The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012582	Vibrio cholerae O395 chromosome I, complete sequence	3024078	584553	591777	3024078		uncultured_Mediterranean_phage(33.33%)	6	NA	NA
WP_000698379.1|584553_585306_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	53.3	8.0e-69
WP_000002982.1|585298_585925_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.1	2.0e-36
WP_000177568.1|585924_586860_+	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	34.7	7.8e-05
WP_000116738.1|586933_587941_+	RNA polymerase sigma factor RpoS	NA	F4YCU2	Synechococcus_phage	34.2	6.0e-35
WP_001894770.1|588033_590622_-	DNA mismatch repair protein MutS	NA	A0A1V0SC35	Catovirus	23.0	2.2e-33
WP_001279365.1|590889_591777_-	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	41.1	4.1e-56
>prophage 2
NC_012582	Vibrio cholerae O395 chromosome I, complete sequence	3024078	823331	830524	3024078		Faustovirus(16.67%)	9	NA	NA
WP_000775253.1|823331_824546_+	IscS subfamily cysteine desulfurase	NA	A0A0H3TPH2	Faustovirus	30.5	1.1e-32
WP_000331703.1|824582_824966_+	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	78.2	5.4e-53
WP_000301571.1|825026_825350_+	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	50.5	3.0e-25
WP_001105747.1|825398_825914_+	co-chaperone HscB	NA	NA	NA	NA	NA
WP_001196560.1|825937_827788_+	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	41.1	5.3e-106
WP_001124187.1|827801_828140_+	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
WP_000872176.1|828188_828383_+	Fe-S cluster assembly protein IscX	NA	NA	NA	NA	NA
WP_000107236.1|828602_829892_+	aminopeptidase PepB	NA	Q6GYZ8	Mycoplasma_phage	34.0	4.9e-34
WP_001162850.1|830095_830524_+	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	38.4	1.0e-20
>prophage 3
NC_012582	Vibrio cholerae O395 chromosome I, complete sequence	3024078	1208313	1331004	3024078	transposase,protease,tail,tRNA,plate,head	Vibrio_phage(84.38%)	152	NA	NA
WP_000821682.1|1208313_1209177_+|protease	protease HtpX	protease	NA	NA	NA	NA
WP_000383061.1|1209395_1209815_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_000127634.1|1209811_1210537_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_000684176.1|1210550_1211828_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_001145047.1|1211827_1212637_+	DUF1365 domain-containing protein	NA	NA	NA	NA	NA
WP_000935148.1|1212626_1213868_+	class I SAM-dependent methyltransferase	NA	A0A2K9L4K8	Tupanvirus	33.6	4.2e-46
WP_001229555.1|1213870_1214410_+	DUF2878 domain-containing protein	NA	NA	NA	NA	NA
WP_000881186.1|1214372_1214909_+	chalcone isomerase family protein	NA	NA	NA	NA	NA
WP_001234232.1|1214905_1215433_+	DUF3833 domain-containing protein	NA	NA	NA	NA	NA
WP_000423489.1|1215523_1216894_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.5	6.7e-114
WP_001262240.1|1216951_1217569_-	high frequency lysogenization protein HflD	NA	NA	NA	NA	NA
WP_000109998.1|1217591_1218707_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_000671609.1|1218970_1220275_+	inosine/guanosine kinase	NA	NA	NA	NA	NA
WP_001285966.1|1220562_1221300_-	transcriptional regulator	NA	A0A2I7S9A5	Vibrio_phage	60.7	4.3e-83
WP_000373567.1|1221452_1221677_+	helix-turn-helix domain-containing protein	NA	M1PVU4	Vibrio_phage	61.9	2.3e-16
WP_000270200.1|1221688_1223692_+|transposase	Mu transposase C-terminal domain-containing protein	transposase	A0A2I7S9A8	Vibrio_phage	69.8	4.2e-274
WP_000800334.1|1223718_1224663_+	AAA family ATPase	NA	M4M9P4	Vibrio_phage	73.7	1.1e-126
