assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	1	839736-839844	1	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Orphan	CAAGGACGGCTCGACCAAGCTGGTC	25	1	1	839803-839819	NC_013235.1_4520603-4520619	NA	2	2	Orphan	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA,NA	NA|165aa|up_9|NC_013235.1_826779_827274_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|267aa|up_8|NC_013235.1_827390_828191_+	cd07363, 45_DOPA_Dioxygenase, The Class III extradiol dioxygenase, 4,5-DOPA Dioxygenase, catalyzes the incorporation of both atoms of molecular oxygen into 4,5-dihydroxy-phenylalanine	NA|362aa|up_7|NC_013235.1_828248_829334_+	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD	NA|513aa|up_6|NC_013235.1_829403_830942_-	cd03876, M28_SGAP_like, M28 Zn-peptidase Streptomyces griseus aminopeptidase and similar proteins	NA|126aa|up_5|NC_013235.1_831301_831679_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|492aa|up_4|NC_013235.1_831689_833165_-	cd09603, M1_APN_like, Peptidase M1 family similar to aminopeptidase N catalytic domain	NA|404aa|up_3|NC_013235.1_833536_834748_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|719aa|up_2|NC_013235.1_834744_836901_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|365aa|up_1|NC_013235.1_837135_838230_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|263aa|up_0|NC_013235.1_838309_839098_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|179aa|down_0|NC_013235.1_841395_841932_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|642aa|down_1|NC_013235.1_841931_843857_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|302aa|down_2|NC_013235.1_844104_845010_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|211aa|down_3|NC_013235.1_845103_845736_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|442aa|down_4|NC_013235.1_845768_847094_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|407aa|down_5|NC_013235.1_847108_848329_-	cd17814, Fe-ADH-like, iron-containing alcohol dehydrogenases (Fe-ADH)-like	NA|233aa|down_6|NC_013235.1_848634_849333_-	TIGR03964, uncharacterized_protein_putative_amidase, mycofactocin system creatininase family protein	NA|506aa|down_7|NC_013235.1_849329_850847_-	TIGR03965, glycosyltransferase_Rv0696_family, mycofactocin system glycosyltransferase	NA|273aa|down_8|NC_013235.1_850843_851662_-	TIGR04504, SDR_subfam_2, SDR family mycofactocin-dependent oxidoreductase	NA|241aa|down_9|NC_013235.1_851658_852381_-	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	2	919545-920048	1	CRT	no		WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Orphan	GTCGNNGNGCCGGTGGNC	18	0	0	NA	NA	NA	9	9	Orphan	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|265aa|up_5|NC_013235.1_914203_914998_+,NA|97aa|up_3|NC_013235.1_916187_916478_+,NA	NA|361aa|up_9|NC_013235.1_910690_911773_+	cd04865, LigD_Pol_like_2, LigD_Pol_like_2: Polymerase (Pol) domain of bacterial LigD proteins similar to Pseudomonas aeruginosa (Pae) LigD, subgroup 2	NA|288aa|up_8|NC_013235.1_911926_912790_-	pfam06724, DUF1206, Domain of Unknown Function (DUF1206)	NA|205aa|up_7|NC_013235.1_912910_913525_+	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083	NA|199aa|up_6|NC_013235.1_913524_914121_+	TIGR03086, TIGR03086, TIGR03086 family protein	NA|265aa|up_5|NC_013235.1_914203_914998_+	NA	NA|355aa|up_4|NC_013235.1_915011_916076_-	PRK08224, ligC, ATP-dependent DNA ligase; Reviewed	NA|97aa|up_3|NC_013235.1_916187_916478_+	NA	NA|173aa|up_2|NC_013235.1_916490_917009_-	pfam13539, Peptidase_M15_4, D-alanyl-D-alanine carboxypeptidase	NA|168aa|up_1|NC_013235.1_917365_917869_-	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase	NA|292aa|up_0|NC_013235.1_918347_919223_+	COG2872, COG2872, Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain [General function prediction only]	NA|526aa|down_0|NC_013235.1_920799_922377_+	