The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	775175	827133	4570938	protease,transposase,tRNA	Escherichia_phage(25.0%)	46	NA	NA
WP_010723085.1|775175_776192_-|transposase	IS5-like element IS5 family transposase	transposase	Q38213	Escherichia_phage	100.0	4.4e-187
WP_000626849.1|776190_777327_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001297764.1|777333_778098_-	transcriptional regulator GlcC	NA	NA	NA	NA	NA
WP_000026117.1|778348_779848_+	glycolate oxidase subunit GlcD	NA	NA	NA	NA	NA
WP_000943100.1|779847_780900_+	glycolate oxidase subunit GlcE	NA	NA	NA	NA	NA
WP_001194661.1|780910_782134_+	glycolate oxidase subunit GlcF	NA	NA	NA	NA	NA
WP_000853256.1|782138_782543_+	protein GlcG	NA	NA	NA	NA	NA
WP_000084131.1|782564_784736_+	malate synthase G	NA	NA	NA	NA	NA
WP_000259302.1|785090_786773_+	glycolate permease GlcA	NA	NA	NA	NA	NA
WP_001034469.1|787257_791820_+|protease	lipoprotein metalloprotease SslE	protease	NA	NA	NA	NA
WP_001333829.1|792017_792827_+	prepilin peptidase PppA	NA	NA	NA	NA	NA
WP_001324279.1|792892_793303_+	type II secretion system pilot lipoprotein GspS-beta	NA	NA	NA	NA	NA
WP_000135077.1|793320_794316_+	type II secretion system protein GspC	NA	NA	NA	NA	NA
WP_000942785.1|795243_795780_+	GspM family type II secretion system protein YghD	NA	NA	NA	NA	NA
WP_000234514.1|796109_796817_-	DUF554 domain-containing protein	NA	NA	NA	NA	NA
WP_001326492.1|797214_799350_+	ornithine decarboxylase	NA	NA	NA	NA	NA
WP_001352368.1|800014_801223_-|transposase	IS4-like element ISVsa5 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	100.0	1.8e-235
WP_001339197.1|801352_802561_-|transposase	IS4-like element ISVsa5 family transposase	transposase	Q9E8P4	Bluetongue_virus	100.0	3.0e-235
WP_000760323.1|803533_804613_-	membrane-bound lytic murein transglycosylase MltC	NA	NA	NA	NA	NA
WP_000091700.1|804677_804953_-	oxidative damage protection protein	NA	NA	NA	NA	NA
WP_001321419.1|804980_806033_-	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
WP_000786911.1|806193_806913_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_001107564.1|806912_807239_+	YggL family protein	NA	NA	NA	NA	NA
WP_000984796.1|807422_808142_+	DUF2884 domain-containing protein	NA	NA	NA	NA	NA
WP_000394140.1|808317_809364_+	L-asparaginase 2	NA	NA	NA	NA	NA
WP_000745210.1|809480_810488_+	DUF1202 family protein	NA	NA	NA	NA	NA
WP_000239943.1|810642_811779_-	radical SAM family heme chaperone HemW	NA	NA	NA	NA	NA
WP_001174777.1|811771_812365_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
WP_000994920.1|812372_812663_-	YggU family protein	NA	NA	NA	NA	NA
WP_001094831.1|812659_813226_-	osmotic shock tolerance protein YggT	NA	NA	NA	NA	NA
WP_000997795.1|813243_813948_-	pyridoxal phosphate homeostasis protein	NA	NA	NA	NA	NA
WP_001326494.1|813965_814946_+	type IV pilus twitching motility protein PilT	NA	NA	NA	NA	NA
WP_000017106.1|815129_815546_-	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
WP_001053178.1|815545_816109_-	YqgE/AlgH family protein	NA	NA	NA	NA	NA
WP_000593273.1|816217_817168_-	glutathione synthase	NA	NA	NA	NA	NA
WP_001222509.1|817180_817912_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
WP_000286501.1|817991_818699_-	deoxyribonuclease I	NA	NA	NA	NA	NA
WP_001300769.1|818793_819291_-|protease	SprT family zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_012775975.1|819367_820762_-	galactose/proton symporter	NA	NA	NA	NA	NA
WP_001062128.1|821185_822340_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	63.2	4.0e-128
