assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000023025.1_ASM2302v1	NC_012997	Teredinibacter turnerae T7901, complete sequence	1	496780-496875	1	CRISPRCasFinder	no		DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	Orphan	TGCTCTAACCAACTGAGCTACAGGCCC	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	NA|324aa|up_5|NC_012997.1_490967_491939_-,NA|76aa|up_4|NC_012997.1_492562_492790_-,NA|302aa|up_2|NC_012997.1_493218_494124_+,NA	NA|333aa|up_9|NC_012997.1_485822_486821_-	COG0460, ThrA, Homoserine dehydrogenase [Amino acid transport and metabolism]	NA|513aa|up_8|NC_012997.1_486987_488526_-	PRK05022, PRK05022, nitric oxide reductase transcriptional regulator NorR	NA|396aa|up_7|NC_012997.1_488779_489967_+	PRK13289, PRK13289, NO-inducible flavohemoprotein	NA|209aa|up_6|NC_012997.1_490246_490873_+	COG1853, COG1853, Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family [General function prediction only]	NA|324aa|up_5|NC_012997.1_490967_491939_-	NA	NA|76aa|up_4|NC_012997.1_492562_492790_-	NA	NA|68aa|up_3|NC_012997.1_492903_493107_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|302aa|up_2|NC_012997.1_493218_494124_+	NA	NA|428aa|up_1|NC_012997.1_494287_495571_-	TIGR04474, conserved_hypothetical_protein, three-Cys-motif partner protein	NA|248aa|up_0|NC_012997.1_495585_496329_-	pfam07505, DUF5131, Protein of unknown function (DUF5131)	NA|620aa|down_0|NC_012997.1_497221_499081_-	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|641aa|down_1|NC_012997.1_499223_501146_-	PRK05667, dnaG, DNA primase; Validated	NA|202aa|down_2|NC_012997.1_501259_501865_-	cd03049, GST_N_3, GST_N family, unknown subfamily 3; composed of uncharacterized bacterial proteins with similarity to GSTs	NA|485aa|down_3|NC_012997.1_502022_503477_-	PRK09287, PRK09287, NADP-dependent phosphogluconate dehydrogenase	NA|132aa|down_4|NC_012997.1_503695_504091_+	COG2315, MmcQ, Uncharacterized protein conserved in bacteria [Function unknown]	NA|326aa|down_5|NC_012997.1_504102_505080_-	PRK11768, PRK11768, serine/threonine protein kinase	NA|588aa|down_6|NC_012997.1_505122_506886_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|235aa|down_7|NC_012997.1_506992_507697_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|352aa|down_8|NC_012997.1_507823_508879_+	PRK15108, PRK15108, biotin synthase; Provisional	NA|399aa|down_9|NC_012997.1_508940_510137_+	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed
GCF_000023025.1_ASM2302v1	NC_012997	Teredinibacter turnerae T7901, complete sequence	2	3463277-3465294	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL	DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	Type I-U,Type I-C, Type I-U?	GTTTCAATCCACGCGCTCGCGAGGAGCGCGAA,GTTTCAATCCACGCGCTCGCGAGGAGCGCGAA,GTTTCAATCCACGCGCTCGCGAGGAGCGCGAA	32,32,32	0	0	NA	NA	I-C:I-C:I-C	30,30,29	30	TypeI-U?,TypeI-C,TypeI-U	DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	NA|60aa|up_5|NC_012997.1_3457266_3457446_+,NA|233aa|up_0|NC_012997.1_3461631_3462330_-,NA	NA|927aa|up_9|NC_012997.1_3450978_3453759_+	PRK09277, PRK09277, aconitate hydratase AcnA	NA|453aa|up_8|NC_012997.1_3453758_3455117_+	PRK00485, fumC, fumarate hydratase; Reviewed	NA|403aa|up_7|NC_012997.1_3455270_3456479_+	cd17538, REC_D1_PleD-like, first (D1) phosphoacceptor receiver (REC) domain of response regulator PleD and similar domains	NA|62aa|up_6|NC_012997.1_3456834_3457020_+	pfam11216, DUF3012, Protein of unknown function (DUF3012)	NA|60aa|up_5|NC_012997.1_3457266_3457446_+	NA	NA|101aa|up_4|NC_012997.1_3457893_3458196_+	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|234aa|up_3|NC_012997.1_3458319_3459021_+	pfam06468, Spond_N, Spondin_N	