bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	2.1|401167|32|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	93.750	32	2	0	1	32	252277	252246	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	2.32e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	252246-252277	GGGGCCCCAGCAAAGAGAATTTCGAGAAGAAA	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	2.1|401167|32|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	93.750	32	2	0	1	32	252334	252303	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	2.32e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	252303-252334	GGGGCCCCAGCAAAGAGAATTTCGAGAAGAAA	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	2.1|401167|32|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	93.750	32	2	0	1	32	473008	472977	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	2.32e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	472977-473008	GGGGCCCCAACAAAGAGAATTTCGACAAGAAA	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	2.1|401167|32|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	93.750	32	2	0	1	32	1553664	1553695	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	2.32e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	1553664-1553695	TTTCTTCTCGAAATTCTCTCTGTTGGGGCCCC	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	2.1|401167|32|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	93.750	32	2	0	1	32	2492223	2492192	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	2.32e-07	46.0	1.0	TTTCTGCTCGAAATTCTCTTTGTTGGGGCCCC	2492192-2492223	GGGGCCCCAACAGAGAGAATTTCGAGAAGAAA	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	4.1|702599|17|NC_013893|PILER-CR	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	94.118	17	1	0	1	17	984178	984194	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	0.25	25.4	1.0	TTGGTGAATTTCTTATC	984178-984194	TTGGTGAATTTCTTTTC	1
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	4.1|702599|17|NC_013893|PILER-CR	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	94.118	17	1	0	1	17	2526642	2526658	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	0.25	25.4	1.0	TTGGTGAATTTCTTATC	2526642-2526658	TTGGTGAATTTCTTTTC	1
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	4.1|702599|17|NC_013893|PILER-CR	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	94.118	17	1	0	1	17	2526699	2526715	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	0.25	25.4	1.0	TTGGTGAATTTCTTATC	2526699-2526715	TTGGTGAATTTCTTTTC	1
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	4.1|702599|17|NC_013893|PILER-CR	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	94.118	17	1	0	1	17	2214913	2214897	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	0.25	25.4	1.0	TTGGTGAATTTCTTATC	2214897-2214913	GACAAGAAATTCACCAA	1
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	5.1|755295|27|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	100.000	27	0	0	1	27	177371	177397	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	4.65e-07	44.4	1.0	AATGCAACAAGCATTTCCACGAACAAC	177371-177397	AATGCAACAAGCATTTCCACGAACAAC	0
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	5.1|755295|27|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	96.296	27	1	0	1	27	798116	798142	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	4.18e-06	41.2	1.0	AATGCAACAAGCATTTCCACGAACAAC	798116-798142	AATGCAACAAGCATTTCCACGGACAAC	1
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	6.1|791244|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	97.059	34	1	0	1	34	2161047	2161080	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	3.83e-09	52.3	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	2161047-2161080	GGCCCCAACAGAGAGAAATACGAAAAGTATTTCG	1
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	6.1|791244|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	94.118	34	2	0	1	34	9104	9071	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	3.44e-08	49.1	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	9071-9104	CGAAATGCTTTTCGCATTTCTCTTTGTTGGGGCC	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	6.1|791244|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	94.118	34	2	0	1	34	1072455	1072422	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	3.44e-08	49.1	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	1072422-1072455	CGAAATGCTTTTCGAATTTCTCTTTGTTGGGGCC	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	6.1|791244|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	94.118	34	2	0	1	34	1233598	1233631	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	3.44e-08	49.1	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	1233598-1233631	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	6.1|791244|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	94.118	34	2	0	1	34	1828714	1828747	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	3.44e-08	49.1	1.0	GGCCCCAACAGAGAGAAATACGAAAAGCATTTCG	1828714-1828747	GGCCTCAACAGAGAGAAATACGAAAAGTATTTCG	2
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	10.1|2184267|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	100.000	34	0	0	1	34	9104	9071	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	4.25e-10	55.5	1.0	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	9071-9104	CGAAATGCTTTTCGCATTTCTCTTTGTTGGGGCC	0
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	10.1|2184267|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	100.000	34	0	0	1	34	1233598	1233631	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	4.25e-10	55.5	1.0	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	1233598-1233631	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	0
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	10.1|2184267|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	97.059	34	1	0	1	34	1053967	1054000	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	3.83e-09	52.3	1.0	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	1053967-1054000	GGCCCCAACAAAAAGAAATGCGAAAAGCATTTCG	1
NC_013893	Staphylococcus lugdunensis HKU09-01, complete sequence	10.1|2184267|34|NC_013893|CRISPRCasFinder	NC_013893.1	Staphylococcus lugdunensis HKU09-01, complete sequence	97.059	34	1	0	1	34	1072455	1072422	29464-29929|401141-401224|582073-582154|702542-702690|755265-755351|791221-791300|1277420-1277510|1847877-1847963|1940676-1940770|2184244-2184323|2323479-2323569	3.83e-09	52.3	1.0	GGCCCCAACAAAGAGAAATGCGAAAAGCATTTCG	1072422-1072455	CGAAATGCTTTTCGAATTTCTCTTTGTTGGGGCC	1