PHA03307, PHA03307, transcriptional regulator ICP4; Provisional	NA|136aa|down_1|NC_013235.1_922458_922866_-	PRK12928, PRK12928, lipoyl synthase; Provisional	NA|391aa|down_2|NC_013235.1_922991_924164_-	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19)	NA|401aa|down_3|NC_013235.1_924160_925363_-	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC	NA|454aa|down_4|NC_013235.1_925439_926801_+	pfam04286, DUF445, Protein of unknown function (DUF445)	NA|123aa|down_5|NC_013235.1_926830_927199_+	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|337aa|down_6|NC_013235.1_927278_928289_+	TIGR03448, mycothiol_MshD, mycothiol synthase	NA|212aa|down_7|NC_013235.1_928339_928975_+	PRK06696, PRK06696, uridine kinase; Validated	NA|163aa|down_8|NC_013235.1_929105_929594_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|395aa|down_9|NC_013235.1_929580_930765_+	PRK14900, valS, valyl-tRNA synthetase; Provisional
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	3	1333814-1336110	1,2,2,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas10,csm3gr7,csx10gr5,csx24,cas6	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Type III-C,Type III-A,Type III-B,Type III-D	GTTGCATTCCACGTCACGCCGTTGGGCGTATAGAAAC,GTTGCATTCCACGTCACGCCGTTGGGCGTATAGAAAC,GTTGCATTCCACGTCACGCCGTTGGGCGTATAGAAAC,GTTGCATTCCACGTCACGCCGTTGGGCGTATAGAA	37,37,37,35	0	0	NA	NA	NA:NA:NA:NA	27,31,31,27	31	TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|148aa|up_8|NC_013235.1_1324810_1325254_+,NA|140aa|up_7|NC_013235.1_1325349_1325769_+,NA|152aa|down_2|NC_013235.1_1340190_1340646_+,NA|37aa|down_5|NC_013235.1_1343845_1343956_-	NA|355aa|up_9|NC_013235.1_1323603_1324668_+	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|148aa|up_8|NC_013235.1_1324810_1325254_+	NA	NA|140aa|up_7|NC_013235.1_1325349_1325769_+	NA	NA|100aa|up_6|NC_013235.1_1325974_1326274_+	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|544aa|up_5|NC_013235.1_1326456_1328088_+	PRK12849, groEL, chaperonin GroEL; Reviewed	NA|95aa|up_4|NC_013235.1_1328393_1328678_-	pfam02467, Whib, Transcription factor WhiB	NA|199aa|up_3|NC_013235.1_1329265_1329862_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|203aa|up_2|NC_013235.1_1330058_1330667_+	PRK09648, PRK09648, RNA polymerase sigma factor ShbA	NA|410aa|up_1|NC_013235.1_1330714_1331944_+	PRK07003, PRK07003, DNA polymerase III subunit gamma/tau	NA|503aa|up_0|NC_013235.1_1332099_1333608_+	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|394aa|down_0|NC_013235.1_1336863_1338045_+	cd01186, INT_tnpA_C_Tn554, Putative Transposase A from transposon Tn554, C-terminal catalytic domain	NA|720aa|down_1|NC_013235.1_1338034_1340194_+	cd01187, INT_tnpB_C_Tn554, Putative Transposase B from transposon Tn554, C-terminal catalytic domain	NA|152aa|down_2|NC_013235.1_1340190_1340646_+	NA	NA|143aa|down_3|NC_013235.1_1340640_1341069_-	PRK06526, PRK06526, transposase; Provisional	NA|421aa|down_4|NC_013235.1_1342534_1343796_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|37aa|down_5|NC_013235.1_1343845_1343956_-	NA	NA|518aa|down_6|NC_013235.1_1344105_1345659_+	pfam13751, DDE_Tnp_1_6, Transposase DDE domain	NA|421aa|down_7|NC_013235.1_1345768_1347030_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas10|506aa|down_8|NC_013235.1_1347639_1349157_+	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	csm3gr7|184aa|down_9|NC_013235.1_1349153_1349705_+	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	4	1364626-1365761	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no	cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Type III-C,Type III-A,Type III-B,Type III-D	GTCAGAAACCACGTCACGCCGTCAGGCGTATAGAAAC,GTCAGAAACCACGTCACGCCGTCAGGCGTATAGAAAC,GTCAGAAACCACGTCACGCCGTCAGGCGTATAGAAAC	37,37,37	0	0	NA	NA	NA:NA:NA	14,14,15	15	TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|53aa|up_1|NC_013235.1_1363984_1364143_+,NA|74aa|down_7|NC_013235.1_1376157_1376379_-	