The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012969	Methylovorus glucosetrophus SIP3-4, complete sequence	2995511	1268790	1276792	2995511	tRNA	Acinetobacter_phage(16.67%)	7	NA	NA
WP_015829935.1|1268790_1269312_-	Smr/MutS family protein	NA	A0A0P0IDT4	Acinetobacter_phage	31.7	1.8e-14
WP_015829936.1|1269476_1270427_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	41.8	2.3e-60
WP_015829937.1|1270481_1270946_-	DNA starvation/stationary phase protection protein	NA	A0A2H4N7L5	Lake_Baikal_phage	38.0	6.3e-24
WP_148211151.1|1271154_1273491_+	DNA translocase FtsK 4TM domain-containing protein	NA	G1FGP1	Mycobacterium_phage	50.4	1.5e-84
WP_015829939.1|1273494_1274124_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_015829940.1|1274146_1275469_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	39.5	3.4e-78
WP_015829941.1|1275502_1276792_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.5	4.4e-91
>prophage 2
NC_012969	Methylovorus glucosetrophus SIP3-4, complete sequence	2995511	1547052	1559729	2995511		Enterobacteria_phage(33.33%)	15	NA	NA
WP_015830130.1|1547052_1547601_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	39.0	4.2e-27
WP_015830131.1|1547709_1548954_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_015830132.1|1548970_1549279_+	cytochrome c	NA	NA	NA	NA	NA
WP_041370421.1|1549342_1550206_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
WP_015830134.1|1550332_1551250_+	histone deacetylase family protein	NA	A0A2K9L2T7	Tupanvirus	30.5	1.3e-36
WP_013442299.1|1551345_1551786_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
WP_015830135.1|1551838_1552744_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	33.3	5.4e-27
WP_015830136.1|1552765_1553311_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.1	6.0e-50
WP_015830137.1|1553310_1554189_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	61.3	2.5e-98
WP_015830138.1|1554185_1555262_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.5	1.8e-85
WP_015830139.1|1555278_1555983_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	38.3	2.5e-40
WP_015830140.1|1555979_1556444_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	49.0	2.3e-34
WP_015830141.1|1556446_1557166_-	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_015830142.1|1557194_1557947_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_015830143.1|1557965_1559729_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	34.2	6.0e-06
>prophage 3
NC_012969	Methylovorus glucosetrophus SIP3-4, complete sequence	2995511	1716891	1723904	2995511	holin	Pseudomonas_phage(42.86%)	9	NA	NA
WP_015830263.1|1716891_1718856_+	acyltransferase	NA	A0A193GZ69	Enterobacter_phage	42.9	3.6e-60
WP_015830264.1|1718891_1719551_+	SOS response-associated peptidase	NA	A0A218MNF5	uncultured_virus	38.2	2.4e-37
WP_015830265.1|1719528_1719762_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148211233.1|1719868_1720267_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	50.4	8.1e-28
WP_015830267.1|1720263_1721538_+	Y-family DNA polymerase	NA	I6RSM4	Salmonella_phage	47.5	1.0e-100
WP_015830268.1|1721551_1722376_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_148211165.1|1722461_1722953_-	hypothetical protein	NA	A0A2H4GYE7	Pseudomonas_phage	39.3	1.3e-14
WP_015830270.1|1723023_1723380_-|holin	phage holin family protein	holin	A0A172PZR6	Pseudomonas_phage	41.8	8.0e-11
WP_015830271.1|1723388_1723904_-	transglycosylase SLT domain-containing protein	NA	A0A2H4GYF1	Pseudomonas_phage	66.7	3.0e-59
>prophage 4
NC_012969	Methylovorus glucosetrophus SIP3-4, complete sequence	2995511	1731239	1748101	2995511	capsid,terminase	Pseudomonas_phage(50.0%)	16	NA	NA
WP_015830278.1|1731239_1735619_-	tape measure protein	NA	B7SE05	Pseudomonas_virus	38.2	2.6e-34
WP_015830279.1|1735944_1736358_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015830280.1|1736467_1737670_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015830281.1|1737733_1738141_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_015830282.1|1738137_1738566_-	hypothetical protein	NA	A0A220IHC8	Escherichia_phage	41.7	5.3e-17
WP_041370062.1|1738562_1739147_-	hypothetical protein	NA	A0A0S0MZY1	Pseudomonas_phage	33.6	6.8e-07
WP_015830284.1|1739240_1739744_-	hypothetical protein	NA	A0A172PZS8	Pseudomonas_phage	42.6	1.3e-19
