The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	393692	465073	4553586	tRNA,plate,protease,transposase,integrase	Vibrio_phage(14.29%)	58	401416:401430	470830:470844
WP_016587989.1|393692_395285_+|transposase	IS66 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	62.2	1.3e-177
WP_016260143.1|395911_396157_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013060297.1|396477_397227_+	SDR family oxidoreductase	NA	W8CYX9	Bacillus_phage	49.4	1.9e-09
WP_016260176.1|397466_398144_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_013060299.1|398541_399987_+	ATP-dependent helicase	NA	A0A2I7R5Z1	Vibrio_phage	30.6	8.2e-46
WP_013060300.1|399980_401690_+	TraI domain-containing protein	NA	NA	NA	NA	NA
401416:401430	attL	CTGGTTTTATTTTTA	NA	NA	NA	NA
WP_013060301.1|401757_402771_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_002209117.1|403185_403761_-	transcriptional regulator	NA	NA	NA	NA	NA
WP_002209118.1|404180_406196_+	formate-dependent uric acid utilization protein AegA	NA	NA	NA	NA	NA
WP_002209119.1|406218_406776_+	4Fe-4S binding protein	NA	NA	NA	NA	NA
WP_002209120.1|406798_408946_+	formate dehydrogenase subunit alpha	NA	NA	NA	NA	NA
WP_002209121.1|409007_410795_-	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
WP_002209122.1|410770_411130_-	divalent cation tolerance protein CutA	NA	NA	NA	NA	NA
WP_002209123.1|411314_412616_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
WP_002209124.1|412735_414172_-	aspartate ammonia-lyase	NA	NA	NA	NA	NA
WP_002209126.1|414619_415198_+	membrane protein FxsA	NA	NA	NA	NA	NA
WP_002209127.1|415452_415746_+	co-chaperone GroES	NA	A0A221S322	uncultured_virus	36.8	3.3e-10
WP_002209128.1|415792_417439_+	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	66.9	1.6e-183
WP_002209129.1|418062_418461_+	DUF4156 domain-containing protein	NA	NA	NA	NA	NA
WP_002228125.1|418745_419774_-	EF-P beta-lysylation protein EpmB	NA	NA	NA	NA	NA
WP_002209131.1|419809_420376_+	elongation factor P	NA	NA	NA	NA	NA
WP_002228124.1|420622_420937_+	quaternary ammonium compound efflux SMR transporter SugE	NA	NA	NA	NA	NA
WP_002209134.1|421101_421458_-	fumarate reductase subunit FrdD	NA	NA	NA	NA	NA
WP_002209135.1|421474_421867_-	fumarate reductase subunit FrdC	NA	NA	NA	NA	NA
WP_002209136.1|421883_422618_-	succinate dehydrogenase/fumarate reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_002209137.1|422610_424434_-	fumarate reductase (quinol) flavoprotein subunit	NA	A0A2P0ZL82	Lactobacillus_phage	27.6	1.0e-16
WP_002209138.1|424540_424732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002209139.1|424891_425869_+	elongation factor P--(R)-beta-lysine ligase	NA	NA	NA	NA	NA
WP_002209140.1|425989_429331_-	miniconductance mechanosensitive channel MscM	NA	NA	NA	NA	NA
WP_002209141.1|429372_430254_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_002209142.1|430578_431631_-	small ribosomal subunit biogenesis GTPase RsgA	NA	NA	NA	NA	NA
WP_002209143.1|431830_432376_+	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	40.1	3.8e-28
WP_002209144.1|433320_434556_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_002209145.1|434554_436069_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_002209146.1|436079_436550_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_002232017.1|436557_438471_+	N-acetylmuramoyl-L-alanine amidase AmiB	NA	M1HNA7	Bacillus_virus	28.2	2.1e-28
WP_002209148.1|438486_440394_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	41.3	4.3e-58
WP_002209149.1|440386_441328_+|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
WP_002209151.1|441443_441749_+	RNA chaperone Hfq	NA	NA	NA	NA	NA
WP_002209152.1|441847_443134_+	GTPase HflX	NA	NA	NA	NA	NA
WP_002209154.1|443374_444634_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_002209155.1|444637_445642_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_002217227.1|445813_446014_+	DUF2065 domain-containing protein	NA	NA	NA	NA	NA
WP_002209157.1|446113_447412_+	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	35.4	1.3e-66
WP_002217229.1|447780_448206_+	nitric oxide-sensing transcriptional repressor NsrR	NA	NA	NA	NA	NA
WP_002209159.1|448446_450981_+	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	33.3	2.5e-66
WP_002209161.1|451099_451840_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_002353634.1|452259_453891_+	isovaleryl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_002215294.1|453962_454274_-	biofilm peroxide resistance protein BsmA	NA	NA	NA	NA	NA
WP_002228674.1|454458_454563_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001297096.1|454613_455393_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|455392_456415_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002209166.1|456548_458612_+	McrB family protein	NA	K4I1H4	Acidithiobacillus_phage	33.2	5.3e-30
WP_002209167.1|458608_459925_+	McrC family protein	NA	NA	NA	NA	NA
WP_002209169.1|460948_462274_+	site-specific DNA-methyltransferase	NA	NA	NA	NA	NA
WP_002209170.1|462323_463046_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_002209171.1|463017_464391_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071525507.1|464734_465073_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
470830:470844	attR	CTGGTTTTATTTTTA	NA	NA	NA	NA
>prophage 2
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	558228	604700	4553586	tRNA,plate,transposase	Bodo_saltans_virus(20.0%)	40	NA	NA
WP_002210509.1|558228_561045_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A2H4UVG0	Bodo_saltans_virus	26.1	1.0e-63
WP_002210508.1|561044_561554_+	signal peptidase II	NA	NA	NA	NA	NA
WP_002228112.1|561621_562080_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_002210506.1|562060_563014_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA	NA
WP_002213775.1|563395_563854_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002210504.1|564306_565128_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_002224759.1|565600_566776_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	34.3	6.9e-51
WP_002210502.1|566791_570025_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_002210501.1|570252_570867_-	LysE family translocator	NA	NA	NA	NA	NA
WP_002210499.1|571190_571991_+	threonine/serine exporter ThrE family protein	NA	NA	NA	NA	NA
WP_002210498.1|571987_572443_+	threonine/serine exporter	NA	NA	NA	NA	NA
WP_002210497.1|572592_573075_+	type 3 dihydrofolate reductase	NA	A0A219UQN5	Bacillus_phage	42.6	4.7e-30
WP_002213759.1|573286_573745_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_071525509.1|574186_574501_+	DUF3757 domain-containing protein	NA	NA	NA	NA	NA
WP_002210493.1|574627_575092_+	DUF3757 domain-containing protein	NA	NA	NA	NA	NA
WP_002210492.1|575181_576051_-	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) ApaH	NA	NA	NA	NA	NA
WP_002210491.1|576067_576445_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
WP_002210490.1|576458_577277_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA	NA
WP_002210489.1|577269_578265_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
WP_002210488.1|578248_579553_-	peptidylprolyl isomerase SurA	NA	NA	NA	NA	NA
WP_002228111.1|579620_581963_-	LPS assembly protein LptD	NA	NA	NA	NA	NA
WP_002210486.1|582147_582981_+	co-chaperone DjlA	NA	NA	NA	NA	NA
WP_002210485.1|583278_583899_-|tRNA	bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA	tRNA	NA	NA	NA	NA
WP_002214747.1|585121_585865_-	DUF2285 domain-containing protein	NA	NA	NA	NA	NA
WP_002210482.1|586194_587208_+	ImpA family type VI secretion system protein	NA	NA	NA	NA	NA
WP_002210481.1|587218_587779_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_002210480.1|587787_589290_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_002210479.1|589452_589971_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_002210478.1|590044_590488_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_002210477.1|590520_592365_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_002210476.1|592357_593341_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002210475.1|593358_595947_+	type VI secretion system ATPase TssH	NA	A0A248SJW6	Salicola_phage	28.7	1.9e-77
WP_002210474.1|596050_598399_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.9	2.1e-14
WP_002228110.1|598411_598984_+	DUF2169 domain-containing protein	NA	NA	NA	NA	NA
WP_002228109.1|599008_600631_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002214739.1|600656_601760_+	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002210473.1|601752_602370_+	DUF3540 domain-containing protein	NA	NA	NA	NA	NA
WP_002214737.1|602375_602741_+	DUF4150 domain-containing protein	NA	NA	NA	NA	NA
WP_002210471.1|602733_603225_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002210470.1|603344_604700_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 3
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	625523	682145	4553586	holin,transposase	Escherichia_phage(50.0%)	53	NA	NA
WP_000255944.1|625523_626546_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002397472.1|626633_626885_+	sugar transporter	NA	NA	NA	NA	NA
WP_002210456.1|627125_627728_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_002210455.1|627742_629173_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_002210454.1|629174_630266_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_002210453.1|630268_631831_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_002213775.1|631977_632436_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002210452.1|632864_633080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002216434.1|633757_634714_+	transcriptional regulator LeuO	NA	NA	NA	NA	NA
WP_002216437.1|635250_637056_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.2	3.5e-38
WP_002228103.1|637515_639243_+	acetolactate synthase 3 large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.4	7.8e-59
WP_002210448.1|639245_639740_+	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_002213759.1|639938_640397_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002210447.1|640901_641912_+	catabolite repressor/activator	NA	NA	NA	NA	NA
WP_002210446.1|642042_642483_-	L-alanine exporter AlaE	NA	NA	NA	NA	NA
