1481196|NC_017501.1_1481974-1481949|NC_017501.1_1642546-1642571|NC_017501.1_959170-959195|NC_017501.1_1641901-1641926	I-E	1	1	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA|130aa|up_2|NC_017501.1_2068296_2068686_+,NA|67aa|up_1|NC_017501.1_2068694_2068895_+,NA	NA|276aa|up_9|NC_017501.1_2063042_2063870_-	COG2853, VacJ, Surface lipoprotein [Cell envelope biogenesis, outer membrane]	NA|93aa|up_8|NC_017501.1_2063866_2064145_-	COG3113, COG3113, Predicted NTP binding protein (contains STAS domain) [General function prediction only]	NA|197aa|up_7|NC_017501.1_2064201_2064792_-	COG2854, Ttg2D, ABC-type transport system involved in resistance to organic solvents, auxiliary component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|165aa|up_6|NC_017501.1_2064828_2065323_-	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD	NA|259aa|up_5|NC_017501.1_2065373_2066150_-	COG0767, Ttg2B, ABC-type transport system involved in resistance to organic solvents, permease component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|267aa|up_4|NC_017501.1_2066198_2066999_-	COG1127, Ttg2A, ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|306aa|up_3|NC_017501.1_2067171_2068089_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|130aa|up_2|NC_017501.1_2068296_2068686_+	NA	NA|67aa|up_1|NC_017501.1_2068694_2068895_+	NA	NA|481aa|up_0|NC_017501.1_2068929_2070372_+	cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like	NA|594aa|down_0|NC_017501.1_2075706_2077488_+	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism]	NA|506aa|down_1|NC_017501.1_2077548_2079066_-	pfam04575, DUF560, Protein of unknown function (DUF560)	NA|545aa|down_2|NC_017501.1_2081211_2082846_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|97aa|down_3|NC_017501.1_2082938_2083229_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|218aa|down_4|NC_017501.1_2083456_2084110_+	COG3676, COG3676, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|512aa|down_5|NC_017501.1_2084322_2085858_+	cd10334, SLC6sbd_u1, uncharacterized bacterial and archaeal solute carrier 6 subfamily; solute-binding domain	NA|31aa|down_6|NC_017501.1_2085854_2085947_+	pfam16951, MaAIMP_sms, Putative methionine and alanine importer, small subunit	NA|407aa|down_7|NC_017501.1_2086006_2087227_-	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase	NA|57aa|down_8|NC_017501.1_2087237_2087408_-	pfam13627, LPAM_2, Prokaryotic lipoprotein-attachment site	NA|108aa|down_9|NC_017501.1_2087478_2087802_+	PRK00446, cyaY, frataxin-like protein; Provisional
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	12	2159113-2159217	9	CRISPRCasFinder	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	CCGTCATTCCTACGAAAGTGGGAATC	26	0	0	NA	NA	I-E	1	1	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA,NA|70aa|down_7|NC_017501.1_2169547_2169757_+	NA|200aa|up_9|NC_017501.1_2148693_2149293_-	cd03379, beta_CA_cladeD, Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site	NA|514aa|up_8|NC_017501.1_2149321_2150863_-	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]	NA|462aa|up_7|NC_017501.1_2151255_2152641_+	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism]	NA|173aa|up_6|NC_017501.1_2152660_2153179_+	TIGR01313, Thermosensitive_gluconokinase, carbohydrate kinase, thermoresistant glucokinase family	NA|306aa|up_5|NC_017501.1_2153517_2154435_-	TIGR00938, homoserine_kinase_homolog, homoserine kinase, Neisseria type	NA|243aa|up_4|NC_017501.1_2154471_2155200_-	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA|414aa|up_3|NC_017501.1_2155351_2156593_+	PRK10483, PRK10483, tryptophan permease; Provisional	NA|188aa|up_2|NC_017501.1_2156725_2157289_+	