assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000021345.1_ASM2134v1	NC_011369	Rhizobium leguminosarum bv. trifolii WSM2304, complete sequence	1	562025-562107	1	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh	Orphan	GTAGCGGTTCCGGGATAACGACAT	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh	NA|154aa|up_6|NC_011369.1_550999_551461_+,NA|189aa|down_1|NC_011369.1_563206_563773_-,NA|203aa|down_5|NC_011369.1_570122_570731_-	NA|421aa|up_9|NC_011369.1_546323_547586_+	cd01556, EPSP_synthase, EPSP synthase domain	NA|645aa|up_8|NC_011369.1_547622_549557_+	pfam09972, DUF2207, Predicted membrane protein (DUF2207)	NA|428aa|up_7|NC_011369.1_549622_550906_+	PRK00885, PRK00885, phosphoribosylamine--glycine ligase; Provisional	NA|154aa|up_6|NC_011369.1_550999_551461_+	NA	NA|606aa|up_5|NC_011369.1_551893_553711_+	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|728aa|up_4|NC_011369.1_554082_556266_-	PRK01233, glyS, glycyl-tRNA synthetase subunit beta; Validated	NA|770aa|up_3|NC_011369.1_556694_559004_+	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|420aa|up_2|NC_011369.1_559137_560397_+	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]	NA|194aa|up_1|NC_011369.1_560432_561014_+	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|271aa|up_0|NC_011369.1_561186_561999_+	COG3713, OmpV, Outer membrane protein V [Cell envelope biogenesis, outer membrane]	NA|320aa|down_0|NC_011369.1_562165_563125_+	PRK12878, ubiA, 4-hydroxybenzoate octaprenyltransferase	NA|189aa|down_1|NC_011369.1_563206_563773_-	NA	NA|1112aa|down_2|NC_011369.1_564070_567406_+	pfam06748, DUF1217, Protein of unknown function (DUF1217)	NA|479aa|down_3|NC_011369.1_567586_569023_-	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion]	NA|325aa|down_4|NC_011369.1_569059_570034_-	COG0009, SUA5, Putative translation factor (SUA5) [Translation, ribosomal structure and biogenesis]	NA|203aa|down_5|NC_011369.1_570122_570731_-	NA	NA|415aa|down_6|NC_011369.1_571134_572379_+	COG4638, HcaE, Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit [Inorganic ion transport and metabolism / General function prediction only]	NA|157aa|down_7|NC_011369.1_572516_572987_+	pfam07886, BA14K, BA14K-like protein	NA|88aa|down_8|NC_011369.1_573051_573315_-	pfam06169, DUF982, Protein of unknown function (DUF982)	NA|382aa|down_9|NC_011369.1_573693_574839_-	pfam14294, DUF4372, Domain of unknown function (DUF4372)
GCF_000021345.1_ASM2134v1	NC_011369	Rhizobium leguminosarum bv. trifolii WSM2304, complete sequence	2	1525879-1525984	2	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh	Orphan	AAAGCATGTCGCGCAAAAGTGTGC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh	NA,NA|156aa|down_5|NC_011369.1_1531354_1531822_+	NA|338aa|up_9|NC_011369.1_1516801_1517815_+	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]	NA|286aa|up_8|NC_011369.1_1517833_1518691_+	COG1354, scpA, Rec8/ScpA/Scc1-like protein (kleisin family) [Replication,    recombination, and repair]	NA|239aa|up_7|NC_011369.1_1518687_1519404_+	COG1386, scpB, Chromosome segregation and condensation protein B [DNA replication, recombination and repair]	NA|64aa|up_6|NC_011369.1_1519585_1519777_+	PRK00720, tatA, twin-arginine translocase TatA/TatE family subunit	NA|209aa|up_5|NC_011369.1_1519828_1520455_+	PRK00708, PRK00708, twin-arginine translocase subunit TatB	NA|276aa|up_4|NC_011369.1_1520451_1521279_+	COG0805, TatC, Sec-independent protein secretion pathway component TatC [Intracellular trafficking and secretion]	NA|428aa|up_3|NC_011369.1_1521378_1522662_+	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional	NA|258aa|up_2|NC_011369.1_1522666_1523440_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional	NA|218aa|up_1|NC_011369.1_1523436_1524090_+	PRK00312, pcm, protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA|531aa|up_0|NC_011369.1_1524229_1525822_+	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane]	NA|291aa|down_0|NC_011369.1_1526022_1526895_-	COG2607, COG2607, Predicted ATPase (AAA+ superfamily) [General function prediction only]	NA|116aa|down_1|NC_011369.1_1527098_1527446_+	COG1862, YajC, Preprotein translocase subunit YajC [Intracellular trafficking and secretion]	NA|847aa|down_2|NC_011369.1_1527491_1530032_+	PRK14726, PRK14726, protein translocase subunit SecDF	NA|129aa|down_3|NC_011369.1_1530036_1530423_+	COG3737, COG3737, Uncharacterized conserved protein [Function unknown]	NA|286aa|down_4|NC_011369.1_1530425_1531283_+	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|156aa|down_5|NC_011369.1_1531354_1531822_+	NA	NA|478aa|down_6|NC_011369.1_1531943_1533377_-	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed	NA|48aa|down_7|NC_011369.1_1533484_1533628_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|49aa|down_8|NC_011369.1_1533928_1534075_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|368aa|down_9|NC_011369.1_1534946_1536050_+	COG4872, COG4872, Predicted membrane protein [Function unknown]
GCF_000021345.1_ASM2134v1	NC_011369	Rhizobium leguminosarum bv. trifolii WSM2304, complete sequence	3	1538408-1538493	3	CRISPRCasFinder	no		csa3,cas3,WYL,DEDDh	Orphan	GCCGCCCCGAAGAAGAAGGCCGC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,cas3,WYL,DEDDh	NA|156aa|up_5|NC_011369.1_1531354_1531822_+,NA|59aa|down_8|NC_011369.1_1546092_1546269_-	NA|116aa|up_9|NC_011369.1_1527098_1527446_+	COG1862, YajC, Preprotein translocase subunit YajC [Intracellular trafficking and secretion]	NA|847aa|up_8|NC_011369.1_1527491_1530032_+	PRK14726, PRK14726, protein translocase subunit SecDF	NA|129aa|up_7|NC_011369.1_1530036_1530423_+	COG3737, COG3737, Uncharacterized conserved protein [Function unknown]	NA|286aa|up_6|NC_011369.1_1530425_1531283_+	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism]	NA|156aa|up_5|NC_011369.1_1531354_1531822_+	NA	NA|478aa|up_4|NC_011369.1_1531943_1533377_-	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed	NA|48aa|up_3|NC_011369.1_1533484_1533628_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|49aa|up_2|NC_011369.1_1533928_1534075_-	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown]	NA|368aa|up_1|NC_011369.1_1534946_1536050_+	COG4872, COG4872, Predicted membrane protein [Function unknown]	NA|197aa|up_0|NC_011369.1_1536046_1536637_+	pfam14345, GDYXXLXY, GDYXXLXY protein	NA|146aa|down_0|NC_011369.1_1538688_1539126_+	COG3631, COG3631, Ketosteroid isomerase-related protein [General function prediction only]	NA|592aa|down_1|NC_011369.1_1539178_1540954_-	smart00729, Elp3, Elongator protein 3, MiaB family, Radical SAM	NA|268aa|down_2|NC_011369.1_1541110_1541914_-	cd09083, EEP-1, Exonuclease-Endonuclease-Phosphatase domain; uncharacterized family 1	NA|469aa|down_3|NC_011369.1_1541978_1543385_-	PRK05249, PRK05249, Si-specific NAD(P)(+) transhydrogenase	NA|39aa|down_4|NC_011369.1_1543485_1543602_-	PRK00024, PRK00024, DNA repair protein RadC	NA|276aa|down_5|NC_011369.1_1543625_1544453_-	PRK00024, PRK00024, DNA repair protein RadC	NA|279aa|down_6|NC_011369.1_1544460_1545297_-	PRK05716, PRK05716, methionine aminopeptidase; Validated	NA|213aa|down_7|NC_011369.1_1545443_1546082_-	COG4185, COG4185, Uncharacterized protein conserved in bacteria [Function unknown]	NA|59aa|down_8|NC_011369.1_1546092_1546269_-	NA	NA|220aa|down_9|NC_011369.1_1546485_1547145_+	COG1309, AcrR, Transcriptional regulator [Transcription]
