assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000025205.1_ASM2520v1	NC_013721	Gardnerella vaginalis 409-05, complete sequence	1	172791-172864	1	CRISPRCasFinder	no		cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,WYL	Orphan	TTTTGCCAAAATGTCGGTATAGA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,WYL	NA|79aa|up_2|NC_013721.1_171302_171539_-,NA	NA|78aa|up_9|NC_013721.1_165035_165269_+	cd18121, ATP-synt_Fo_c, membrane-bound Fo complex of F-ATP synthase, subunit c	NA|181aa|up_8|NC_013721.1_165329_165872_+	PRK05759, PRK05759, F0F1 ATP synthase subunit B; Validated	NA|194aa|up_7|NC_013721.1_165971_166553_+	PRK13430, PRK13430, F0F1 ATP synthase subunit delta; Provisional	NA|554aa|up_6|NC_013721.1_166569_168231_+	PRK09281, PRK09281, F0F1 ATP synthase subunit alpha; Validated	NA|335aa|up_5|NC_013721.1_168234_169239_+	PRK05621, PRK05621, F0F1 ATP synthase subunit gamma; Validated	NA|496aa|up_4|NC_013721.1_169245_170733_+	PRK09280, PRK09280, F0F1 ATP synthase subunit beta; Validated	NA|105aa|up_3|NC_013721.1_170735_171050_+	PRK13442, atpC, F0F1 ATP synthase subunit epsilon; Provisional	NA|79aa|up_2|NC_013721.1_171302_171539_-	NA	NA|62aa|up_1|NC_013721.1_171789_171975_+	cd11586, VbhA_like, VbhA antitoxin and related proteins	NA|240aa|up_0|NC_013721.1_171993_172713_+	COG2184, Fic, Protein involved in cell division [Cell division and chromosome partitioning]	NA|417aa|down_0|NC_013721.1_173007_174258_+	COG3177, COG3177, Fic family protein [Function unknown]	NA|350aa|down_1|NC_013721.1_174288_175338_+	COG1477, ApbE, Membrane-associated lipoprotein involved in thiamine biosynthesis [Coenzyme metabolism]	NA|470aa|down_2|NC_013721.1_175666_177076_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|234aa|down_3|NC_013721.1_177082_177784_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|255aa|down_4|NC_013721.1_177923_178688_+	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|242aa|down_5|NC_013721.1_178684_179410_+	COG4200, COG4200, Uncharacterized protein conserved in bacteria [Function unknown]	NA|255aa|down_6|NC_013721.1_179423_180188_+	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein	NA|150aa|down_7|NC_013721.1_180447_180897_+	pfam12008, EcoR124_C, Type I restriction and modification enzyme - subunit R C terminal	NA|573aa|down_8|NC_013721.1_181138_182857_+	COG0672, FTR1, High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]	NA|215aa|down_9|NC_013721.1_182952_183597_+	pfam10634, Iron_transport, Fe2+ transport protein
GCF_000025205.1_ASM2520v1	NC_013721	Gardnerella vaginalis 409-05, complete sequence	2	870159-870613	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,DEDDh	cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,WYL	Type I-E	GTCTTTCCCGCATACGCGGGGGTGATCC,GTCTTTCCCGCATACGCGGGGGTGATCC,GTCTTTCCCGCATACGCGGGGGTGATCC	28,28,28	4	4	870248-870280|870309-870341|870370-870402|870431-870463	NC_013721.1_1126565-1126533|NC_013721.1_1129274-1129306|NC_013721.1_1128787-1128755|NC_013721.1_1129455-1129423	I-C,I-E,II-B:I-C,I-E,II-B:I-C,I-E,II-B	6,7,7	7	TypeI-E	cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,WYL	NA,NA	NA|466aa|up_9|NC_013721.1_853930_855328_-	pfam18862, ApeA_NTD1, ApeA N-terminal domain 1	NA|394aa|up_8|NC_013721.1_857159_858341_+	pfam10551, MULE, MULE transposase domain	cas3|949aa|up_7|NC_013721.1_860090_862937_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|557aa|up_6|NC_013721.1_862933_864604_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|205aa|up_5|NC_013721.1_864625_865240_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|363aa|up_4|NC_013721.1_865327_866416_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|292aa|up_3|NC_013721.1_866474_867350_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|216aa|up_2|NC_013721.1_867350_867998_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|314aa|up_1|NC_013721.1_868033_868975_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	