WP_001300469.1|822479_822647_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001303650.1|822643_822859_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001297406.1|822994_823126_+	acid stress response protein YqgB	NA	NA	NA	NA	NA
WP_001300904.1|823134_825111_+	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
WP_000105566.1|825248_826169_+	agmatinase	NA	NA	NA	NA	NA
WP_001326497.1|826374_827133_-|protease	metalloprotease LoiP	protease	NA	NA	NA	NA
>prophage 2
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	1029661	1042844	4570938		Escherichia_phage(50.0%)	12	NA	NA
WP_001295182.1|1029661_1030423_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
WP_000254708.1|1030416_1031043_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
WP_001272590.1|1031182_1032322_+	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
WP_000081550.1|1032384_1033377_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
WP_000104459.1|1033470_1034835_-	GntP family transporter	NA	NA	NA	NA	NA
WP_001136925.1|1034923_1035700_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
WP_001278994.1|1035704_1036343_-	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
WP_000590371.1|1036339_1037602_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	4.9e-135
WP_000847971.1|1037598_1038507_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	5.1e-118
WP_001295181.1|1038702_1039470_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.7	2.5e-70
WP_001141307.1|1039520_1040177_-	protein-serine/threonine phosphatase	NA	A0A077SLQ6	Escherichia_phage	46.6	8.6e-51
WP_001272928.1|1040282_1042844_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
>prophage 3
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	1627537	1636979	4570938		Enterobacteria_phage(85.71%)	10	NA	NA
WP_000569344.1|1627537_1628464_+	glycine betaine ABC transporter ATP binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.3e-23
WP_000783120.1|1628468_1629200_+	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA	NA
WP_001216966.1|1629180_1629288_-	protein YohO	NA	NA	NA	NA	NA
WP_001240403.1|1629347_1630079_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.5	9.7e-112
WP_001295431.1|1630300_1631986_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
WP_000598641.1|1631982_1632702_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
WP_001295430.1|1632748_1633219_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
WP_001296231.1|1633259_1633721_-	YehR family lipoprotein	NA	Q9EYF5	Enterobacteria_phage	99.3	3.2e-76
WP_001300967.1|1633845_1635846_-	SWIM zinc finger family protein	NA	Q9EYF6	Enterobacteria_phage	96.6	0.0e+00
WP_001300968.1|1635842_1636979_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.4	3.2e-162
>prophage 4
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	1724879	1733736	4570938		Enterobacteria_phage(42.86%)	8	NA	NA
WP_001115981.1|1724879_1726274_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	33.5	1.3e-19
WP_000183060.1|1726448_1727342_+	UTP--glucose-1-phosphate uridylyltransferase GalF	NA	A0A127AW70	Bacillus_phage	42.0	1.0e-46
WP_000699450.1|1727714_1728800_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	3.9e-101
WP_001023616.1|1728799_1729699_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.5	8.2e-28
WP_000857508.1|1729757_1730636_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	8.7e-107
WP_001100801.1|1730640_1731186_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	53.9	1.6e-47
