assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000024785.1_ASM2478v1	NC_013441	Gordonia bronchialis DSM 43247, complete sequence	1	479032-479127	1	CRISPRCasFinder	no		csa3,WYL,cas3,DinG,DEDDh,cas4	Orphan	AAAGTAGGGGAAGGAAATCCTTCCCC	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas3,DinG,DEDDh,cas4	NA|215aa|up_6|NC_013441.1_469717_470362_+,NA|69aa|up_4|NC_013441.1_471048_471255_-,NA|281aa|up_2|NC_013441.1_472760_473603_-,NA|817aa|up_1|NC_013441.1_473639_476090_-,NA|105aa|down_5|NC_013441.1_484079_484394_+	NA|361aa|up_9|NC_013441.1_465197_466280_+	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2	NA|315aa|up_8|NC_013441.1_466289_467234_-	TIGR00367, Uncharacterized_membrane_protein_MJ0091, K+-dependent Na+/Ca+ exchanger related-protein	NA|368aa|up_7|NC_013441.1_467306_468410_+	pfam04213, HtaA, Htaa	NA|215aa|up_6|NC_013441.1_469717_470362_+	NA	NA|128aa|up_5|NC_013441.1_470668_471052_-	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only]	NA|69aa|up_4|NC_013441.1_471048_471255_-	NA	NA|424aa|up_3|NC_013441.1_471486_472758_+	pfam12897, Aminotran_MocR, Alanine-glyoxylate amino-transferase	NA|281aa|up_2|NC_013441.1_472760_473603_-	NA	NA|817aa|up_1|NC_013441.1_473639_476090_-	NA	NA|775aa|up_0|NC_013441.1_476695_479020_+	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|441aa|down_0|NC_013441.1_479155_480478_-	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|461aa|down_1|NC_013441.1_480474_481857_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|147aa|down_2|NC_013441.1_481936_482377_+	pfam10604, Polyketide_cyc2, Polyketide cyclase / dehydrase and lipid transport	NA|318aa|down_3|NC_013441.1_482387_483341_+	cd02558, PSRA_1, Pseudouridine synthase, a subgroup of the RluA family	NA|212aa|down_4|NC_013441.1_483416_484052_+	cd07251, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family	NA|105aa|down_5|NC_013441.1_484079_484394_+	NA	NA|215aa|down_6|NC_013441.1_484455_485100_+	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|110aa|down_7|NC_013441.1_485202_485532_+	pfam15588, Imm10, Immunity protein 10	NA|123aa|down_8|NC_013441.1_485552_485921_+	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein	NA|204aa|down_9|NC_013441.1_485946_486558_+	PRK00076, recR, recombination protein RecR; Reviewed
GCF_000024785.1_ASM2478v1	NC_013441	Gordonia bronchialis DSM 43247, complete sequence	2	598058-598467	2	CRISPRCasFinder	no		csa3,WYL,cas3,DinG,DEDDh,cas4	Orphan	ACACTGTTGGCTACGTTCGCCTCT	24	0	0	NA	NA	NA	6	6	Orphan	csa3,WYL,cas3,DinG,DEDDh,cas4	NA|56aa|up_9|NC_013441.1_590739_590907_-,NA|93aa|up_8|NC_013441.1_591014_591293_+,NA|71aa|up_3|NC_013441.1_594609_594822_-,NA|160aa|up_2|NC_013441.1_594830_595310_-,NA|562aa|up_1|NC_013441.1_595281_596967_-,NA|166aa|up_0|NC_013441.1_596966_597464_-,NA|115aa|down_5|NC_013441.1_605038_605383_+,NA|186aa|down_7|NC_013441.1_605760_606318_-	NA|56aa|up_9|NC_013441.1_590739_590907_-	NA	NA|93aa|up_8|NC_013441.1_591014_591293_+	NA	NA|151aa|up_7|NC_013441.1_591299_591752_+	cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion	NA|421aa|up_6|NC_013441.1_591764_593027_-	pfam01610, DDE_Tnp_ISL3, Transposase	NA|303aa|up_5|NC_013441.1_593158_594067_+	pfam12696, TraG-D_C, TraM recognition site of TraD and TraG	NA|151aa|up_4|NC_013441.1_594125_594578_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|71aa|up_3|NC_013441.1_594609_594822_-	NA	NA|160aa|up_2|NC_013441.1_594830_595310_-	NA	NA|562aa|up_1|NC_013441.1_595281_596967_-	NA	NA|166aa|up_0|NC_013441.1_596966_597464_-	NA	NA|77aa|down_0|NC_013441.1_598616_598847_-	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile	NA|747aa|down_1|NC_013441.1_598848_601089_-	COG3378, COG3378, Phage associated DNA primase [General function prediction only]	NA|67aa|down_2|NC_013441.1_601167_601368_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|132aa|down_3|NC_013441.1_601561_601957_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|578aa|down_4|NC_013441.1_603081_604815_-	smart00857, Resolvase, Resolvase, N terminal domain	NA|115aa|down_5|NC_013441.1_605038_605383_+	NA	NA|124aa|down_6|NC_013441.1_605379_605751_+	TIGR03816, tadE_like_DECH, helicase/secretion neighborhood TadE-like protein	NA|186aa|down_7|NC_013441.1_605760_606318_-	NA	NA|776aa|down_8|NC_013441.1_606310_608638_-	TIGR03817, DECH_helic, helicase/secretion neighborhood putative DEAH-box helicase	NA|68aa|down_9|NC_013441.1_608978_609182_+	COG1278, CspC, Cold shock proteins [Transcription]
GCF_000024785.1_ASM2478v1	NC_013441	Gordonia bronchialis DSM 43247, complete sequence	3	4400637-4400772	3	CRISPRCasFinder	no		csa3,WYL,cas3,DinG,DEDDh,cas4	Orphan	CCACCCGCTGGTTGAGCCGCGAC	23	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,cas3,DinG,DEDDh,cas4	NA|33aa|up_4|NC_013441.1_4397795_4397894_-,NA|54aa|down_4|NC_013441.1_4408871_4409033_-	NA|232aa|up_9|NC_013441.1_4389911_4390607_-	PRK10529, PRK10529, DNA-binding transcriptional activator KdpE; Provisional	NA|846aa|up_8|NC_013441.1_4390606_4393144_-	COG2205, KdpD, Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]	NA|211aa|up_7|NC_013441.1_4393180_4393813_-	pfam02669, KdpC, K+-transporting ATPase, c chain	NA|720aa|up_6|NC_013441.1_4393820_4395980_-	PRK01122, PRK01122, potassium-transporting ATPase subunit KdpB	NA|605aa|up_5|NC_013441.1_4395976_4397791_-	PRK05482, PRK05482, potassium-transporting ATPase subunit A; Provisional	NA|33aa|up_4|NC_013441.1_4397795_4397894_-	NA	NA|140aa|up_3|NC_013441.1_4398311_4398731_-	TIGR03666, Rv2061_F420, PPOX class probable F420-dependent enzyme, Rv2061 family	NA|250aa|up_2|NC_013441.1_4398727_4399477_-	COG3473, COG3473, Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]	NA|136aa|up_1|NC_013441.1_4399543_4399951_-	TIGR02246, hypothetical_protein, conserved hypothetical protein	NA|197aa|up_0|NC_013441.1_4399985_4400576_-	pfam03352, Adenine_glyco, Methyladenine glycosylase	NA|277aa|down_0|NC_013441.1_4400987_4401818_-	cd01107, HTH_BmrR, Helix-Turn-Helix DNA binding domain of the BmrR transcription regulator	NA|228aa|down_1|NC_013441.1_4401926_4402610_+	PRK09646, PRK09646, ECF RNA polymerase sigma factor SigK	NA|546aa|down_2|NC_013441.1_4402653_4404291_+	PRK14479, PRK14479, dihydroxyacetone kinase; Provisional	NA|851aa|down_3|NC_013441.1_4404876_4407429_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|54aa|down_4|NC_013441.1_4408871_4409033_-	NA	NA|242aa|down_5|NC_013441.1_4409140_4409866_+	cd03022, DsbA_HCCA_Iso, DsbA family, 2-hydroxychromene-2-carboxylate (HCCA) isomerase subfamily; HCCA isomerase is a glutathione (GSH) dependent enzyme involved in the naphthalene catabolic pathway	NA|173aa|down_6|NC_013441.1_4412065_4412584_-	cd02225, cupin_PA3510-like, Pseudomonas aeruginosa PA3510 and related proteins, cupin domain	NA|123aa|down_7|NC_013441.1_4412627_4412996_-	cd00448, YjgF_YER057c_UK114_family, YjgF, YER057c, and UK114 belong to a large family of proteins present in bacteria, archaea, and eukaryotes with no definitive function	NA|517aa|down_8|NC_013441.1_4413034_4414585_-	cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like	NA|180aa|down_9|NC_013441.1_4414809_4415349_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein
