assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000025265.1_ASM2526v1	NC_013739	Conexibacter woesei DSM 14684, complete sequence	1	466299-466442	1	CRISPRCasFinder	no		WYL,csa3,DEDDh,DinG,cas3,cas4	Orphan	GGCTCGACGCCGTCGCCGCGCGCG	24	0	0	NA	NA	NA	2	2	Orphan	WYL,csa3,DEDDh,DinG,cas3,cas4	NA,NA|132aa|down_9|NC_013739.1_477262_477658_-	NA|547aa|up_9|NC_013739.1_451462_453103_+	cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles	NA|398aa|up_8|NC_013739.1_453099_454293_+	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|321aa|up_7|NC_013739.1_454327_455290_+	TIGR03211, catechol_2_3, catechol 2,3 dioxygenase	NA|210aa|up_6|NC_013739.1_455337_455967_-	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain	NA|964aa|up_5|NC_013739.1_456067_458959_+	COG3899, COG3899, Predicted ATPase [General function prediction only]	NA|471aa|up_4|NC_013739.1_459170_460583_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|483aa|up_3|NC_013739.1_460570_462019_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|213aa|up_2|NC_013739.1_462097_462736_+	pfam06736, DUF1211, Protein of unknown function (DUF1211)	NA|346aa|up_1|NC_013739.1_462743_463781_-	pfam13977, TetR_C_6, BetI-type transcriptional repressor, C-terminal	NA|426aa|up_0|NC_013739.1_463847_465125_+	COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]	NA|580aa|down_0|NC_013739.1_467202_468942_+	pfam02538, Hydantoinase_B, Hydantoinase B/oxoprolinase	NA|604aa|down_1|NC_013739.1_469033_470845_+	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|293aa|down_2|NC_013739.1_470841_471720_+	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|532aa|down_3|NC_013739.1_471716_473312_+	cd08512, PBP2_NikA_DppA_OppA_like_7, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|335aa|down_4|NC_013739.1_473311_474316_+	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism]	NA|195aa|down_5|NC_013739.1_474347_474932_+	cd01012, YcaC_related, YcaC related amidohydrolases; E	NA|138aa|down_6|NC_013739.1_474921_475335_-	cd18733, PIN_RfVapC1-like, VapC-like PIN domain of Rickettsia felis VapC1 and related proteins	NA|86aa|down_7|NC_013739.1_475322_475580_-	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system	NA|551aa|down_8|NC_013739.1_475613_477266_+	COG2936, COG2936, Predicted acyl esterases [General function prediction only]	NA|132aa|down_9|NC_013739.1_477262_477658_-	NA
GCF_000025265.1_ASM2526v1	NC_013739	Conexibacter woesei DSM 14684, complete sequence	2	1272898-1272992	2	CRISPRCasFinder	no		WYL,csa3,DEDDh,DinG,cas3,cas4	Orphan	CGATGCGGCTCGCTCCGGCGAAG	23	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,DinG,cas3,cas4	NA,NA|203aa|down_7|NC_013739.1_1282619_1283228_-	NA|472aa|up_9|NC_013739.1_1263708_1265124_+	PRK12663, PRK12663, Na+/H+ antiporter subunit D	NA|174aa|up_8|NC_013739.1_1265120_1265642_+	pfam01899, MNHE, Na+/H+ ion antiporter subunit	NA|90aa|up_7|NC_013739.1_1265641_1265911_+	COG2212, MnhF, Multisubunit Na+/H+ antiporter, MnhF subunit [Inorganic ion transport and metabolism]	NA|120aa|up_6|NC_013739.1_1265907_1266267_+	PRK12674, PRK12674, putative monovalent cation/H+ antiporter subunit G; Reviewed	NA|119aa|up_5|NC_013739.1_1266345_1266702_+	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|322aa|up_4|NC_013739.1_1266695_1267661_+	pfam07853, DUF1648, Protein of unknown function (DUF1648)	NA|588aa|up_3|NC_013739.1_1267657_1269421_-	PRK09776, PRK09776, putative diguanylate cyclase; Provisional	NA|105aa|up_2|NC_013739.1_1269520_1269835_-	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]	NA|206aa|up_1|NC_013739.1_1269831_1270449_-	COG0655, WrbA, Multimeric flavodoxin WrbA [General function prediction only]	NA|163aa|up_0|NC_013739.1_1270662_1271151_+	COG1846, MarR, Transcriptional regulators [Transcription]	NA|225aa|down_0|NC_013739.1_1273223_1273898_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|467aa|down_1|NC_013739.1_1273923_1275324_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|305aa|down_2|NC_013739.1_1275375_1276290_-	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|350aa|down_3|NC_013739.1_1276391_1277441_+	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1	NA|489aa|down_4|NC_013739.1_1277437_1278904_+	PRK12854, PRK12854, glucose-6-phosphate 1-dehydrogenase; Provisional	NA|227aa|down_5|NC_013739.1_1279112_1279793_+	pfam04213, HtaA, Htaa	NA|886aa|down_6|NC_013739.1_1279807_1282465_+	pfam04213, HtaA, Htaa	NA|203aa|down_7|NC_013739.1_1282619_1283228_-	NA	NA|290aa|down_8|NC_013739.1_1283519_1284389_+	pfam12833, HTH_18, Helix-turn-helix domain	NA|135aa|down_9|NC_013739.1_1284491_1284896_+	cd08355, TioX_like, Micromonospora sp
