assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	1	380638-380733	1	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	GGATCGGAAGCCTTTGACTTCGA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|389aa|up_0|NC_011901.1_378810_379977_+,NA|54aa|down_5|NC_011901.1_387361_387523_-,NA|117aa|down_6|NC_011901.1_388007_388358_+,NA|104aa|down_8|NC_011901.1_389421_389733_+,NA|213aa|down_9|NC_011901.1_389756_390395_+	NA|253aa|up_9|NC_011901.1_368360_369119_-	PRK09135, PRK09135, pteridine reductase; Provisional	NA|394aa|up_8|NC_011901.1_369189_370371_+	COG1565, COG1565, Uncharacterized conserved protein [Function unknown]	NA|267aa|up_7|NC_011901.1_370535_371336_+	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|410aa|up_6|NC_011901.1_371529_372759_-	PRK10885, cca, multifunctional CCA addition/repair protein	NA|315aa|up_5|NC_011901.1_373019_373964_-	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs	NA|453aa|up_4|NC_011901.1_374118_375477_+	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like	NA|202aa|up_3|NC_011901.1_375529_376135_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|418aa|up_2|NC_011901.1_376243_377497_+	COG4775, COG4775, Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis, outer membrane]	NA|328aa|up_1|NC_011901.1_377569_378553_-	PRK00164, moaA, GTP 3',8-cyclase MoaA	NA|389aa|up_0|NC_011901.1_378810_379977_+	NA	NA|328aa|down_0|NC_011901.1_380987_381971_-	pfam04976, DmsC, DMSO reductase anchor subunit (DmsC)	NA|244aa|down_1|NC_011901.1_381994_382726_-	cd10551, PsrB, polysulfide reductase beta (PsrB) subunit	NA|957aa|down_2|NC_011901.1_382722_385593_-	cd02763, MopB_2, The MopB_2 CD includes a group of related uncharacterized bacterial molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site	NA|172aa|down_3|NC_011901.1_385809_386325_+	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	NA|201aa|down_4|NC_011901.1_386391_386994_+	cd04640, CBS_pair_proteobact, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in proteobacteria	NA|54aa|down_5|NC_011901.1_387361_387523_-	NA	NA|117aa|down_6|NC_011901.1_388007_388358_+	NA	NA|339aa|down_7|NC_011901.1_388364_389381_+	pfam13480, Acetyltransf_6, Acetyltransferase (GNAT) domain	NA|104aa|down_8|NC_011901.1_389421_389733_+	NA	NA|213aa|down_9|NC_011901.1_389756_390395_+	NA
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	2	980201-980273	2	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	GTGAGACAAGTCCCTGCGTATTAC	24	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA,NA|105aa|down_0|NC_011901.1_980424_980739_+	NA|321aa|up_9|NC_011901.1_967342_968305_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|81aa|up_8|NC_011901.1_968436_968679_+	PRK00395, hfq, RNA-binding protein Hfq; Provisional	NA|433aa|up_7|NC_011901.1_968723_970022_+	PRK11058, PRK11058, GTPase HflX; Provisional	NA|394aa|up_6|NC_011901.1_970154_971336_+	cd03404, SPFH_HflK, High frequency of lysogenization K (HflK) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|290aa|up_5|NC_011901.1_971335_972205_+	cd03405, SPFH_HflC, High frequency of lysogenization C (HflC) family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|64aa|up_4|NC_011901.1_972264_972456_+	pfam09838, DUF2065, Uncharacterized protein conserved in bacteria (DUF2065)	NA|396aa|up_3|NC_011901.1_972698_973886_+	PRK12421, PRK12421, ATP phosphoribosyltransferase regulatory subunit; Provisional	NA|431aa|up_2|NC_011901.1_973888_975181_+	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional	NA|259aa|up_1|NC_011901.1_975338_976115_+	PRK12826, PRK12826, SDR family oxidoreductase	NA|249aa|up_0|NC_011901.1_978967_979714_+	PRK11181, PRK11181, 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA|105aa|down_0|NC_011901.1_980424_980739_+	NA	NA|327aa|down_1|NC_011901.1_981028_982009_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|290aa|down_2|NC_011901.1_982116_982986_-	