WP_001060532.1|1731189_1732614_+	O7 family O-antigen flippase	NA	NA	NA	NA	NA
WP_000998544.1|1732623_1733736_+	dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase VioA	NA	A0A0P0YLZ6	Yellowstone_lake_phycodnavirus	25.7	1.3e-14
>prophage 5
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	2188010	2203633	4570938	transposase	Escherichia_phage(18.75%)	22	NA	NA
WP_000379591.1|2188010_2188163_-	DUF1391 family protein	NA	M4QQ57	Salicola_phage	53.2	6.6e-07
WP_000381212.1|2188331_2188739_-	helix-turn-helix domain-containing protein	NA	I6PD69	Cronobacter_phage	51.9	7.2e-32
WP_000921596.1|2188819_2189047_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_000705360.1|2189030_2189552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000054497.1|2189532_2190498_+	hypothetical protein	NA	U5P0A0	Shigella_phage	60.2	5.0e-55
WP_000887491.1|2191102_2191315_+	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	97.1	1.7e-29
WP_000981003.1|2191531_2191783_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012775982.1|2191849_2192128_+	hypothetical protein	NA	I6PCV7	Cronobacter_phage	48.4	5.7e-12
WP_001265279.1|2192129_2192780_+	DUF968 domain-containing protein	NA	Q8SBE5	Shigella_phage	70.3	2.6e-68
WP_001204787.1|2192797_2193175_+	antitermination protein	NA	Q777W5	Enterobacteria_phage	82.5	1.8e-53
WP_000780584.1|2193330_2193855_-	lipocalin family protein	NA	A0A1W6JNX6	Morganella_phage	52.9	1.0e-46
WP_085947598.1|2194224_2195387_-|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	4.0e-51
WP_164979075.1|2195410_2195587_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000896277.1|2195614_2195776_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000879385.1|2196095_2197349_+	hypothetical protein	NA	A0A0E3M194	Enterobacteria_phage	54.3	3.7e-127
WP_001205170.1|2197348_2197630_+	hypothetical protein	NA	A0A1X7QHA1	Escherichia_phage	47.8	4.5e-17
WP_000235975.1|2197639_2198344_+	hypothetical protein	NA	A0A1X7QGH6	Escherichia_phage	62.3	5.4e-59
WP_000355603.1|2198354_2198648_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000086527.1|2198875_2199466_-	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000836768.1|2199781_2200015_-	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_120795384.1|2200083_2200197_-	hypothetical protein	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000527826.1|2202172_2203633_+	mannitol dehydrogenase family protein	NA	G8DCZ3	Micromonas_pusilla_virus	29.3	2.8e-41
>prophage 6
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	2369929	2390651	4570938	integrase,tRNA,lysis	Escherichia_phage(34.78%)	29	2367641:2367655	2389812:2389826
2367641:2367655	attL	CAGAAAAAAGCGCGC	NA	NA	NA	NA
WP_000837924.1|2369929_2371063_+	porin OmpN	NA	Q1MVN1	Enterobacteria_phage	58.8	8.3e-118
WP_001300461.1|2371203_2371638_+	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.8	1.8e-28
WP_001157925.1|2371903_2372077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_120795384.1|2372416_2372530_+	hypothetical protein	NA	A0A1C9IHU6	Salmonella_phage	80.6	8.4e-07
WP_000836768.1|2372598_2372832_+	cold shock protein YdfK	NA	A0A192Y6D5	Salmonella_phage	88.3	1.1e-32
WP_000078178.1|2373148_2373739_+	recombinase family protein	NA	A0A0A7NPV4	Enterobacteria_phage	38.8	1.6e-24
WP_000355360.1|2373966_2374260_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000654171.1|2374272_2374551_-	hypothetical protein	NA	A0A0E3JSQ1	Enterobacteria_phage	55.4	2.9e-24