WP_087768171.1|642940_643030_+	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002210443.1|643604_644063_+	division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
WP_002210442.1|644065_645028_+	16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH	NA	NA	NA	NA	NA
WP_002210441.1|645024_645342_+	cell division protein FtsL	NA	NA	NA	NA	NA
WP_002210440.1|645407_647171_+	peptidoglycan glycosyltransferase FtsI	NA	NA	NA	NA	NA
WP_002210439.1|647157_648645_+	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_002210438.1|648641_650018_+	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
WP_002210437.1|650011_651094_+	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
WP_002210436.1|651096_652413_+	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
WP_002210435.1|652412_653615_+	cell division protein FtsW	NA	NA	NA	NA	NA
WP_002210434.1|653611_654682_+	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
WP_002216457.1|654819_656295_+	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
WP_002210432.1|656287_657208_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
WP_002228100.1|657209_658037_+	cell division protein FtsQ	NA	NA	NA	NA	NA
WP_002210431.1|658063_659320_+	cell division protein FtsA	NA	NA	NA	NA	NA
WP_002210430.1|659392_660544_+	cell division protein FtsZ	NA	NA	NA	NA	NA
WP_002228285.1|660643_661564_+	UDP-3-O-acyl-N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
WP_002210428.1|661730_662255_-	DUF721 domain-containing protein	NA	NA	NA	NA	NA
WP_002210427.1|662283_662817_+	secA regulator SecM	NA	NA	NA	NA	NA
WP_002210426.1|662894_665609_+	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
WP_002210424.1|665903_666290_+	8-oxo-dGTP diphosphatase MutT	NA	A0A0B5CYJ3	Rhizoctonia_fumigata_mycovirus	30.4	8.4e-06
WP_001297096.1|666551_667331_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|667330_668353_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002210421.1|668631_669027_-	DoxX family protein	NA	NA	NA	NA	NA
WP_002210420.1|669330_669615_-	YqjK-like family protein	NA	NA	NA	NA	NA
WP_002210419.1|669611_670007_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_002210418.1|670009_670315_-	DUF883 domain-containing protein	NA	NA	NA	NA	NA
WP_002210416.1|670469_670850_-	DUF1090 domain-containing protein	NA	NA	NA	NA	NA
WP_002210415.1|671075_671465_-	EnvZ/OmpR regulon moderator MzrA	NA	NA	NA	NA	NA
WP_002210414.1|671461_672160_-	DedA family protein	NA	NA	NA	NA	NA
WP_002218957.1|672437_672971_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002210412.1|673219_674014_-	transcriptional regulator ExuR	NA	NA	NA	NA	NA
WP_002353699.1|674276_675578_-	MFS transporter	NA	NA	NA	NA	NA
WP_002210410.1|676325_677735_+	glucuronate isomerase	NA	NA	NA	NA	NA
WP_002210409.1|677933_679385_+	tagaturonate reductase	NA	NA	NA	NA	NA
WP_002210408.1|679395_680886_+	altronate dehydratase	NA	NA	NA	NA	NA
WP_002210407.1|681038_681569_+	YgjV family protein	NA	NA	NA	NA	NA
WP_002213759.1|681686_682145_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
>prophage 4
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	1281544	1336687	4553586	protease,integrase,transposase	Escherichia_phage(33.33%)	56	1281476:1281535	1327257:1329213
1281476:1281535	attL	TATTGTCAACGACGGATGAAAAGTGATCCACTTATATCTCCACCAACGGCCCAATATTGA	NA	NA	NA	NA
WP_001297096.1|1281544_1282324_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|1282323_1283346_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002215951.1|1283950_1284268_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	48.1	2.0e-13
WP_002210705.1|1284273_1284588_+	putative addiction module antidote protein	NA	NA	NA	NA	NA
WP_002210707.1|1284936_1286025_-	AAA family ATPase	NA	A0A2H4JFA4	uncultured_Caudovirales_phage	60.4	1.4e-114
WP_002215950.1|1286021_1286981_-	toprim domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	41.0	1.6e-50
WP_002215949.1|1286973_1287516_-	ash family protein	NA	NA	NA	NA	NA
WP_002210709.1|1287515_1287716_-	AlpA family transcriptional regulator	NA	A0A1V0E8E5	Vibrio_phage	51.7	1.6e-08
WP_002210710.1|1287708_1288596_-|integrase	integrase domain-containing protein	integrase	NA	NA	NA	NA
WP_002215946.1|1289403_1289631_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002215945.1|1289792_1291463_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002210712.1|1291513_1292602_-	DUF4297 domain-containing protein	NA	NA	NA	NA	NA
WP_002210713.1|1292680_1293880_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B5FPC6	Escherichia_phage	50.2	2.2e-108
WP_002213759.1|1294103_1294562_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002210714.1|1295196_1295679_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	46.2	3.4e-28
WP_011055694.1|1295737_1296274_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
WP_002210716.1|1296266_1296551_+	RnfH family protein	NA	NA	NA	NA	NA
WP_002210717.1|1296700_1297042_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
WP_002210718.1|1297155_1298817_-	DNA repair protein RecN	NA	NA	NA	NA	NA
WP_002210719.1|1298903_1299785_-	NAD(+) kinase	NA	NA	NA	NA	NA
WP_002210720.1|1299908_1300487_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_002210721.1|1300594_1301875_-	citrate synthase	NA	NA	NA	NA	NA
WP_002210722.1|1302584_1302974_+	succinate dehydrogenase cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_002210723.1|1302967_1303315_+	succinate dehydrogenase membrane anchor subunit	NA	NA	NA	NA	NA
WP_002210724.1|1303315_1305082_+	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_002210725.1|1305131_1305848_+	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_002210726.1|1306203_1309011_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_002210727.1|1309040_1310264_+	2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_002210728.1|1310376_1311543_+	ADP-forming succinate--CoA ligase subunit beta	NA	NA	NA	NA	NA
WP_002210729.1|1311542_1312415_+	succinate--CoA ligase subunit alpha	NA	A0A2K9L1S3	Tupanvirus	34.7	3.6e-20
WP_002210730.1|1313181_1314750_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_002210731.1|1314764_1315904_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_002210732.1|1315916_1316051_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_011191945.1|1316040_1316328_+	cyd operon protein YbgE	NA	NA	NA	NA	NA
WP_002210734.1|1316459_1316861_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_002210735.1|1316860_1317547_+	Tol-Pal system protein TolQ	NA	NA	NA	NA	NA
WP_002210736.1|1317559_1317988_+	colicin uptake protein TolR	NA	NA	NA	NA	NA
WP_002210737.1|1318099_1319266_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
WP_002210738.1|1319385_1320678_+	Tol-Pal system protein TolB	NA	NA	NA	NA	NA
WP_002210739.1|1320728_1321235_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
WP_002210740.1|1321244_1322054_+	cell division protein CpoB	NA	NA	NA	NA	NA
WP_002210741.1|1322889_1323951_+	quinolinate synthase NadA	NA	NA	NA	NA	NA
WP_002210742.1|1324072_1324798_+	nicotinamide riboside transporter PnuC	NA	A0A2I7SAC7	Vibrio_phage	28.6	8.7e-20
WP_002210743.1|1324912_1325851_-	CDF family zinc transporter ZitB	NA	A0A1V0SED0	Indivirus	42.0	1.2e-10
WP_002210744.1|1326299_1327316_+	3-deoxy-7-phosphoheptulonate synthase AroG	NA	A0A0B6VT43	Edwardsiella_phage	46.8	2.8e-72
WP_001297096.1|1327325_1328105_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|1328104_1329127_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002210745.1|1329185_1329311_+	hypothetical protein	NA	NA	NA	NA	NA
1327257:1329213	attR	TATTGTCAACGACGGATGAAAAGTGATCCACTTATATCTCCACCAACGGCCCAATATTGATCCACCGTTTTACTCAGGATTAGCTTCTGCTATAACCCCGGCCTTTCGTTTCTGTCTGAGTCGATAGCTTTCTCCTTTGATTTGAACGACATGTGAGTGGTGTAAGATACGGTCCAGCATCGCTGAGGTCAGTGCTGCATCACCGGCGAACGTTTGATCCCACTGCCCGAACGGCAGATTGGATGTCAGGATCATTGCGCTCTTTTCGTAACGTTTAGCGATGACCTGGAAGAACAGCTTTGCTTCTTCCTGACTGAACGGCAGATAGCCTATTTCATCAATGATGAGCAGGCGGGGGGCCATTACTCCACGCTGAAGCGTCGTTTTATAACGGCCCTGACGTTGTGCCGTAGATAACTGAAGTAACAGATCTGCTGCTGTTGTGAAGCGAACTTTGATACCTGCACGGACTGCTTCATAGCCCATCGCTATTGCCAGATGGGTTTTCCCCACACCTGATGGCCCCAGTAATACGATATTTTCATTACGTTCTATGAAGCTGAGTGAGCGTAACGACTGGAGTTGCTTCTGCGGTGCTCCGGTGGCGAATGTGAAGTCATACTCTTCGAACGTTTTCACCGCCGGGAAGGCTGCCATTCGGGTATACATCGCCTGTTTACGTTGATGACGTGCCAGTTTTTCTTCATGAAGCAGATGCTCCAGGAAGTCCATATAACTCCATTCCTGGTCTACTGCCTGTTGTGACAGCGCAGGCGCTGCGCTTATAAGGCTTTCCAGTTGCAACTGCCCGGCGAGCGCCATCAGTCGTTGATGTTGCAGTTCCATCATCACGCCACTCCTCTGCAGAATGAGTCGTAGATGGAGAGTGGATGATGCAGGGGGTGTTTGTCGAAGTTCACCAGATTTTCATCAAGATGCACGTCATACTCTTTTTTCTCCGGAGGCAGTGCCAGCATGGACTGCTGCTCTTCGAGCCAGCGATCGCAGGGACGGGCCTGGATTGTTTCATGCTTTCGTTGGTTAGCGACATCGTGCAGCCAGCGCAGACCGTGGCGGTTGGCTGTTTCAACATCGACAGTGATCCCCATCGGGCGCAGGCGAGTCATTAGTGGGATGTAAAAACTGTTACGGGTGTACTGCACCATCCGTTCCACCTTACCTTTAGTCTGTGCCCTGAAGGGGCGACACAGTCGGGGAGAGAAGCCCATCTCCTTGCCGAACTGCCACAGCGAAGGATGGAACCGGTGCTGACCGGTCTGATATGCGTCACGTTGCAGAACCACAGTTTTCATATTGTCATACAACACTTCGCGCGGCACACCACCAAAGAAGCGGAACGCATTACGATGGCAGGTCTCCAGCGTGTCATAACGCATATTGTCAGTGAATTCGATGTACAGCATTCGGCTGTATCCGAGAACAGCAACGAACACGTGAAGCGGTGAGCGACCATTACGCATAGTGCCCCAGTCAACCTGCATCTGTCGTCCGGGTTCAGTTTCGAACCGAACGGCAGGCTCCTGCTCCTGAGGAACCGAGAGAGAACGAATGAATGCCCTGAGAATGGTCATTCCGCCACGATATCCCTGGTCTCTGATCTCGCGAGCGATTACCGTTGCCGGGATTTTGTAAGGATGAGCATCGGCGATGCGTTGACGAATATAATCCCGGTATTCATCCAGGAGTGAAGCAACAGCAGGTCGCGGCGTATATTTTGGCGGCTCAGATTTTGCCTGCAAATAACGTTTAACGGTATTGCGGGAGATCCCCAGTTCTCTGGCAATCGCCCGGCTACTCATTCCCTGCTTGTGCAGGATTTTAATTTCCATAACTGTCTCAAAAGTGACCATAAACTCTCCTGAATCAGGAGAGCAGATTACCCCCTGGATCTGATTTCAGGCGTTGGGTGTGGATCACTATTGCACCGTTCGTTACA	NA	NA	NA	NA
WP_002210746.1|1329492_1330245_-	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_002210747.1|1330591_1330927_-	phosphate starvation-inducible protein PsiF	NA	NA	NA	NA	NA
WP_002216812.1|1331219_1332116_-	galactose-1-epimerase	NA	NA	NA	NA	NA
WP_002216814.1|1332136_1332289_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002210748.1|1332282_1333434_-	galactokinase	NA	NA	NA	NA	NA
WP_002210749.1|1333430_1334483_-	galactose-1-phosphate uridylyltransferase	NA	NA	NA	NA	NA
WP_002210750.1|1334492_1335509_-	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	44.8	3.0e-79
WP_002210751.1|1335868_1336687_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 5
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	1359407	1395629	4553586	holin,tRNA,transposase	Catovirus(12.5%)	30	NA	NA
