bac_id	spacer_id	hit_phage_id	hit_phage_def	spacer_sequence	hit_phage_region	hit_phage_sequence	mismatch	coverage	hmm_mismatch
NC_011992	1.2|61597|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP021369	Acidovorax carolinensis strain P4 plasmid pACP4.3, complete sequence	CGGCAGGGTTTGGGGGAGGCGATTAAATTT	11190-11219	AAATTTAATCGCCTCCCCCAAACCCTGCCG	0	1.0	0
NC_011992	1.3|61663|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP026974	Achromobacter insolitus strain FDAARGOS_88 plasmid unnamed1, complete sequence	CAGCTATGCAGCGCAGGGCATATGCTGCAT	325561-325590	CGGCAGCATATGCCCTGCGCAGCGAAATGA	1	0.7	9
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	244959-244988	GATCGCGCGCAGCTTGCCGGACTTGACCCC	2	0.7666666666666667	8
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_023714	Mycobacterium phage LinStu, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	20334-20363	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MT889395	Mycobacterium phage Shifa, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	18434-18463	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK450422	Mycobacterium phage RoMag, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	18500-18529	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK359355	Mycobacterium phage Sprinklers, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	18499-18528	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK359349	Mycobacterium phage FoxtrotP1, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	19909-19938	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK359345	Mycobacterium phage QBert, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	19318-19347	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_028869	Mycobacterium phage HyRo, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	18988-19017	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.4|61729|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	JN204348	Mycobacterium phage Sebata, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	20453-20482	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	244959-244988	GATCGCGCGCAGCTTGCCGGACTTGACCCC	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_023714	Mycobacterium phage LinStu, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	20334-20363	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MT889395	Mycobacterium phage Shifa, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	18434-18463	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK450422	Mycobacterium phage RoMag, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	18500-18529	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK359355	Mycobacterium phage Sprinklers, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	18499-18528	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK359349	Mycobacterium phage FoxtrotP1, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	19909-19938	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK359345	Mycobacterium phage QBert, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	19318-19347	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_028869	Mycobacterium phage HyRo, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	18988-19017	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.5|61795|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	JN204348	Mycobacterium phage Sebata, complete genome	GAAAGCAGGTCCGGCAAGCTACGCGCGACA	20453-20482	TGTCGCGCGTAGCTGGTCGGACCGGGAGCG	2	0.7666666666666667	8
NC_011992	1.6|61861|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_048704	Pectobacterium phage Nepra, complete genome	ATCAGCCTGAGCCTTTGCAGAGGCTTCCTC	70659-70688	CGACATTTGAGCTTTTGCATAGGCTTCCTC	2	0.7666666666666667	9
NC_011992	1.6|61861|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_048659	Pectobacterium phage phiA41, complete genome	ATCAGCCTGAGCCTTTGCAGAGGCTTCCTC	56363-56392	CGACATTTGAGCTTTTGCATAGGCTTCCTC	2	0.7666666666666667	9
NC_011992	1.6|61861|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	KY083726	Pectobacterium phage A38, complete genome	ATCAGCCTGAGCCTTTGCAGAGGCTTCCTC	56363-56392	CGACATTTGAGCTTTTGCATAGGCTTCCTC	2	0.7666666666666667	9
NC_011992	1.7|61927|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK240575	Thermobifida phage P318, complete genome	CATTCCCCCCGTGGCTCGTAATTTCGCATT	46282-46311	CTACTTCCCCGTGGCTAGTAACTTCGCATG	2	0.7666666666666667	8
NC_011992	1.11|62191|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP027853	Plesiomonas shigelloides strain MS-17-188 plasmid pPS-MS-17-188-1, complete sequence	GGATCGCCGTGGGTAATGCGAACGACGTTA	185552-185581	CACTGAATTTCGCATTACCCACGGTGATCG	1	0.7	8
NC_011992	1.12|62257|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP020716	Cnuibacter physcomitrellae strain XA(T) plasmid unnamed1, complete sequence	AACACGTTCCCAGCGGCCTTTTGGGCGTCC	56866-56895	GGGCGCCCAAAAGGCCGCTGGGCCGATCGA	1	0.7333333333333333	8
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP040764	Paracoccus sp. 2251 plasmid unnamed3, complete sequence	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	65332-65361	GCGGACGCCCGGCGCGAAACGGCCATCGAC	2	0.8	7