WP_012775984.1|2375232_2375628_-	ParB N-terminal domain-containing protein	NA	A0A0R6PD10	Moraxella_phage	58.7	3.1e-19
WP_001097897.1|2375765_2377223_-	Trk system potassium transporter TrkG	NA	NA	NA	NA	NA
WP_001228696.1|2377419_2377605_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.2	2.8e-15
WP_000992105.1|2377821_2378355_-	lysozyme	NA	K7PLY1	Enterobacteria_phage	96.0	4.8e-100
WP_000370546.1|2378460_2378733_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193293.1|2378698_2379043_-	YdfR family protein	NA	K7PGU6	Enterobacteria_phage	94.0	1.4e-36
WP_012775985.1|2379047_2379260_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	96.9	3.0e-29
WP_001169151.1|2379403_2379559_+	YdaF family protein	NA	M4QQ57	Salicola_phage	55.3	6.1e-08
WP_001312793.1|2379555_2380044_-	superinfection exclusion protein B	NA	NA	NA	NA	NA
WP_000560223.1|2380485_2380707_+	killing protein KilR	NA	A0A0U2RTC4	Escherichia_phage	98.6	2.0e-36
WP_001352098.1|2380706_2380877_+	conserved protein, Rac prophage	NA	A0A0U2SHB5	Escherichia_phage	71.4	3.6e-17
WP_000632297.1|2380951_2381227_+	protein RacC	NA	A0A0U2QW85	Escherichia_phage	96.7	1.4e-42
WP_000166319.1|2382420_2383230_+	recombination protein RecT	NA	A0A1P8DTF2	Proteus_phage	71.5	8.8e-106
WP_001317028.1|2383286_2383481_+	type I toxin-antitoxin system endodeoxyribonuclease toxin RalR	NA	A0A0U2QQP4	Escherichia_phage	96.9	5.8e-32
WP_000276809.1|2383473_2383683_+	double-strand break reduction protein RcbA	NA	A0A0U2QL97	Escherichia_phage	98.4	6.1e-27
WP_000079604.1|2383761_2383977_+	excisionase XisR	NA	A0A0U2RY08	Escherichia_phage	100.0	1.8e-37
WP_000040858.1|2383978_2385214_+|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	98.5	1.6e-239
WP_001157407.1|2385265_2386201_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	98.8	5.9e-146
WP_000123737.1|2386329_2387703_-	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
WP_000387388.1|2388180_2389164_-	zinc transporter ZntB	NA	NA	NA	NA	NA
WP_001301114.1|2389418_2390651_+	diguanylate cyclase DgcM	NA	A0A127AWB9	Bacillus_phage	35.0	3.1e-17
2389812:2389826	attR	GCGCGCTTTTTTCTG	NA	NA	NA	NA
>prophage 7
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	2836573	2909886	4570938	portal,protease,terminase,plate,capsid,integrase,lysis,tRNA,tail	Salmonella_phage(36.84%)	72	2829536:2829551	2912973:2912988
2829536:2829551	attL	GTTACCGCCATCGCCA	NA	NA	NA	NA
WP_000886683.1|2836573_2837866_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.2	1.5e-94
WP_000067755.1|2837956_2839300_-	replication-associated recombination protein RarA	NA	G3MBE0	Bacillus_virus	40.8	2.1e-80
WP_001295343.1|2839310_2839922_-	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA	NA
WP_000077053.1|2840076_2844105_-	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.7	1.2e-86
WP_000228473.1|2844239_2844734_-	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA	NA
WP_000537418.1|2845278_2846244_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	44.6	8.5e-63
WP_001043577.1|2846366_2848133_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	24.3	7.0e-23
WP_001202189.1|2848133_2849855_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	25.2	2.9e-21
WP_001241678.1|2849896_2850601_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
WP_001040187.1|2850885_2851104_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
WP_000934045.1|2852141_2854418_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.5	2.5e-166
WP_000520781.1|2854448_2854769_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.6e-13