WP_000157297.1|1224670_1224895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000065387.1|1224904_1225345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001032751.1|1225354_1225720_+	hypothetical protein	NA	M4MB90	Vibrio_phage	60.6	6.9e-26
WP_001096736.1|1225694_1225889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001192102.1|1225875_1226490_+	DUF3164 family protein	NA	M4MHH7	Vibrio_phage	79.6	2.0e-86
WP_000512066.1|1226499_1226772_+	hypothetical protein	NA	A0A2I7S9G2	Vibrio_phage	62.4	1.7e-21
WP_000551394.1|1226764_1227007_+	hypothetical protein	NA	M4MCS5	Vibrio_phage	60.8	9.3e-19
WP_000414667.1|1226990_1227188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001292533.1|1227184_1227655_+	hypothetical protein	NA	M4MHH2	Vibrio_phage	62.2	2.2e-48
WP_000762331.1|1227651_1228182_+	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	42.9	2.2e-28
WP_000466684.1|1228261_1228495_+	hypothetical protein	NA	M4M9N5	Vibrio_phage	67.5	8.3e-25
WP_000581642.1|1228512_1228698_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_000040558.1|1228708_1229287_+	regulatory protein GemA	NA	A0A2I7S9B8	Vibrio_phage	59.3	8.6e-55
WP_000158209.1|1229273_1229522_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001029054.1|1229600_1230017_+	positive regulator of late transcription	NA	M4MHG9	Vibrio_phage	50.0	1.8e-30
WP_000493681.1|1230101_1230650_+	N-acetylmuramidase	NA	A0A2I7S9B9	Vibrio_phage	72.7	1.9e-72
WP_000828643.1|1230649_1230940_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001121000.1|1230915_1231512_+	hypothetical protein	NA	M4MB79	Vibrio_phage	58.6	7.3e-49
WP_001281318.1|1231508_1231739_+	TraR/DksA C4-type zinc finger protein	NA	M4MHG5	Vibrio_phage	63.2	1.1e-18
WP_000362982.1|1231738_1232038_+	DUF2730 family protein	NA	M1Q558	Vibrio_phage	71.0	2.9e-30
WP_000008606.1|1232046_1232337_+	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	82.3	3.9e-40
WP_001195536.1|1232348_1232930_+	DUF3486 family protein	NA	M4MCR3	Vibrio_phage	69.5	4.6e-64
WP_001105346.1|1232930_1234496_+	hypothetical protein	NA	M4MHG0	Vibrio_phage	77.6	1.9e-229
WP_000027036.1|1234492_1236052_+	DUF935 domain-containing protein	NA	M4M9P3	Vibrio_phage	75.9	4.2e-229
WP_001125593.1|1236044_1236818_+	hypothetical protein	NA	M1PVV7	Vibrio_phage	75.1	2.9e-114
WP_000246045.1|1236829_1237078_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000638752.1|1237074_1237587_+	hypothetical protein	NA	A0A0F6N5P8	Escherichia_phage	45.6	4.1e-32
WP_000638761.1|1237583_1238219_+	hypothetical protein	NA	A0A1V0E8A2	Vibrio_phage	47.3	1.7e-40
WP_001249578.1|1238218_1238503_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001218332.1|1239793_1240693_+|head	Mu-like prophage major head subunit gpT family protein	head	M4MB71	Vibrio_phage	83.1	5.5e-149
WP_000004757.1|1240759_1241335_+	hypothetical protein	NA	M4M9M3	Vibrio_phage	54.5	4.0e-20
WP_001029276.1|1241340_1241775_+	DUF1320 domain-containing protein	NA	A0A2I7S9E9	Vibrio_phage	88.2	9.6e-67
WP_000513476.1|1241774_1242317_+	phage virion morphogenesis protein	NA	A0A2I7S9D7	Vibrio_phage	73.7	4.3e-72
WP_000100986.1|1242313_1242913_+	hypothetical protein	NA	M4MHF0	Vibrio_phage	60.7	2.4e-68
WP_000437436.1|1242926_1243127_+	DUF2635 domain-containing protein	NA	A0A2I7S9K4	Vibrio_phage	43.5	2.6e-06
WP_001173614.1|1243129_1244614_+|tail	phage tail sheath subtilisin-like domain-containing protein	tail	M1Q565	Vibrio_phage	71.7	6.2e-206