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold	NA|337aa|down_3|NC_011901.1_982979_983990_-	cd12157, PTDH, Thermostable Phosphite Dehydrogenase	NA|276aa|down_4|NC_011901.1_983998_984826_-	TIGR01097, PhnE, phosphonate ABC transporter, permease protein PhnE	NA|288aa|down_5|NC_011901.1_984834_985698_-	cd13572, PBP2_PnhD_2, Substrate binding domain of uncharacterized ABC-type phosphonate-like transporter; contains the type 2 periplasmic binding fold	NA|276aa|down_6|NC_011901.1_985694_986522_-	TIGR02315, Phosphonates_import_ATP-binding_protein_PhnC, phosphonate ABC transporter, ATP-binding protein	NA|270aa|down_7|NC_011901.1_987968_988778_+	pfam10544, T5orf172, T5orf172 domain	NA|222aa|down_8|NC_011901.1_988893_989559_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|97aa|down_9|NC_011901.1_989707_989998_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	3	1277299-1277370	3	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	GAATGGACAGGATTTACAGGTTT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA,NA|118aa|down_8|NC_011901.1_1288582_1288936_+	NA|318aa|up_9|NC_011901.1_1263301_1264255_-	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|203aa|up_8|NC_011901.1_1264484_1265093_+	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like	NA|1163aa|up_7|NC_011901.1_1265252_1268741_+	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated	NA|320aa|up_6|NC_011901.1_1268914_1269874_+	PRK05724, PRK05724, acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated	NA|399aa|up_5|NC_011901.1_1270016_1271213_+	PRK10660, tilS, tRNA(Ile)-lysidine synthetase; Provisional	NA|390aa|up_4|NC_011901.1_1271373_1272543_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|280aa|up_3|NC_011901.1_1272613_1273453_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|269aa|up_2|NC_011901.1_1273455_1274262_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|548aa|up_1|NC_011901.1_1274799_1276443_+	PRK05380, pyrG, CTP synthetase; Validated	NA|281aa|up_0|NC_011901.1_1276448_1277291_+	PRK05198, PRK05198, 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional	NA|427aa|down_0|NC_011901.1_1277527_1278808_+	PRK00077, eno, enolase; Provisional	NA|96aa|down_1|NC_011901.1_1278969_1279257_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|236aa|down_2|NC_011901.1_1279253_1279961_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|158aa|down_3|NC_011901.1_1280158_1280632_+	pfam02542, YgbB, YgbB family	NA|427aa|down_4|NC_011901.1_1283299_1284580_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|276aa|down_5|NC_011901.1_1284756_1285584_+	cd11297, PIN_LabA-like_N_1, uncharacterized subfamily of N-terminal LabA-like PIN domains	NA|322aa|down_6|NC_011901.1_1285793_1286759_-	PRK11783, rlmL, bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL	NA|493aa|down_7|NC_011901.1_1286976_1288455_+	PRK00029, PRK00029, YdiU family protein	NA|118aa|down_8|NC_011901.1_1288582_1288936_+	NA	NA|108aa|down_9|NC_011901.1_1289064_1289388_-	pfam01491, Frataxin_Cyay, Frataxin-like domain
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	4	1779950-1780029	4	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	CCCCGTGGTGGTCGTCCCGGTGG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|98aa|up_7|NC_011901.1_1768956_1769250_-,NA|239aa|up_6|NC_011901.1_1769954_1770671_-,NA|257aa|down_9|NC_011901.1_1787909_1788680_+	NA|98aa|up_9|NC_011901.1_1767958_1768252_-	pfam13693, HTH_35, Winged helix-turn-helix DNA-binding	NA|164aa|up_8|NC_011901.1_1768410_1768902_+	pfam07022, Phage_CI_repr, Bacteriophage CI repressor helix-turn-helix domain	NA|98aa|up_7|NC_011901.1_1768956_1769250_-	NA	NA|239aa|up_6|NC_011901.1_1769954_1770671_-	NA	NA|545aa|up_5|NC_011901.1_1770907_1772542_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|261aa|up_4|NC_011901.1_1772810_1773593_+	