assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000021905.1_ASM2190v1	NC_011768	Desulfatibacillum aliphaticivorans, complete sequence	1	1955757-1955876	1	CRISPRCasFinder	no		csa3,cas3,PrimPol,RT,cas3HD,Cas9_archaeal,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	Orphan	CGTGTGGTTGCGAGGTCTCCTCGCCCG	27	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,PrimPol,RT,cas3HD,Cas9_archaeal,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	NA|309aa|up_9|NC_011768.1_1930375_1931302_-,NA|146aa|down_0|NC_011768.1_1956994_1957432_-,NA|104aa|down_1|NC_011768.1_1958413_1958725_-,NA|243aa|down_2|NC_011768.1_1960750_1961479_-	NA|309aa|up_9|NC_011768.1_1930375_1931302_-	NA	NA|252aa|up_8|NC_011768.1_1931298_1932054_-	cd01521, RHOD_PspE2, Member of the Rhodanese Homology Domain superfamily	NA|1320aa|up_7|NC_011768.1_1932053_1936013_-	TIGR04275, beta_prop_Msarc, beta propeller repeat, Methanosarcina surface protein type	NA|3685aa|up_6|NC_011768.1_1936009_1947064_-	cd00081, Hint, Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e	NA|129aa|up_5|NC_011768.1_1947463_1947850_+	pfam12680, SnoaL_2, SnoaL-like domain	NA|832aa|up_4|NC_011768.1_1948537_1951033_-	cd01677, PFL2_DhaB_BssA, Pyruvate formate lyase 2 and related enzymes	NA|248aa|up_3|NC_011768.1_1951257_1952001_-	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons	NA|263aa|up_2|NC_011768.1_1952002_1952791_-	COG2186, FadR, Transcriptional regulators [Transcription]	NA|424aa|up_1|NC_011768.1_1953011_1954283_-	PRK11360, PRK11360, two-component system sensor histidine kinase AtoS	NA|388aa|up_0|NC_011768.1_1954266_1955430_-	cd17814, Fe-ADH-like, iron-containing alcohol dehydrogenases (Fe-ADH)-like	NA|146aa|down_0|NC_011768.1_1956994_1957432_-	NA	NA|104aa|down_1|NC_011768.1_1958413_1958725_-	NA	NA|243aa|down_2|NC_011768.1_1960750_1961479_-	NA	NA|2059aa|down_3|NC_011768.1_1961468_1967645_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|292aa|down_4|NC_011768.1_1968016_1968892_+	TIGR01207, Glucose-1-phosphate_thymidylyltransferase_1, glucose-1-phosphate thymidylyltransferase, short form	NA|185aa|down_5|NC_011768.1_1968903_1969458_+	cd00438, cupin_RmlC, RmlC carbohydrate epimerase, involved in dTDP-L-rhamnose production	NA|469aa|down_6|NC_011768.1_1969631_1971038_+	TIGR01479, Mannose-1-phosphate_guanylyltransferase, mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA|336aa|down_7|NC_011768.1_1971098_1972106_+	cd02874, GH18_CFLE_spore_hydrolase, Cortical fragment-lytic enzyme (CFLE) is a peptidoglycan hydrolase involved in  bacterial endospore germination	NA|283aa|down_8|NC_011768.1_1972181_1973030_+	cd07987, LPLAT_MGAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: MGAT-like	NA|149aa|down_9|NC_011768.1_1973242_1973689_+	pfam08821, CGGC, CGGC domain
GCF_000021905.1_ASM2190v1	NC_011768	Desulfatibacillum aliphaticivorans, complete sequence	2	4348311-4348491	2	CRISPRCasFinder	no		csa3,cas3,PrimPol,RT,cas3HD,Cas9_archaeal,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	Orphan	GGACGGAGACGGCGTGGGCGACGAATGCGATAACTGCCCTTCC	43	0	0	NA	NA	NA	2	2	Orphan	csa3,cas3,PrimPol,RT,cas3HD,Cas9_archaeal,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	NA,NA|101aa|down_0|NC_011768.1_4350954_4351257_-	NA|450aa|up_9|NC_011768.1_4333248_4334598_-	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|187aa|up_8|NC_011768.1_4334655_4335216_-	pfam01047, MarR, MarR family	NA|380aa|up_7|NC_011768.1_4335489_4336629_+	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|230aa|up_6|NC_011768.1_4336667_4337357_-	