WP_002213775.1|1359407_1359866_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002220180.1|1360094_1361798_-|holin	choline dehydrogenase	holin	A0A1V0S9M4	Catovirus	31.5	9.4e-57
WP_002218281.1|1361820_1363293_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_002218278.1|1363350_1363947_-	transcriptional regulator BetI	NA	NA	NA	NA	NA
WP_002228035.1|1364311_1366360_+|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	28.5	1.4e-19
WP_002214199.1|1366591_1367485_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002214197.1|1367522_1368371_-	DMT family transporter	NA	NA	NA	NA	NA
WP_002214195.1|1368716_1369580_+	xanthosine phosphorylase	NA	Q5YBA4	Grouper_iridovirus	40.7	2.3e-51
WP_002213759.1|1370508_1370967_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002220173.1|1371772_1372246_-	zinc resistance sensor/chaperone ZraP	NA	NA	NA	NA	NA
WP_002220171.1|1372603_1374418_+	PAS domain-containing sensor histidine kinase	NA	W8CYF6	Bacillus_phage	28.4	1.0e-16
WP_002220170.1|1374404_1375769_+	sigma 54-interacting transcriptional regulator	NA	Q6XM27	Feldmannia_irregularis_virus	29.1	1.3e-05
WP_002220169.1|1376116_1377226_+	alkene reductase	NA	NA	NA	NA	NA
WP_002220168.1|1377226_1378138_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002220165.1|1378692_1378920_+	N5,N10-methylene tetrahydromethanopterin reductase	NA	NA	NA	NA	NA
WP_002220163.1|1378930_1379257_+	EthD family reductase	NA	NA	NA	NA	NA
WP_002220162.1|1379295_1380402_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002220159.1|1380414_1381590_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_002220158.1|1381594_1383337_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	34.6	6.3e-24
WP_002220156.1|1383350_1384337_-	secretion protein HlyD	NA	NA	NA	NA	NA
WP_002220154.1|1384388_1385099_-	transcriptional regulator CecR	NA	NA	NA	NA	NA
WP_002220152.1|1385489_1386845_+	ATP-dependent RNA helicase RhlE	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	35.6	4.1e-55
WP_011566265.1|1388058_1388259_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016256670.1|1388292_1388619_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002228617.1|1388759_1388996_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002223532.1|1389079_1389394_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002209743.1|1389568_1390777_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002213759.1|1392588_1393047_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002210776.1|1393461_1394391_+	DUF4097 domain-containing protein	NA	NA	NA	NA	NA
WP_002228612.1|1394690_1395629_+|tRNA	tRNA dihydrouridine(16) synthase DusC	tRNA	NA	NA	NA	NA
>prophage 6
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	1436217	1481576	4553586	tail,plate,transposase,protease,coat	Pseudomonas_phage(25.0%)	39	NA	NA
WP_002210815.1|1436217_1436727_-|protease	serine protease inhibitor ecotin	protease	NA	NA	NA	NA
WP_002210816.1|1436761_1437019_-	2Fe-2S ferredoxin-like protein	NA	G9IAA2	Pseudomonas_phage	54.9	4.0e-20
WP_002210817.1|1437022_1438153_-	ribonucleotide-diphosphate reductase subunit beta	NA	G9IAA3	Pseudomonas_phage	78.6	7.6e-172
WP_002210818.1|1438315_1440604_-	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	64.9	1.1e-286
WP_002210820.1|1441097_1441826_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_002210821.1|1442087_1444763_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	NA	G3M9Z5	Bacillus_virus	34.4	4.0e-102
WP_002228028.1|1444950_1447824_+	two-component system sensor histidine kinase RcsC	NA	A0A1V0SGX0	Hokovirus	28.3	3.8e-42
WP_002210824.1|1447891_1448545_-	transcriptional regulator RcsB	NA	NA	NA	NA	NA
WP_002216094.1|1448547_1449120_-	Hpt domain-containing protein	NA	NA	NA	NA	NA
WP_002216093.1|1449287_1451240_-	phosphotransferase RcsD	NA	NA	NA	NA	NA
WP_002210825.1|1451263_1452418_-	MFS transporter	NA	NA	NA	NA	NA
WP_002210826.1|1453520_1454636_+	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	57.6	9.6e-111
WP_002213759.1|1454837_1455296_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002228026.1|1456085_1457252_-	D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH	NA	NA	NA	NA	NA
WP_002208870.1|1457526_1459053_-	MFS transporter	NA	NA	NA	NA	NA
WP_002208869.1|1459429_1460458_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_002208868.1|1460531_1462319_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.5	4.0e-10
WP_002208867.1|1462740_1463676_-	omptin family outer membrane beta-barrel protein YcoA	NA	NA	NA	NA	NA
WP_002208866.1|1463847_1464090_-	DinI family protein	NA	K7PKR6	Enterobacteria_phage	65.0	6.9e-22
WP_002208864.1|1464295_1465018_-	LexA family transcriptional regulator	NA	F1C599	Cronobacter_phage	51.9	2.2e-63
WP_002215470.1|1465291_1465771_+	antitermination protein Q	NA	S5M7R9	Escherichia_phage	61.0	2.3e-37
WP_002208862.1|1465981_1467286_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	46.0	1.7e-90
WP_002208861.1|1467994_1468807_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_002208860.1|1468782_1469577_+	hydroxypyruvate isomerase family protein	NA	NA	NA	NA	NA
WP_002208859.1|1470207_1470498_+	hypothetical protein	NA	H6WRZ3	Salmonella_phage	46.3	7.7e-12
WP_002208858.1|1470543_1471161_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_002208857.1|1471165_1471360_+	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	60.4	3.5e-08
WP_002208856.1|1471356_1472865_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	B5TK67	Pseudomonas_phage	44.2	2.4e-104
WP_002208855.1|1472886_1473255_+|tail	phage tail tube protein	tail	NA	NA	NA	NA
WP_002208854.1|1473256_1473556_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_002208853.1|1473676_1475170_+|coat	coat protein	coat	NA	NA	NA	NA
WP_002208852.1|1475436_1476843_+	DNA circularization protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
WP_002208850.1|1476839_1477895_+|tail	tail protein	tail	M1PVV2	Vibrio_phage	27.2	1.3e-37
WP_002215460.1|1477910_1478507_+|plate	phage baseplate assembly protein	plate	NA	NA	NA	NA
WP_002208848.1|1478503_1478959_+	phage GP46 family protein	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
WP_002208847.1|1478962_1480099_+|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	30.5	4.5e-31
WP_002215458.1|1480095_1480356_+	DUF2313 domain-containing protein	NA	NA	NA	NA	NA
WP_002208846.1|1480352_1480700_+	DUF2313 domain-containing protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	41.3	6.4e-21
WP_002208845.1|1480796_1481576_+|tail	tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	52.4	7.1e-52
>prophage 7
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	1655123	1729361	4553586	plate,tRNA,protease,transposase	Streptococcus_phage(20.0%)	60	NA	NA
WP_002211311.1|1655123_1655909_+|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
WP_002211310.1|1655905_1657228_+	chromosome partition protein MukF	NA	NA	NA	NA	NA
WP_002211309.1|1657208_1657937_+	chromosome partition protein MukE	NA	NA	NA	NA	NA
WP_002211308.1|1657933_1662391_+	chromosome partition protein MukB	NA	NA	NA	NA	NA
WP_002213759.1|1662606_1663065_+|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002217987.1|1663348_1665205_+	L,D-transpeptidase	NA	NA	NA	NA	NA
WP_002211305.1|1665428_1665977_+	YcbK family protein	NA	A0A0K1LLY2	Rhodobacter_phage	34.7	7.8e-05
WP_002211304.1|1666037_1666685_+	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	32.3	2.2e-22
WP_002430096.1|1666838_1666955_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211303.1|1667108_1668299_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_002354007.1|1668555_1669635_-	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	56.5	3.2e-111
WP_002211301.1|1669935_1671336_-|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	35.2	6.5e-80
WP_002228013.1|1671834_1673040_-	nicotinate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_002220013.1|1673755_1676371_+	aminopeptidase N	NA	NA	NA	NA	NA
WP_002211296.1|1677024_1678035_+	quinone-dependent dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
WP_002211295.1|1678217_1678769_+	cell division protein ZapC	NA	NA	NA	NA	NA
WP_002211294.1|1678794_1679907_-	MOSC N-terminal beta barrel domain-containing protein	NA	NA	NA	NA	NA
WP_002211293.1|1680006_1682127_+	bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA	NA	NA	NA	NA
WP_002211292.1|1682132_1684046_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	28.9	1.5e-47
WP_002211291.1|1684174_1685461_+	membrane integrity-associated transporter subunit PqiA	NA	NA	NA	NA	NA
WP_002211290.1|1685447_1687100_+	intermembrane transport protein PqiB	NA	NA	NA	NA	NA
WP_002211289.1|1687096_1687675_+	membrane integrity-associated transporter subunit PqiC	NA	NA	NA	NA	NA
WP_002228015.1|1687944_1688112_+	ribosome modulation factor	NA	NA	NA	NA	NA
WP_002213775.1|1688309_1688768_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_001297096.1|1689928_1690708_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|1690707_1691730_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002211286.1|1692363_1692552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002220006.1|1692817_1693336_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_002224683.1|1693404_1695156_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_002226586.1|1695366_1695822_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_002213775.1|1695990_1696449_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002213066.1|1696638_1697700_-	porin OmpA	NA	NA	NA	NA	NA
WP_002213065.1|1698057_1698564_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_002213064.1|1698792_1699428_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_002213063.1|1699529_1701668_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_002213062.1|1701697_1702144_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_002221095.1|1702337_1704392_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	25.8	1.5e-16
WP_002213060.1|1704452_1704917_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_002213058.1|1705095_1705776_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_002213056.1|1706091_1706508_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_002213054.1|1706616_1706934_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_002213052.1|1706994_1708185_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	W6LLI2	Streptococcus_phage	28.1	2.1e-26
