The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012034	Caldicellulosiruptor bescii DSM 6725, complete genome	2919718	70961	79224	2919718	coat	Staphylococcus_phage(16.67%)	8	NA	NA
WP_012660725.1|70961_71696_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	1.6e-16
WP_012660726.1|71740_72472_+	NTP transferase domain-containing protein	NA	G3MA50	Bacillus_virus	50.0	2.0e-56
WP_012660727.1|72494_72956_+|coat	spore coat protein	coat	A0A218MN57	uncultured_virus	28.4	1.4e-07
WP_012660728.1|72971_73928_+	dTDP-glucose 4,6-dehydratase	NA	A0A291LAD7	Escherichia_phage	46.2	2.1e-77
WP_079503990.1|73905_76104_+	FkbM family methyltransferase	NA	A0A291AUV0	Sinorhizobium_phage	26.0	8.0e-08
WP_012660730.1|76103_77345_+	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
WP_012660731.1|77374_78382_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_012660732.1|78378_79224_+	dTDP-4-dehydrorhamnose reductase	NA	A0A2D2W2J1	Stenotrophomonas_phage	43.4	9.8e-07
>prophage 2
NC_012034	Caldicellulosiruptor bescii DSM 6725, complete genome	2919718	1530781	1542927	2919718		Synechococcus_phage(33.33%)	11	NA	NA
WP_015907906.1|1530781_1531438_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.9	1.5e-18
WP_015907907.1|1531434_1532460_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A0E3F760	Synechococcus_phage	42.9	1.9e-68
WP_015907908.1|1532463_1533888_-	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	34.8	3.6e-62
WP_015907909.1|1533869_1536062_-	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	40.7	9.9e-160
WP_015907910.1|1536068_1536767_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA	NA
WP_013430231.1|1536770_1537019_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_015907911.1|1537056_1537776_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	G8EYA2	Synechococcus_phage	41.9	5.2e-41
WP_015907912.1|1537899_1539288_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	32.7	2.1e-54
WP_015907913.1|1539506_1540736_-	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	30.2	1.4e-09
WP_015907914.1|1540827_1542231_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	37.8	4.1e-42
WP_015907915.1|1542255_1542927_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	47.7	1.8e-56
>prophage 3
NC_012034	Caldicellulosiruptor bescii DSM 6725, complete genome	2919718	2086560	2138091	2919718	coat,transposase,integrase	uncultured_virus(25.0%)	48	2095479:2095525	2138274:2138320
WP_015908348.1|2086560_2087661_+|transposase	IS481-like element ISCbe2 family transposase	transposase	NA	NA	NA	NA
WP_015908349.1|2087806_2088424_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_013432084.1|2088484_2088766_-|coat	spore coat protein	coat	NA	NA	NA	NA
WP_013402742.1|2088786_2088987_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908350.1|2089072_2089744_-	L,D-transpeptidase family protein	NA	NA	NA	NA	NA
WP_015908351.1|2089869_2090256_-	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_015908352.1|2090261_2091110_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_015908353.1|2091109_2091904_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	M4QNT1	Ostreococcus_lucimarinus_virus	40.5	2.7e-51
WP_015908354.1|2091900_2092749_-	Rossmann-like and DUF2520 domain-containing protein	NA	NA	NA	NA	NA
WP_013429749.1|2093061_2093580_+	ferritin	NA	NA	NA	NA	NA
WP_015908355.1|2093594_2094692_-|transposase	IS481-like element ISCbe2 family transposase	transposase	NA	NA	NA	NA
WP_079504027.1|2094956_2095178_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
2095479:2095525	attL	ACTACGGATCTGAGGGTTGGGGGTTCGAGTCCTCCTGGGCGCGCCAG	NA	NA	NA	NA
WP_015908356.1|2095696_2095912_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_088217567.1|2096410_2096569_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_015908358.1|2097712_2098129_-	PIN domain-containing protein	NA	NA	NA	NA	NA
WP_015908359.1|2098128_2098395_-	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_015908360.1|2098641_2100459_-	superfamily I DNA and RNA helicase and helicase subunits-like protein	NA	NA	NA	NA	NA