WP_000024431.1|1244628_1244982_+|tail	phage tail tube protein	tail	A0A2I7S9D5	Vibrio_phage	71.8	1.1e-44
WP_000996595.1|1244981_1245326_+|tail	phage tail assembly protein	tail	M4MB64	Vibrio_phage	80.5	2.4e-44
WP_000068600.1|1245451_1247203_+	hypothetical protein	NA	M4MHE6	Vibrio_phage	62.8	3.6e-189
WP_000863378.1|1247214_1248534_+	DNA circularization N-terminal domain-containing protein	NA	A0A2I7S9E8	Vibrio_phage	68.0	6.6e-167
WP_001286434.1|1248526_1249603_+	hypothetical protein	NA	M4M9L5	Vibrio_phage	75.6	1.8e-159
WP_044019770.1|1249632_1250214_+|plate	phage baseplate assembly protein V	plate	M4MCP6	Vibrio_phage	73.2	5.4e-73
WP_000095017.1|1250216_1250666_+	phage GP46 family protein	NA	M4MB61	Vibrio_phage	73.6	1.5e-54
WP_001147108.1|1250655_1251723_+|plate	baseplate J/gp47 family protein	plate	A0A2I7S9E5	Vibrio_phage	72.1	9.4e-148
WP_000510158.1|1251707_1252295_+	DUF2313 domain-containing protein	NA	A0A2I7S9L6	Vibrio_phage	79.0	1.4e-92
WP_000549338.1|1252294_1253533_+	hypothetical protein	NA	H9C145	Vibrio_phage	83.0	2.6e-181
WP_001065601.1|1253532_1254072_+	hypothetical protein	NA	H9C146	Vibrio_phage	50.4	2.3e-25
WP_001290200.1|1254188_1254596_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_001048829.1|1255289_1256891_+	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
WP_001194704.1|1257299_1258196_+	ATP phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_001261315.1|1258200_1259496_+	histidinol dehydrogenase	NA	NA	NA	NA	NA
WP_000412889.1|1259499_1260540_+	histidinol-phosphate transaminase	NA	NA	NA	NA	NA
WP_000043567.1|1260591_1261665_+	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
WP_000193249.1|1261664_1262276_+	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
WP_000586511.1|1262318_1263056_+	1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase	NA	A0A2H4UVM0	Bodo_saltans_virus	22.6	9.5e-06
WP_000880146.1|1263037_1263811_+	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA	NA
WP_001067502.1|1263807_1264440_+	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA	NA
WP_000098720.1|1264640_1265366_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_001142855.1|1265673_1267899_+	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_000190603.1|1267997_1268219_-	cold shock domain-containing protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	58.2	9.7e-15
WP_000041728.1|1268691_1269012_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	39.5	1.3e-12
WP_000932415.1|1269050_1271321_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.8	6.6e-167
WP_001018084.1|1271389_1273066_-	aspartate:alanine antiporter	NA	NA	NA	NA	NA
WP_000498418.1|1273267_1273531_-	GrxA family glutaredoxin	NA	A0A2I7SAE2	Vibrio_phage	70.5	2.9e-26
WP_000486145.1|1273839_1275087_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA	NA
WP_001093848.1|1275177_1276032_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000253201.1|1276339_1277986_-	putative pyridoxal-dependent aspartate 1-decarboxylase	NA	S4W1T5	Pandoravirus	27.3	2.3e-20
WP_000826868.1|1278095_1278605_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000948497.1|1278793_1279699_-	lysine exporter LysO family protein	NA	NA	NA	NA	NA
WP_000019000.1|1279719_1280640_-	HDOD domain-containing protein	NA	A0A1C3NFB0	Phage_NCTB	21.9	1.3e-07
WP_001005366.1|1281017_1281605_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_001232643.1|1281700_1282249_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001031964.1|1282439_1282937_-	response regulator	NA	NA	NA	NA	NA