WP_000410785.1|2855091_2855316_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	2.3e-16
WP_000188180.1|2855388_2857335_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.1	1.1e-37
WP_000746443.1|2857331_2858447_-	macrolide transporter subunit MacA	NA	NA	NA	NA	NA
WP_001355621.1|2858597_2859554_+	VirK/YbjX family protein	NA	NA	NA	NA	NA
WP_000599802.1|2859550_2861209_-	ATP-dependent endonuclease	NA	NA	NA	NA	NA
WP_001298299.1|2861633_2862329_+	aquaporin Z	NA	NA	NA	NA	NA
WP_000491142.1|2862823_2863723_+	L-lysine exporter LysO	NA	NA	NA	NA	NA
WP_000458809.1|2863866_2865519_+	hydroxylamine reductase	NA	NA	NA	NA	NA
WP_000178677.1|2865530_2866499_+	NADH oxidoreductase	NA	NA	NA	NA	NA
WP_000815335.1|2866631_2868350_+	ubiquinone-dependent pyruvate dehydrogenase	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	24.0	2.3e-31
WP_000566356.1|2868386_2869388_+	low-specificity L-threonine aldolase	NA	NA	NA	NA	NA
WP_001136577.1|2869398_2870829_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_001338420.1|2870927_2871941_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001255168.1|2871937_2872768_-	N-acetylmuramoyl-L-alanine amidase AmiD	NA	A0A1B0UZW5	Roseobacter_phage	30.0	5.7e-07
WP_001160737.1|2872764_2873088_-	heavy metal-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001270734.1|2873213_2873729_+	lipoprotein	NA	NA	NA	NA	NA
WP_000027205.1|2873946_2874675_+	arginine ABC transporter ATP-binding protein ArtP	NA	G9BWD6	Planktothrix_phage	36.7	6.0e-29
WP_000756569.1|2874692_2875424_+	arginine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001001691.1|2875430_2876147_+	arginine ABC transporter permease ArtQ	NA	NA	NA	NA	NA
WP_000464491.1|2876146_2876815_+	arginine ABC transporter permease ArtM	NA	NA	NA	NA	NA
WP_001295905.1|2877105_2877837_+	ABC transporter substrate-binding protein ArtJ	NA	NA	NA	NA	NA
WP_001149743.1|2878035_2879163_-	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	NA	A0A1X9I6F4	Streptococcus_phage	27.0	6.0e-28
WP_000389260.1|2879203_2879692_-	YbjO family protein	NA	NA	NA	NA	NA
WP_001061667.1|2879751_2880597_-	putrescine ABC transporter permease PotI	NA	NA	NA	NA	NA
WP_000105444.1|2880593_2881547_-	putrescine ABC transporter permease PotH	NA	NA	NA	NA	NA
WP_000996005.1|2881556_2882690_-	putrescine ABC transporter ATP-binding subunit PotG	NA	G3M9Y6	Bacillus_virus	34.0	1.4e-29
WP_000126069.1|2882784_2883897_-	spermidine/putrescine ABC transporter substrate-binding protein PotF	NA	NA	NA	NA	NA
WP_000203025.1|2884247_2884724_-	YbjN domain-containing protein	NA	NA	NA	NA	NA
WP_000684321.1|2884811_2885714_-	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	34.4	2.6e-37
WP_000189159.1|2885774_2886497_-	nitroreductase NfsA	NA	NA	NA	NA	NA
WP_001201560.1|2886480_2886768_-	DUF1418 family protein	NA	NA	NA	NA	NA
WP_001195240.1|2886927_2887185_+	glutaredoxin 1	NA	A0A2I7SAE2	Vibrio_phage	61.9	8.6e-23
WP_000681108.1|2887214_2887592_-	inner membrane protein YbjM	NA	NA	NA	NA	NA
WP_001024876.1|2887861_2889547_+	aspartate:alanine antiporter	NA	NA	NA	NA	NA
WP_000972391.1|2889782_2890001_-	ogr/Delta-like zinc finger family protein	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
WP_012767713.1|2890759_2891302_+|tail	tail fiber protein	tail	A0A0F7LCR3	Escherichia_phage	62.5	1.9e-56
WP_000368077.1|2891301_2891904_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	89.5	2.3e-98
WP_000280166.1|2891875_2892313_-|tail	tail assembly chaperone	tail	A0A0F7LDZ0	Escherichia_phage	75.0	1.7e-55