WP_015908361.1|2100750_2101080_-	hypothetical protein	NA	NA	NA	NA	NA
WP_143288901.1|2101076_2101610_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908363.1|2101627_2101813_-	Arc family DNA-binding protein	NA	S5MUK4	Brevibacillus_phage	52.6	1.9e-08
WP_015908364.1|2102905_2103748_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015908365.1|2103827_2104925_+	2-hydroxyacid dehydrogenase	NA	A0A2R8FDS8	Brazilian_cedratvirus	32.1	1.1e-26
WP_015908366.1|2104921_2105767_+	class II fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_015908367.1|2106058_2107417_+	gluconate permease	NA	NA	NA	NA	NA
WP_015908368.1|2107545_2109063_+	carbohydrate kinase	NA	NA	NA	NA	NA
WP_015908369.1|2109418_2110642_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	47.4	2.0e-48
WP_157678160.1|2111760_2111916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908372.1|2113793_2115053_-	DUF11 domain-containing protein	NA	NA	NA	NA	NA
WP_015908373.1|2115074_2116175_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049760258.1|2116182_2117439_-	hypothetical protein	NA	NA	NA	NA	NA
WP_143287952.1|2117523_2117958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908374.1|2118439_2118664_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA	NA
WP_041727417.1|2118664_2118865_-	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
WP_015908376.1|2119244_2119571_-	hypothetical protein	NA	NA	NA	NA	NA
WP_079504030.1|2120962_2121541_-	AAA family ATPase	NA	U5N3V8	Enterobacteria_phage	37.6	1.3e-29
WP_015908377.1|2124922_2126146_-|transposase	IS256-like element ISCbe6 family transposase	transposase	A0A218MNI5	uncultured_virus	46.4	9.7e-48
WP_157678162.1|2126377_2126512_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157678164.1|2126519_2126696_-	hypothetical protein	NA	NA	NA	NA	NA
WP_049760261.1|2126783_2126972_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_156046819.1|2126961_2127111_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041727181.1|2127719_2128574_+	DNA adenine methylase	NA	A0A2K9R7J9	Dishui_lake_phycodnavirus	26.3	4.9e-14
WP_015908380.1|2128593_2129967_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908381.1|2129996_2132099_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_015908382.1|2133987_2134317_-	radical SAM domain-containing protein	NA	NA	NA	NA	NA
WP_015908384.1|2135210_2135390_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041727420.1|2135578_2135836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908386.1|2136127_2136715_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908387.1|2136912_2138091_+|integrase	site-specific integrase	integrase	A0A0A8WIE1	Clostridium_phage	31.7	6.3e-44
2138274:2138320	attR	ACTACGGATCTGAGGGTTGGGGGTTCGAGTCCTCCTGGGCGCGCCAG	NA	NA	NA	NA
>prophage 4
NC_012034	Caldicellulosiruptor bescii DSM 6725, complete genome	2919718	2574181	2621302	2919718	transposase,integrase	Streptococcus_phage(10.53%)	52	2570865:2570885	2610158:2610178
2570865:2570885	attL	AACCCCGGCTCAAAAGCCCTT	NA	NA	NA	NA
WP_015908748.1|2574181_2575462_-|transposase	transposase	transposase	A0A1S5RFS3	Helicobacter_phage	28.3	1.6e-16
WP_015908749.1|2575522_2575894_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908750.1|2575916_2577212_-	AAA family ATPase	NA	A0A1P8VVQ6	Streptococcus_phage	32.0	2.5e-46
WP_143289895.1|2577232_2578894_-	hypothetical protein	NA	U6C6J3	Ralstonia_phage	47.6	2.3e-15
WP_015908752.1|2578886_2579120_-	helix-turn-helix transcriptional regulator	NA	A0A1U9WQN6	Geobacillus_phage	44.8	2.7e-07
WP_015908753.1|2579256_2579574_+	helix-turn-helix transcriptional regulator	NA	A0A1U9WQN6	Geobacillus_phage	44.9	2.0e-05
WP_015908754.1|2579884_2580199_+	helix-turn-helix transcriptional regulator	NA	A0A0P0IZG9	Lactobacillus_phage	34.9	7.1e-11
WP_015908755.1|2580237_2581077_-	DNA adenine methylase	NA	M4R1L7	Synechococcus_phage	36.2	4.8e-46
WP_015908756.1|2581123_2582104_-	HaeIII family restriction endonuclease	NA	NA	NA	NA	NA
WP_015908757.1|2582169_2583021_-|integrase	tyrosine-type recombinase/integrase	integrase	A3F636	Streptococcus_phage	25.5	2.6e-07