WP_002213049.1|1708278_1708557_+	acylphosphatase	NA	NA	NA	NA	NA
WP_002213046.1|1708608_1708938_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_002213039.1|1712583_1715001_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002213038.1|1715154_1715901_-	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.4	3.3e-14
WP_002213036.1|1716631_1716850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002213034.1|1717113_1717638_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
WP_002213032.1|1717627_1718911_+	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	NA	NA	NA	NA	NA
WP_002213030.1|1718912_1719650_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002213028.1|1719665_1720904_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_002213026.1|1720896_1721616_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_002213025.1|1721617_1722370_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_002213024.1|1722372_1723161_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002228570.1|1723247_1723688_+	lipocalin-like domain-containing protein	NA	NA	NA	NA	NA
WP_002213017.1|1723725_1723974_+	acyl carrier protein	NA	NA	NA	NA	NA
WP_002213016.1|1724072_1724921_+	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_002213014.1|1725909_1726410_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_002215896.1|1726452_1727997_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_002211664.1|1728008_1729361_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 8
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	1759220	1803738	4553586	lysis,tRNA,plate,transposase	Tupanvirus(14.29%)	36	NA	NA
WP_002211940.1|1759220_1760984_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_002211941.1|1760947_1762033_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002214552.1|1762007_1762589_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002211943.1|1762588_1763041_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_002211944.1|1763065_1764433_+	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_002211945.1|1764644_1765268_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002227996.1|1765950_1767546_+	ABC-F family ATPase	NA	A0A2K9L0W2	Tupanvirus	28.5	6.1e-58
WP_002211947.1|1767773_1768427_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002209743.1|1768470_1769679_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211948.1|1769814_1770585_-	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_002211949.1|1770586_1771861_-	molybdopterin molybdotransferase MoeA	NA	NA	NA	NA	NA
WP_002211950.1|1772395_1773706_-	darobactin maturation radical SAM/SPASM protein DarE	NA	NA	NA	NA	NA
WP_002211951.1|1773715_1774384_-	darobactin export ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	1.4e-35
WP_002211952.1|1774385_1775648_-	darobactin export ABC transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_002215886.1|1775649_1778010_-	darobactin export ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_002227980.1|1778093_1778306_-	peptide antibiotic darobactin C	NA	NA	NA	NA	NA
WP_002211956.1|1778562_1779405_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_002211957.1|1779425_1780565_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	29.9	5.2e-35
WP_002211958.1|1780838_1781708_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211959.1|1781843_1782995_+	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA	NA
WP_002211960.1|1783178_1783841_+	GTP cyclohydrolase I FolE	NA	R9TJA5	Vibrio_phage	53.5	5.8e-55
WP_002211961.1|1783895_1785062_+	DUF418 family protein	NA	NA	NA	NA	NA
WP_002211963.1|1785809_1786802_+	galactose/glucose ABC transporter substrate-binding protein MglB	NA	NA	NA	NA	NA
WP_002211964.1|1787031_1788552_+	galactose/methyl galactoside ABC transporter ATP-binding protein MglA	NA	F2Y2R6	Organic_Lake_phycodnavirus	29.9	2.6e-10
WP_002211965.1|1788572_1789583_+	galactose/methyl galactoside ABC transporter permease MglC	NA	NA	NA	NA	NA
WP_002211966.1|1790027_1790765_-	outer membrane permeability protein SanA	NA	NA	NA	NA	NA
WP_002211968.1|1791045_1792743_-	NAD-dependent malic enzyme	NA	NA	NA	NA	NA
WP_002211969.1|1793098_1793983_-	cytidine deaminase	NA	NA	NA	NA	NA
WP_002211970.1|1794308_1795004_-|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
WP_002211971.1|1795000_1795408_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
WP_002211973.1|1795649_1796831_-	MFS transporter	NA	NA	NA	NA	NA
WP_002211974.1|1797163_1798417_-	LVIVD repeat-containing protein	NA	NA	NA	NA	NA
WP_002211975.1|1798434_1799511_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002228565.1|1800208_1800871_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002213775.1|1801088_1801547_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002211870.1|1801710_1803738_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.1	8.0e-55
>prophage 9
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	2161438	2261095	4553586	lysis,holin,tail,tRNA,transposase,integrase	Escherichia_phage(15.09%)	104	2208790:2208820	2250514:2250544
WP_000255944.1|2161438_2162461_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|2162460_2163240_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002210659.1|2163608_2164199_-	thymidine kinase	NA	A0A1Z1LYD5	Serratia_phage	55.8	1.5e-54
WP_002210661.1|2164948_2165347_+	DNA-binding transcriptional regulator H-NS	NA	NA	NA	NA	NA
WP_002210664.1|2165781_2167128_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	38.3	1.9e-81
WP_002210665.1|2167434_2168451_-	two-component system response regulator RssB	NA	NA	NA	NA	NA
WP_002210666.1|2169784_2170249_+	YchJ family protein	NA	NA	NA	NA	NA
WP_002210667.1|2170332_2171202_+	formyltetrahydrofolate deformylase	NA	M4QRX9	Synechococcus_phage	37.3	5.5e-13
WP_002209743.1|2171164_2172373_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211665.1|2173244_2174105_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211667.1|2174914_2175721_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
WP_002211668.1|2175818_2176205_+	pyrimidine (deoxy)nucleoside triphosphate diphosphatase	NA	NA	NA	NA	NA
WP_002211669.1|2176217_2176508_-	DUF1496 domain-containing protein	NA	NA	NA	NA	NA
WP_002211670.1|2176504_2178430_-	DNA topoisomerase III	NA	A0A1X9I6W8	Streptococcus_phage	30.4	4.2e-37
WP_002211671.1|2178491_2179538_-	selenide, water dikinase SelD	NA	NA	NA	NA	NA
WP_002211673.1|2179762_2180314_-	NAD(P)H nitroreductase	NA	NA	NA	NA	NA
WP_002211674.1|2180476_2182327_+	signal peptide peptidase SppA	NA	NA	NA	NA	NA
WP_002211675.1|2182443_2183460_+	asparaginase	NA	NA	NA	NA	NA
WP_002211676.1|2183474_2184122_+	bifunctional nicotinamidase/pyrazinamidase	NA	A0A2K9L6K4	Tupanvirus	33.0	1.8e-21
WP_002217933.1|2184255_2184528_-	YeaC family protein	NA	NA	NA	NA	NA
WP_002211677.1|2184598_2185012_-	peptide-methionine (R)-S-oxide reductase MsrB	NA	NA	NA	NA	NA
WP_002224141.1|2185359_2186355_+	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_002211679.1|2186668_2187544_+	D-hexose-6-phosphate mutarotase	NA	NA	NA	NA	NA
WP_002430110.1|2187616_2188366_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_002211681.1|2188809_2190744_+	protein kinase YeaG	NA	NA	NA	NA	NA
WP_002216501.1|2190893_2192168_+	YeaH/YhbH family protein	NA	A0A140HLI1	Bacillus_phage	37.1	1.5e-11
WP_002211683.1|2192275_2193394_+	DMT family transporter	NA	NA	NA	NA	NA
WP_002211684.1|2193428_2194334_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002211685.1|2194531_2195401_+	pirin family protein	NA	NA	NA	NA	NA
WP_002216508.1|2195665_2196868_+	multidrug effflux MFS transporter	NA	S4TR35	Salmonella_phage	29.1	7.6e-29
WP_002211686.1|2196883_2198188_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
WP_002211687.1|2198652_2200188_+	SpoVR family protein	NA	NA	NA	NA	NA
WP_002211688.1|2200405_2201125_-	fatty acid metabolism transcriptional regulator FadR	NA	NA	NA	NA	NA
WP_002211689.1|2201368_2202943_+	sodium/proton antiporter NhaB	NA	NA	NA	NA	NA
WP_002227934.1|2203178_2203709_+	disulfide bond formation protein DsbB	NA	NA	NA	NA	NA
WP_002214494.1|2204125_2204482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211692.1|2205573_2206314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211693.1|2206330_2207530_+	cysteine desulfurase	NA	A0A1X7QGF3	Faustovirus	29.6	2.4e-38
WP_002214492.1|2207533_2208706_+	MFS transporter	NA	NA	NA	NA	NA
2208790:2208820	attL	GTTATTTAGCCCAACTCGGCTTATTCAATAT	NA	NA	NA	NA
WP_002209743.1|2209010_2210219_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211695.1|2210439_2210859_-|tail	tail fiber assembly protein	tail	B6SCW7	Bacteriophage	42.0	5.7e-08
WP_002211696.1|2210869_2211787_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211697.1|2211803_2212802_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211698.1|2212801_2216005_-	host specificity protein J	NA	F1C571	Cronobacter_phage	60.5	0.0e+00
WP_002359202.1|2216180_2216402_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211699.1|2216370_2216535_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211700.1|2216576_2217197_-|tail	tail assembly protein	tail	K7PGY0	Enterobacteria_phage	57.0	3.2e-55
WP_002211701.1|2217252_2217468_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002214482.1|2217610_2218162_-	zinc ribbon domain-containing protein	NA	S4TR42	Salmonella_phage	58.0	9.5e-27
WP_002211704.1|2218260_2219268_-	Bro-N domain-containing protein	NA	A0A2H4J0P1	uncultured_Caudovirales_phage	33.0	4.1e-36
WP_002211705.1|2219341_2219509_-	hypothetical protein	NA	G9L6D7	Escherichia_phage	61.8	5.2e-13
WP_002211706.1|2219632_2220064_+	Arc family DNA-binding protein	NA	G9L6D6	Escherichia_phage	58.4	2.5e-30
WP_002211707.1|2220142_2220775_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002211708.1|2221035_2221746_-	C40 family peptidase	NA	K7P6F5	Enterobacteria_phage	76.8	1.3e-108
WP_002211709.1|2221748_2222501_-|tail	phage minor tail protein L	tail	A0A1W6JNX9	Morganella_phage	67.7	9.4e-102