WP_001082992.1|1282933_1284889_-	cyclic nucleotide-binding domain-containing protein	NA	NA	NA	NA	NA
WP_000835928.1|1285111_1286377_+	YdgA family protein	NA	NA	NA	NA	NA
WP_000400868.1|1286498_1287593_+	3-phosphoserine/phosphohydroxythreonine transaminase	NA	M1Q1P2	Streptococcus_phage	47.0	3.9e-88
WP_000506955.1|1287673_1288663_-	alpha-L-glutamate ligase-like protein	NA	NA	NA	NA	NA
WP_000202050.1|1288662_1290171_-	inactive transglutaminase family protein	NA	NA	NA	NA	NA
WP_000476327.1|1290179_1290917_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_000481534.1|1291036_1292008_-|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	tRNA	NA	NA	NA	NA
WP_001068374.1|1292119_1292848_-	carboxy-S-adenosyl-L-methionine synthase CmoA	NA	NA	NA	NA	NA
WP_001880947.1|1292985_1293855_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_001256500.1|1294146_1295922_+|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	22.8	8.4e-08
WP_001880948.1|1296018_1296597_+	thymidine kinase	NA	A0A1Z1LZ42	Serratia_phage	56.0	1.2e-56
WP_001065601.1|1297494_1298034_-	hypothetical protein	NA	H9C146	Vibrio_phage	50.4	2.3e-25
WP_000549338.1|1298033_1299272_-	hypothetical protein	NA	H9C145	Vibrio_phage	83.0	2.6e-181
WP_000510158.1|1299271_1299859_-	DUF2313 domain-containing protein	NA	A0A2I7S9L6	Vibrio_phage	79.0	1.4e-92
WP_001147108.1|1299843_1300911_-|plate	baseplate J/gp47 family protein	plate	A0A2I7S9E5	Vibrio_phage	72.1	9.4e-148
WP_000095017.1|1300900_1301350_-	phage GP46 family protein	NA	M4MB61	Vibrio_phage	73.6	1.5e-54
WP_044019770.1|1301352_1301934_-|plate	phage baseplate assembly protein V	plate	M4MCP6	Vibrio_phage	73.2	5.4e-73
WP_001286434.1|1301963_1303040_-	hypothetical protein	NA	M4M9L5	Vibrio_phage	75.6	1.8e-159
WP_000863378.1|1303032_1304352_-	DNA circularization N-terminal domain-containing protein	NA	A0A2I7S9E8	Vibrio_phage	68.0	6.6e-167
WP_000068600.1|1304363_1306115_-	hypothetical protein	NA	M4MHE6	Vibrio_phage	62.8	3.6e-189
WP_000996595.1|1306240_1306585_-|tail	phage tail assembly protein	tail	M4MB64	Vibrio_phage	80.5	2.4e-44
WP_000024431.1|1306584_1306938_-|tail	phage tail tube protein	tail	A0A2I7S9D5	Vibrio_phage	71.8	1.1e-44
WP_001173614.1|1306952_1308437_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	M1Q565	Vibrio_phage	71.7	6.2e-206
WP_000437436.1|1308439_1308640_-	DUF2635 domain-containing protein	NA	A0A2I7S9K4	Vibrio_phage	43.5	2.6e-06
WP_000100986.1|1308653_1309253_-	hypothetical protein	NA	M4MHF0	Vibrio_phage	60.7	2.4e-68
WP_000513476.1|1309249_1309792_-	phage virion morphogenesis protein	NA	A0A2I7S9D7	Vibrio_phage	73.7	4.3e-72
WP_001029276.1|1309791_1310226_-	DUF1320 domain-containing protein	NA	A0A2I7S9E9	Vibrio_phage	88.2	9.6e-67
WP_000004757.1|1310231_1310807_-	hypothetical protein	NA	M4M9M3	Vibrio_phage	54.5	4.0e-20
WP_001218332.1|1310873_1311773_-|head	Mu-like prophage major head subunit gpT family protein	head	M4MB71	Vibrio_phage	83.1	5.5e-149
WP_001249578.1|1313063_1313348_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000638761.1|1313347_1313983_-	hypothetical protein	NA	A0A1V0E8A2	Vibrio_phage	47.3	1.7e-40
WP_000638752.1|1313979_1314492_-	hypothetical protein	NA	A0A0F6N5P8	Escherichia_phage	45.6	4.1e-32
WP_000246045.1|1314488_1314737_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001125593.1|1314748_1315522_-	hypothetical protein	NA	M1PVV7	Vibrio_phage	75.1	2.9e-114