WP_015908758.1|2583263_2583476_-	winged helix-turn-helix transcriptional regulator	NA	A5LH73	Enterobacteria_phage	46.4	1.2e-09
WP_015908759.1|2583588_2585796_-	M23 family metallopeptidase	NA	A0A2H4JB19	uncultured_Caudovirales_phage	38.9	3.5e-11
WP_015908760.1|2585802_2586045_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908761.1|2586113_2587529_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_015908762.1|2587833_2588205_-	hypothetical protein	NA	A0A2K5B270	Erysipelothrix_phage	45.5	9.9e-20
WP_015908763.1|2588186_2588561_-	RusA family crossover junction endodeoxyribonuclease	NA	J7I4J7	Pseudomonas_phage	35.1	3.3e-07
WP_015908764.1|2588682_2589153_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
WP_015908765.1|2589169_2589691_-	HD domain-containing protein	NA	NA	NA	NA	NA
WP_015908766.1|2589754_2590225_-	single-stranded DNA-binding protein	NA	A0A139ZPL3	Marinitoga_camini_virus	33.3	3.8e-08
WP_015908767.1|2590245_2590689_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908768.1|2590717_2591248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099716406.1|2591249_2592053_-	secretion system protein	NA	NA	NA	NA	NA
WP_015908770.1|2592049_2592961_-	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_015908771.1|2592966_2594157_-	CpaF family protein	NA	NA	NA	NA	NA
WP_015908772.1|2594101_2594809_-	ParA family protein	NA	NA	NA	NA	NA
WP_015908773.1|2594823_2595408_-	SAF domain-containing protein	NA	NA	NA	NA	NA
WP_015908774.1|2595424_2596243_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908775.1|2596230_2596674_-	peptidase A24	NA	NA	NA	NA	NA
WP_015908776.1|2596666_2598163_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_015908777.1|2598172_2598859_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908778.1|2598876_2599482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908779.1|2599481_2599892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908780.1|2599951_2600152_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908781.1|2600216_2601920_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908782.1|2601934_2603818_-	hypothetical protein	NA	NA	NA	NA	NA
WP_157678170.1|2603982_2604174_+	hypothetical protein	NA	NA	NA	NA	NA
WP_015908783.1|2604554_2605106_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908784.1|2605077_2605851_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_015908785.1|2605847_2606216_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_041727228.1|2606969_2607671_+	DUF3800 domain-containing protein	NA	Q71TB8	Escherichia_phage	45.8	3.3e-56
WP_015908787.1|2607673_2608174_+	hypothetical protein	NA	Q71TB7	Escherichia_phage	34.8	1.4e-13
WP_157678172.1|2608472_2608640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908788.1|2608836_2609784_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_015908789.1|2610502_2610949_-	hypothetical protein	NA	NA	NA	NA	NA
2610158:2610178	attR	AACCCCGGCTCAAAAGCCCTT	NA	NA	NA	NA
WP_015908790.1|2610917_2612333_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_015908792.1|2612944_2613874_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_015908793.1|2614081_2614867_-	phage antirepressor Ant	NA	A0A1L2JY15	Aeribacillus_phage	50.4	4.8e-64
WP_015908794.1|2615730_2616066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908795.1|2616160_2616484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908796.1|2616860_2619506_-	N-6 DNA methylase	NA	A0A2H4UVI2	Bodo_saltans_virus	24.8	5.1e-09
WP_015908797.1|2619729_2620896_-|transposase	IS200/IS605 family element transposase accessory protein TnpB	transposase	A0A0H3UZC2	Geobacillus_virus	48.4	1.5e-93
WP_015908798.1|2620897_2621302_-|transposase	IS200/IS605 family transposase	transposase	A0A1P8BMC0	Lactococcus_phage	40.1	2.6e-26
>prophage 5
NC_012034	Caldicellulosiruptor bescii DSM 6725, complete genome	2919718	2753762	2819517	2919718	protease,transposase,bacteriocin	Bacillus_phage(40.0%)	48	NA	NA
WP_015908929.1|2753762_2753987_-|bacteriocin	circular bacteriocin, circularin A/uberolysin family	bacteriocin	NA	NA	NA	NA