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	589589-589618	GCCGATGCCCTGCGCGAAGCGGCCATCGCT	2	0.8	5
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	JX163858	Caulobacter phage phiCbK, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	182483-182512	GCGATCGCCCGGCGCGACGAGGCCCTCGCG	2	0.8	7
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP050991	Chromobacterium violaceum strain FDAARGOS_635 plasmid unnamed, complete sequence	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	42259-42288	GGCGATGGCCTCCTCGCGCAGGGCGGCGAA	2	0.8	7
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_MG651603	Chromobacterium violaceum strain ATCC 12472 plasmid pChV1, complete sequence	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	29283-29312	GGCGATGGCCTCCTCGCGCAGGGCGGCGAA	2	0.8	7
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	KY555147	Caulobacter phage Ccr34, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	25344-25373	CGCGAGGGCCTCGTCGCGCCGGGCGATCGC	2	0.8	7
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	KY555146	Caulobacter phage Ccr32, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	25345-25374	CGCGAGGGCCTCGTCGCGCCGGGCGATCGC	2	0.8	7
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP015742	Shinella sp. HZN7 plasmid pShin-06, complete sequence	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	49603-49632	GAACATGCCCGGCGCGAAGAGGTCATCCAA	1	0.7	8
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP024609	Massilia violaceinigra strain B2 plasmid unnamed, complete sequence	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	24172-24201	TGTTTCGCCTGGCGCGAACAGGCCATCGGA	2	0.7666666666666667	7
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK977714	Corynebacterium phage Bran, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	8978-9007	ATTGTCGCCCAGCGCGAAGAGGCCACCGGC	2	0.7666666666666667	9
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_048780	Corynebacterium phage StAB, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	8966-8995	ATTGTCGCCCAGCGCGAAGAGGCCACCGGC	2	0.7666666666666667	9
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MK977706	Corynebacterium phage Dina, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	8962-8991	ATTGTCGCCCAGCGCGAAGAGGCCACCGGC	2	0.7666666666666667	9
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MH926061	Corynebacterium phage Troy, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	8960-8989	ATTGTCGCCCAGCGCGAAGAGGCCACCGGC	2	0.7666666666666667	9
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_048789	Corynebacterium phage Stiles, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	8960-8989	ATTGTCGCCCAGCGCGAAGAGGCCACCGGC	2	0.7666666666666667	9
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_048791	Corynebacterium phage Adelaide, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	8973-9002	ATTGTCGCCCAGCGCGAAGAGGCCACCGGC	2	0.7666666666666667	9
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_048069	Corynebacterium phage SamW, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	8960-8989	ATTGTCGCCCAGCGCGAAGAGGCCACCGGC	2	0.7666666666666667	9
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NC_048790	Corynebacterium phage Lederberg, complete genome	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	8960-8989	ATTGTCGCCCAGCGCGAAGAGGCCACCGGC	2	0.7666666666666667	9
NC_011992	1.13|62323|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	GGCTACGCCCGGCGCGAAGAGGCCATCGCT	468266-468295	GACGATGGCTTCTTCGCGCTGGGCGGCGAC	2	0.7666666666666667	7
NC_011992	1.14|62389|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	CTGGACGGAGGGACAACAGCATGAGCGAGA	196023-196052	TGAATTGGAGGGACGACAGCATGAGAGAGA	2	0.8	8
NC_011992	1.14|62389|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP011248	Agrobacterium tumefaciens strain Ach5 plasmid pAt, complete sequence	CTGGACGGAGGGACAACAGCATGAGCGAGA	396330-396359	ATGCACGGAGGGACATCAGCATGACAGCCA	2	0.7666666666666667	7
NC_011992	1.14|62389|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP032919	Agrobacterium tumefaciens strain 15955 plasmid pAt15955, complete sequence	CTGGACGGAGGGACAACAGCATGAGCGAGA	667040-667069	ATGCACGGAGGGACATCAGCATGACAGCCA	2	0.7666666666666667	7
NC_011992	1.14|62389|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	NZ_CP033029	Agrobacterium tumefaciens strain A6 plasmid pAtA6, complete sequence	CTGGACGGAGGGACAACAGCATGAGCGAGA	667123-667152	ATGCACGGAGGGACATCAGCATGACAGCCA	2	0.7666666666666667	7
NC_011992	1.14|62389|30|NC_011992|CRISPRCasFinder,CRT,PILER-CR	MN734438	Sphingomonas phage Lucius, complete genome	CTGGACGGAGGGACAACAGCATGAGCGAGA	38238-38267	TCAACCGGAAGGACAACAGCATGACCGAAG	2	0.7666666666666667	9
NC_011992	3.1|1961838|29|NC_011992|CRISPRCasFinder	NC_015727	Cupriavidus necator N-1 plasmid pBB1, complete sequence	ACCGACTGGGGCGTGCAGGTGCAGGAATC	39323-39351	GCCGACTGGGGCGTGCAGGCGCTCGAGCG	1	0.7241379310344828	7
NC_011992	3.1|1961838|29|NC_011992|CRISPRCasFinder	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	ACCGACTGGGGCGTGCAGGTGCAGGAATC	452784-452812	CGGAGATTCACCTCCACGCCCCAGTCGGT	1	0.7241379310344828	5