NA|252aa|up_2|NC_012997.1_3459031_3459787_+	pfam06468, Spond_N, Spondin_N	NA|478aa|up_1|NC_012997.1_3460201_3461635_-	COG3379, COG3379, Uncharacterized conserved protein [Function unknown]	NA|233aa|up_0|NC_012997.1_3461631_3462330_-	NA	cas2|98aa|down_0|NC_012997.1_3465472_3465766_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|340aa|down_1|NC_012997.1_3465780_3466800_-	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas4|213aa|down_2|NC_012997.1_3466780_3467419_-	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas7|281aa|down_3|NC_012997.1_3467486_3468329_-	cd09689, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas8c|678aa|down_4|NC_012997.1_3468325_3470359_-	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas5|237aa|down_5|NC_012997.1_3470355_3471066_-	cd09651, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas3|819aa|down_6|NC_012997.1_3471106_3473563_-	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	WYL|318aa|down_7|NC_012997.1_3473753_3474707_-	pfam13280, WYL, WYL domain	NA|522aa|down_8|NC_012997.1_3474909_3476475_+	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]	NA|494aa|down_9|NC_012997.1_3476628_3478110_-	CHL00195, ycf46, Ycf46; Provisional
GCF_000023025.1_ASM2302v1	NC_012997	Teredinibacter turnerae T7901, complete sequence	3	3572208-3572354	3	CRISPRCasFinder	no		DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	Orphan	GGCTGCGCCCAACAAAGAGTTTAGCCCGACGCCCGGGCCTACTTA	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	NA,NA|212aa|down_4|NC_012997.1_3577339_3577975_-	NA|728aa|up_9|NC_012997.1_3559064_3561248_-	PRK15098, PRK15098, beta-glucosidase BglX	NA|95aa|up_8|NC_012997.1_3561455_3561740_+	pfam00462, Glutaredoxin, Glutaredoxin	NA|276aa|up_7|NC_012997.1_3561780_3562608_-	pfam06629, MipA, MltA-interacting protein MipA	NA|706aa|up_6|NC_012997.1_3562733_3564851_-	PRK11824, PRK11824, polynucleotide phosphorylase/polyadenylase; Provisional	NA|90aa|up_5|NC_012997.1_3565051_3565321_-	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed	NA|314aa|up_4|NC_012997.1_3565463_3566405_-	PRK05033, truB, tRNA pseudouridine synthase B; Provisional	NA|133aa|up_3|NC_012997.1_3566408_3566807_-	PRK00521, rbfA, 30S ribosome-binding factor RbfA	NA|941aa|up_2|NC_012997.1_3566844_3569667_-	PRK05306, infB, translation initiation factor IF-2; Validated	NA|497aa|up_1|NC_012997.1_3569724_3571215_-	PRK09202, nusA, transcription elongation factor NusA; Validated	NA|153aa|up_0|NC_012997.1_3571285_3571744_-	PRK00092, PRK00092, ribosome maturation protein RimP; Reviewed	NA|346aa|down_0|NC_012997.1_3572961_3573999_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|305aa|down_1|NC_012997.1_3574056_3574971_-	pfam00497, SBP_bac_3, Bacterial extracellular solute-binding proteins, family 3	NA|157aa|down_2|NC_012997.1_3575474_3575945_-	pfam10973, DUF2799, Protein of unknown function (DUF2799)	NA|458aa|down_3|NC_012997.1_3575961_3577335_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|212aa|down_4|NC_012997.1_3577339_3577975_-	NA	NA|136aa|down_5|NC_012997.1_3578007_3578415_-	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR	NA|141aa|down_6|NC_012997.1_3578374_3578797_-	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family	NA|437aa|down_7|NC_012997.1_3578793_3580104_-	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion]	NA|256aa|down_8|NC_012997.1_3580117_3580885_-	pfam11932, DUF3450, Protein of unknown function (DUF3450)	NA|335aa|down_9|NC_012997.1_3581373_3582378_-	PRK09358, PRK09358, adenosine deaminase; Provisional
GCF_000023025.1_ASM2302v1	NC_012997	Teredinibacter turnerae T7901, complete sequence	4	4555712-4555825	4	CRISPRCasFinder	no		DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	Orphan	GCCAACCCCTTCGTTTTCAGCTTTGTCGCTGGCCACTCG	39	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	NA|165aa|up_6|NC_012997.1_4546849_4547344_+,NA|235aa|up_5|NC_012997.1_4547465_4548170_+,NA|117aa|down_1|NC_012997.1_4561574_4561925_-,NA|199aa|down_2|NC_012997.1_4562440_4563037_-,NA|91aa|down_5|NC_012997.1_4564869_4565142_-,NA|151aa|down_6|NC_012997.1_4565161_4565614_-,NA|79aa|down_7|NC_012997.1_4565952_4566189_-,NA|166aa|down_8|NC_012997.1_4566301_4566799_-	NA|393aa|up_9|NC_012997.1_4541375_4542554_-	cd08993, GH130, Glycosyl hydrolase family 130	NA|635aa|up_8|NC_012997.1_4542585_4544490_-	cd11477, SLC5sbd_u1, Uncharacterized bacterial solute carrier 5 subfamily; putative solute-binding domain	NA|411aa|up_7|NC_012997.1_4544671_4545904_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|165aa|up_6|NC_012997.1_4546849_4547344_+	NA	NA|235aa|up_5|NC_012997.1_4547465_4548170_+	NA	NA|279aa|up_4|NC_012997.1_4548273_4549110_-	pfam10067, DUF2306, Predicted membrane protein (DUF2306)	NA|374aa|up_3|NC_012997.1_4549385_4550507_+	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein	NA|127aa|up_2|NC_012997.1_4550713_4551094_+	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|343aa|up_1|NC_012997.1_4551194_4552223_+	pfam08874, DUF1835, Domain of unknown function (DUF1835)	NA|166aa|up_0|NC_012997.1_4552810_4553308_+	pfam13191, AAA_16, AAA ATPase domain	NA|1084aa|down_0|NC_012997.1_4558022_4561274_+	pfam13519, VWA_2, von Willebrand factor type A domain	NA|117aa|down_1|NC_012997.1_4561574_4561925_-	NA	NA|199aa|down_2|NC_012997.1_4562440_4563037_-	NA	NA|322aa|down_3|NC_012997.1_4563030_4563996_-	pfam01471, PG_binding_1, Putative peptidoglycan binding domain	NA|139aa|down_4|NC_012997.1_4564269_4564686_-	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|91aa|down_5|NC_012997.1_4564869_4565142_-	NA	NA|151aa|down_6|NC_012997.1_4565161_4565614_-	NA	NA|79aa|down_7|NC_012997.1_4565952_4566189_-	NA	NA|166aa|down_8|NC_012997.1_4566301_4566799_-	NA	NA|518aa|down_9|NC_012997.1_4566934_4568488_-	TIGR04141, conserved_hypothetical_protein, sporadically distributed protein, TIGR04141 family
GCF_000023025.1_ASM2302v1	NC_012997	Teredinibacter turnerae T7901, complete sequence	5	4571246-4571350	5	CRISPRCasFinder	no		DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	Orphan	GCTTTTCGCATGGCGGAAGCATTG	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	NA|91aa|up_8|NC_012997.1_4564869_4565142_-,NA|151aa|up_7|NC_012997.1_4565161_4565614_-,NA|79aa|up_6|NC_012997.1_4565952_4566189_-,NA|166aa|up_5|NC_012997.1_4566301_4566799_-,NA|140aa|up_3|NC_012997.1_4568635_4569055_-,NA|103aa|up_2|NC_012997.1_4569211_4569520_-,NA|109aa|up_0|NC_012997.1_4570878_4571205_+,NA|89aa|down_1|NC_012997.1_4574206_4574473_+,NA|271aa|down_2|NC_012997.1_4574600_4575413_+,NA|500aa|down_6|NC_012997.1_4581965_4583465_-,NA|236aa|down_7|NC_012997.1_4583493_4584201_-	NA|139aa|up_9|NC_012997.1_4564269_4564686_-	COG3791, COG3791, Uncharacterized conserved protein [Function unknown]	NA|91aa|up_8|NC_012997.1_4564869_4565142_-	NA	NA|151aa|up_7|NC_012997.1_4565161_4565614_-	NA	NA|79aa|up_6|NC_012997.1_4565952_4566189_-	NA	NA|166aa|up_5|NC_012997.1_4566301_4566799_-	NA	NA|518aa|up_4|NC_012997.1_4566934_4568488_-	TIGR04141, conserved_hypothetical_protein, sporadically distributed protein, TIGR04141 family	NA|140aa|up_3|NC_012997.1_4568635_4569055_-	NA	NA|103aa|up_2|NC_012997.1_4569211_4569520_-	NA	NA|177aa|up_1|NC_012997.1_4569681_4570212_-	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|109aa|up_0|NC_012997.1_4570878_4571205_+	NA	NA|360aa|down_0|NC_012997.1_4572166_4573246_+	TIGR04470, hypothetical_protein_ALIPUT_00462, radical