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|544aa|up_3|NC_011901.1_1773675_1775307_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|529aa|up_2|NC_011901.1_1775662_1777249_+	PRK09776, PRK09776, putative diguanylate cyclase; Provisional	NA|254aa|up_1|NC_011901.1_1777283_1778045_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|139aa|up_0|NC_011901.1_1778120_1778537_+	pfam07386, DUF1499, Protein of unknown function (DUF1499)	NA|138aa|down_0|NC_011901.1_1780225_1780639_+	PRK05753, PRK05753, nucleoside diphosphate kinase regulator; Provisional	NA|208aa|down_1|NC_011901.1_1780769_1781393_+	cd03139, GATase1_PfpI_2, Type 1 glutamine amidotransferase (GATase1)-like domain found in a subgroup of proteins similar to PfpI from Pyrococcus furiosus	NA|249aa|down_2|NC_011901.1_1781392_1782139_+	pfam13852, DUF4197, Protein of unknown function (DUF4197)	NA|309aa|down_3|NC_011901.1_1782268_1783195_-	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain	NA|208aa|down_4|NC_011901.1_1783307_1783931_+	PRK03767, PRK03767, NAD(P)H:quinone oxidoreductase; Provisional	NA|139aa|down_5|NC_011901.1_1784063_1784480_+	PRK09256, PRK09256, aminoacyl-tRNA hydrolase	NA|607aa|down_6|NC_011901.1_1784476_1786297_+	COG5265, ATM1, ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]	NA|208aa|down_7|NC_011901.1_1786503_1787127_+	COG2236, COG2236, Predicted phosphoribosyltransferases [General function prediction only]	NA|178aa|down_8|NC_011901.1_1787153_1787687_+	cd17511, YbjN_AmyR-like, YbjN protein family is structurally similar to type III secretion system chaperones	NA|257aa|down_9|NC_011901.1_1787909_1788680_+	NA
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	5	1919871-1920472	1,5,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Type III-C,Type III-A,Type III-B,Type III-D	GTCCCTACCCGGGAAGCCGTTAAGGCTGTTGAAAC,GTCCCTACCCGGGAAGCCGTTAAGGCTGTTGAAACC,GTCCCTACCCGGGAAGCCGTTAAGGCTGTTGAAACC	35,36,36	0	0	NA	NA	NA:NA:NA	8,8,8	8	TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|180aa|up_2|NC_011901.1_1916601_1917141_-,NA|434aa|down_2|NC_011901.1_1923425_1924727_+,NA|81aa|down_3|NC_011901.1_1924902_1925145_-,NA|89aa|down_5|NC_011901.1_1926313_1926580_+,NA|107aa|down_6|NC_011901.1_1926609_1926930_+	cmr3gr5|386aa|up_9|NC_011901.1_1910945_1912103_+	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cmr4gr7|295aa|up_8|NC_011901.1_1912122_1913007_+	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4	cmr5gr11|133aa|up_7|NC_011901.1_1913003_1913402_+	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr6gr7|273aa|up_6|NC_011901.1_1913398_1914217_+	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	NA|286aa|up_5|NC_011901.1_1914213_1915071_+	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	NA|108aa|up_4|NC_011901.1_1915067_1915391_+	pfam08960, DUF1874, Domain of unknown function (DUF1874)	csx1|385aa|up_3|NC_011901.1_1915394_1916549_+	pfam09002, DUF1887, Domain of unknown function (DUF1887)	NA|180aa|up_2|NC_011901.1_1916601_1917141_-	NA	cas1|692aa|up_1|NC_011901.1_1917249_1919325_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|95aa|up_0|NC_011901.1_1919328_1919613_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|241aa|down_0|NC_011901.1_1920638_1921361_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	csx1|402aa|down_1|NC_011901.1_1921650_1922856_+	TIGR02221, CRISPR-associated_protein_Csx1_2, CRISPR-associated protein, TM1812 family	NA|434aa|down_2|NC_011901.1_1923425_1924727_+	NA	NA|81aa|down_3|NC_011901.1_1924902_1925145_-	NA	NA|297aa|down_4|NC_011901.1_1925335_1926226_+	pfam05623, DUF789, Protein of unknown function (DUF789)	NA|89aa|down_5|NC_011901.1_1926313_1926580_+	NA	NA|107aa|down_6|NC_011901.1_1926609_1926930_+	NA	NA|80aa|down_7|NC_011901.1_1927510_1927750_+	pfam08972, DUF1902, Domain of unknown function (DUF1902)	NA|66aa|down_8|NC_011901.1_1927750_1927948_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|74aa|down_9|NC_011901.1_1928077_1928299_+	pfam02586, SRAP, SOS response associated peptidase (SRAP)