WP_002213759.1|2222621_2223080_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002211710.1|2223384_2223726_-|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	50.0	1.7e-21
WP_002211711.1|2223728_2227232_-|tail	phage tail tape measure protein	tail	K7PMB9	Enterobacterial_phage	33.2	5.2e-118
WP_071525538.1|2227232_2227493_-	DUF1799 domain-containing protein	NA	A0A0S2SY90	Pseudomonas_phage	50.0	3.7e-13
WP_002211712.1|2227540_2227852_-	hypothetical protein	NA	I6PDG2	Cronobacter_phage	58.3	1.4e-30
WP_002211713.1|2227864_2228785_-	Ig-like domain-containing protein	NA	I6PBN6	Cronobacter_phage	49.1	4.4e-61
WP_002211714.1|2228850_2229258_-	DUF4128 domain-containing protein	NA	NA	NA	NA	NA
WP_002211715.1|2229254_2229839_-	hypothetical protein	NA	G8C7Q1	Escherichia_phage	52.1	3.6e-48
WP_002211716.1|2229840_2230191_-	hypothetical protein	NA	I6PD77	Cronobacter_phage	56.0	6.9e-31
WP_002211717.1|2230192_2230447_-	hypothetical protein	NA	J9Q7U0	Salmonella_phage	53.1	2.2e-18
WP_002211718.1|2230443_2230926_-	hypothetical protein	NA	G8C7P9	Escherichia_phage	46.1	6.4e-27
WP_002211719.1|2230973_2232179_-	Ig-like domain-containing protein	NA	A0A1B0VMF8	Pseudomonas_phage	79.2	1.8e-142
WP_002211720.1|2232192_2232966_-	hypothetical protein	NA	A0A1B0VMG1	Pseudomonas_phage	62.3	2.8e-69
WP_002211721.1|2233087_2234200_-	hypothetical protein	NA	I6PD76	Cronobacter_phage	58.2	6.0e-121
WP_002228446.1|2234200_2234842_-	DUF4055 domain-containing protein	NA	A0A1B0VMH0	Pseudomonas_phage	54.1	3.8e-59
WP_002228445.1|2234860_2235589_-	hypothetical protein	NA	A0A1B0VMH0	Pseudomonas_phage	51.4	4.6e-61
WP_002211722.1|2235588_2236563_-	hypothetical protein	NA	A0A1W6JNY3	Morganella_phage	81.1	2.3e-153
WP_002209743.1|2236567_2237776_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002211723.1|2237823_2238408_-	hypothetical protein	NA	A0A0R6PHH0	Moraxella_phage	70.7	4.8e-69
WP_002211724.1|2238411_2238861_-	DUF2280 domain-containing protein	NA	I6S1P9	Salmonella_phage	72.9	1.0e-47
WP_002211725.1|2238891_2239527_-	hypothetical protein	NA	I6S676	Salmonella_phage	71.4	7.2e-87
WP_002211727.1|2239983_2240697_-	phage antirepressor KilAC domain-containing protein	NA	Q5MBW0	Stx1-converting_phage	60.2	7.6e-69
WP_002211729.1|2241242_2241701_-|lysis	lysis protein	lysis	A0A2H4JHL8	uncultured_Caudovirales_phage	45.3	4.9e-21
WP_002211730.1|2241685_2242198_-	lysozyme	NA	I6PBN2	Cronobacter_phage	61.6	9.7e-50
WP_002430108.1|2242228_2242426_-|holin	phage holin family protein	holin	B6SD15	Bacteriophage	64.4	4.9e-18
WP_002215644.1|2242671_2242947_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211731.1|2242943_2243153_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002393183.1|2243315_2243492_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211732.1|2243576_2244140_-	Bro-N domain-containing protein	NA	B6SD63	Bacteriophage	58.0	9.4e-30
WP_002215638.1|2244188_2244407_-	ash family protein	NA	NA	NA	NA	NA
WP_002215636.1|2244410_2244800_-	antitermination protein	NA	A0A1W6JNX1	Morganella_phage	68.8	1.4e-45
WP_002211735.1|2244800_2245406_-	recombination protein NinG	NA	A0A1P8DTE0	Proteus_phage	56.9	2.8e-56
WP_002211736.1|2245479_2245926_-	recombination protein NinB	NA	A0A2H4J8D9	uncultured_Caudovirales_phage	62.5	3.9e-47
WP_002215632.1|2246950_2247211_+	excisionase family protein	NA	Q859D3	Escherichia_coli_phage	42.9	1.7e-10
WP_001297096.1|2247378_2248158_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|2248157_2249180_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002211738.1|2249249_2250488_+|integrase	site-specific integrase	integrase	Q20GI2	Phage_258-320	53.3	2.3e-121
WP_002211739.1|2250514_2250961_-	YcgN family cysteine cluster protein	NA	NA	NA	NA	NA
2250514:2250544	attR	GTTATTTAGCCCAACTCGGCTTATTCAATAT	NA	NA	NA	NA
WP_002211740.1|2251063_2251720_-	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_002215627.1|2251790_2252876_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
WP_002211743.1|2253016_2253289_-	YcgL domain-containing protein	NA	NA	NA	NA	NA
WP_002220631.1|2254009_2254696_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_002211179.1|2254720_2255533_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_002211180.1|2255536_2255806_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_002211181.1|2256042_2257164_-	ribonuclease D	NA	NA	NA	NA	NA
WP_002211182.1|2257323_2259012_-	long-chain-fatty-acid--CoA ligase FadD	NA	A0A2H4PQM9	Staphylococcus_phage	28.9	1.8e-31
WP_087768167.1|2259546_2259654_+	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002211183.1|2259654_2260260_-	Slp family lipoprotein	NA	NA	NA	NA	NA
WP_002211184.1|2260396_2261095_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
>prophage 10
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	2532347	2571432	4553586	protease,coat,transposase	Escherichia_phage(14.29%)	31	NA	NA
WP_000255944.1|2532347_2533370_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002209743.1|2534745_2535954_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002210828.1|2536001_2536352_-	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002210829.1|2536687_2537524_+	5-dehydro-4-deoxy-D-glucuronate isomerase	NA	NA	NA	NA	NA
WP_002210830.1|2537615_2538377_+	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.9	3.1e-20
WP_002210831.1|2538712_2540380_+	pectate disaccharide-lyase	NA	NA	NA	NA	NA
WP_002210832.1|2540420_2541311_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002210833.1|2541303_2542224_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002210834.1|2542237_2543365_+	ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	26.5	1.6e-12
WP_002210835.1|2543380_2544673_+	carbohydrate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002210836.1|2544970_2545681_+	porin	NA	NA	NA	NA	NA
WP_002210837.1|2546160_2546709_+	metal-dependent hydrolase	NA	A0A127AVX7	Bacillus_phage	32.9	4.0e-09
WP_002210838.1|2546912_2548304_+	L-cystine transporter	NA	NA	NA	NA	NA
WP_002210839.1|2548518_2549370_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	28.8	1.3e-11
WP_002210840.1|2549754_2550546_-	DNA-binding transcriptional regulator KdgR	NA	NA	NA	NA	NA
WP_002210841.1|2550732_2551899_-	oligogalacturonate lyase	NA	NA	NA	NA	NA
WP_002210842.1|2552225_2553593_+	MFS transporter	NA	NA	NA	NA	NA
WP_002210843.1|2553646_2554450_-	molecular chaperone	NA	NA	NA	NA	NA
WP_002215120.1|2554446_2555610_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002210844.1|2555606_2558219_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002215118.1|2558300_2559080_-	fimbrial chaperone	NA	NA	NA	NA	NA
WP_002210846.1|2559232_2559775_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002210847.1|2560432_2561314_-|protease	protease HtpX	protease	NA	NA	NA	NA
WP_002210848.1|2561787_2563860_-	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	34.8	4.0e-86
WP_002210849.1|2563879_2564593_-	RNA chaperone ProQ	NA	NA	NA	NA	NA
WP_002210850.1|2564688_2565186_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002367629.1|2565417_2566665_+	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA	NA
WP_002216616.1|2566633_2569285_+	PqiB family protein	NA	NA	NA	NA	NA
WP_002210852.1|2569763_2570318_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002216613.1|2570323_2570854_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002216611.1|2570874_2571432_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
>prophage 11
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	2643328	2699140	4553586	tRNA,transposase	uncultured_virus(30.0%)	53	NA	NA
WP_002210913.1|2643328_2644444_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_002210914.1|2644501_2645128_+	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_002210915.1|2645188_2646559_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	45.8	2.0e-110
WP_002210916.1|2646746_2647370_+	porin family protein	NA	NA	NA	NA	NA
WP_002210917.1|2647580_2648252_+	two-component system response regulator PhoP	NA	NA	NA	NA	NA
WP_002210918.1|2648257_2649712_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
WP_002210919.1|2649795_2650917_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_002210920.1|2651149_2652385_-	peptidase T	NA	NA	NA	NA	NA
WP_002210921.1|2652714_2653551_-	NAD-dependent protein deacylase	NA	A0A2I7S9Y2	Vibrio_phage	34.0	2.6e-20
WP_002216178.1|2653599_2653752_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002216175.1|2653744_2654515_-	N-acetylglucosamine kinase	NA	NA	NA	NA	NA
WP_002210922.1|2654533_2655781_-	lipoprotein-releasing ABC transporter permease subunit LolE	NA	NA	NA	NA	NA
WP_002210923.1|2655780_2656485_-	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	43.3	1.4e-35
WP_002222341.1|2656477_2657680_-	lipoprotein-releasing ABC transporter permease subunit LolC	NA	NA	NA	NA	NA
WP_002210924.1|2657949_2661396_+	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_002210925.1|2661634_2662174_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_002209743.1|2662503_2663712_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002213101.1|2663807_2664221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002215856.1|2664228_2664798_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213097.1|2665335_2666640_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002213095.1|2667014_2667557_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_002215854.1|2667684_2668704_-	beta-N-acetylhexosaminidase	NA	NA	NA	NA	NA
WP_002213090.1|2668786_2669653_-	thiamine kinase	NA	NA	NA	NA	NA
WP_002213089.1|2669633_2670209_-	penicillin-binding protein activator LpoB	NA	NA	NA	NA	NA
WP_002213088.1|2670249_2670639_-	YcfL family protein	NA	NA	NA	NA	NA
WP_002213087.1|2670673_2671027_-	purine nucleoside phosphoramidase	NA	NA	NA	NA	NA
WP_002215853.1|2671200_2672019_-	shikimate 5-dehydrogenase	NA	NA	NA	NA	NA
WP_002213759.1|2672461_2672920_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002213085.1|2673109_2674543_-	PTS glucose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_002213084.1|2674848_2675658_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_002213083.1|2675672_2676695_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
WP_002213082.1|2676694_2677333_-	dTMP kinase	NA	Q2Z0N0	Pseudomonas_phage	36.1	4.6e-25