SAM mobile pair protein B	NA|89aa|down_1|NC_012997.1_4574206_4574473_+	NA	NA|271aa|down_2|NC_012997.1_4574600_4575413_+	NA	NA|381aa|down_3|NC_012997.1_4575464_4576607_+	COG0270, Dcm, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|632aa|down_4|NC_012997.1_4576597_4578493_-	pfam09369, DUF1998, Domain of unknown function (DUF1998)	NA|1150aa|down_5|NC_012997.1_4578489_4581939_-	smart00490, HELICc, helicase superfamily c-terminal domain	NA|500aa|down_6|NC_012997.1_4581965_4583465_-	NA	NA|236aa|down_7|NC_012997.1_4583493_4584201_-	NA	NA|211aa|down_8|NC_012997.1_4584473_4585106_-	COG1040, ComFC, Predicted amidophosphoribosyltransferases [General function prediction only]	NA|298aa|down_9|NC_012997.1_4585102_4585996_-	pfam02481, DNA_processg_A, DNA recombination-mediator protein A
GCF_000023025.1_ASM2302v1	NC_012997	Teredinibacter turnerae T7901, complete sequence	6	4834731-4836553	2,6,2	PILER-CR,CRISPRCasFinder,CRT	no	cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	Type III-B, Type III-C?,Type III-C,Type III-D,Type III-A	GTTTCAACAGCCTTAGCGGCTA,GTTTCAACAGCCTTAGCGGCTAGACCTCCAGCGACGC,GTTTCAACAGCCTTAGCGGCTA	22,37,22	0	0	NA	NA	NA:NA:NA	25,25,25	25	TypeIII-B,TypeIII-C?,TypeIII-C,TypeIII-D,TypeIII-A	DEDDh,WYL,RT,csa3,DinG,cas2,cas1,cas4,cas7,cas8c,cas5,cas3,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7	NA|177aa|up_8|NC_012997.1_4824795_4825326_-,NA|52aa|down_0|NC_012997.1_4837474_4837630_+	NA|200aa|up_9|NC_012997.1_4823992_4824592_-	COG5340, COG5340, Predicted transcriptional regulator [Transcription]	NA|177aa|up_8|NC_012997.1_4824795_4825326_-	NA	cmr6gr7|361aa|up_7|NC_012997.1_4825347_4826430_-	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6	cmr5gr11|134aa|up_6|NC_012997.1_4826413_4826815_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr4gr7|299aa|up_5|NC_012997.1_4826811_4827708_-	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr3gr5|396aa|up_4|NC_012997.1_4827723_4828911_-	pfam09700, Cas_Cmr3, CRISPR-associated protein (Cas_Cmr3)	cas10|602aa|up_3|NC_012997.1_4828915_4830721_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|474aa|up_2|NC_012997.1_4830713_4832135_-	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	NA|444aa|up_1|NC_012997.1_4832580_4833912_-	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase	NA|50aa|up_0|NC_012997.1_4833891_4834041_+	pfam00356, LacI, Bacterial regulatory proteins, lacI family	NA|52aa|down_0|NC_012997.1_4837474_4837630_+	NA	NA|178aa|down_1|NC_012997.1_4837693_4838227_-	COG3038, CybB, Cytochrome B561 [Energy production and conversion]	NA|390aa|down_2|NC_012997.1_4838219_4839389_-	cd08153, srpA_like, Catalase-like heme-binding proteins similar to the uncharacterized srpA	NA|184aa|down_3|NC_012997.1_4839579_4840131_+	COG1595, RpoE, DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog [Transcription]	NA|256aa|down_4|NC_012997.1_4840123_4840891_+	COG5662, COG5662, Predicted transmembrane transcriptional regulator (anti-sigma factor) [Transcription]	NA|121aa|down_5|NC_012997.1_4841327_4841690_+	cd17562, REC_CheY4-like, phosphoacceptor receiver (REC) domain of chemotaxis response regulator CheY4 and similar CheY family proteins	NA|103aa|down_6|NC_012997.1_4841757_4842066_+	cd07043, STAS_anti-anti-sigma_factors, Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation	NA|702aa|down_7|NC_012997.1_4842077_4844183_+	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|684aa|down_8|NC_012997.1_4844221_4846273_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|185aa|down_9|NC_012997.1_4846288_4846843_+	cd00732, CheW, CheW, a small regulator protein, unique to the chemotaxis signalling in prokaryotes and archea
