The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009138	Herminiimonas arsenicoxydans chromosome, complete sequence	3424307	107737	117747	3424307	tRNA	Moumouvirus(16.67%)	9	NA	NA
WP_011869699.1|107737_110374_-	DNA topoisomerase III	NA	A0A2P1ELA0	Moumouvirus	25.9	2.3e-25
WP_041321930.1|110630_111107_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_011869701.1|111377_112496_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	35.8	1.9e-26
WP_011869702.1|112592_113801_-	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	56.8	2.1e-10
WP_011869703.1|113865_114396_+	peptide deformylase	NA	Q6VSW0	Vibrio_phage	37.5	4.9e-12
WP_011869704.1|114490_115444_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	34.3	2.6e-08
WP_011869705.1|115507_115921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011869706.1|115922_116390_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_041321936.1|116505_117747_+	ornithine--oxo-acid transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.4	1.4e-25
>prophage 2
NC_009138	Herminiimonas arsenicoxydans chromosome, complete sequence	3424307	1165360	1174528	3424307		Enterobacteria_phage(42.86%)	9	NA	NA
WP_011870661.1|1165360_1166371_+	polysaccharide biosynthesis protein	NA	K7Y9E1	Megavirus	36.8	1.7e-42
WP_011870662.1|1166363_1167488_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SJE0	Klosneuvirus	46.8	6.3e-102
WP_011870663.1|1167550_1168489_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_011870664.1|1168498_1169059_+	sugar transferase	NA	NA	NA	NA	NA
WP_011870665.1|1169065_1171045_+	polysaccharide biosynthesis protein	NA	A0A1V0SAI8	Catovirus	29.5	9.0e-19
WP_011870666.1|1171080_1172184_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.2	6.6e-88
WP_011870667.1|1172196_1173102_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	63.2	8.1e-100
WP_041322230.1|1173104_1173650_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	60.2	9.0e-54
WP_041322231.1|1173646_1174528_+	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	31.0	1.7e-22
>prophage 3
NC_009138	Herminiimonas arsenicoxydans chromosome, complete sequence	3424307	1266533	1279537	3424307		Bacillus_phage(37.5%)	11	NA	NA
WP_041322241.1|1266533_1269347_-	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	33.2	8.0e-21
WP_011870761.1|1269549_1270356_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_041323231.1|1270639_1270846_+	YdcH family protein	NA	NA	NA	NA	NA
WP_011870763.1|1270933_1272940_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	32.7	1.2e-87
WP_011870764.1|1273030_1273768_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	54.9	2.4e-70
WP_011870765.1|1273764_1274631_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.4	1.3e-35
WP_011870766.1|1274675_1275590_+	peptidoglycan DD-metalloendopeptidase family protein	NA	A0A1P8CWQ1	Bacillus_phage	36.4	1.1e-06
WP_011870767.1|1275589_1276624_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.1	1.4e-34
WP_011870768.1|1276755_1278141_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	24.2	3.3e-20
WP_011870769.1|1278214_1278904_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
WP_011870770.1|1279111_1279537_+	nucleoside-diphosphate kinase	NA	A0A167REB2	Powai_lake_megavirus	42.9	6.0e-21
>prophage 4
NC_009138	Herminiimonas arsenicoxydans chromosome, complete sequence	3424307	2285038	2291659	3424307	terminase	Pseudomonas_phage(33.33%)	10	NA	NA
WP_050756717.1|2285038_2286433_-|terminase	terminase	terminase	A0A0S0N2B2	Pseudomonas_phage	41.3	3.5e-102
WP_011871685.1|2286425_2286842_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041322503.1|2286992_2287244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011871687.1|2287420_2287888_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011871688.1|2287921_2288359_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011871689.1|2288565_2289321_-	hypothetical protein	NA	U6C6D0	Ralstonia_phage	39.0	1.0e-31
WP_011871690.1|2289313_2290099_-	hypothetical protein	NA	B5AX23	Iodobacteriophage	54.6	5.5e-20
WP_011871691.1|2290098_2290683_-	recombination protein NinG	NA	A0A0U1VZM0	Pseudomonas_phage	39.3	9.1e-28
WP_041322504.1|2290679_2291294_-	hypothetical protein	NA	A0A2I7S4C5	Vibrio_phage	65.7	1.3e-77
WP_011871693.1|2291290_2291659_-	recombination protein NinB	NA	F1C5C7	Cronobacter_phage	49.2	7.7e-25
>prophage 5
NC_009138	Herminiimonas arsenicoxydans chromosome, complete sequence	3424307	2297564	2303929	3424307		Salmonella_phage(33.33%)	10	NA	NA
WP_011871706.1|2297564_2298635_+	hypothetical protein	NA	B5AX96	Iodobacteriophage	62.8	6.2e-06
WP_011871707.1|2298642_2298897_+	hypothetical protein	NA	A0A2L0V172	Salmonella_phage	61.9	1.6e-16
WP_041322523.1|2298965_2299847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011871709.1|2299843_2300119_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011871710.1|2300121_2300733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011871711.1|2300729_2301056_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011871713.1|2301219_2301417_+	hypothetical protein	NA	Q774Z6	Bordetella_phage	49.2	8.3e-10
WP_011871714.1|2301392_2302556_+	DUF3596 domain-containing protein	NA	Q774Z5	Bordetella_phage	39.3	3.4e-74
WP_011871715.1|2302693_2303398_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	40.3	1.3e-41
WP_011871716.1|2303488_2303929_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	49.6	8.9e-36
>prophage 6
NC_009138	Herminiimonas arsenicoxydans chromosome, complete sequence	3424307	2608881	2618837	3424307	protease	Acinetobacter_phage(16.67%)	11	NA	NA
WP_011872017.1|2608881_2610243_+	polynucleotide adenylyltransferase PcnB	NA	A0A172Q0J1	Acinetobacter_phage	38.4	3.5e-22
WP_011872018.1|2610239_2610728_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_011872019.1|2610819_2611167_+	DMT family protein	NA	NA	NA	NA	NA
WP_011872020.1|2611230_2611872_+	deoxynucleoside kinase	NA	A0A068EPC2	Bacillus_phage	26.7	8.8e-16
WP_011872021.1|2611874_2612705_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	35.0	1.3e-40
WP_011872022.1|2612817_2613111_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011872023.1|2613173_2614034_-|protease	metalloprotease	protease	A0A1I9SA48	Rhodococcus_phage	34.5	3.1e-32
WP_011872024.1|2614085_2614775_-	carbonate dehydratase	NA	NA	NA	NA	NA
WP_011872025.1|2614875_2615463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011872026.1|2615583_2616708_-	molecular chaperone DnaJ	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	36.6	9.6e-26
WP_011872027.1|2616887_2618837_-	molecular chaperone DnaK	NA	A0A1V0SH73	Hokovirus	50.6	1.3e-147