pfam13481, AAA_25, AAA domain	NA|698aa|up_5|NC_011768.1_4337482_4339576_-	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|136aa|up_4|NC_011768.1_4340480_4340888_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|244aa|up_3|NC_011768.1_4341065_4341797_+	COG0247, GlpC, Fe-S oxidoreductase [Energy production and conversion]	NA|479aa|up_2|NC_011768.1_4341808_4343245_+	COG1139, COG1139, Uncharacterized conserved protein containing a ferredoxin-like domain [Energy production and conversion]	NA|224aa|up_1|NC_011768.1_4343259_4343931_+	pfam02589, LUD_dom, LUD domain	NA|144aa|up_0|NC_011768.1_4344352_4344784_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|101aa|down_0|NC_011768.1_4350954_4351257_-	NA	NA|274aa|down_1|NC_011768.1_4351310_4352132_-	sd00006, TPR, Tetratricopeptide repeat	NA|105aa|down_2|NC_011768.1_4352324_4352639_+	pfam03091, CutA1, CutA1 divalent ion tolerance protein	NA|296aa|down_3|NC_011768.1_4352726_4353614_+	pfam12146, Hydrolase_4, Serine aminopeptidase, S33	NA|285aa|down_4|NC_011768.1_4353764_4354619_+	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|110aa|down_5|NC_011768.1_4354645_4354975_-	pfam13744, HTH_37, Helix-turn-helix domain	NA|108aa|down_6|NC_011768.1_4354967_4355291_-	COG4679, COG4679, Phage-related protein [Function unknown]	NA|863aa|down_7|NC_011768.1_4355509_4358098_-	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB	NA|254aa|down_8|NC_011768.1_4358285_4359047_+	cd16272, RNaseZ_MBL-fold, Ribonuclease Z; MBL-fold metallo-hydrolase domain	NA|231aa|down_9|NC_011768.1_4359046_4359739_+	COG1648, CysG, Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
GCF_000021905.1_ASM2190v1	NC_011768	Desulfatibacillum aliphaticivorans, complete sequence	3	5538541-5538643	3	CRISPRCasFinder	no	Cas9_archaeal	csa3,cas3,PrimPol,RT,cas3HD,Cas9_archaeal,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	 or Type II-C?, Type II-B,Type II-A	CGAGGTCCCCCCGCTCGTAGTTGCGAGGTCCCC	33	1	1	5538574-5538610	NC_011768.1_5538644-5538680	NA	1	1	orTypeII-C?,TypeII-B,TypeII-A	csa3,cas3,PrimPol,RT,cas3HD,Cas9_archaeal,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	NA,NA|306aa|down_0|NC_011768.1_5539252_5540170_-	NA|253aa|up_9|NC_011768.1_5523983_5524742_-	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|162aa|up_8|NC_011768.1_5525204_5525690_-	COG0716, FldA, Flavodoxins [Energy production and conversion]	NA|216aa|up_7|NC_011768.1_5525692_5526340_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|643aa|up_6|NC_011768.1_5526528_5528457_+	COG4715, COG4715, Uncharacterized conserved protein [Function unknown]	NA|591aa|up_5|NC_011768.1_5528500_5530273_+	pfam01757, Acyl_transf_3, Acyltransferase family	NA|1072aa|up_4|NC_011768.1_5530447_5533663_+	PRK13557, PRK13557, histidine kinase; Provisional	NA|406aa|up_3|NC_011768.1_5533682_5534900_-	cd06180, MFS_YjiJ, Uncharacterized protein YjiJ and similar proteins of the Major Facilitator Superfamily of transporters	NA|212aa|up_2|NC_011768.1_5534972_5535608_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|294aa|up_1|NC_011768.1_5535815_5536697_+	COG1073, COG1073, Hydrolases of the alpha/beta superfamily [General function prediction only]	NA|169aa|up_0|NC_011768.1_5537181_5537688_-	COG1592, COG1592, Rubrerythrin [Energy production and conversion]	NA|306aa|down_0|NC_011768.1_5539252_5540170_-	NA	NA|334aa|down_1|NC_011768.1_5541248_5542250_+	cd13665, PBP2_TRAP_Dctp3_4, Periplasmic substrate-binding component of TRAP-type C4-dicarboxylate transport system