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	6	1926086-1926180	6	CRISPRCasFinder	no	csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Type III-C,Type III-A,Type III-B,Type III-D	AGCAGCTGGGACAGCTCAAGTTC	23	0	0	NA	NA	NA	1	1	TypeIII-C,TypeIII-A,TypeIII-B,TypeIII-D	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|180aa|up_6|NC_011901.1_1916601_1917141_-,NA|434aa|up_1|NC_011901.1_1923425_1924727_+,NA|81aa|up_0|NC_011901.1_1924902_1925145_-,NA|89aa|down_0|NC_011901.1_1926313_1926580_+,NA|107aa|down_1|NC_011901.1_1926609_1926930_+,NA|101aa|down_5|NC_011901.1_1928408_1928711_+,NA|107aa|down_7|NC_011901.1_1929469_1929790_+	NA|286aa|up_9|NC_011901.1_1914213_1915071_+	TIGR02710, conserved_hypothetical_protein, CRISPR-associated protein, TIGR02710 family	NA|108aa|up_8|NC_011901.1_1915067_1915391_+	pfam08960, DUF1874, Domain of unknown function (DUF1874)	csx1|385aa|up_7|NC_011901.1_1915394_1916549_+	pfam09002, DUF1887, Domain of unknown function (DUF1887)	NA|180aa|up_6|NC_011901.1_1916601_1917141_-	NA	cas1|692aa|up_5|NC_011901.1_1917249_1919325_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cas2|95aa|up_4|NC_011901.1_1919328_1919613_+	pfam09827, CRISPR_Cas2, CRISPR associated protein Cas2	NA|241aa|up_3|NC_011901.1_1920638_1921361_+	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	csx1|402aa|up_2|NC_011901.1_1921650_1922856_+	TIGR02221, CRISPR-associated_protein_Csx1_2, CRISPR-associated protein, TM1812 family	NA|434aa|up_1|NC_011901.1_1923425_1924727_+	NA	NA|81aa|up_0|NC_011901.1_1924902_1925145_-	NA	NA|89aa|down_0|NC_011901.1_1926313_1926580_+	NA	NA|107aa|down_1|NC_011901.1_1926609_1926930_+	NA	NA|80aa|down_2|NC_011901.1_1927510_1927750_+	pfam08972, DUF1902, Domain of unknown function (DUF1902)	NA|66aa|down_3|NC_011901.1_1927750_1927948_+	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,	NA|74aa|down_4|NC_011901.1_1928077_1928299_+	pfam02586, SRAP, SOS response associated peptidase (SRAP)	NA|101aa|down_5|NC_011901.1_1928408_1928711_+	NA	NA|141aa|down_6|NC_011901.1_1928761_1929184_+	pfam07238, PilZ, PilZ domain	NA|107aa|down_7|NC_011901.1_1929469_1929790_+	NA	NA|220aa|down_8|NC_011901.1_1929884_1930544_+	PRK00056, mtgA, monofunctional biosynthetic peptidoglycan transglycosylase; Provisional	NA|159aa|down_9|NC_011901.1_1930581_1931058_-	cd06989, cupin_DRT102, Arabidopsis thaliana DRT102 and related proteins, cupin domain
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	7	2046801-2046898	7	CRISPRCasFinder	no	csa3	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Type I-A	CGCCGCTCCGGCAAGGACCGGCG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA,NA|110aa|down_7|NC_011901.1_2051898_2052228_-	NA|343aa|up_9|NC_011901.1_2037438_2038467_-	PRK05331, PRK05331, phosphate acyltransferase PlsX	NA|63aa|up_8|NC_011901.1_2038599_2038788_-	PRK01110, rpmF, 50S ribosomal protein L32; Validated	NA|179aa|up_7|NC_011901.1_2038844_2039381_-	PRK11193, PRK11193, 23S rRNA accumulation protein YceD	NA|473aa|up_6|NC_011901.1_2039533_2040952_+	PRK07178, PRK07178, acetyl-CoA carboxylase biotin carboxylase subunit	NA|610aa|up_5|NC_011901.1_2040968_2042798_+	PRK09282, PRK09282, pyruvate carboxylase subunit B; Validated	NA|199aa|up_4|NC_011901.1_2042794_2043391_+	PRK00884, PRK00884, Maf-like protein; Reviewed	NA|143aa|up_3|NC_011901.1_2043553_2043982_-	pfam00498, FHA, FHA domain	NA|314aa|up_2|NC_011901.1_2044156_2045098_+	cd05292, LDH_2, A subgroup of L-lactate dehydrogenases	NA|291aa|up_1|NC_011901.1_2045275_2046148_+	pfam00520, Ion_trans, Ion transport protein	NA|168aa|up_0|NC_011901.1_2046244_2046748_+	cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)	NA|412aa|down_0|NC_011901.1_2046994_2048230_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|340aa|down_1|NC_011901.1_2048356_2049376_-	PRK08955, PRK08955, glyceraldehyde-3-phosphate