NA|125aa|up_9|NC_013235.1_1355211_1355586_+	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|416aa|up_8|NC_013235.1_1355629_1356877_-	pfam00872, Transposase_mut, Transposase, Mutator family	RT|312aa|up_7|NC_013235.1_1356929_1357865_+	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons	NA|292aa|up_6|NC_013235.1_1357854_1358730_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|335aa|up_5|NC_013235.1_1358928_1359933_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|618aa|up_4|NC_013235.1_1359929_1361783_+	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	cas1|183aa|up_3|NC_013235.1_1362159_1362708_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|397aa|up_2|NC_013235.1_1362746_1363936_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|53aa|up_1|NC_013235.1_1363984_1364143_+	NA	cas2|95aa|up_0|NC_013235.1_1364133_1364418_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|435aa|down_0|NC_013235.1_1365871_1367176_+	pfam01610, DDE_Tnp_ISL3, Transposase	csm3gr7|720aa|down_1|NC_013235.1_1368279_1370439_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	NA|369aa|down_2|NC_013235.1_1370697_1371804_+	PRK08649, PRK08649, GuaB3 family IMP dehydrogenase-related protein	NA|346aa|down_3|NC_013235.1_1371834_1372872_-	cd12822, TmCorA-like, Thermotoga maritima CorA-like family	NA|94aa|down_4|NC_013235.1_1372901_1373183_+	pfam13223, DUF4031, Protein of unknown function (DUF4031)	NA|524aa|down_5|NC_013235.1_1373282_1374854_+	PRK00074, guaA, GMP synthase; Reviewed	NA|411aa|down_6|NC_013235.1_1374864_1376097_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|74aa|down_7|NC_013235.1_1376157_1376379_-	NA	NA|465aa|down_8|NC_013235.1_1376371_1377766_-	pfam04024, PspC, PspC domain	NA|518aa|down_9|NC_013235.1_1377888_1379442_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	5	1367179-1367813	4,4,4	CRISPRCasFinder,CRT,PILER-CR	no	cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Type III-C,Type III-A,Type III-B,Type III-D	GTCAGAAACCACGTCACGCCGTCAGGCGTATAGAAAC,GTCAGAAACCACGTCACGCCGTCAGGCGTATAGAAAC,GTCAGAAACCACGTCACGCCGTCAGGCGTATAGAAAC	37,37,37	0	0	NA	NA	NA:NA:NA	8,8,7	8	TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|53aa|up_2|NC_013235.1_1363984_1364143_+,NA|74aa|down_6|NC_013235.1_1376157_1376379_-	NA|416aa|up_9|NC_013235.1_1355629_1356877_-	pfam00872, Transposase_mut, Transposase, Mutator family	RT|312aa|up_8|NC_013235.1_1356929_1357865_+	cd01646, RT_Bac_retron_I, RT_Bac_retron_I: Reverse transcriptases (RTs) in bacterial retrotransposons or retrons	NA|292aa|up_7|NC_013235.1_1357854_1358730_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|335aa|up_6|NC_013235.1_1358928_1359933_+	PRK00236, xerC, site-specific tyrosine recombinase XerC; Reviewed	NA|618aa|up_5|NC_013235.1_1359929_1361783_+	TIGR02224, Tyrosine_recombinase_XerC, tyrosine recombinase XerC	cas1|183aa|up_4|NC_013235.1_1362159_1362708_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|397aa|up_3|NC_013235.1_1362746_1363936_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|53aa|up_2|NC_013235.1_1363984_1364143_+	NA	cas2|95aa|up_1|NC_013235.1_1364133_1364418_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|435aa|up_0|NC_013235.1_1365871_1367176_+	pfam01610, DDE_Tnp_ISL3, Transposase	csm3gr7|720aa|down_0|NC_013235.1_1368279_1370439_+	TIGR03986, CRISPR-associated_protein, CRISPR-associated protein	NA|369aa|down_1|NC_013235.1_1370697_1371804_+	PRK08649, PRK08649, GuaB3 family IMP dehydrogenase-related protein	NA|346aa|down_2|NC_013235.1_1371834_1372872_-	cd12822, TmCorA-like, Thermotoga maritima CorA-like family	NA|94aa|down_3|NC_013235.1_1372901_1373183_+	pfam13223, DUF4031, Protein of unknown function (DUF4031)	NA|524aa|down_4|NC_013235.1_1373282_1374854_+	PRK00074, guaA, GMP synthase; Reviewed	NA|411aa|down_5|NC_013235.1_1374864_1376097_+	