DctP3 and DctP4; the type 2 periplasmic-binding protein fold	NA|162aa|down_2|NC_011768.1_5542280_5542766_+	pfam04290, DctQ, Tripartite ATP-independent periplasmic transporters, DctQ component	NA|434aa|down_3|NC_011768.1_5542762_5544064_+	COG1593, DctQ, TRAP-type C4-dicarboxylate transport system, large permease component [Carbohydrate transport and metabolism]	NA|269aa|down_4|NC_011768.1_5544197_5545004_+	pfam02405, MlaE, Permease MlaE	NA|405aa|down_5|NC_011768.1_5545010_5546225_+	cd03261, ABC_Org_Solvent_Resistant, ATP-binding cassette transport system involved in resistant to organic solvents	NA|149aa|down_6|NC_011768.1_5546237_5546684_+	TIGR04430, OM_asym_MlaD, outer membrane lipid asymmetry maintenance protein MlaD	NA|199aa|down_7|NC_011768.1_5546736_5547333_+	pfam05494, MlaC, MlaC protein	NA|257aa|down_8|NC_011768.1_5547362_5548133_+	pfam04333, MlaA, MlaA lipoprotein	Cas9_archaeal|112aa|down_9|NC_011768.1_5548250_5548586_+	pfam14279, HNH_5, HNH endonuclease
GCF_000021905.1_ASM2190v1	NC_011768	Desulfatibacillum aliphaticivorans, complete sequence	4	6093236-6097299	1,4,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	csa3,cas3,PrimPol,RT,cas3HD,Cas9_archaeal,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	Type I-E	GTCTTCCCCACGCCCGTGGGGGTGTTTC,GTCTTCCCCACGCCCGTGGGGGTGTTTCT,GTCTTCCCCACGCCCGTGGGGGTGTTTCT	28,29,29	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	65,66,66	66	TypeI-E	csa3,cas3,PrimPol,RT,cas3HD,Cas9_archaeal,WYL,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	NA,NA|128aa|down_2|NC_011768.1_6098764_6099148_+,NA|96aa|down_6|NC_011768.1_6102802_6103090_-,NA|370aa|down_7|NC_011768.1_6103111_6104221_-	NA|289aa|up_9|NC_011768.1_6081895_6082762_+	pfam13148, DUF3987, Protein of unknown function (DUF3987)	WYL|341aa|up_8|NC_011768.1_6083853_6084876_+	pfam13280, WYL, WYL domain	cas3|852aa|up_7|NC_011768.1_6084902_6087458_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|495aa|up_6|NC_011768.1_6087502_6088987_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|174aa|up_5|NC_011768.1_6089038_6089560_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|200aa|up_4|NC_011768.1_6089534_6090134_+	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI	cas7|384aa|up_3|NC_011768.1_6090165_6091317_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|241aa|up_2|NC_011768.1_6091309_6092032_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|287aa|up_1|NC_011768.1_6092035_6092896_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|98aa|up_0|NC_011768.1_6092897_6093191_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|160aa|down_0|NC_011768.1_6097310_6097790_+	TIGR02653, putative_ATP-dependent_Lon_protease, conserved hypothetical protein	NA|222aa|down_1|NC_011768.1_6097844_6098510_+	TIGR02653, putative_ATP-dependent_Lon_protease, conserved hypothetical protein	NA|128aa|down_2|NC_011768.1_6098764_6099148_+	NA	NA|394aa|down_3|NC_011768.1_6099272_6100454_-	cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine	NA|170aa|down_4|NC_011768.1_6101159_6101669_-	pfam11696, DUF3292, Protein of unknown function (DUF3292)	NA|301aa|down_5|NC_011768.1_6101625_6102528_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|96aa|down_6|NC_011768.1_6102802_6103090_-	NA	NA|370aa|down_7|NC_011768.1_6103111_6104221_-	NA	NA|231aa|down_8|NC_011768.1_6104653_6105346_-	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism]	NA|274aa|down_9|NC_011768.1_6105542_6106364_-	cd01011, nicotinamidase, Nicotinamidase/pyrazinamidase (PZase)