WP_000104800.1|2892314_2893937_-|tail	phage tail protein	tail	M1TAS6	Escherichia_phage	78.5	6.2e-151
WP_001086815.1|2893933_2894539_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	93.0	2.3e-111
WP_000268294.1|2894531_2895440_-|plate	baseplate assembly protein	plate	A0A1S6KZY6	Salmonella_phage	91.1	4.1e-144
WP_000177591.1|2895426_2895786_-	GPW/gp25 family protein	NA	A0A1S6KZZ4	Salmonella_phage	85.7	8.0e-51
WP_000993743.1|2895782_2896361_-|plate	phage baseplate assembly protein V	plate	A0A1S6KZX7	Salmonella_phage	85.9	3.6e-93
WP_000115390.1|2896464_2897271_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000829156.1|2897212_2897659_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	83.7	7.6e-59
WP_001039932.1|2897651_2898083_-|tail	phage tail protein	tail	E5G6N3	Salmonella_phage	93.0	3.8e-71
WP_000196203.1|2898178_2898607_-|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	88.7	8.1e-58
WP_000216259.1|2898743_2899496_-|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	94.7	3.1e-113
WP_001098413.1|2899638_2901405_+|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.1	0.0e+00
WP_000520360.1|2901404_2902430_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
WP_001320043.1|2902447_2903410_-	RNA-directed DNA polymerase	NA	NA	NA	NA	NA
WP_001034589.1|2903572_2904496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001059831.1|2904968_2905304_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001217575.1|2905496_2905730_-	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
WP_001154431.1|2905740_2905929_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	96.8	1.6e-26
WP_000460887.1|2906081_2907527_-	phage regulatory CII family protein	NA	E5G6L9	Salmonella_phage	97.0	4.5e-209
WP_001247707.1|2907559_2907781_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001047321.1|2907906_2908476_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	43.4	3.8e-39
WP_001321204.1|2908491_2908683_+	hypothetical protein	NA	A0A0R6PIH8	Moraxella_phage	68.2	4.0e-09
WP_000290930.1|2908869_2909886_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A218M4I3	Erwinia_phage	56.7	3.2e-105
2912973:2912988	attR	TGGCGATGGCGGTAAC	NA	NA	NA	NA
>prophage 8
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	2994324	3033649	4570938	portal,terminase,protease,holin,capsid,head,lysis,tail	Enterobacteria_phage(90.2%)	51	NA	NA
WP_001246632.1|2994324_2994945_-	outer membrane beta-barrel protein Lom	NA	A0A1U8QHD6	Enterobacteria_phage	100.0	8.3e-112
WP_000515495.1|2995006_2998405_-	host specificity protein J	NA	C6ZCZ5	Enterobacteria_phage	100.0	0.0e+00
WP_000090889.1|2998465_2999098_-|tail	tail assembly protein	tail	C6ZCZ4	Enterobacteria_phage	100.0	5.9e-97
WP_000194780.1|2999034_2999778_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	96.8	2.5e-147
WP_001152639.1|2999783_3000482_-|tail	phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	100.0	2.3e-134
WP_000847379.1|3000481_3000811_-|tail	phage tail protein	tail	A0A0K2FIE9	Enterobacteria_phage	100.0	9.6e-59
WP_000840207.1|3000807_3003369_-|tail	phage tail tape measure protein	tail	A0A0K2FI43	Enterobacteria_phage	100.0	0.0e+00
WP_000459457.1|3003361_3003796_-|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	100.0	6.9e-65
WP_000479153.1|3003777_3004200_-|tail	phage minor tail protein G	tail	A0A0K2FIQ8	Enterobacteria_phage	100.0	6.7e-73
WP_001349920.1|3004215_3004956_-|tail	phage tail protein	tail	A0A0K2FJ05	Enterobacteria_phage	100.0	7.8e-133