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily	NA|74aa|down_6|NC_013235.1_1376157_1376379_-	NA	NA|465aa|down_7|NC_013235.1_1376371_1377766_-	pfam04024, PspC, PspC domain	NA|518aa|down_8|NC_013235.1_1377888_1379442_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|220aa|down_9|NC_013235.1_1379438_1380098_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	6	1406757-1406860	5	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Orphan	TTTCCTGGGCCTGGCCGCGGCTTTGATCAG	30	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|220aa|up_8|NC_013235.1_1398795_1399455_+,NA|212aa|up_5|NC_013235.1_1401288_1401924_+,NA|198aa|down_0|NC_013235.1_1407967_1408561_+,NA|66aa|down_3|NC_013235.1_1410969_1411167_-	NA|207aa|up_9|NC_013235.1_1397989_1398610_+	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|220aa|up_8|NC_013235.1_1398795_1399455_+	NA	NA|365aa|up_7|NC_013235.1_1399736_1400831_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|120aa|up_6|NC_013235.1_1400861_1401221_-	PRK01973, PRK01973, septum site-determining protein MinC	NA|212aa|up_5|NC_013235.1_1401288_1401924_+	NA	NA|288aa|up_4|NC_013235.1_1401948_1402812_+	PRK14193, PRK14193, bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional	NA|89aa|up_3|NC_013235.1_1402808_1403075_+	pfam11222, DUF3017, Protein of unknown function (DUF3017)	NA|154aa|up_2|NC_013235.1_1403085_1403547_-	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|405aa|up_1|NC_013235.1_1403748_1404963_+	PRK08299, PRK08299, NADP-dependent isocitrate dehydrogenase	NA|466aa|up_0|NC_013235.1_1405092_1406490_-	pfam01548, DEDD_Tnp_IS110, Transposase	NA|198aa|down_0|NC_013235.1_1407967_1408561_+	NA	NA|494aa|down_1|NC_013235.1_1408672_1410154_+	pfam00665, rve, Integrase core domain	NA|272aa|down_2|NC_013235.1_1410150_1410966_+	COG3267, ExeA, Type II secretory pathway, component ExeA (predicted ATPase) [Intracellular trafficking and secretion]	NA|66aa|down_3|NC_013235.1_1410969_1411167_-	NA	NA|466aa|down_4|NC_013235.1_1412245_1413643_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|495aa|down_5|NC_013235.1_1413802_1415287_-	PRK14713, PRK14713, bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA|298aa|down_6|NC_013235.1_1415644_1416538_+	pfam04909, Amidohydro_2, Amidohydrolase	NA|210aa|down_7|NC_013235.1_1416534_1417164_+	cd10548, cupin_CDO, cysteine dioxygenase, cupin domain	NA|191aa|down_8|NC_013235.1_1417202_1417775_+	TIGR03968, transcriptional_regulator_TetR_family, mycofactocin system transcriptional regulator	NA|243aa|down_9|NC_013235.1_1417767_1418496_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	7	1629509-1629615	6	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Orphan	TCACATTCGGTGCAGGTTCATCCGCGC	27	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA,NA	NA|206aa|up_9|NC_013235.1_1617859_1618477_-	COG3402, COG3402, Uncharacterized conserved protein [Function unknown]	NA|618aa|up_8|NC_013235.1_1618773_1620627_+	PRK07789, PRK07789, acetolactate synthase 1 catalytic subunit; Validated	NA|171aa|up_7|NC_013235.1_1620719_1621232_+	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed	NA|343aa|up_6|NC_013235.1_1621315_1622344_+	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional	NA|241aa|up_5|NC_013235.1_1622436_1623159_-	TIGR01649, Heterogeneous_nuclear_ribonucleoprotein_L, hnRNP-L/PTB/hephaestus splicing factor family	NA|189aa|up_4|NC_013235.1_1623197_1623764_-	pfam09849, DUF2076, Uncharacterized protein conserved in bacteria (DUF2076)	NA|531aa|up_3|NC_013235.1_1624107_1625700_+	PRK13581, PRK13581, D-3-phosphoglycerate dehydrogenase; Provisional	NA|341aa|up_2|NC_013235.1_1625833_1626856_+	PRK03437, PRK03437, 3-isopropylmalate dehydrogenase; Provisional	NA|568aa|up_1|NC_013235.1_1626890_1628594_+	PRK12344, PRK12344, putative alpha-isopropylmalate/homocitrate synthase family transferase; Provisional	