WP_000027036.1|1315514_1317074_-	DUF935 domain-containing protein	NA	M4M9P3	Vibrio_phage	75.9	4.2e-229
WP_001105346.1|1317070_1318636_-	hypothetical protein	NA	M4MHG0	Vibrio_phage	77.6	1.9e-229
WP_001195536.1|1318636_1319218_-	DUF3486 family protein	NA	M4MCR3	Vibrio_phage	69.5	4.6e-64
WP_000008606.1|1319229_1319520_-	hypothetical protein	NA	A0A2I7S9D8	Vibrio_phage	82.3	3.9e-40
WP_000362982.1|1319528_1319828_-	DUF2730 family protein	NA	M1Q558	Vibrio_phage	71.0	2.9e-30
WP_001281318.1|1319827_1320058_-	TraR/DksA C4-type zinc finger protein	NA	M4MHG5	Vibrio_phage	63.2	1.1e-18
WP_001121000.1|1320054_1320651_-	hypothetical protein	NA	M4MB79	Vibrio_phage	58.6	7.3e-49
WP_000828643.1|1320626_1320917_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000493681.1|1320916_1321465_-	N-acetylmuramidase	NA	A0A2I7S9B9	Vibrio_phage	72.7	1.9e-72
WP_001029054.1|1321549_1321966_-	positive regulator of late transcription	NA	M4MHG9	Vibrio_phage	50.0	1.8e-30
WP_000158209.1|1322044_1322293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000040558.1|1322279_1322858_-	regulatory protein GemA	NA	A0A2I7S9B8	Vibrio_phage	59.3	8.6e-55
WP_000581642.1|1322868_1323054_-	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_000466684.1|1323071_1323305_-	hypothetical protein	NA	M4M9N5	Vibrio_phage	67.5	8.3e-25
WP_000762331.1|1323384_1323915_-	hypothetical protein	NA	A0A0M3LPP6	Mannheimia_phage	42.9	2.2e-28
WP_001292533.1|1323911_1324382_-	hypothetical protein	NA	M4MHH2	Vibrio_phage	62.2	2.2e-48
WP_000414667.1|1324378_1324576_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000551394.1|1324559_1324802_-	hypothetical protein	NA	M4MCS5	Vibrio_phage	60.8	9.3e-19
WP_000512066.1|1324794_1325067_-	hypothetical protein	NA	A0A2I7S9G2	Vibrio_phage	62.4	1.7e-21
WP_001192102.1|1325076_1325691_-	DUF3164 family protein	NA	M4MHH7	Vibrio_phage	79.6	2.0e-86
WP_001096736.1|1325677_1325872_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001032751.1|1325846_1326212_-	hypothetical protein	NA	M4MB90	Vibrio_phage	60.6	6.9e-26
WP_000065387.1|1326221_1326662_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000157297.1|1326671_1326896_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000800334.1|1326903_1327848_-	AAA family ATPase	NA	M4M9P4	Vibrio_phage	73.7	1.1e-126
WP_000270200.1|1327874_1329878_-|transposase	Mu transposase C-terminal domain-containing protein	transposase	A0A2I7S9A8	Vibrio_phage	69.8	4.2e-274
WP_000373567.1|1329889_1330114_-	helix-turn-helix domain-containing protein	NA	M1PVU4	Vibrio_phage	61.9	2.3e-16
WP_001285966.1|1330266_1331004_+	transcriptional regulator	NA	A0A2I7S9A5	Vibrio_phage	60.7	4.3e-83
>prophage 4
NC_012582	Vibrio cholerae O395 chromosome I, complete sequence	3024078	1633058	1658796	3024078	coat	Vibrio_phage(58.82%)	20	NA	NA
WP_001097338.1|1633058_1635218_-	type I secretion system permease/ATPase	NA	W8CYL7	Bacillus_phage	28.6	1.6e-48
WP_001092347.1|1635220_1636582_-	HlyD family type I secretion periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_001911009.1|1637844_1645737_+	alpha/beta fold hydrolase	NA	B3Y8K3	Vibrio_virus	100.0	4.9e-07
WP_000593519.1|1646194_1646569_-	cholera enterotoxin binding subunit CtxB	NA	A0A142I6Y1	Vibrio_phage	100.0	5.9e-65
WP_001881225.1|1646565_1647342_-	cholera enterotoxin catalytic subunit CtxA	NA	A0A142I6Y0	Vibrio_phage	100.0	1.3e-151
WP_000021609.1|1647461_1648661_-	zonula occludens toxin ZOT	NA	A0A023W604	Vibrio_virus	99.2	8.4e-238
WP_011929321.1|1648657_1648951_-	accessory cholera enterotoxin	NA	A0A0F6YNQ7	Vibrio_phage	97.9	1.2e-44