DEDDh|360aa|up_0|NC_013721.1_868976_870056_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|414aa|down_0|NC_013721.1_871920_873162_+	TIGR03176, AllC, allantoate amidohydrolase	NA|495aa|down_1|NC_013721.1_873471_874956_+	PRK11375, PRK11375, putative allantoin permease	NA|459aa|down_2|NC_013721.1_874957_876334_+	PRK08044, PRK08044, allantoinase AllB	NA|66aa|down_3|NC_013721.1_876394_876592_+	cd00565, Ubl_ThiS, ubiquitin-like (Ubl) domain found in sulfur carrier protein ThiS	NA|208aa|down_4|NC_013721.1_876592_877216_+	PRK08644, PRK08644, sulfur carrier protein ThiS adenylyltransferase ThiF	NA|256aa|down_5|NC_013721.1_877205_877973_+	PRK00208, thiG, thiazole synthase; Reviewed	NA|1148aa|down_6|NC_013721.1_878393_881837_+	sd00006, TPR, Tetratricopeptide repeat	NA|963aa|down_7|NC_013721.1_881970_884859_+	PRK07956, ligA, NAD-dependent DNA ligase LigA; Validated	NA|376aa|down_8|NC_013721.1_884862_885990_+	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase	NA|457aa|down_9|NC_013721.1_886083_887454_-	pfam03993, DUF349, Domain of Unknown Function (DUF349)
GCF_000025205.1_ASM2520v1	NC_013721	Gardnerella vaginalis 409-05, complete sequence	3	1135304-1135391	3	CRISPRCasFinder	no		cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,WYL	Orphan	CGCACGATTAACTCACGATTAAT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,WYL	NA|167aa|up_9|NC_013721.1_1123994_1124495_+,NA|79aa|up_8|NC_013721.1_1124623_1124860_+,NA|250aa|up_6|NC_013721.1_1128385_1129135_+,NA|67aa|up_3|NC_013721.1_1131885_1132086_+,NA|49aa|up_2|NC_013721.1_1132075_1132222_+,NA|231aa|up_0|NC_013721.1_1134194_1134887_+,NA|359aa|down_2|NC_013721.1_1137465_1138542_-	NA|167aa|up_9|NC_013721.1_1123994_1124495_+	NA	NA|79aa|up_8|NC_013721.1_1124623_1124860_+	NA	NA|1174aa|up_7|NC_013721.1_1124860_1128382_+	TIGR01760, COG5283:_Phage-related_tail_protein, phage tail tape measure protein, TP901 family, core region	NA|250aa|up_6|NC_013721.1_1128385_1129135_+	NA	NA|238aa|up_5|NC_013721.1_1129138_1129852_+	pfam06605, Prophage_tail, Prophage endopeptidase tail	NA|675aa|up_4|NC_013721.1_1129848_1131873_+	pfam05672, MAP7, MAP7 (E-MAP-115) family	NA|67aa|up_3|NC_013721.1_1131885_1132086_+	NA	NA|49aa|up_2|NC_013721.1_1132075_1132222_+	NA	NA|657aa|up_1|NC_013721.1_1132214_1134185_+	PTZ00121, PTZ00121, MAEBL; Provisional	NA|231aa|up_0|NC_013721.1_1134194_1134887_+	NA	NA|332aa|down_0|NC_013721.1_1135476_1136472_+	cd06417, GH25_LysA-like, LysA is a cell wall endolysin produced by Lactobacillus fermentum, which degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues	NA|159aa|down_1|NC_013721.1_1136491_1136968_+	pfam05105, Phage_holin_4_1, Bacteriophage holin family	NA|359aa|down_2|NC_013721.1_1137465_1138542_-	NA	NA|336aa|down_3|NC_013721.1_1138732_1139740_-	COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]	NA|135aa|down_4|NC_013721.1_1140085_1140490_+	pfam01243, Putative_PNPOx, Pyridoxamine 5'-phosphate oxidase	NA|150aa|down_5|NC_013721.1_1140804_1141254_-	pfam11457, DUF3021, Protein of unknown function (DUF3021)	NA|170aa|down_6|NC_013721.1_1141365_1141875_-	pfam04397, LytTR, LytTr DNA-binding domain	NA|273aa|down_7|NC_013721.1_1142013_1142832_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|141aa|down_8|NC_013721.1_1142856_1143279_-	pfam02410, RsfS, Ribosomal silencing factor during starvation	NA|470aa|down_9|NC_013721.1_1143315_1144725_-	PRK14352, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