NA|258aa|up_0|NC_013235.1_1628626_1629400_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|513aa|down_0|NC_013235.1_1629735_1631274_+	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|260aa|down_1|NC_013235.1_1631266_1632046_+	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]	NA|238aa|down_2|NC_013235.1_1632419_1633133_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|487aa|down_3|NC_013235.1_1633223_1634684_+	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit	NA|196aa|down_4|NC_013235.1_1634727_1635315_+	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit	NA|223aa|down_5|NC_013235.1_1635548_1636217_+	cd13836, IHF_B, Beta subunit of integration host factor (IHFB)	NA|302aa|down_6|NC_013235.1_1636370_1637276_-	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily	NA|723aa|down_7|NC_013235.1_1637265_1639434_-	PRK05443, PRK05443, polyphosphate kinase; Provisional	NA|248aa|down_8|NC_013235.1_1639796_1640540_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|333aa|down_9|NC_013235.1_1640548_1641547_+	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	8	2460531-2460638	7	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Orphan	GGCCGCTGGGCTGATCAAACCCGCG	25	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA,NA|161aa|down_5|NC_013235.1_2465634_2466117_-,NA|90aa|down_6|NC_013235.1_2466253_2466523_+	NA|452aa|up_9|NC_013235.1_2451517_2452873_+	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only]	NA|93aa|up_8|NC_013235.1_2453071_2453350_+	COG1359, COG1359, Uncharacterized conserved protein [Function unknown]	NA|104aa|up_7|NC_013235.1_2453428_2453740_+	pfam08922, DUF1905, Domain of unknown function (DUF1905)	NA|303aa|up_6|NC_013235.1_2453767_2454676_-	cd08423, PBP2_LTTR_like_6, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator, contains the type 2 periplasmic binding fold	NA|320aa|up_5|NC_013235.1_2454746_2455706_+	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter	NA|254aa|up_4|NC_013235.1_2455839_2456601_+	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|161aa|up_3|NC_013235.1_2456616_2457099_+	pfam12263, DUF3611, Protein of unknown function (DUF3611)	NA|170aa|up_2|NC_013235.1_2457126_2457636_-	cd04301, NAT_SF, N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate	NA|502aa|up_1|NC_013235.1_2457601_2459107_+	COG3214, COG3214, Uncharacterized protein conserved in bacteria [Function unknown]	NA|470aa|up_0|NC_013235.1_2459116_2460526_+	COG0405, Ggt, Gamma-glutamyltransferase [Amino acid transport and metabolism]	NA|466aa|down_0|NC_013235.1_2461090_2462488_+	pfam01548, DEDD_Tnp_IS110, Transposase	NA|344aa|down_1|NC_013235.1_2462588_2463620_-	pfam13349, DUF4097, Putative adhesin	NA|190aa|down_2|NC_013235.1_2463682_2464252_-	pfam05534, HicB, HicB family	NA|182aa|down_3|NC_013235.1_2464319_2464865_+	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|249aa|down_4|NC_013235.1_2464861_2465608_+	PRK00847, thyX, FAD-dependent thymidylate synthase; Reviewed	NA|161aa|down_5|NC_013235.1_2465634_2466117_-	NA	NA|90aa|down_6|NC_013235.1_2466253_2466523_+	NA	NA|1116aa|down_7|NC_013235.1_2466551_2469899_-	cd04852, Peptidases_S8_3, Peptidase S8 family domain, uncharacterized subfamily 3	NA|210aa|down_8|NC_013235.1_2470129_2470759_+	TIGR03085, TIGR03085, TIGR03085 family protein	NA|631aa|down_9|NC_013235.1_2471610_2473503_+	COG0595, COG0595, mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	9	3336213-3338504	8,5,5,6,7,8	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR,PILER-CR	no		WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Orphan	GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGCTCATCCCCGCGGGCGCGGGGAGCAC,GGCTCATCCCCGCGGGCGCGGGGAGCAC,GGGCTCATCCCCGCGGGCGCGGGGAGCAC	29,29,29,28,28,29	0	0	NA	NA	I-E:I-E:I-E:I-E:I-E:I-E	37,36,26,26,26,26	37	Orphan	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|71aa|up_7|NC_013235.1_3327099_3327312_+,NA|152aa|down_2|NC_013235.1_3340273_3340729_-	