WP_002217396.1|2677322_2678348_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
WP_002213080.1|2678636_2679443_-	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
WP_002213775.1|2679858_2680317_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002213079.1|2680516_2681758_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_002220787.1|2681852_2682089_-	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	45.6	7.7e-10
WP_002210935.1|2682242_2682977_-	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	33.1	7.7e-16
WP_002210934.1|2682990_2683920_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_002210933.1|2683957_2684908_-	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_002210932.1|2684914_2685949_-	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
WP_002210931.1|2685982_2686150_-	50S ribosomal protein L32	NA	NA	NA	NA	NA
WP_002210930.1|2686162_2686687_-	23S rRNA accumulation protein YceD	NA	NA	NA	NA	NA
WP_002210928.1|2686828_2687425_+	septum formation inhibitor Maf	NA	NA	NA	NA	NA
WP_002213759.1|2687579_2688038_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	NA	NA	NA	NA
WP_002210927.1|2688257_2689220_-	23S rRNA pseudouridine(955/2504/2580) synthase RluC	NA	NA	NA	NA	NA
WP_002354074.1|2689803_2693460_+	ribonuclease E	NA	NA	NA	NA	NA
WP_002209743.1|2693555_2694764_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002213107.1|2695040_2695328_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
WP_002213109.1|2695562_2696609_+	dihydroorotase	NA	NA	NA	NA	NA
WP_002213110.1|2696921_2697167_+	DNA damage-inducible protein I	NA	K7PM44	Enterobacteria_phage	51.3	2.6e-13
WP_002217041.1|2697672_2697969_+	biofilm formation regulator BssS	NA	NA	NA	NA	NA
WP_002209743.1|2697931_2699140_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
>prophage 12
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	3280127	3349877	4553586	tRNA,plate,transposase	Escherichia_phage(25.0%)	59	NA	NA
WP_002209727.1|3280127_3281009_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_002209726.1|3281008_3282019_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_002209725.1|3282188_3283316_-	4-phosphoerythronate dehydrogenase PdxB	NA	A0A285PXZ1	Cedratvirus	27.9	6.1e-20
WP_002209724.1|3283362_3284148_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002209722.1|3284373_3285291_+	DMT family transporter	NA	NA	NA	NA	NA
WP_002209721.1|3285575_3286613_+	flagella biosynthesis regulator Flk	NA	NA	NA	NA	NA
WP_002209720.1|3286954_3287485_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002209718.1|3288275_3288968_+	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
WP_002209717.1|3289375_3290599_-	beta-ketoacyl-ACP synthase I	NA	NA	NA	NA	NA
WP_002209716.1|3290770_3292840_+|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
WP_002209715.1|3293017_3293296_-	YfcL family protein	NA	NA	NA	NA	NA
WP_002209714.1|3293353_3293896_-	elongation factor P hydroxylase	NA	NA	NA	NA	NA
WP_002209713.1|3293995_3294802_-	TSUP family transporter	NA	NA	NA	NA	NA
WP_002225365.1|3294805_3295633_-	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
WP_002209711.1|3295638_3296724_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	47.4	2.7e-89
WP_002209710.1|3296800_3297733_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_002227846.1|3298102_3298633_+	endonuclease SmrB	NA	NA	NA	NA	NA
WP_002209707.1|3299010_3299502_-	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
WP_002209705.1|3300070_3302395_-	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA	NA
WP_002209704.1|3302394_3303705_-	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
WP_002227845.1|3303991_3304288_-	YfcZ/YiiS family protein	NA	NA	NA	NA	NA
WP_002209702.1|3304701_3305967_+	long-chain fatty acid transporter FadL	NA	NA	NA	NA	NA
WP_002209701.1|3306073_3306838_-	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
WP_002209700.1|3306873_3308100_-	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA	NA
WP_002214855.1|3308099_3308612_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_002209699.1|3308608_3309175_-	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_002209698.1|3309171_3311142_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
WP_002209697.1|3311138_3311633_-	cytochrome c maturation protein CcmE	NA	NA	NA	NA	NA
WP_002209696.1|3311629_3311932_-	heme exporter protein CcmD	NA	NA	NA	NA	NA
WP_002209695.1|3311928_3312666_-	heme ABC transporter permease	NA	NA	NA	NA	NA
WP_002209694.1|3312728_3313388_-	heme exporter protein CcmB	NA	NA	NA	NA	NA
WP_002209693.1|3313357_3314014_-	cytochrome c biogenesis heme-transporting ATPase CcmA	NA	A0A1V0SE00	Indivirus	24.7	4.8e-09
WP_002209692.1|3314458_3314926_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002209691.1|3315541_3316084_+	LemA family protein	NA	NA	NA	NA	NA
WP_002209690.1|3316088_3318128_+	DUF2207 domain-containing protein	NA	NA	NA	NA	NA
WP_002209688.1|3318503_3318845_+	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_002209687.1|3318919_3319267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002209686.1|3319291_3319771_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_002209685.1|3319867_3320674_-	ImpE family protein	NA	NA	NA	NA	NA
WP_002354537.1|3320693_3321536_-	TagK domain-containing protein	NA	NA	NA	NA	NA
WP_002209684.1|3321541_3321802_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_013060340.1|3321900_3324507_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	23.1	3.3e-29
WP_002214843.1|3324833_3328661_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_001297096.1|3329521_3330301_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_000255944.1|3330300_3331323_-|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_002211571.1|3332001_3333351_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_002211572.1|3333354_3333894_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002211573.1|3334167_3334653_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_002211574.1|3334978_3336481_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_002211575.1|3336504_3337029_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_002211576.1|3337133_3337742_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002211577.1|3337726_3338917_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002209743.1|3338941_3340150_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
WP_002215157.1|3340171_3341722_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_002211579.1|3341849_3342611_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA	NA
WP_002211580.1|3342767_3343313_-	type 1 fimbrial protein	NA	NA	NA	NA	NA
WP_002215317.1|3343513_3346189_-	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	32.3	1.0e-81
WP_002211582.1|3346971_3348852_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_002211583.1|3348851_3349877_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 13
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	3887061	3958033	4553586	plate,tRNA,integrase,transposase	Bacillus_virus(18.75%)	60	3878379:3878395	3906491:3906507
3878379:3878395	attL	TTGTTGATAAAAAAACC	NA	NA	NA	NA
WP_002213775.1|3887061_3887520_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_000255944.1|3887630_3888653_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|3888652_3889432_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002209315.1|3889482_3890592_-	ATP-binding protein	NA	A0A2H4J2R8	uncultured_Caudovirales_phage	67.9	1.5e-143
WP_002209314.1|3890584_3892495_-	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_002209313.1|3892648_3893908_-|integrase	integrase arm-type DNA-binding domain-containing protein	integrase	B7SYF8	Stenotrophomonas_phage	42.7	4.8e-82
WP_002223173.1|3894295_3895372_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_002209311.1|3895371_3896466_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_002209310.1|3896745_3898257_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.7	5.4e-48
WP_002209309.1|3898407_3898857_+	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_002209307.1|3898869_3901767_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	36.7	1.2e-141
WP_002223170.1|3901909_3902413_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002209303.1|3902919_3903351_-	ribonuclease E inhibitor RraB	NA	NA	NA	NA	NA
WP_002209302.1|3903562_3904570_+	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_002209301.1|3904876_3905335_-	YhcH/YjgK/YiaL family protein	NA	NA	NA	NA	NA
WP_002209300.1|3907636_3908686_+	ABC transporter permease	NA	NA	NA	NA	NA
3906491:3906507	attR	TTGTTGATAAAAAAACC	NA	NA	NA	NA
WP_002209299.1|3908704_3909541_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_002209298.1|3909533_3910412_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.9	7.5e-10
WP_002209297.1|3910398_3911115_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.9	2.7e-21
WP_002209296.1|3911548_3913687_+	anaerobic ribonucleoside-triphosphate reductase	NA	A0A2I7QNQ7	Vibrio_phage	65.3	1.5e-269
WP_025470743.1|3913863_3914328_+	anaerobic ribonucleoside-triphosphate reductase-activating protein	NA	K4F9T1	Cronobacter_phage	58.5	9.4e-52
WP_002209293.1|3914655_3915381_+	phosphonate metabolism transcriptional regulator PhnF	NA	NA	NA	NA	NA
WP_002209292.1|3915381_3915858_+	phosphonate C-P lyase system protein PhnG	NA	NA	NA	NA	NA
WP_002209291.1|3915857_3916484_+	phosphonate C-P lyase system protein PhnH	NA	NA	NA	NA	NA
WP_002209290.1|3916483_3917662_+	carbon-phosphorus lyase complex subunit PhnI	NA	NA	NA	NA	NA
WP_002209289.1|3917654_3918536_+	alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase PhnJ	NA	NA	NA	NA	NA
WP_002209288.1|3918535_3919327_+	phosphonate C-P lyase system protein PhnK	NA	G3M9Y6	Bacillus_virus	27.7	7.0e-15
WP_002209287.1|3919715_3920435_+	phosphonate C-P lyase system protein PhnL	NA	G9BWD6	Planktothrix_phage	34.9	5.0e-20
WP_002209286.1|3920431_3921568_+	alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase	NA	NA	NA	NA	NA
WP_002209285.1|3921567_3922149_+	ribose 1,5-bisphosphokinase	NA	NA	NA	NA	NA
WP_002209284.1|3922139_3922892_+	phosphonate metabolism protein PhnP	NA	NA	NA	NA	NA