WP_015830285.1|1739829_1740249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015830286.1|1740309_1741278_-	hypothetical protein	NA	R9TJ64	Synechococcus_phage	63.6	2.6e-112
WP_015830287.1|1741313_1742108_-	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	51.4	1.3e-45
WP_190274873.1|1742226_1742550_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015830289.1|1742785_1743010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015830290.1|1743030_1744899_-|capsid	minor capsid protein	capsid	A0A0H5BBX3	Pseudomonas_phage	46.4	5.8e-84
WP_015830291.1|1744901_1746350_-	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	51.0	4.4e-124
WP_015830292.1|1746342_1747629_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	59.7	7.9e-149
WP_015830293.1|1747618_1748101_-	hypothetical protein	NA	A0A2R4ALD0	Vibrio_phage	46.5	2.0e-28
>prophage 5
NC_012969	Methylovorus glucosetrophus SIP3-4, complete sequence	2995511	1758880	1774162	2995511	integrase	uncultured_Caudovirales_phage(22.22%)	13	1761959:1761974	1780708:1780723
WP_015830321.1|1758880_1760068_+	hypothetical protein	NA	A0A2H4JAZ0	uncultured_Caudovirales_phage	50.6	2.4e-67
WP_015830322.1|1760125_1761175_+	hypothetical protein	NA	A0A2H4J6P1	uncultured_Caudovirales_phage	47.6	1.5e-44
WP_015830323.1|1761329_1761860_+	hypothetical protein	NA	NA	NA	NA	NA
1761959:1761974	attL	CGCATTCAGGTGAGTG	NA	NA	NA	NA
WP_015830324.1|1762016_1764533_+	DNA methylase N-4	NA	A0A1J0GPR3	Mycobacterium_phage	58.9	1.5e-292
WP_015830325.1|1764529_1766350_+	DNA cytosine methyltransferase	NA	Q5QF27	Pseudomonas_virus	46.2	7.7e-150
WP_015830326.1|1766346_1766562_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015830327.1|1766558_1767038_+	DUF1643 domain-containing protein	NA	A0A0U1W068	Pseudomonas_phage	63.5	2.1e-54
WP_015830328.1|1767034_1767622_+	heat shock protein DnaJ domain-containing protein	NA	A0A1P8VV96	Erythrobacter_phage	37.1	1.0e-26
WP_015830330.1|1767857_1768559_+	hypothetical protein	NA	A0A223W062	Agrobacterium_phage	39.3	1.1e-38
WP_148211234.1|1768942_1769176_+	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
WP_015830333.1|1769163_1770384_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	Q7M297	Enterobacteria_phage	38.1	2.5e-72
WP_015830334.1|1770700_1771972_-	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA	NA
WP_015830335.1|1772329_1774162_+	DNA polymerase III subunit gamma/tau	NA	A0A1L2BWV7	Bacteriophage	38.5	4.1e-50
1780708:1780723	attR	CACTCACCTGAATGCG	NA	NA	NA	NA
>prophage 6
NC_012969	Methylovorus glucosetrophus SIP3-4, complete sequence	2995511	1924630	1933013	2995511		uncultured_Caudovirales_phage(14.29%)	7	NA	NA
WP_015830442.1|1924630_1924981_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	61.2	1.1e-33
WP_015830443.1|1925022_1926099_-	acyltransferase	NA	B5WZU0	Pseudomonas_phage	26.0	6.0e-09
WP_015830444.1|1926196_1928776_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	25.0	5.6e-29
WP_015830445.1|1928903_1929548_+	lytic transglycosylase domain-containing protein	NA	I1VXB7	Halocynthia_phage	29.8	6.5e-11
WP_013442599.1|1929557_1930457_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	49.7	1.2e-71
WP_015830446.1|1930577_1931561_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L5H6	Tupanvirus	39.3	8.1e-53
WP_015830447.1|1931594_1933013_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.0	1.7e-51
>prophage 7
NC_012969	Methylovorus glucosetrophus SIP3-4, complete sequence	2995511	2506802	2514649	2995511	integrase,tRNA,transposase	Shigella_phage(16.67%)	7	2507774:2507788	2517951:2517965
WP_148211188.1|2506802_2507958_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	64.2	3.0e-99
2507774:2507788	attL	GCTTGCTGGTTGGAA	NA	NA	NA	NA
WP_083773310.1|2508036_2508729_+|integrase	tyrosine-type recombinase/integrase	integrase	F1BUS9	Erwinia_phage	49.6	1.0e-57
WP_013443084.1|2508882_2510799_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.4	5.1e-35
WP_015830907.1|2510865_2512620_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	39.8	3.3e-65
WP_015830908.1|2512733_2513180_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	47.3	1.4e-25
WP_013443087.1|2513264_2513477_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_015830909.1|2513608_2514649_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	53.0	7.9e-99
2517951:2517965	attR	GCTTGCTGGTTGGAA	NA	NA	NA	NA