GCF_000025265.1_ASM2526v1	NC_013739	Conexibacter woesei DSM 14684, complete sequence	3	1472591-1472811	3	CRISPRCasFinder	no		WYL,csa3,DEDDh,DinG,cas3,cas4	Orphan	CCGCTGGCGGGGCTGACGAACCT	23	0	0	NA	NA	NA	3	3	Orphan	WYL,csa3,DEDDh,DinG,cas3,cas4	NA|59aa|up_5|NC_013739.1_1464491_1464668_+,NA	NA|91aa|up_9|NC_013739.1_1460916_1461189_+	pfam01381, HTH_3, Helix-turn-helix	NA|115aa|up_8|NC_013739.1_1461185_1461530_+	COG4710, COG4710, Predicted DNA-binding protein with an HTH domain [General function prediction only]	NA|643aa|up_7|NC_013739.1_1462133_1464062_+	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane]	NA|68aa|up_6|NC_013739.1_1464134_1464338_+	COG5434, PGU1, Endopygalactorunase [Cell envelope biogenesis, outer membrane]	NA|59aa|up_5|NC_013739.1_1464491_1464668_+	NA	NA|670aa|up_4|NC_013739.1_1464746_1466756_+	cd00146, PKD, polycystic kidney disease I (PKD) domain; similar to other cell-surface modules, with an IG-like fold; domain probably functions as a ligand binding site in protein-protein or protein-carbohydrate interactions; a single instance of the repeat is presented here	NA|379aa|up_3|NC_013739.1_1466971_1468108_-	cd03506, Delta6-FADS-like, The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria	NA|364aa|up_2|NC_013739.1_1468065_1469157_-	cd06216, FNR_iron_sulfur_binding_2, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|191aa|up_1|NC_013739.1_1469392_1469965_+	pfam01391, Collagen, Collagen triple helix repeat (20 copies)	NA|583aa|up_0|NC_013739.1_1470256_1472005_+	pfam00932, LTD, Lamin Tail Domain	NA|241aa|down_0|NC_013739.1_1475998_1476721_+	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|121aa|down_1|NC_013739.1_1476738_1477101_+	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|182aa|down_2|NC_013739.1_1477114_1477660_-	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|250aa|down_3|NC_013739.1_1477800_1478550_+	PRK06500, PRK06500, SDR family oxidoreductase	NA|299aa|down_4|NC_013739.1_1478501_1479398_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|238aa|down_5|NC_013739.1_1479428_1480142_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|384aa|down_6|NC_013739.1_1480138_1481290_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|232aa|down_7|NC_013739.1_1481282_1481978_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|347aa|down_8|NC_013739.1_1482064_1483105_+	cd12185, HGDH_LDH_like, Putative Lactate dehydrogenase and (R)-2-Hydroxyglutarate Dehydrogenase-like proteins, NAD-binding and catalytic domains	NA|347aa|down_9|NC_013739.1_1483097_1484138_+	PRK14568, vanB, D-alanine--D-lactate ligase; Provisional
GCF_000025265.1_ASM2526v1	NC_013739	Conexibacter woesei DSM 14684, complete sequence	4	3488865-3488965	4	CRISPRCasFinder	no		WYL,csa3,DEDDh,DinG,cas3,cas4	Orphan	GACGTCGACGGCGCCCATCACGGCGA	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,DEDDh,DinG,cas3,cas4	NA,NA|204aa|down_1|NC_013739.1_3490592_3491204_+,NA|202aa|down_2|NC_013739.1_3491235_3491841_+,NA|200aa|down_3|NC_013739.1_3491864_3492464_+,NA|671aa|down_7|NC_013739.1_3495187_3497200_+	NA|274aa|up_9|NC_013739.1_3478925_3479747_+	COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]	NA|290aa|up_8|NC_013739.1_3479759_3480629_+	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|459aa|up_7|NC_013739.1_3480628_3482005_+	COG0769, MurE, UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis, outer membrane]	NA|239aa|up_6|NC_013739.1_3482001_3482718_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|264aa|up_5|NC_013739.1_3482647_3483439_+	