dehydrogenase; Validated	csa3|118aa|down_2|NC_011901.1_2049485_2049839_-	PRK10141, PRK10141, DNA-binding transcriptional repressor ArsR; Provisional	NA|78aa|down_3|NC_011901.1_2049928_2050162_-	pfam13192, Thioredoxin_3, Thioredoxin domain	NA|188aa|down_4|NC_011901.1_2050283_2050847_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|180aa|down_5|NC_011901.1_2050861_2051401_-	PRK06193, PRK06193, hypothetical protein; Provisional	NA|132aa|down_6|NC_011901.1_2051482_2051878_-	pfam04134, DUF393, Protein of unknown function, DUF393	NA|110aa|down_7|NC_011901.1_2051898_2052228_-	NA	NA|724aa|down_8|NC_011901.1_2052492_2054664_-	TIGR01389, recQ, ATP-dependent DNA helicase RecQ	NA|194aa|down_9|NC_011901.1_2054660_2055242_-	smart00479, EXOIII, exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	8	2573620-2578230	2,2,8	CRT,PILER-CR,CRISPRCasFinder	no	cas2,cas1,csb2gr5,cas7,cas8u1,cas3,WYL	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Unclear	NGCTTCAATGAGGCCGCGGCTAAATGCCGCGGATGAC,GCTTCAATGAGGCCGCGGCTAAATGCCGCGGATGAC,GCTTCAATGAGGCCGCGGCTAAATGCCGCGGATGAC	37,36,36	0	0	NA	NA	NA:NA:NA	63,62,62	63	Unclear	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|155aa|up_2|NC_011901.1_2570124_2570589_-,NA|118aa|up_1|NC_011901.1_2570624_2570978_-,NA	NA|135aa|up_9|NC_011901.1_2565500_2565905_-	COG0239, CrcB, Integral membrane protein possibly involved in chromosome condensation [Cell division and chromosome partitioning]	NA|128aa|up_8|NC_011901.1_2565910_2566294_-	PRK14203, PRK14203, fluoride efflux transporter CrcB	NA|262aa|up_7|NC_011901.1_2566393_2567179_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|305aa|up_6|NC_011901.1_2567247_2568162_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|124aa|up_5|NC_011901.1_2568398_2568770_-	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin	NA|192aa|up_4|NC_011901.1_2568882_2569458_-	COG2802, COG2802, Uncharacterized protein, similar to the N-terminal domain of Lon protease [General function prediction only]	NA|201aa|up_3|NC_011901.1_2569454_2570057_-	PRK05920, PRK05920, aromatic acid decarboxylase; Validated	NA|155aa|up_2|NC_011901.1_2570124_2570589_-	NA	NA|118aa|up_1|NC_011901.1_2570624_2570978_-	NA	NA|620aa|up_0|NC_011901.1_2571144_2573004_-	cd07409, MPP_CD73_N, CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain	cas2|97aa|down_0|NC_011901.1_2578464_2578755_-	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|571aa|down_1|NC_011901.1_2578760_2580473_-	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	NA|106aa|down_2|NC_011901.1_2580564_2580882_+	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family	NA|114aa|down_3|NC_011901.1_2580881_2581223_+	pfam02452, PemK_toxin, PemK-like, MazF-like toxin of type II toxin-antitoxin system	NA|127aa|down_4|NC_011901.1_2581248_2581629_-	cd18686, PIN_VapC-like, uncharacterized subfamily of the VapC (virulence-associated protein C)-like family of the PIN domain superfamily	NA|69aa|down_5|NC_011901.1_2581625_2581832_-	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	NA|235aa|down_6|NC_011901.1_2581887_2582592_-	COG1948, MUS81, ERCC4-type nuclease [DNA replication, recombination, and repair]	csb2gr5|517aa|down_7|NC_011901.1_2582596_2584147_-	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system	cas7|317aa|down_8|NC_011901.1_2584150_2585101_-	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053)	cas8u1|721aa|down_9|NC_011901.1_2585134_2587297_-	TIGR04113, hypothetical_protein_AaLAA1DRAFT_1703, CRISPR-associated protein Csx17, subtype Dpsyc