WP_000683105.1|3004963_3005359_-|tail	tail protein	tail	A0A0K2FIF4	Enterobacteria_phage	100.0	1.0e-70
WP_000975070.1|3005355_3005934_-|tail	phage tail protein	tail	A0A2R9YJK4	Escherichia_phage	100.0	2.7e-80
WP_000752979.1|3005945_3006299_-|head,tail	head-tail joining protein	head,tail	A0A0K2FJB7	Enterobacteria_phage	100.0	2.0e-62
WP_000158919.1|3006310_3006709_-	DNA-packaging protein FI	NA	A0A0K2FIR1	Enterobacteria_phage	100.0	3.1e-64
WP_000063280.1|3006750_3007776_-|capsid	major capsid protein	capsid	C6ZCY2	Enterobacteria_phage	100.0	7.1e-193
WP_001297109.1|3007831_3008164_-|head	head decoration protein	head	C6ZCY1	Enterobacteria_phage	100.0	2.2e-55
WP_000123343.1|3008173_3009493_-	S49 family peptidase	NA	A0A0K2FI53	Enterobacteria_phage	100.0	7.9e-237
WP_001359455.1|3009473_3011075_-|portal	phage portal protein	portal	A0A0K2FJC0	Enterobacteria_phage	100.0	5.9e-312
WP_000198149.1|3011071_3011278_-	gpW family protein	NA	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
WP_001027292.1|3011274_3013200_-|terminase	phage terminase large subunit family protein	terminase	A0A0K2FJ14	Enterobacteria_phage	100.0	0.0e+00
WP_000453580.1|3013174_3013720_-	DNA-packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	100.0	2.8e-95
WP_001421937.1|3014108_3014303_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	100.0	8.7e-28
WP_001031427.1|3014467_3014674_-	hypothetical protein	NA	A0A0K2FJ18	Enterobacteria_phage	100.0	5.8e-30
WP_012775990.1|3014959_3015370_+	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	100.0	2.5e-72
WP_000738491.1|3015659_3015953_+	serum resistance lipoprotein Bor	NA	C6ZCX3	Enterobacteria_phage	100.0	4.0e-48
WP_012738274.1|3016043_3016226_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	100.0	1.7e-17
WP_000229403.1|3016442_3016919_-	glycoside hydrolase family protein	NA	A0A0K2FIS2	Enterobacteria_phage	100.0	4.4e-89
WP_000783735.1|3016902_3017226_-|holin	phage holin, lambda family	holin	A0A0K2FJ23	Enterobacteria_phage	100.0	1.3e-52
WP_001235469.1|3017902_3018526_-	antitermination protein	NA	C6ZCW8	Enterobacteria_phage	100.0	1.8e-114
WP_000788910.1|3019322_3020024_-	hypothetical protein	NA	A0A0K2FIT1	Enterobacteria_phage	100.0	7.6e-130
WP_000185505.1|3020020_3020920_-	replication protein	NA	A0A0K2FJ31	Enterobacteria_phage	100.0	3.8e-174
WP_000035954.1|3020952_3021252_-	lambda phage CII family protein	NA	C6ZCW4	Enterobacteria_phage	100.0	2.1e-49
WP_000276885.1|3021367_3021553_-	Cro/Cl family transcriptional regulator	NA	K7PHK4	Enterobacteria_phage	100.0	1.2e-26
WP_001095982.1|3021633_3022284_+	LexA family transcriptional regulator	NA	K7PM82	Enterobacteria_phage	100.0	4.9e-123
WP_000256575.1|3022598_3022898_+	hypothetical protein	NA	C6ZCW1	Enterobacteria_phage	100.0	3.8e-46
WP_000213975.1|3022976_3023177_+	antirestriction Ral family protein	NA	A0A0K2FJE6	Enterobacteria_phage	100.0	1.4e-33
WP_000065374.1|3023359_3023728_+	DUF2528 family protein	NA	M1FPD2	Enterobacteria_phage	100.0	2.0e-65
WP_001198861.1|3023800_3023965_+|protease	protease FtsH-inhibitory lysogeny factor CIII	protease	Q776Q5	Enterobacteria_phage	100.0	1.1e-26
WP_000372937.1|3023933_3024077_+	host cell division inhibitory peptide Kil	NA	A0A0N7C2U2	Escherichia_phage	100.0	1.2e-18
WP_000995451.1|3024151_3024448_+	host-nuclease inhibitor protein Gam	NA	C6ZCV5	Enterobacteria_phage	100.0	2.1e-49
WP_000100844.1|3024453_3025239_+	phage recombination protein Bet	NA	A0A0K2FJF1	Enterobacteria_phage	100.0	1.4e-148