PRK08942, PRK08942, D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA|248aa|up_1|NC_017501.1_2157317_2158061_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|230aa|up_0|NC_017501.1_2158057_2158747_+	COG1451, COG1451, Predicted metal-dependent hydrolase [General function prediction only]	NA|266aa|down_0|NC_017501.1_2160352_2161150_+	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA	NA|80aa|down_1|NC_017501.1_2161272_2161512_+	COG2336, MazE, Growth regulator [Signal transduction mechanisms]	NA|106aa|down_2|NC_017501.1_2161505_2161823_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|361aa|down_3|NC_017501.1_2163419_2164502_+	pfam00267, Porin_1, Gram-negative porin	NA|634aa|down_4|NC_017501.1_2165207_2167109_-	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional	NA|292aa|down_5|NC_017501.1_2167707_2168583_+	cd03676, Nudix_hydrolase_3, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|313aa|down_6|NC_017501.1_2168591_2169530_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|70aa|down_7|NC_017501.1_2169547_2169757_+	NA	NA|592aa|down_8|NC_017501.1_2170804_2172580_-	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism]	NA|90aa|down_9|NC_017501.1_2172579_2172849_-	COG1925, FruB, Phosphotransferase system, HPr-related proteins [Carbohydrate transport and metabolism]
GCF_000026965.1_ASM2696v1	NC_017501	Neisseria meningitidis 8013, complete genome	13	2260841-2260946	10	CRISPRCasFinder	no		DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	Orphan	CGAAGGCAAATGCGGCGAGGGCAAATGCGGT	31	0	0	NA	NA	NA	1	1	Orphan	DinG,csa3,c2c4_V-U1,DEDDh,WYL,cas3,cas9,cas1,cas2	NA|72aa|up_8|NC_017501.1_2244655_2244871_+,NA|147aa|down_4|NC_017501.1_2263689_2264130_+,NA|81aa|down_5|NC_017501.1_2264688_2264931_-	NA|72aa|up_9|NC_017501.1_2244447_2244663_+	pfam13783, DUF4177, Domain of unknown function (DUF4177)	NA|72aa|up_8|NC_017501.1_2244655_2244871_+	NA	NA|497aa|up_7|NC_017501.1_2244946_2246437_-	pfam01298, TbpB_B_D, C-lobe and N-lobe beta barrels of Tf-binding protein B	NA|410aa|up_6|NC_017501.1_2246548_2247778_-	PRK13628, PRK13628, serine/threonine transporter SstT; Provisional	NA|616aa|up_5|NC_017501.1_2248187_2250035_+	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|1390aa|up_4|NC_017501.1_2250089_2254259_+	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|486aa|up_3|NC_017501.1_2255330_2256788_+	TIGR00924, putative_Di/Tri_peptide_transporter, amino acid/peptide transporter (Peptide:H+ symporter), bacterial	NA|368aa|up_2|NC_017501.1_2257697_2258801_-	PRK00578, prfB, peptide chain release factor 2; Validated	NA|298aa|up_1|NC_017501.1_2258903_2259797_-	COG1752, RssA, Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]	NA|150aa|up_0|NC_017501.1_2260138_2260588_+	COG2259, COG2259, Predicted membrane protein [Function unknown]	NA|281aa|down_0|NC_017501.1_2261085_2261928_+	COG3220, COG3220, Uncharacterized protein conserved in bacteria [Function unknown]	NA|249aa|down_1|NC_017501.1_2261917_2262664_+	COG3219, COG3219, Uncharacterized protein conserved in bacteria [Function unknown]	NA|196aa|down_2|NC_017501.1_2262685_2263273_+	PRK12532, PRK12532, RNA polymerase sigma factor; Provisional	NA|60aa|down_3|NC_017501.1_2263278_2263458_+	pfam13490, zf-HC2, Putative zinc-finger	NA|147aa|down_4|NC_017501.1_2263689_2264130_+	NA	NA|81aa|down_5|NC_017501.1_2264688_2264931_-	NA	NA|203aa|down_6|NC_017501.1_2264991_2265600_+	COG3676, COG3676, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|201aa|down_7|NC_017501.1_2265670_2266273_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|424aa|down_8|NC_017501.1_2266306_2267578_-	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|106aa|down_9|NC_017501.1_2267735_2268053_+	pfam14131, DUF4298, Domain of unknown function (DUF4298)