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	9	2647801-2647904	9	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	AGCTGCAGAGCGGAGTCGGCGCGGTTCTG	29	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|185aa|up_1|NC_011901.1_2645519_2646074_-,NA|69aa|down_0|NC_011901.1_2648711_2648918_+,NA|63aa|down_1|NC_011901.1_2649171_2649360_+,NA|150aa|down_7|NC_011901.1_2653801_2654251_+,NA|116aa|down_8|NC_011901.1_2654414_2654762_+	NA|179aa|up_9|NC_011901.1_2638503_2639040_+	cd03020, DsbA_DsbC_DsbG, DsbA family, DsbC and DsbG subfamily; V-shaped homodimeric proteins containing a redox active CXXC motif imbedded in a TRX fold	NA|123aa|up_8|NC_011901.1_2639055_2639424_+	cd06981, cupin_reut_a1446, Cupriavidus pinatubonensis reut_a1446 and related proteins, cupin domain	NA|70aa|up_7|NC_011901.1_2639461_2639671_+	pfam11381, DUF3185, Protein of unknown function (DUF3185)	NA|153aa|up_6|NC_011901.1_2640063_2640522_-	COG1416, COG1416, Uncharacterized conserved protein [Function unknown]	NA|62aa|up_5|NC_011901.1_2640709_2640895_+	PRK01642, cls, cardiolipin synthetase; Reviewed	NA|573aa|up_4|NC_011901.1_2641172_2642891_+	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|358aa|up_3|NC_011901.1_2642970_2644044_-	cd02951, SoxW, SoxW family; SoxW is a bacterial periplasmic TRX, containing a redox active CXXC motif, encoded by a genetic locus (sox operon) involved in thiosulfate oxidation	NA|453aa|up_2|NC_011901.1_2644158_2645517_-	PRK15115, PRK15115, response regulator GlrR; Provisional	NA|185aa|up_1|NC_011901.1_2645519_2646074_-	NA	NA|498aa|up_0|NC_011901.1_2646070_2647564_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|69aa|down_0|NC_011901.1_2648711_2648918_+	NA	NA|63aa|down_1|NC_011901.1_2649171_2649360_+	NA	NA|53aa|down_2|NC_011901.1_2649421_2649580_+	COG5487, COG5487, Small integral membrane protein [Function unknown]	NA|182aa|down_3|NC_011901.1_2649955_2650501_+	pfam09831, DUF2058, Uncharacterized protein conserved in bacteria (DUF2058)	NA|233aa|down_4|NC_011901.1_2650508_2651207_+	pfam09335, VTT, VMP1, TMEM41, and TVP38 (VTT) domain	NA|242aa|down_5|NC_011901.1_2651306_2652032_-	cd06217, FNR_iron_sulfur_binding_3, Iron-sulfur binding ferredoxin reductase (FNR) proteins combine the FAD and NAD(P) binding regions of FNR with an iron-sulfur binding cluster domain	NA|188aa|down_6|NC_011901.1_2652996_2653560_-	pfam07437, YfaZ, YfaZ precursor	NA|150aa|down_7|NC_011901.1_2653801_2654251_+	NA	NA|116aa|down_8|NC_011901.1_2654414_2654762_+	NA	NA|151aa|down_9|NC_011901.1_2654850_2655303_+	pfam00034, Cytochrom_C, Cytochrome c
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	10	2915133-2915337	10	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	CGTAGGTCGGCCTTCAGGCCGACA	24	0	0	NA	NA	NA	3	3	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|111aa|up_4|NC_011901.1_2911414_2911747_+,NA|337aa|down_4|NC_011901.1_2921656_2922667_-,NA|94aa|down_6|NC_011901.1_2924644_2924926_+	NA|78aa|up_9|NC_011901.1_2908472_2908706_+	TIGR02449, conserved_hypothetical_protein, TIGR02449 family protein	NA|105aa|up_8|NC_011901.1_2908702_2909017_+	pfam05164, ZapA, Cell division protein ZapA	NA|201aa|up_7|NC_011901.1_2909402_2910005_+	TIGR02727, Uncharacterized_protein_YqgN, 5,10-methenyltetrahydrofolate synthetase	NA|153aa|up_6|NC_011901.1_2910262_2910721_+	COG2947, COG2947, Uncharacterized conserved protein [Function unknown]	NA|226aa|up_5|NC_011901.1_2910717_2911395_+	pfam13417, GST_N_3, Glutathione S-transferase, N-terminal domain	NA|111aa|up_4|NC_011901.1_2911414_2911747_+	NA	NA|137aa|up_3|NC_011901.1_2911919_2912330_+	PRK14900, valS, valyl-tRNA synthetase; Provisional	NA|507aa|up_2|NC_011901.1_2912454_2913975_-	PRK09224, PRK09224, threonine ammonia-lyase IlvA	NA|219aa|up_1|NC_011901.1_2914123_2914780_+	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA	NA|67aa|up_0|NC_011901.1_2914902_2915103_+	pfam11146, DUF2905, Protein of unknown function (DUF2905)	NA|150aa|down_0|NC_011901.1_2915357_2915807_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|1290aa|down_1|NC_011901.1_2915956_2919826_-	pfam12447, DUF3683, Protein of unknown function (DUF3683)	NA|89aa|down_2|NC_011901.1_2920065_2920332_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|77aa|down_3|NC_011901.1_2920315_2920546_-	