WP_000186891.1|3025235_3025916_+	YqaJ viral recombinase family protein	NA	C6ZCV3	Enterobacteria_phage	100.0	3.5e-132
WP_000149542.1|3025912_3026095_+	DUF1317 domain-containing protein	NA	A0A1U8QQC1	Enterobacteria_phage	100.0	1.6e-28
WP_000548551.1|3026067_3026259_+	DUF1382 family protein	NA	A0A0K2FJ42	Enterobacteria_phage	100.0	2.8e-26
WP_000763367.1|3026650_3026872_+	TraR/DksA family transcriptional regulator	NA	A0A0K2FI84	Escherichia_phage	100.0	2.9e-35
WP_001289873.1|3026868_3027417_+	ead/Ea22-like family protein	NA	A0A0K2FJF6	Enterobacteria_phage	100.0	2.2e-100
WP_000026224.1|3027608_3027890_+	hypothetical protein	NA	A0A0K2FIU9	Enterobacteria_phage	100.0	2.8e-51
WP_000545733.1|3027978_3028146_+	hypothetical protein	NA	A0A0K2FJ46	Enterobacteria_phage	100.0	1.3e-27
WP_002414258.1|3028185_3028404_+	excisionase	NA	C6ZCU6	Enterobacteria_phage	100.0	1.3e-35
WP_001092355.1|3029312_3031964_-	hypothetical protein	NA	C1KTT1	Enterobacteria_phage	100.0	0.0e+00
WP_000805902.1|3032566_3033649_-	DNA-binding transcriptional repressor LacI	NA	C6ZCU4	Enterobacteria_phage	100.0	7.5e-193
>prophage 9
NC_012947	Escherichia coli 'BL21-Gold(DE3)pLysS AG', complete sequence	4570938	3234761	3248476	4570938	integrase,lysis	Enterobacteria_phage(62.5%)	21	3242379:3242392	3249696:3249709
WP_001415975.1|3234761_3234956_+	YlcI/YnfO family protein	NA	A0A0K2FIR8	Escherichia_phage	96.9	4.3e-27
WP_000738423.1|3235316_3235610_+	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	91.8	2.0e-44
WP_001228695.1|3235700_3235883_-|lysis	prophage lysis lipoprotein RzoD	lysis	K7PHU6	Enterobacteria_phage	98.3	2.9e-17
WP_001135280.1|3236099_3236597_-	lysozyme RrrD	NA	M1FJA0	Enterobacteria_phage	97.6	1.1e-90
WP_000839596.1|3236596_3236812_-|lysis	phage lysis protein EssD	lysis	A5LH82	Enterobacteria_phage	100.0	9.0e-34
WP_001204780.1|3239449_3239833_-	antitermination protein QuuD	NA	A0A088CD47	Shigella_phage	84.2	4.0e-56
WP_000971071.1|3239918_3240059_-	YlcG family protein	NA	K7PHH3	Enterobacteria_phage	69.8	2.5e-08
WP_001099655.1|3240055_3240418_-	RusA family crossover junction endodeoxyribonuclease	NA	K7PM48	Enterobacteria_phage	97.4	7.3e-60
WP_000774479.1|3240414_3240705_-	DUF1364 domain-containing protein	NA	K7PGZ6	Enterobacteria_phage	95.8	2.3e-48
WP_000224907.1|3240697_3240868_-	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	67.9	5.3e-13
WP_001054340.1|3240867_3241323_-	DNA base-flipping protein YbcN	NA	I6PD71	Cronobacter_phage	66.9	4.1e-60
WP_001303586.1|3241319_3241421_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000881075.1|3241537_3242335_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001306955.1|3242344_3242896_-	Raf kinase inhibitor-like protein YbcL	NA	NA	NA	NA	NA
3242379:3242392	attL	GTTGCGATTTTATT	NA	NA	NA	NA
WP_000709082.1|3243360_3244887_-	recombinase family protein	NA	Q3HQV4	Burkholderia_phage	27.8	7.9e-31
WP_001299444.1|3244944_3245094_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001070454.1|3245141_3245474_-	SMR family multidrug efflux protein EmrE	NA	NA	NA	NA	NA
WP_000188870.1|3246255_3246471_+	hypothetical protein	NA	A0A1I9LJM7	Stx_converting_phage	100.0	1.0e-32
WP_000763373.1|3246569_3246788_+	TraR/DksA family transcriptional regulator	NA	M1FQT7	Enterobacteria_phage	95.8	1.8e-34
WP_000488419.1|3246835_3247114_+	DUF4222 domain-containing protein	NA	M1FPC8	Enterobacteria_phage	98.9	1.7e-48
WP_001318654.1|3247312_3248476_+|integrase	site-specific integrase	integrase	A0A088CD23	Shigella_phage	86.0	1.3e-198
3249696:3249709	attR	AATAAAATCGCAAC	NA	NA	NA	NA