COG3442, COG3442, Predicted glutamine amidotransferase [General function prediction only]	NA|249aa|up_4|NC_013739.1_3483726_3484473_-	pfam02586, SRAP, SOS response associated peptidase (SRAP)	NA|204aa|up_3|NC_013739.1_3484491_3485103_-	pfam02322, Cyt_bd_oxida_II, Cytochrome bd terminal oxidase subunit II	NA|380aa|up_2|NC_013739.1_3485156_3486296_-	cd14486, 3D_domain, 3D domain, named for 3 conserved aspartate residues, is found in mltA-like lytic transglycosylases and numerous other contexts	NA|204aa|up_1|NC_013739.1_3487430_3488042_+	pfam09722, DUF2384, Protein of unknown function (DUF2384)	NA|150aa|up_0|NC_013739.1_3488111_3488561_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|369aa|down_0|NC_013739.1_3489362_3490469_+	cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases	NA|204aa|down_1|NC_013739.1_3490592_3491204_+	NA	NA|202aa|down_2|NC_013739.1_3491235_3491841_+	NA	NA|200aa|down_3|NC_013739.1_3491864_3492464_+	NA	NA|444aa|down_4|NC_013739.1_3492452_3493784_-	pfam03069, FmdA_AmdA, Acetamidase/Formamidase family	NA|83aa|down_5|NC_013739.1_3493785_3494034_-	cd00754, Ubl_MoaD, ubiquitin-like (Ubl) domain found in molybdenum cofactor biosynthesis protein D (MoaD) and similar proteins	NA|328aa|down_6|NC_013739.1_3494056_3495040_-	cd19076, AKR_AKR13A_13D, AKR13A and AKR13D families of aldo-keto reductase (AKR)	NA|671aa|down_7|NC_013739.1_3495187_3497200_+	NA	NA|417aa|down_8|NC_013739.1_3497714_3498965_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|141aa|down_9|NC_013739.1_3498948_3499371_-	pfam03330, DPBB_1, Lytic transglycolase
GCF_000025265.1_ASM2526v1	NC_013739	Conexibacter woesei DSM 14684, complete sequence	5	4880374-4881053	5	CRISPRCasFinder	no		WYL,csa3,DEDDh,DinG,cas3,cas4	Orphan	GGCGCCAAGGGCGACACCGGCGACCA	26	2	3	4880544-4880559|4880544-4880559|4880739-4880757	NC_013739.1_1446152-1446137|NC_013739.1_2410799-2410784|NC_013739.1_6249125-6249107	NA	11	11	Orphan	WYL,csa3,DEDDh,DinG,cas3,cas4	NA|387aa|up_9|NC_013739.1_4868165_4869326_-,NA|72aa|up_8|NC_013739.1_4869429_4869645_-,NA|352aa|up_0|NC_013739.1_4878618_4879674_-,NA	NA|387aa|up_9|NC_013739.1_4868165_4869326_-	NA	NA|72aa|up_8|NC_013739.1_4869429_4869645_-	NA	NA|496aa|up_7|NC_013739.1_4869714_4871202_-	PRK15313, PRK15313, intestinal colonization autotransporter adhesin MisL	NA|422aa|up_6|NC_013739.1_4872566_4873832_-	cd04733, OYE_like_2_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 2	NA|201aa|up_5|NC_013739.1_4873858_4874461_+	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family	NA|263aa|up_4|NC_013739.1_4874484_4875273_+	cd05233, SDR_c, classical (c) SDRs	NA|332aa|up_3|NC_013739.1_4875269_4876265_+	cd08241, QOR1, Quinone oxidoreductase (QOR)	NA|408aa|up_2|NC_013739.1_4876288_4877512_+	cd01155, ACAD_FadE2, Acyl-CoA dehydrogenases similar to fadE2	NA|358aa|up_1|NC_013739.1_4877508_4878582_+	cd05154, ACAD10_11_N-like, N-terminal domain of Acyl-CoA dehydrogenase (ACAD) 10 and 11, and similar proteins	NA|352aa|up_0|NC_013739.1_4878618_4879674_-	NA	NA|306aa|down_0|NC_013739.1_4882003_4882921_+	cd06160, S2P-M50_like_2, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms	NA|492aa|down_1|NC_013739.1_4883036_4884512_-	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|129aa|down_2|NC_013739.1_4884601_4884988_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|161aa|down_3|NC_013739.1_4885097_4885580_-	pfam01668, SmpB, SmpB protein	NA|562aa|down_4|NC_013739.1_4885590_4887276_-	TIGR02063, Ribonuclease_R, ribonuclease R	NA|401aa|down_5|NC_013739.1_4887392_4888595_-	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane]	NA|274aa|down_6|NC_013739.1_4888662_4889484_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|288aa|down_7|NC_013739.1_4889528_4890392_-	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning]	NA|330aa|down_8|NC_013739.1_4890418_4891408_-	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning]	NA|418aa|down_9|NC_013739.1_4891531_4892785_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]