NA|740aa|up_9|NC_013235.1_3323505_3325725_-	PRK05298, PRK05298, excinuclease ABC subunit UvrB	NA|405aa|up_8|NC_013235.1_3325735_3326950_-	PRK03333, coaE, dephospho-CoA kinase/protein folding accessory domain-containing protein; Provisional	NA|71aa|up_7|NC_013235.1_3327099_3327312_+	NA	NA|239aa|up_6|NC_013235.1_3327370_3328087_-	PRK11892, PRK11892, pyruvate dehydrogenase subunit beta; Provisional	NA|486aa|up_5|NC_013235.1_3328261_3329719_-	PRK07899, rpsA, 30S ribosomal protein S1; Reviewed	NA|287aa|up_4|NC_013235.1_3330036_3330897_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|127aa|up_3|NC_013235.1_3330930_3331311_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|888aa|up_2|NC_013235.1_3331473_3334137_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|155aa|up_1|NC_013235.1_3334271_3334736_+	TIGR00369, Putative_esterase, uncharacterized domain 1	NA|290aa|up_0|NC_013235.1_3334970_3335840_+	pfam18741, MTES_1575, REase_MTES_1575	NA|422aa|down_0|NC_013235.1_3338600_3339866_+	pfam00665, rve, Integrase core domain	NA|138aa|down_1|NC_013235.1_3339865_3340279_+	PRK06526, PRK06526, transposase; Provisional	NA|152aa|down_2|NC_013235.1_3340273_3340729_-	NA	NA|720aa|down_3|NC_013235.1_3340725_3342885_-	cd01187, INT_tnpB_C_Tn554, Putative Transposase B from transposon Tn554, C-terminal catalytic domain	NA|394aa|down_4|NC_013235.1_3342874_3344056_-	cd01186, INT_tnpA_C_Tn554, Putative Transposase A from transposon Tn554, C-terminal catalytic domain	NA|535aa|down_5|NC_013235.1_3345952_3347557_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|260aa|down_6|NC_013235.1_3347553_3348333_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|435aa|down_7|NC_013235.1_3355242_3356547_+	pfam01610, DDE_Tnp_ISL3, Transposase	cas2|125aa|down_8|NC_013235.1_3358885_3359260_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|319aa|down_9|NC_013235.1_3359247_3360204_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	10	3344692-3345758	9,9,6	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Type I-E	GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGGCTCATCCCCGCGGGCGCGGGGAGCAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	17,17,17	17	TypeI-E	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|152aa|up_2|NC_013235.1_3340273_3340729_-,NA	NA|287aa|up_9|NC_013235.1_3330036_3330897_+	pfam13649, Methyltransf_25, Methyltransferase domain	NA|127aa|up_8|NC_013235.1_3330930_3331311_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|888aa|up_7|NC_013235.1_3331473_3334137_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|155aa|up_6|NC_013235.1_3334271_3334736_+	TIGR00369, Putative_esterase, uncharacterized domain 1	NA|290aa|up_5|NC_013235.1_3334970_3335840_+	pfam18741, MTES_1575, REase_MTES_1575	NA|422aa|up_4|NC_013235.1_3338600_3339866_+	pfam00665, rve, Integrase core domain	NA|138aa|up_3|NC_013235.1_3339865_3340279_+	PRK06526, PRK06526, transposase; Provisional	NA|152aa|up_2|NC_013235.1_3340273_3340729_-	NA	NA|720aa|up_1|NC_013235.1_3340725_3342885_-	cd01187, INT_tnpB_C_Tn554, Putative Transposase B from transposon Tn554, C-terminal catalytic domain	NA|394aa|up_0|NC_013235.1_3342874_3344056_-	cd01186, INT_tnpA_C_Tn554, Putative Transposase A from transposon Tn554, C-terminal catalytic domain	NA|535aa|down_0|NC_013235.1_3345952_3347557_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|260aa|down_1|NC_013235.1_3347553_3348333_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|435aa|down_2|NC_013235.1_3355242_3356547_+	pfam01610, DDE_Tnp_ISL3, Transposase	