WP_001268539.1|1648947_1650135_-|coat	minor coat protein pIII	coat	Q8LTP2	Vibrio_virus	92.4	1.9e-181
WP_000493023.1|1650241_1650490_-	colonization factor	NA	A0A0F6WBH0	Vibrio_phage	100.0	8.8e-33
WP_000842207.1|1650625_1650982_-	hypothetical protein	NA	A0A0N9HJ67	Vibrio_phage	100.0	9.7e-65
WP_000743997.1|1650983_1652063_-	replication initiation factor domain-containing protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
WP_000492997.1|1652194_1652530_+	helix-turn-helix transcriptional regulator	NA	A0A0N9HJE7	Vibrio_phage	100.0	4.7e-53
WP_000842207.1|1652771_1653128_-	hypothetical protein	NA	A0A0N9HJ67	Vibrio_phage	100.0	9.7e-65
WP_000743997.1|1653129_1654209_-	replication initiation factor domain-containing protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
WP_000492997.1|1654340_1654676_+	helix-turn-helix transcriptional regulator	NA	A0A0N9HJE7	Vibrio_phage	100.0	4.7e-53
WP_000170634.1|1655294_1655879_-	DNA-binding protein	NA	E3U9I9	Vibrio_phage	100.0	6.4e-114
WP_001161489.1|1655871_1656039_-	hypothetical protein	NA	E3U9J0	Vibrio_phage	100.0	2.3e-13
WP_001052672.1|1656116_1656809_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000512956.1|1656938_1657208_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001881266.1|1657227_1658796_-	replication protein	NA	A7BJY2	Enterobacteria_phage	32.3	2.7e-58
>prophage 5
NC_012582	Vibrio cholerae O395 chromosome I, complete sequence	3024078	2507540	2514157	3024078		Staphylococcus_phage(66.67%)	7	NA	NA
WP_000864130.1|2507540_2508011_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	48.7	6.8e-34
WP_001122865.1|2508275_2509385_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	39.8	6.7e-64
WP_000493874.1|2509425_2510079_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	38.2	1.2e-31
WP_001131982.1|2510083_2511187_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.1	1.3e-43
WP_000543544.1|2511212_2511662_-	transcriptional regulator NrdR	NA	NA	NA	NA	NA
WP_000366574.1|2511761_2513012_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	49.5	5.0e-100
WP_000210573.1|2513023_2514157_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.4	1.4e-64
>prophage 1
NC_012583	Vibrio cholerae O395 chromosome II, complete sequence	1111222	211084	281606	1111222	transposase,capsid,terminase,tail,plate,head,portal,protease,integrase	Vibrio_phage(81.48%)	71	205160:205175	218778:218793
205160:205175	attL	TCACTTTGTTCATCTC	NA	NA	NA	NA
WP_000779169.1|211084_211927_-	potassium channel family protein	NA	A0A1B0Y2S3	Lactobacillus_phage	44.0	7.5e-07
WP_000251270.1|211992_212541_-	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_001217709.1|213198_214242_+	GMP reductase	NA	A0A0N9Q9A5	Chrysochromulina_ericina_virus	53.6	1.8e-98
WP_000116330.1|214374_215406_-|integrase	tyrosine-type recombinase/integrase	integrase	A0A1S6L016	Salmonella_phage	52.9	1.1e-97
WP_000985033.1|215405_215819_-	hypothetical protein	NA	U3PDE6	Vibrio_phage	100.0	8.9e-70
WP_000132153.1|215818_216724_-	BRCT domain-containing protein	NA	U3PB51	Vibrio_phage	100.0	1.3e-161
WP_011929346.1|216749_217397_-	phage repressor protein CI	NA	A0A166YHA0	Vibrio_phage	77.0	8.7e-88
WP_000959026.1|217545_217758_+	hypothetical protein	NA	U3PFJ1	Vibrio_phage	100.0	6.4e-32
WP_000253094.1|217868_218408_+	phage regulatory CII family protein	NA	U3PIJ8	Vibrio_phage	98.9	1.0e-94
WP_001272765.1|218420_218855_+	hypothetical protein	NA	U3PDF0	Vibrio_phage	100.0	2.8e-74