WP_041727453.1|2754477_2756322_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	31.7	2.0e-60
WP_015908931.1|2756314_2758051_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	30.5	1.7e-50
WP_015908932.1|2758034_2758532_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_015908933.1|2758771_2759509_+	DUF554 domain-containing protein	NA	NA	NA	NA	NA
WP_015908934.1|2759947_2760439_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011916100.1|2760713_2761679_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	32.1	5.4e-25
WP_015908935.1|2761662_2762808_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_015908936.1|2762789_2763908_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_015908937.1|2764093_2765212_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_015908938.1|2765198_2765834_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_015908941.1|2766626_2767580_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_015908942.1|2767821_2768019_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908943.1|2768056_2768422_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908944.1|2768447_2770067_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908946.1|2770582_2771011_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908947.1|2771114_2771333_-|protease	M48 family metalloprotease	protease	NA	NA	NA	NA
WP_015908949.1|2771805_2772282_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_015908950.1|2772833_2773130_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_015908951.1|2773136_2774108_+	permease	NA	NA	NA	NA	NA
WP_015908952.1|2774140_2774386_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_015908953.1|2774586_2775501_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_013291477.1|2775664_2776060_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	50.9	1.3e-22
WP_015908954.1|2776081_2776732_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908955.1|2776966_2778391_+	MFS transporter	NA	NA	NA	NA	NA
WP_015908956.1|2778435_2779092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908957.1|2779186_2780242_-	[FeFe] hydrogenase H-cluster radical SAM maturase HydE	NA	NA	NA	NA	NA
WP_015908958.1|2780424_2782869_+	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_015908959.1|2783723_2785109_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_015908960.1|2786498_2787581_-	DUF1848 domain-containing protein	NA	NA	NA	NA	NA
WP_015908961.1|2787618_2788542_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908962.1|2789180_2791535_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049760267.1|2792692_2793154_+	DUF975 family protein	NA	NA	NA	NA	NA
WP_013404366.1|2795379_2795643_-	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
WP_015908965.1|2795648_2796641_-	type I-B CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_041727458.1|2796687_2797185_-	CRISPR-associated protein Cas4	NA	NA	NA	NA	NA
WP_015908967.1|2797213_2799637_-	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA	NA
WP_015908968.1|2799728_2800481_-	type I-B CRISPR-associated protein Cas5	NA	NA	NA	NA	NA
WP_015908969.1|2800501_2801407_-	type I-B CRISPR-associated protein Cas7/Csh2	NA	NA	NA	NA	NA
WP_015908970.1|2801427_2803488_-	TIGR02556 family CRISPR-associated protein	NA	NA	NA	NA	NA
WP_079504043.1|2808712_2809165_-|transposase	IS200/IS605 family transposase	transposase	A0A286QN76	Streptococcus_phage	69.9	2.0e-51
WP_015908975.1|2810289_2811972_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908976.1|2812245_2812800_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908977.1|2812771_2813539_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA	NA
WP_015908978.1|2813531_2813888_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_015908979.1|2814318_2815281_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
WP_041727251.1|2818112_2818436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_015908982.1|2818521_2819517_-|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	NA	NA	NA	NA