cas2|125aa|down_3|NC_013235.1_3358885_3359260_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|319aa|down_4|NC_013235.1_3359247_3360204_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|down_5|NC_013235.1_3360200_3360848_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|253aa|down_6|NC_013235.1_3360849_3361608_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|379aa|down_7|NC_013235.1_3361604_3362741_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|216aa|down_8|NC_013235.1_3362737_3363385_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|556aa|down_9|NC_013235.1_3363381_3365049_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	11	3348443-3355073	10,7,10,11	CRISPRCasFinder,CRT,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Type I-E	GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGCTCATCCCCGCGGGCGCGGGGAGCAC,GGCTCATCCCCGCGGGCGCGGGGAGCAC	29,29,28,28	0	0	NA	NA	I-E:I-E:I-E:I-E	108,108,100,100	108	TypeI-E	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|152aa|up_4|NC_013235.1_3340273_3340729_-,NA	NA|888aa|up_9|NC_013235.1_3331473_3334137_-	PRK05755, PRK05755, DNA polymerase I; Provisional	NA|155aa|up_8|NC_013235.1_3334271_3334736_+	TIGR00369, Putative_esterase, uncharacterized domain 1	NA|290aa|up_7|NC_013235.1_3334970_3335840_+	pfam18741, MTES_1575, REase_MTES_1575	NA|422aa|up_6|NC_013235.1_3338600_3339866_+	pfam00665, rve, Integrase core domain	NA|138aa|up_5|NC_013235.1_3339865_3340279_+	PRK06526, PRK06526, transposase; Provisional	NA|152aa|up_4|NC_013235.1_3340273_3340729_-	NA	NA|720aa|up_3|NC_013235.1_3340725_3342885_-	cd01187, INT_tnpB_C_Tn554, Putative Transposase B from transposon Tn554, C-terminal catalytic domain	NA|394aa|up_2|NC_013235.1_3342874_3344056_-	cd01186, INT_tnpA_C_Tn554, Putative Transposase A from transposon Tn554, C-terminal catalytic domain	NA|535aa|up_1|NC_013235.1_3345952_3347557_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|260aa|up_0|NC_013235.1_3347553_3348333_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|435aa|down_0|NC_013235.1_3355242_3356547_+	pfam01610, DDE_Tnp_ISL3, Transposase	cas2|125aa|down_1|NC_013235.1_3358885_3359260_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|319aa|down_2|NC_013235.1_3359247_3360204_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|down_3|NC_013235.1_3360200_3360848_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|253aa|down_4|NC_013235.1_3360849_3361608_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|379aa|down_5|NC_013235.1_3361604_3362741_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|216aa|down_6|NC_013235.1_3362737_3363385_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|556aa|down_7|NC_013235.1_3363381_3365049_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|919aa|down_8|NC_013235.1_3365253_3368010_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|240aa|down_9|NC_013235.1_3368282_3369002_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	12	3356560-3358846	12,11,8,13	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Type I-E	GGGCTCATCCCCGCGGGCGCGGGGAGCACC,GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGGCTCATCCCCGCGGGCGCGGGGAGCAC,GGCTCATCCCCGCGGGCGCGGGGAGCAC	30,29,29,28	2	2	3356956-3356987|3356956-3356988	NC_013235.1_3905649-3905680|NC_013235.1_3905649-3905681	I-E:I-E:I-E:I-E	35,37,37,35	37	TypeI-E	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|152aa|up_5|NC_013235.1_3340273_3340729_-,NA	NA|155aa|up_9|NC_013235.1_3334271_3334736_+	TIGR00369, Putative_esterase, uncharacterized domain 1	NA|290aa|up_8|NC_013235.1_3334970_3335840_+	pfam18741, MTES_1575, REase_MTES_1575	NA|422aa|up_7|NC_013235.1_3338600_3339866_+	pfam00665, rve, Integrase core domain	NA|138aa|up_6|NC_013235.1_3339865_3340279_+	PRK06526, PRK06526, transposase; Provisional	NA|152aa|up_5|NC_013235.1_3340273_3340729_-	NA	NA|720aa|up_4|NC_013235.1_3340725_3342885_-	cd01187, INT_tnpB_C_Tn554, Putative Transposase B from transposon Tn554, C-terminal catalytic domain	NA|394aa|up_3|NC_013235.1_3342874_3344056_-	cd01186, INT_tnpA_C_Tn554, Putative Transposase A from transposon Tn554, C-terminal