218778:218793	attR	GAGATGAACAAAGTGA	NA	NA	NA	NA
WP_001031153.1|218936_219470_+	hypothetical protein	NA	U3PB56	Vibrio_phage	98.3	1.6e-84
WP_000997543.1|219466_219877_+	hypothetical protein	NA	U3PCE8	Vibrio_phage	93.4	1.0e-70
WP_001198814.1|220126_220354_+	hypothetical protein	NA	U3PIK2	Vibrio_phage	100.0	3.2e-37
WP_000099608.1|220350_220968_+	DNA methyltransferase	NA	U3PDF3	Vibrio_phage	100.0	1.2e-118
WP_000629095.1|220964_221075_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000613059.1|221071_221656_+	hypothetical protein	NA	U3PB60	Vibrio_phage	97.4	1.1e-102
WP_001094898.1|221652_224214_+	replication endonuclease	NA	A0A166YHE2	Vibrio_phage	95.5	0.0e+00
WP_000756239.1|224223_224760_+	DUF262 domain-containing protein	NA	U3PFK3	Vibrio_phage	100.0	4.1e-99
WP_001140410.1|224833_225172_-	helix-turn-helix transcriptional regulator	NA	Q8HA49	Vibrio_phage	100.0	2.1e-53
WP_001292394.1|225409_225655_+	hypothetical protein	NA	U3PDF9	Vibrio_phage	98.8	4.5e-37
WP_001263191.1|225655_225907_-	ogr/Delta-like zinc finger family protein	NA	U3PB63	Vibrio_phage	100.0	1.9e-43
WP_000448633.1|225977_226463_-	type II toxin-antitoxin system YhaV family toxin	NA	Q8HA46	Vibrio_phage	99.4	6.9e-90
WP_000521064.1|226466_226661_-	hypothetical protein	NA	Q8HA45	Vibrio_phage	100.0	5.1e-28
WP_000204987.1|227116_227794_+	Bro-N domain-containing protein	NA	Q8HA44	Vibrio_phage	100.0	1.8e-128
WP_002034218.1|227790_228813_-|portal	phage portal protein	portal	U3PFK6	Vibrio_phage	91.7	3.2e-185
WP_000331804.1|228809_230627_-|terminase	terminase ATPase subunit family protein	terminase	U3PIL1	Vibrio_phage	99.2	0.0e+00
WP_001127096.1|230800_231700_+|capsid	GPO family capsid scaffolding protein	capsid	A0A160DHM4	Vibrio_phage	99.7	1.2e-122
WP_000078357.1|231736_232759_+|capsid	phage major capsid protein, P2 family	capsid	A0A160DHH1	Vibrio_phage	96.4	1.7e-186
WP_000059162.1|232762_233479_+|terminase	terminase endonuclease subunit	terminase	U3PCG2	Vibrio_phage	93.3	1.3e-124
WP_000494022.1|233585_234047_+|head	head completion/stabilization protein	head	U3PFL1	Vibrio_phage	99.3	5.8e-78
WP_000107425.1|234043_234526_+|tail	phage tail protein	tail	U3PIL4	Vibrio_phage	63.2	4.4e-52
WP_000628619.1|234522_235179_+	hypothetical protein	NA	R9TPZ7	Vibrio_phage	33.3	9.6e-18
WP_000312536.1|235180_236290_+	DUF2586 family protein	NA	U3PB71	Vibrio_phage	98.4	1.0e-205
WP_000063627.1|236289_236748_+	DUF2597 family protein	NA	U3PCG7	Vibrio_phage	100.0	1.3e-82
WP_000382491.1|236762_236972_+	TraR/DksA family transcriptional regulator	NA	U3PFL5	Vibrio_phage	100.0	2.0e-33
WP_001077689.1|236968_237196_+	hypothetical protein	NA	U3PIL8	Vibrio_phage	100.0	2.1e-36
WP_000705018.1|237182_237770_+	lysozyme	NA	U3PDH1	Vibrio_phage	67.7	8.2e-77
WP_001113534.1|237744_238086_+	hypothetical protein	NA	U3PB75	Vibrio_phage	95.6	3.2e-49
WP_002034229.1|238135_238297_+	hypothetical protein	NA	A0A166YHN7	Vibrio_phage	96.2	1.4e-23
WP_000165783.1|238293_238575_+	hypothetical protein	NA	A0A160DHS7	Vibrio_phage	76.3	5.3e-34
WP_000343646.1|238771_240589_+|tail	phage tail tape measure protein	tail	U3PFL8	Vibrio_phage	75.9	1.5e-249
WP_001113003.1|240578_240911_+	DUF2590 family protein	NA	U3PIM1	Vibrio_phage	100.0	1.7e-55
WP_000044511.1|240907_242107_+|plate	baseplate J/gp47 family protein	plate	U3PDH5	Vibrio_phage	99.2	1.9e-221
WP_000005872.1|242103_242763_+	hypothetical protein	NA	U3PB79	Vibrio_phage	99.5	3.1e-125