WP_002209283.1|3922904_3923543_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002209282.1|3923694_3924138_-	YhbP family protein	NA	NA	NA	NA	NA
WP_002209281.1|3924236_3925403_-	alginate lyase family protein	NA	NA	NA	NA	NA
WP_002209280.1|3925417_3926512_-	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G3M9Y6	Bacillus_virus	32.0	2.1e-25
WP_002209279.1|3926523_3927363_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
WP_002209278.1|3927381_3928266_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
WP_002209277.1|3928273_3929587_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002209276.1|3930147_3931371_+	alginate lyase family protein	NA	NA	NA	NA	NA
WP_002209275.1|3931394_3933413_+	heparinase II/III family protein	NA	NA	NA	NA	NA
WP_002209274.1|3933643_3933931_+	GIY-YIG nuclease family protein	NA	F2NZ06	Diadromus_pulchellus_ascovirus	54.1	9.6e-15
WP_002209273.1|3934105_3934612_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_002209272.1|3934605_3935127_-	SCP2 domain-containing protein	NA	NA	NA	NA	NA
WP_002209270.1|3935442_3936438_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_002209269.1|3936449_3937328_+	U32 family peptidase	NA	NA	NA	NA	NA
WP_002209268.1|3937468_3938875_-	TolC family protein	NA	NA	NA	NA	NA
WP_002209267.1|3938876_3942002_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_002209266.1|3942005_3943166_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_002214817.1|3943673_3944729_+	LLM class flavin-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_002209263.1|3944983_3945295_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002214818.1|3945318_3945687_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002209261.1|3945922_3947917_-	DEAD/DEAH family ATP-dependent RNA helicase	NA	A0A0N9Q9J4	Chrysochromulina_ericina_virus	31.3	1.6e-52
WP_096335046.1|3947906_3947987_-	protein YrbN	NA	NA	NA	NA	NA
WP_002209260.1|3948103_3948988_-	lipoprotein NlpI	NA	NA	NA	NA	NA
WP_002209259.1|3949112_3951230_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_100067904.1|3951496_3952851_-|transposase	IS3-like element IS1661 family transposase	transposase	A0A1B1P773	Bacillus_phage	44.7	1.1e-55
WP_002213885.1|3953608_3954697_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_002212103.1|3954822_3956139_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_002212104.1|3956138_3956684_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002212105.1|3956686_3958033_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 14
NC_014029	Yersinia pestis Z176003, complete sequence	4553586	4048926	4111361	4553586	holin,transposase,protease	uncultured_Mediterranean_phage(18.18%)	56	NA	NA
WP_002210082.1|4048926_4050372_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
WP_002210083.1|4050574_4053433_-	RHS repeat protein	NA	NA	NA	NA	NA
WP_002210084.1|4053457_4056289_-	RHS repeat protein	NA	NA	NA	NA	NA
WP_002210086.1|4056489_4056849_-	DUF2570 domain-containing protein	NA	NA	NA	NA	NA
WP_002210087.1|4056845_4057247_-	M15 family metallopeptidase	NA	A0A249XWK9	Proteus_phage	61.0	3.6e-36
WP_002214300.1|4057259_4057562_-|holin	phage holin family protein	holin	NA	NA	NA	NA
WP_002210089.1|4057695_4062186_-	toxin	NA	NA	NA	NA	NA
WP_002229661.1|4062242_4064384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002229660.1|4064452_4065835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002210090.1|4065875_4068377_-	toxin	NA	NA	NA	NA	NA
WP_002214297.1|4068612_4069479_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002210092.1|4069739_4070651_-	HTH-type transcriptional activator AaeR	NA	NA	NA	NA	NA
WP_002210093.1|4070953_4071157_+	AaeX family protein	NA	NA	NA	NA	NA
WP_002210094.1|4071164_4072100_+	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
WP_002210095.1|4072101_4074057_+	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
WP_002214288.1|4075986_4076460_+	ribonuclease Ba	NA	NA	NA	NA	NA
WP_002210098.1|4076464_4076746_+	ribonuclease inhibitor	NA	NA	NA	NA	NA
WP_002210099.1|4076857_4077406_-	ribosome-associated protein	NA	NA	NA	NA	NA
WP_002210100.1|4077586_4078927_+|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_011055205.1|4079175_4079820_+	hypothetical protein	NA	A0A1B0VBK8	Salmonella_phage	49.0	3.4e-52
WP_002210102.1|4080027_4080414_+	cytochrome b562	NA	NA	NA	NA	NA
WP_002210103.1|4080645_4081056_-	nucleoside diphosphate kinase regulator	NA	NA	NA	NA	NA
WP_002210104.1|4081408_4083076_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
WP_002215779.1|4083170_4084586_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_002210106.1|4084996_4085950_-	HTH-type transcriptional regulator TreR	NA	NA	NA	NA	NA
WP_002210107.1|4086183_4086660_-	PliI family lysozyme inhibitor of I-type lysozyme	NA	NA	NA	NA	NA
WP_002210109.1|4086958_4087345_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA	NA
WP_002210110.1|4087482_4087947_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA	NA
WP_002210111.1|4087958_4088894_-	aspartate carbamoyltransferase	NA	M1HWF9	Paramecium_bursaria_Chlorella_virus	38.5	1.5e-48
WP_002210112.1|4089231_4089504_-	PTS phosphocarrier protein NPr	NA	NA	NA	NA	NA
WP_002210113.1|4089500_4090355_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	30.0	3.2e-05
WP_002213952.1|4090660_4091143_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
WP_002210115.1|4091571_4093005_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_002210116.1|4093066_4093792_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.4	1.4e-22
WP_002210117.1|4093798_4094344_-	lipopolysaccharide ABC transporter substrate-binding protein LptA	NA	NA	NA	NA	NA
WP_002218352.1|4094327_4094891_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_002228203.1|4094887_4095451_-	3-deoxy-manno-octulosonate-8-phosphatase KdsC	NA	A0A140XBD6	Dickeya_phage	83.0	9.6e-59
WP_002210119.1|4095699_4096686_-	arabinose-5-phosphate isomerase KdsD	NA	A0A2P0VNK5	Tetraselmis_virus	30.8	6.0e-40
WP_002210120.1|4096796_4097771_-	calcium/sodium antiporter	NA	NA	NA	NA	NA
WP_002210121.1|4098035_4098854_+	phospholipid ABC transporter ATP-binding protein MlaF	NA	G3M9Y6	Bacillus_virus	31.7	2.2e-19
WP_002210122.1|4099071_4099854_+	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA	NA
WP_002210123.1|4099858_4100416_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
WP_002210124.1|4100428_4101052_+	phospholipid-binding protein MlaC	NA	NA	NA	NA	NA
WP_002210125.1|4101087_4101390_+	lipid asymmetry maintenance protein MlaB	NA	NA	NA	NA	NA
WP_002210126.1|4101536_4101791_+	BolA family iron metabolism protein IbaG	NA	NA	NA	NA	NA
WP_002210127.1|4101944_4103207_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
WP_002210128.1|4103387_4104476_-	outer membrane-stress sensor serine endopeptidase DegS	NA	A0A1B1IRD3	uncultured_Mediterranean_phage	31.8	2.1e-09
WP_002213775.1|4104701_4105160_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	NA	NA	NA	NA
WP_002218066.1|4105276_4106650_-|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	28.2	7.4e-20
WP_002210130.1|4106920_4107325_-	DUF1043 family protein	NA	NA	NA	NA	NA
WP_002210131.1|4107548_4108676_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_002210132.1|4108989_4109418_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_002210133.1|4109432_4109825_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_002230558.1|4109821_4110019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002210135.1|4110198_4110840_+	stringent starvation protein A	NA	NA	NA	NA	NA
WP_002216203.1|4110845_4111361_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	55.6	3.6e-28
>prophage 1
NC_014017	Yersinia pestis Z176003 plasmid pCD1, complete sequence	68342	0	6365	68342		Yersinia_phage(100.0%)	8	NA	NA
WP_002213403.1|1054_1447_-	type III secretion system chaperone SycE/YerA	NA	NA	NA	NA	NA
WP_002229754.1|1640_2300_+	type III secretion system effector GTPase activator YopE	NA	NA	NA	NA	NA
WP_002213360.1|2439_2739_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_002224342.1|2731_2974_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
WP_002213357.1|3518_3692_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154020274.1|3840_4077_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213354.1|4236_5202_-	ParB/RepB/Spo0J family plasmid partition protein	NA	Q7Y3Y7	Yersinia_phage	56.6	3.1e-89
WP_002220902.1|5198_6365_-	plasmid-partitioning protein SopA	NA	Q7Y3Y6	Yersinia_phage	85.3	3.5e-196
>prophage 2
NC_014017	Yersinia pestis Z176003 plasmid pCD1, complete sequence	68342	10651	66067	68342	protease,transposase	Enterobacteria_phage(40.0%)	59	NA	NA
WP_002213006.1|10651_11620_+|protease	T3SS effector cysteine protease YopT	protease	NA	NA	NA	NA
WP_002213004.1|11619_12018_+	type III secretion system chaperone SycT	NA	NA	NA	NA	NA
WP_002222515.1|12722_13142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_116442925.1|13890_14136_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_002229779.1|14377_15607_-	type III secretion system effector YopM	NA	NA	NA	NA	NA
WP_002229781.1|16000_16210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002212987.1|17335_18256_-	type III secretion system translocon subunit YopD	NA	NA	NA	NA	NA
WP_002212985.1|18274_19480_-	type III secretion system translocon subunit YopB	NA	NA	NA	NA	NA
WP_002222758.1|19457_19964_-	type III secretion system chaperone SycD/LcrH	NA	NA	NA	NA	NA
WP_002212981.1|19976_20957_-	type III secretion system needle tip protein LcrV	NA	NA	NA	NA	NA
WP_002212973.1|20958_21246_-	type III secretion system chaperone LcrG	NA	NA	NA	NA	NA
WP_002220918.1|21287_21728_-	type III secretion system chaperone LcrR	NA	NA	NA	NA	NA
WP_002212971.1|21724_23839_-	SctV family type III secretion system export apparatus subunit LcrD	NA	NA	NA	NA	NA
WP_002229791.1|23825_24170_-	type III secretion system chaperone YscY	NA	NA	NA	NA	NA
WP_002212969.1|24166_24535_-	type III secretion system protein YscX	NA	NA	NA	NA	NA
WP_002229794.1|24531_24903_-	type III secretion chaperone SycN	NA	NA	NA	NA	NA
WP_002212965.1|24889_25168_-	type III secretion system gatekeeper subunit TyeA	NA	NA	NA	NA	NA
WP_002212958.1|25148_26030_-	SctW family type III secretion system gatekeeper subunit YopN	NA	NA	NA	NA	NA
WP_002212955.1|26227_27547_+	SctN family type III secretion system ATPase YscN	NA	NA	NA	NA	NA