COG4710, COG4710, Predicted DNA-binding protein with an HTH domain [General function prediction only]	NA|337aa|down_4|NC_011901.1_2921656_2922667_-	NA	NA|355aa|down_5|NC_011901.1_2923164_2924229_-	pfam13609, Porin_4, Gram-negative porin	NA|94aa|down_6|NC_011901.1_2924644_2924926_+	NA	NA|95aa|down_7|NC_011901.1_2924928_2925213_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|340aa|down_8|NC_011901.1_2925346_2926366_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane	NA|117aa|down_9|NC_011901.1_2927379_2927730_+	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	11	2927782-2927879	11	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	CGCCGATTCACTCCCGGCGAATCGGT	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|337aa|up_5|NC_011901.1_2921656_2922667_-,NA|94aa|up_3|NC_011901.1_2924644_2924926_+,NA	NA|150aa|up_9|NC_011901.1_2915357_2915807_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|1290aa|up_8|NC_011901.1_2915956_2919826_-	pfam12447, DUF3683, Protein of unknown function (DUF3683)	NA|89aa|up_7|NC_011901.1_2920065_2920332_-	COG2026, RelE, Cytotoxic translational repressor of toxin-antitoxin stability system [Translation, ribosomal structure and biogenesis / Cell division and chromosome partitioning]	NA|77aa|up_6|NC_011901.1_2920315_2920546_-	COG4710, COG4710, Predicted DNA-binding protein with an HTH domain [General function prediction only]	NA|337aa|up_5|NC_011901.1_2921656_2922667_-	NA	NA|355aa|up_4|NC_011901.1_2923164_2924229_-	pfam13609, Porin_4, Gram-negative porin	NA|94aa|up_3|NC_011901.1_2924644_2924926_+	NA	NA|95aa|up_2|NC_011901.1_2924928_2925213_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|340aa|up_1|NC_011901.1_2925346_2926366_-	cd00342, gram_neg_porins, Porins form aqueous channels for the diffusion of small hydrophillic molecules across the outer membrane	NA|117aa|up_0|NC_011901.1_2927379_2927730_+	TIGR02607, Virulence-associated_protein_I, addiction module antidote protein, HigA family	NA|119aa|down_0|NC_011901.1_2928233_2928590_-	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|131aa|down_1|NC_011901.1_2928655_2929048_-	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed	NA|143aa|down_2|NC_011901.1_2929107_2929536_-	PRK09216, rplM, 50S ribosomal protein L13; Reviewed	NA|102aa|down_3|NC_011901.1_2930047_2930353_-	COG3411, COG3411, Ferredoxin [Energy production and conversion]	NA|254aa|down_4|NC_011901.1_2930375_2931137_-	pfam04338, DUF481, Protein of unknown function, DUF481	NA|418aa|down_5|NC_011901.1_2931186_2932440_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|214aa|down_6|NC_011901.1_2932503_2933145_+	cd01042, DMQH, Demethoxyubiquinone hydroxylase, ferritin-like diiron-binding domain	NA|271aa|down_7|NC_011901.1_2933329_2934142_-	PRK05462, PRK05462, adenosylmethionine decarboxylase	NA|135aa|down_8|NC_011901.1_2934204_2934609_-	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	NA|150aa|down_9|NC_011901.1_2934605_2935055_-	PRK10738, PRK10738, OsmC family protein
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	12	3188121-3188239	12	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	GGGCTCGGTTTGGGACACCCATC	23	0	0	NA	NA	NA	2	2	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|129aa|up_2|NC_011901.1_3184912_3185299_+,NA|571aa|up_1|NC_011901.1_3185482_3187195_+,NA|230aa|up_0|NC_011901.1_3187244_3187934_+,NA	NA|386aa|up_9|NC_011901.1_3172682_3173840_+	PRK01286, PRK01286, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|507aa|up_8|NC_011901.1_3173836_3175357_+	PRK11901, PRK11901, hypothetical protein; Reviewed	NA|1486aa|up_7|NC_011901.1_3175612_3180070_+	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|458aa|up_6|NC_011901.1_3180147_3181521_+	PRK05667, dnaG, DNA primase; Validated	NA|138aa|up_5|NC_011901.1_3181517_3181931_+	pfam08278, DnaG_DnaB_bind, DNA