WP_000083762.1|242759_244598_+|tail	phage tail protein	tail	Q8HA52	Vibrio_phage	100.0	0.0e+00
WP_000369862.1|244597_245122_+	hypothetical protein	NA	Q8HA51	Vibrio_phage	100.0	9.1e-96
WP_000267790.1|245124_246018_+	hypothetical protein	NA	U3PIM3	Vibrio_phage	97.0	6.0e-156
WP_000457680.1|246005_246479_+	hypothetical protein	NA	U3PDI0	Vibrio_phage	99.4	1.1e-76
WP_000779004.1|246475_248107_+	hypothetical protein	NA	A0A160DHT6	Vibrio_phage	97.4	4.3e-309
WP_001883155.1|249448_250600_+	DNA cytosine methyltransferase	NA	A0A1P8CX13	Bacillus_phage	26.3	2.9e-25
WP_000762954.1|250723_252640_+	DUF262 domain-containing protein	NA	NA	NA	NA	NA
WP_000606740.1|252632_253757_+	DUF3696 domain-containing protein	NA	NA	NA	NA	NA
WP_000849738.1|253753_254632_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000503164.1|254699_255137_-|transposase	IS200/IS605-like element IS1004 family transposase	transposase	Q331U4	Clostridium_botulinum_C_phage	40.8	1.9e-22
WP_079993097.1|255268_255493_-	HNH endonuclease	NA	NA	NA	NA	NA
WP_000507087.1|255641_256997_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.4	1.7e-48
WP_000967516.1|257186_258515_-	anaerobic C4-dicarboxylate transporter	NA	NA	NA	NA	NA
WP_000400328.1|258765_259596_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	47.4	2.4e-58
WP_000717524.1|259698_260226_+	nicotinate-nicotinamide nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_000362857.1|260492_262034_+	DUF3369 domain-containing protein	NA	NA	NA	NA	NA
WP_000796029.1|262091_264038_-	hypothetical protein	NA	W8CYF6	Bacillus_phage	23.3	7.3e-05
WP_001267880.1|264287_265262_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001046719.1|265339_266920_-	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
WP_001276502.1|267323_268529_-	multidrug efflux MFS transporter EmrD	NA	NA	NA	NA	NA
WP_000949610.1|268781_269048_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000178906.1|269038_270118_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	32.8	3.8e-19
WP_000746867.1|270238_271495_-	thermolabile hemolysin	NA	NA	NA	NA	NA
WP_000586206.1|274977_276624_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	29.4	3.3e-22
WP_001033424.1|276971_277910_+	triacylglycerol lipase	NA	NA	NA	NA	NA
WP_000717572.1|277919_278774_+	lipase secretion chaperone	NA	NA	NA	NA	NA
WP_000848953.1|278849_281606_-|protease	M6 family metalloprotease PrtV	protease	NA	NA	NA	NA
>prophage 2
NC_012583	Vibrio cholerae O395 chromosome II, complete sequence	1111222	696422	702758	1111222	coat	Vibrio_phage(66.67%)	9	NA	NA
WP_000593519.1|696422_696797_-	cholera enterotoxin binding subunit CtxB	NA	A0A142I6Y1	Vibrio_phage	100.0	5.9e-65
WP_001881225.1|696793_697570_-	cholera enterotoxin catalytic subunit CtxA	NA	A0A142I6Y0	Vibrio_phage	100.0	1.3e-151
WP_000021609.1|697689_698889_-	zonula occludens toxin ZOT	NA	A0A023W604	Vibrio_virus	99.2	8.4e-238
WP_011929321.1|698885_699179_-	accessory cholera enterotoxin	NA	A0A0F6YNQ7	Vibrio_phage	97.9	1.2e-44
WP_001268539.1|699175_700363_-|coat	minor coat protein pIII	coat	Q8LTP2	Vibrio_virus	92.4	1.9e-181
WP_000493023.1|700469_700718_-	colonization factor	NA	A0A0F6WBH0	Vibrio_phage	100.0	8.8e-33
WP_000842207.1|700853_701210_-	hypothetical protein	NA	A0A0N9HJ67	Vibrio_phage	100.0	9.7e-65
WP_000743997.1|701211_702291_-	replication initiation factor domain-containing protein	NA	U5TQR3	Satellite_phage	100.0	2.2e-213
WP_000492997.1|702422_702758_+	helix-turn-helix transcriptional regulator	NA	A0A0N9HJE7	Vibrio_phage	100.0	4.7e-53