WP_002212952.1|27543_28008_+	type III secretion system central stalk protein YscO	NA	NA	NA	NA	NA
WP_002212950.1|28007_29375_+	type III secretion system needle length determinant YscP	NA	NA	NA	NA	NA
WP_002212948.1|29371_30295_+	SctQ family type III secretion system cytoplasmic ring protein YscQ	NA	NA	NA	NA	NA
WP_002212947.1|30291_30945_+	SctR family type III secretion system export apparatus subunit YscR	NA	NA	NA	NA	NA
WP_002212945.1|30946_31213_+	SctS family type III secretion system export apparatus subunit YscS	NA	NA	NA	NA	NA
WP_002212938.1|31209_31995_+	SctT family type III secretion system export apparatus subunit YscT	NA	NA	NA	NA	NA
WP_002212936.1|31994_33059_+	type III secretion system export apparatus switch protein YscU	NA	NA	NA	NA	NA
WP_002222527.1|33634_34030_+	type III secretion system pilotin YscW	NA	NA	NA	NA	NA
WP_002212931.1|34153_34969_+	virulence regulon transcriptional activator VirF	NA	NA	NA	NA	NA
WP_002229797.1|35047_35146_+	type III secretion system protein YscA	NA	NA	NA	NA	NA
WP_002212925.1|35371_35785_+	type III secretion system chaperone YscB	NA	NA	NA	NA	NA
WP_002212923.1|35790_37614_+	SctC family type III secretion system outer membrane ring subunit YscC	NA	NA	NA	NA	NA
WP_002212919.1|37610_38870_+	SctD family type III secretion system inner membrane ring subunit YscD	NA	NA	NA	NA	NA
WP_002212917.1|38866_39067_+	type III secretion system co-chaperone YscE	NA	NA	NA	NA	NA
WP_002212916.1|39067_39331_+	type III secretion system needle filament protein YscF	NA	NA	NA	NA	NA
WP_002229801.1|39332_39680_+	type III secretion system chaperone YscG	NA	NA	NA	NA	NA
WP_002212915.1|39676_40174_+	T3SS polymerization control protein YopR	NA	NA	NA	NA	NA
WP_002212914.1|40174_40522_+	SctI family type III secretion system inner rod subunit LcrO	NA	NA	NA	NA	NA
WP_002212912.1|40528_41263_+	SctJ family type III secretion inner membrane ring lipoprotein YscJ	NA	NA	NA	NA	NA
WP_002361471.1|41262_41892_+	type III secretion system sorting platform protein YscK	NA	NA	NA	NA	NA
WP_010981371.1|41837_42503_+	SctL family type III secretion system stator protein YscL	NA	NA	NA	NA	NA
WP_002212907.1|42727_43075_+	type III secretion system exported negative regulator LcrQ/YscM1	NA	NA	NA	NA	NA
WP_002213278.1|45163_46570_-	T3SS effector protein-tyrosine-phosphatase YopH	NA	NA	NA	NA	NA
WP_002213287.1|48252_49119_-	type III secretion system effector acetyltransferase YopJ	NA	NA	NA	NA	NA
WP_002213290.1|49514_51713_-	type III secretion system effector protein kinase YopO/YpkA	NA	NA	NA	NA	NA
WP_002229809.1|51720_52170_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213291.1|52915_53155_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213292.1|54327_55206_-	incFII family plasmid replication initiator RepA	NA	NA	NA	NA	NA
WP_002233140.1|55186_55261_-	RepA leader peptide Tap	NA	NA	NA	NA	NA
WP_002229817.1|55502_55757_-	replication regulatory protein RepA	NA	NA	NA	NA	NA
WP_002233137.1|55894_56143_-	phospholipase	NA	A0A1B2LRT6	Wolbachia_phage	47.1	9.2e-06
WP_002213294.1|56559_56967_-|transposase	IS3 family transposase	transposase	A0A1P8CWQ3	Bacillus_phage	29.2	4.7e-07
WP_002213244.1|56990_57308_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_002213246.1|57479_57938_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042469136.1|58006_58276_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_002213256.1|60887_63203_-|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	51.6	1.0e-279
WP_002213258.1|63366_63918_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	80.3	5.9e-77
WP_002224338.1|63936_64401_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002229829.1|64539_64869_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086016640.1|64968_66067_+|transposase	IS3-like element ISYpe1 family transposase	transposase	S5WIU1	Leptospira_phage	38.5	1.4e-45
>prophage 1
NC_014022	Yersinia pestis Z176003 plasmid pMT1, complete sequence	94251	86	64182	94251	tail,terminase,transposase	Salmonella_phage(91.94%)	65	NA	NA
WP_000255944.1|86_1109_+|transposase	IS21-like element IS100 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	100.0	1.9e-201
WP_001297096.1|1108_1888_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	99.6	4.5e-139
WP_002211769.1|2021_2630_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	62.2	4.8e-64
WP_002211770.1|2931_5820_-|tail	phage tail protein	tail	J9Q6E3	Salmonella_phage	33.1	4.5e-11
WP_002211771.1|5900_6479_-	DUF4376 domain-containing protein	NA	Q9LA61	Enterobacterial_phage	38.8	3.4e-27
WP_002214118.1|6535_11167_-	DUF1983 domain-containing protein	NA	J9Q713	Salmonella_phage	88.6	0.0e+00
WP_002211773.1|11188_11776_-|tail	tail assembly protein	tail	J9Q7F8	Salmonella_phage	92.8	5.1e-103
WP_002211774.1|11763_12561_-	C40 family peptidase	NA	J9Q7R4	Salmonella_phage	96.2	1.4e-156
WP_002211775.1|12553_13252_-|tail	phage minor tail protein L	tail	J9Q7Y5	Salmonella_phage	99.1	7.1e-136
WP_000440566.1|13341_13677_-|tail	phage tail protein	tail	J9Q6E1	Salmonella_phage	97.3	5.7e-59
WP_002211776.1|13718_18296_-	tape measure protein	NA	J9Q712	Salmonella_phage	90.5	0.0e+00
WP_000952684.1|18303_18528_-	hypothetical protein	NA	J9Q7F7	Salmonella_phage	100.0	4.2e-34
WP_000163862.1|18653_18971_-	hypothetical protein	NA	J9Q7R3	Salmonella_phage	98.1	6.0e-50
WP_002211778.1|19030_19777_-	Ig domain-containing protein	NA	J9Q7Y4	Salmonella_phage	98.8	5.2e-129
WP_002211779.1|19851_20235_-	hypothetical protein	NA	J9Q6D8	Salmonella_phage	98.4	1.1e-66
WP_002211780.1|20236_20710_-	hypothetical protein	NA	J9Q711	Salmonella_phage	99.4	8.9e-82
WP_001027662.1|20700_21045_-	hypothetical protein	NA	J9Q7F6	Salmonella_phage	100.0	1.9e-57
WP_002211781.1|21142_21976_-	hypothetical protein	NA	J9Q7R2	Salmonella_phage	99.6	2.9e-152
WP_002211782.1|21975_22410_-	hypothetical protein	NA	J9Q7Y3	Salmonella_phage	99.3	3.1e-73
WP_002211783.1|22453_23116_-	Ig domain-containing protein	NA	J9Q6D6	Salmonella_phage	97.2	8.5e-107
WP_002211784.1|23190_24066_-	hypothetical protein	NA	J9Q710	Salmonella_phage	99.7	8.5e-163
WP_002211785.1|24092_24926_-	hypothetical protein	NA	J9Q7F4	Salmonella_phage	91.3	5.8e-137
WP_002211786.1|24948_26523_-	hypothetical protein	NA	J9Q7R1	Salmonella_phage	99.2	2.4e-301
WP_002211787.1|26556_27813_-|terminase	terminase	terminase	J9Q7Y2	Salmonella_phage	100.0	1.8e-251
WP_002211788.1|27815_28457_-	hypothetical protein	NA	J9Q6D4	Salmonella_phage	98.1	1.2e-108
WP_000176291.1|28652_28919_-	hypothetical protein	NA	J9Q757	Salmonella_phage	100.0	1.3e-42
WP_002211789.1|28928_29819_-	hypothetical protein	NA	J9Q7I6	Salmonella_phage	99.7	6.2e-169
WP_002211790.1|29824_30079_-	hypothetical protein	NA	J9Q7U0	Salmonella_phage	97.6	2.0e-40
WP_002211791.1|30071_30710_-	ATP-binding cassette domain-containing protein	NA	J9Q807	Salmonella_phage	98.1	4.7e-110
WP_002211792.1|30706_31375_-	ParB N-terminal domain-containing protein	NA	J9Q6L1	Salmonella_phage	98.2	9.5e-114
WP_002228791.1|31374_32073_-	ParB N-terminal domain-containing protein	NA	J9Q756	Salmonella_phage	98.7	9.6e-125
WP_002211794.1|32137_33697_+	DEAD/DEAH box helicase	NA	J9Q7I4	Salmonella_phage	99.0	1.1e-293
WP_002214131.1|33699_33978_+	hypothetical protein	NA	J9Q7T9	Salmonella_phage	97.8	4.4e-41
WP_002211796.1|34037_34460_+	hypothetical protein	NA	J9Q806	Salmonella_phage	85.0	4.1e-62
WP_002214134.1|34464_34992_+	transcriptional regulator	NA	J9Q6L0	Salmonella_phage	98.0	6.4e-81
WP_002211799.1|35314_35965_+	hypothetical protein	NA	J9Q754	Salmonella_phage	99.5	4.1e-114
WP_002214137.1|36049_36277_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002211801.1|36915_37398_-	hypothetical protein	NA	J9Q805	Salmonella_phage	94.4	5.1e-85
WP_002211802.1|37603_37885_-	hypothetical protein	NA	J9Q753	Salmonella_phage	93.5	6.1e-46
WP_002213775.1|38084_38543_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	D9CGB6	Hyperthermophilic_Archaeal_Virus_2	35.3	5.0e-13
WP_002214145.1|38751_39321_-	hypothetical protein	NA	J9Q7Z7	Salmonella_phage	100.0	5.8e-104
WP_002213303.1|39333_40080_-	hypothetical protein	NA	J9Q6J5	Salmonella_phage	96.4	4.1e-134
WP_002214148.1|40069_41986_-	AAA family ATPase	NA	J9Q741	Salmonella_phage	98.6	0.0e+00
WP_002213300.1|42215_43301_-	metallophosphoesterase	NA	J9Q7S9	Salmonella_phage	98.6	7.7e-206
WP_002213298.1|43716_44739_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_002214160.1|45098_45743_-	hypothetical protein	NA	J9Q739	Salmonella_phage	98.1	1.8e-122
WP_002214164.1|46487_47552_+	replication protein RepA	NA	J9Q7H0	Salmonella_phage	98.6	2.4e-188
WP_002222711.1|48120_48333_-	hypothetical protein	NA	J9Q7S8	Salmonella_phage	95.7	6.8e-34
WP_002227818.1|48332_48668_-	hypothetical protein	NA	J9Q7Z5	Salmonella_phage	91.0	5.2e-52
WP_002228796.1|48664_48844_-	hypothetical protein	NA	J9Q6J1	Salmonella_phage	86.4	5.8e-18
WP_002228797.1|48884_49160_-	hypothetical protein	NA	J9Q738	Salmonella_phage	95.6	1.7e-45
WP_002222869.1|49227_49638_-	hypothetical protein	NA	J9Q7G9	Salmonella_phage	97.8	4.1e-75
WP_002222868.1|49621_49993_-	DUF2591 domain-containing protein	NA	J9Q7S7	Salmonella_phage	87.8	4.0e-61
WP_002222866.1|50146_50977_-	hypothetical protein	NA	J9Q7Z4	Salmonella_phage	98.6	9.3e-127
WP_002213439.1|50980_51181_-	hypothetical protein	NA	J9Q6J0	Salmonella_phage	97.0	1.1e-25
WP_000920226.1|52350_52617_-	hypothetical protein	NA	J9Q7G8	Salmonella_phage	100.0	1.6e-40
WP_002225551.1|52616_53561_-	exonuclease	NA	J9Q7S6	Salmonella_phage	99.0	1.3e-180
WP_002213132.1|53621_54650_-	hypothetical protein	NA	J9Q7Z3	Salmonella_phage	98.5	1.3e-165
WP_002213135.1|54769_55201_-	hypothetical protein	NA	J9Q6I8	Salmonella_phage	98.6	2.6e-72
WP_002215095.1|55421_55673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002213141.1|55745_56309_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	64.6	2.2e-63
WP_002425587.1|56338_56764_-	hypothetical protein	NA	J9Q7S4	Salmonella_phage	100.0	7.5e-72
WP_002221186.1|56778_60303_-	DNA polymerase III subunit alpha	NA	J9Q7Z2	Salmonella_phage	99.2	0.0e+00
WP_002211767.1|60483_61719_-	AAA family ATPase	NA	J9Q733	Salmonella_phage	99.3	3.0e-238
WP_002211766.1|61815_64182_-	porphyrin biosynthesis protein	NA	J9Q7G6	Salmonella_phage	94.4	0.0e+00