primase DnaG DnaB-binding	NA|620aa|up_4|NC_011901.1_3182020_3183880_+	PRK05658, PRK05658, RNA polymerase sigma factor RpoD; Validated	NA|221aa|up_3|NC_011901.1_3184121_3184784_+	sd00044, HEAT, HEAT repeats	NA|129aa|up_2|NC_011901.1_3184912_3185299_+	NA	NA|571aa|up_1|NC_011901.1_3185482_3187195_+	NA	NA|230aa|up_0|NC_011901.1_3187244_3187934_+	NA	NA|259aa|down_0|NC_011901.1_3188285_3189062_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|389aa|down_1|NC_011901.1_3190509_3191676_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|293aa|down_2|NC_011901.1_3191734_3192613_-	pfam08668, HDOD, HDOD domain	NA|242aa|down_3|NC_011901.1_3192823_3193549_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|262aa|down_4|NC_011901.1_3193705_3194491_+	pfam09955, DUF2189, Predicted integral membrane protein (DUF2189)	NA|92aa|down_5|NC_011901.1_3194558_3194834_-	pfam07238, PilZ, PilZ domain	NA|107aa|down_6|NC_011901.1_3195107_3195428_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|432aa|down_7|NC_011901.1_3195441_3196737_+	pfam09242, FCSD-flav_bind, Flavocytochrome c sulphide dehydrogenase, flavin-binding	NA|69aa|down_8|NC_011901.1_3196832_3197039_-	COG5481, COG5481, Uncharacterized conserved small protein containing a coiled-coil domain [Function unknown]	NA|272aa|down_9|NC_011901.1_3197073_3197889_-	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]
GCF_000021985.1_ASM2198v1	NC_011901	Thioalkalivibrio sulfidiphilus HL-EbGr7, complete sequence	13	3224116-3224238	13	CRISPRCasFinder	no		cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	Orphan	GCGCATTCGCGCACTGTCAGATTGGCCTTCCTGCCAACCT	40	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,DinG,RT,WYL,csx1,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,cas1,cas2,PD-DExK,csa3,cas6,csb2gr5,cas7,cas8u1	NA|144aa|up_8|NC_011901.1_3216483_3216915_-,NA|396aa|up_6|NC_011901.1_3218194_3219382_+,NA	NA|227aa|up_9|NC_011901.1_3215708_3216389_-	pfam04298, Zn_peptidase_2, Putative neutral zinc metallopeptidase	NA|144aa|up_8|NC_011901.1_3216483_3216915_-	NA	NA|360aa|up_7|NC_011901.1_3217068_3218148_+	PRK09375, PRK09375, quinolinate synthase NadA	NA|396aa|up_6|NC_011901.1_3218194_3219382_+	NA	NA|415aa|up_5|NC_011901.1_3219488_3220733_-	cd03586, PolY_Pol_IV_kappa, DNA Polymerase IV/Kappa	NA|198aa|up_4|NC_011901.1_3220739_3221333_-	PRK00215, PRK00215, transcriptional repressor LexA	NA|169aa|up_3|NC_011901.1_3221408_3221915_-	pfam04940, BLUF, Sensors of blue-light using FAD	NA|282aa|up_2|NC_011901.1_3222026_3222872_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|113aa|up_1|NC_011901.1_3222979_3223318_+	pfam04358, DsrC, DsrC like protein	NA|148aa|up_0|NC_011901.1_3223539_3223983_-	pfam06695, Sm_multidrug_ex, Putative small multi-drug export protein	NA|333aa|down_0|NC_011901.1_3225009_3226008_+	pfam00487, FA_desaturase, Fatty acid desaturase	NA|281aa|down_1|NC_011901.1_3226024_3226867_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]	NA|327aa|down_2|NC_011901.1_3227251_3228232_+	cd13563, PBP2_SsuA_like_6, Putative substrate binding domain of sulfonate binding protein-like, a member of the type 2 periplasmic binding protein fold	NA|320aa|down_3|NC_011901.1_3228273_3229233_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|307aa|down_4|NC_011901.1_3229250_3230171_+	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters	NA|262aa|down_5|NC_011901.1_3230170_3230956_+	pfam02633, Creatininase, Creatinine amidohydrolase	NA|456aa|down_6|NC_011901.1_3230957_3232325_+	TIGR03105, gln_synth_III, glutamine synthetase, type III	NA|151aa|down_7|NC_011901.1_3232334_3232787_+	PRK04460, PRK04460, nickel-responsive transcriptional regulator NikR	NA|245aa|down_8|NC_011901.1_3232965_3233700_+	TIGR03425, urea_degr_2, urea carboxylase-associated protein 2	NA|216aa|down_9|NC_011901.1_3233722_3234370_+	TIGR03424, urea_degr_1, urea carboxylase-associated protein 1