catalytic domain	NA|535aa|up_2|NC_013235.1_3345952_3347557_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|260aa|up_1|NC_013235.1_3347553_3348333_+	pfam01695, IstB_IS21, IstB-like ATP binding protein	NA|435aa|up_0|NC_013235.1_3355242_3356547_+	pfam01610, DDE_Tnp_ISL3, Transposase	cas2|125aa|down_0|NC_013235.1_3358885_3359260_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|319aa|down_1|NC_013235.1_3359247_3360204_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|216aa|down_2|NC_013235.1_3360200_3360848_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|253aa|down_3|NC_013235.1_3360849_3361608_-	cd09756, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas7|379aa|down_4|NC_013235.1_3361604_3362741_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|216aa|down_5|NC_013235.1_3362737_3363385_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|556aa|down_6|NC_013235.1_3363381_3365049_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|919aa|down_7|NC_013235.1_3365253_3368010_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|240aa|down_8|NC_013235.1_3368282_3369002_-	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]	NA|297aa|down_9|NC_013235.1_3368988_3369879_-	COG0411, LivG, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
GCF_000024365.1_ASM2436v1	NC_013235	Nakamurella multipartita DSM 44233, complete sequence	13	5310407-5310516	12	CRISPRCasFinder	no		WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	Orphan	TTCAGCGCGGCAAAGATCAGCGAAGC	26	0	0	NA	NA	NA	1	1	Orphan	WYL,csa3,Cas9_archaeal,PD-DExK,cas10,csm3gr7,csx10gr5,csx24,cas6,RT,cas1,cas2,DEDDh,DinG,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	NA|59aa|up_3|NC_013235.1_5304651_5304828_-,NA|248aa|down_0|NC_013235.1_5310996_5311740_-,NA|215aa|down_3|NC_013235.1_5315448_5316093_+,NA|154aa|down_4|NC_013235.1_5316100_5316562_-	NA|157aa|up_9|NC_013235.1_5299596_5300067_-	cd00886, MogA_MoaB, MogA_MoaB family	NA|146aa|up_8|NC_013235.1_5300063_5300501_-	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC	NA|331aa|up_7|NC_013235.1_5300581_5301574_-	COG1609, PurR, Transcriptional regulators [Transcription]	NA|509aa|up_6|NC_013235.1_5301931_5303458_+	COG2213, MtlA, Phosphotransferase system, mannitol-specific IIBC component [Carbohydrate transport and metabolism]	NA|146aa|up_5|NC_013235.1_5303498_5303936_+	COG4668, MtlA, Mannitol/fructose-specific phosphotransferase system, IIA domain [Carbohydrate transport and metabolism]	NA|175aa|up_4|NC_013235.1_5304055_5304580_-	cd04182, GT_2_like_f, GT_2_like_f is a subfamily of the glycosyltransferase family 2 (GT-2) with unknown function	NA|59aa|up_3|NC_013235.1_5304651_5304828_-	NA	NA|759aa|up_2|NC_013235.1_5305001_5307278_+	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|330aa|up_1|NC_013235.1_5307682_5308672_-	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|465aa|up_0|NC_013235.1_5308841_5310236_-	pfam00754, F5_F8_type_C, F5/8 type C domain	NA|248aa|down_0|NC_013235.1_5310996_5311740_-	NA	NA|322aa|down_1|NC_013235.1_5311798_5312764_+	cd19087, AKR_AKR12A1_B1_C1, AKR12A, AKR12B,  AKR12C families of aldo-keto reductase (AKR)	NA|862aa|down_2|NC_013235.1_5312786_5315372_-	pfam12029, DUF3516, Domain of unknown function (DUF3516)	NA|215aa|down_3|NC_013235.1_5315448_5316093_+	NA	NA|154aa|down_4|NC_013235.1_5316100_5316562_-	NA	NA|266aa|down_5|NC_013235.1_5316592_5317390_-	COG1414, IclR, Transcriptional regulator [Transcription]	NA|369aa|down_6|NC_013235.1_5317401_5318508_-	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase	NA|475aa|down_7|NC_013235.1_5318790_5320215_+	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily	NA|251aa|down_8|NC_013235.1_5320266_5321019_+	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism]	NA|257aa|down_9|NC_013235.1_5323455_5324226_-	COG2186, FadR, Transcriptional regulators [Transcription]
