The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009445	Bradyrhizobium sp. ORS 278, complete genome	7456587	3783880	3825399	7456587	capsid,protease,tail,portal,terminase,integrase	Rhodobacter_phage(33.33%)	55	3779026:3779042	3813280:3813296
3779026:3779042	attL	CTTCTCGACCTGGTCGG	NA	NA	NA	NA
WP_011926516.1|3783880_3784909_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_011926517.1|3785770_3787003_+	5-aminolevulinate synthase	NA	NA	NA	NA	NA
WP_011926518.1|3787141_3787720_+	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_011926519.1|3787822_3788035_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926520.1|3788335_3789088_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011926521.1|3789294_3789627_+	Rieske 2Fe-2S domain-containing protein	NA	NA	NA	NA	NA
WP_011926522.1|3790130_3791108_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926523.1|3791178_3792255_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A291AUF0	Sinorhizobium_phage	31.5	4.0e-29
WP_011926524.1|3792251_3792524_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011926525.1|3792520_3792766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011926526.1|3792858_3793068_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157872576.1|3793070_3793289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041756610.1|3793368_3793659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011926529.1|3793799_3794459_-	S24 family peptidase	NA	NA	NA	NA	NA
WP_011926530.1|3794555_3794810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157872577.1|3794806_3795190_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926532.1|3795186_3795474_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926533.1|3795470_3795725_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926534.1|3795721_3796192_+	DUF2312 domain-containing protein	NA	NA	NA	NA	NA
WP_011926535.1|3796204_3796693_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_011926536.1|3796692_3798525_+	hypothetical protein	NA	M4SPS7	Rhodobacter_phage	33.0	5.4e-10
WP_011926537.1|3798521_3798713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_050781101.1|3798747_3799110_+	hypothetical protein	NA	A0A068CDI5	Rhizobium_phage	66.0	4.2e-31
WP_011926539.1|3799106_3799406_+	hypothetical protein	NA	C4NTA4	Sulfitobacter_phage	42.4	2.4e-08
WP_050781011.1|3799402_3799660_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926540.1|3799626_3799911_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926541.1|3799907_3800168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926542.1|3800228_3801491_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926543.1|3801487_3802093_+	transcription antitermination protein NusG	NA	NA	NA	NA	NA
WP_157872578.1|3802248_3802875_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041756616.1|3803188_3803464_+	HNH endonuclease	NA	A0A286N2R3	Klebsiella_phage	41.0	9.3e-07
WP_011926546.1|3803554_3804043_+	hypothetical protein	NA	I3ULZ5	Rhodobacter_phage	44.4	1.9e-23
WP_011926547.1|3804072_3805173_-	FRG domain-containing protein	NA	NA	NA	NA	NA
WP_011926548.1|3805282_3807022_+|terminase	terminase large subunit	terminase	I3ULZ6	Rhodobacter_phage	39.5	2.7e-107
WP_011926549.1|3807021_3808347_+|portal	phage portal protein	portal	A4JWZ9	Burkholderia_virus	32.3	5.4e-44
WP_157872579.1|3808352_3809213_+	S49 family peptidase	NA	E5AFY0	Erwinia_phage	36.4	1.5e-26
WP_157872580.1|3809312_3810047_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926551.1|3810240_3811551_+|capsid	phage major capsid protein	capsid	NA	NA	NA	NA
WP_011926552.1|3811620_3812073_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157872581.1|3812145_3813414_+	hypothetical protein	NA	NA	NA	NA	NA
3813280:3813296	attR	CTTCTCGACCTGGTCGG	NA	NA	NA	NA
WP_011926554.1|3813426_3813642_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926555.1|3813644_3814259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926556.1|3814264_3814645_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926557.1|3814648_3814951_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926558.1|3814952_3815423_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926559.1|3815434_3815881_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926560.1|3815909_3817142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926561.1|3817151_3817598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926562.1|3817660_3817933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926563.1|3817934_3820058_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926564.1|3820072_3820321_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926565.1|3820322_3820682_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011926566.1|3820678_3821182_+	DUF1833 family protein	NA	A0A1B0T6D7	Thiobacimonas_phage	36.0	1.2e-20
WP_011926567.1|3821197_3821602_+	C40 family peptidase	NA	A0A1B0T6J5	Pelagibaca_phage	38.4	5.3e-19
WP_041756622.1|3821601_3825399_+|tail	tail fiber protein	tail	M4T544	Rhodobacter_phage	29.9	1.9e-94
>prophage 2
NC_009445	Bradyrhizobium sp. ORS 278, complete genome	7456587	4227696	4237338	7456587	tRNA	uncultured_Mediterranean_phage(88.89%)	11	NA	NA
WP_011926925.1|4227696_4229148_-	LysM peptidoglycan-binding domain-containing M23 family metallopeptidase	NA	Q8SBN9	Clostridium_phage	40.9	1.2e-17
WP_011926926.1|4229255_4229903_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.1	8.5e-27
WP_011926927.1|4230189_4230573_+	response regulator	NA	NA	NA	NA	NA
WP_011926928.1|4230585_4231353_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	37.9	7.5e-38
WP_011926929.1|4231439_4231808_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011926930.1|4231909_4233238_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.8	2.9e-98
WP_011926931.1|4233368_4234184_-	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.8	5.1e-53
WP_011926932.1|4234180_4234717_-	twin-arginine translocase subunit TatB	NA	A0A1B1IVT0	uncultured_Mediterranean_phage	48.9	5.8e-05
WP_006614346.1|4234821_4235055_-	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	55.4	4.2e-08
WP_041756711.1|4235336_4236479_-	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	48.1	2.3e-43
WP_011926934.1|4236498_4237338_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	35.9	3.7e-30
>prophage 3
NC_009445	Bradyrhizobium sp. ORS 278, complete genome	7456587	4644336	4653143	7456587		Lake_Baikal_phage(16.67%)	7	NA	NA
WP_011927300.1|4644336_4645611_-	adenylate/guanylate cyclase domain-containing protein	NA	A0A2H4N7Z5	Lake_Baikal_phage	28.7	8.4e-10
WP_011927301.1|4645645_4646056_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	65.9	3.5e-42
WP_011927302.1|4646255_4647074_+	chromate resistance protein	NA	NA	NA	NA	NA
WP_011927303.1|4647070_4648462_+	chromate efflux transporter	NA	A0A219VHC2	Ochrobactrum_phage	72.7	1.5e-36
WP_011927304.1|4648471_4649446_-	cation transporter	NA	A0A1V0SED0	Indivirus	38.0	7.8e-08
WP_011927305.1|4649695_4651948_-	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	41.8	3.1e-92
WP_011927306.1|4652312_4653143_+	alpha/beta hydrolase	NA	A0A0B5A484	Mycobacterium_phage	26.5	1.5e-07
