assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000020825.1_ASM2082v1	NC_011206	Acidithiobacillus ferrooxidans ATCC 53993, complete genome	1	141692-141780	1	CRISPRCasFinder	no		csa3,WYL,RT,Cas9_archaeal,DEDDh,cas3,PrimPol,DinG	Orphan	TGTTAGCCCACACCCACGCGGGGGCAAG	28	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,Cas9_archaeal,DEDDh,cas3,PrimPol,DinG	NA|306aa|up_7|NC_011206.1_130606_131524_-,NA|546aa|up_6|NC_011206.1_131808_133446_-,NA|67aa|down_5|NC_011206.1_146834_147035_-	NA|297aa|up_9|NC_011206.1_128216_129107_+	COG0338, Dam, Site-specific DNA methylase [DNA replication, recombination, and repair]	NA|165aa|up_8|NC_011206.1_129169_129664_+	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional	NA|306aa|up_7|NC_011206.1_130606_131524_-	NA	NA|546aa|up_6|NC_011206.1_131808_133446_-	NA	NA|534aa|up_5|NC_011206.1_133472_135074_-	pfam15978, TnsD, Tn7-like transposition protein D	NA|560aa|up_4|NC_011206.1_135070_136750_-	pfam13401, AAA_22, AAA domain	NA|158aa|up_3|NC_011206.1_137516_137990_-	pfam13592, HTH_33, Winged helix-turn helix	NA|218aa|up_2|NC_011206.1_138281_138935_+	pfam17929, TetR_C_34, Tetracyclin repressor-like, C-terminal domain	NA|440aa|up_1|NC_011206.1_139269_140589_+	pfam14236, DUF4338, Domain of unknown function (DUF4338)	NA|105aa|up_0|NC_011206.1_140710_141025_+	COG5433, COG5433, Transposase [DNA replication, recombination, and repair]	NA|440aa|down_0|NC_011206.1_141846_143166_+	pfam01593, Amino_oxidase, Flavin containing amine oxidoreductase	NA|339aa|down_1|NC_011206.1_143185_144202_+	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs	NA|44aa|down_2|NC_011206.1_144498_144630_+	smart00671, SEL1, Sel1-like repeats	NA|396aa|down_3|NC_011206.1_144896_146084_-	pfam04966, OprB, Carbohydrate-selective porin, OprB family	NA|235aa|down_4|NC_011206.1_146113_146818_-	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|67aa|down_5|NC_011206.1_146834_147035_-	NA	NA|457aa|down_6|NC_011206.1_147045_148416_-	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]	NA|136aa|down_7|NC_011206.1_148973_149381_-	TIGR02051, Mercuric_resistance_operon_regulatory_protein, Hg(II)-responsive transcriptional regulator	NA|163aa|down_8|NC_011206.1_149430_149919_+	PRK13755, PRK13755, organomercurial transporter MerC	NA|474aa|down_9|NC_011206.1_149932_151354_+	PRK13748, PRK13748, putative mercuric reductase; Provisional
GCF_000020825.1_ASM2082v1	NC_011206	Acidithiobacillus ferrooxidans ATCC 53993, complete genome	2	1120281-1120359	2	CRISPRCasFinder	no		csa3,WYL,RT,Cas9_archaeal,DEDDh,cas3,PrimPol,DinG	Orphan	GGGCGATTCGTTTCACCTCCTCCGC	25	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,Cas9_archaeal,DEDDh,cas3,PrimPol,DinG	NA|483aa|up_3|NC_011206.1_1116455_1117904_+,NA	NA|91aa|up_9|NC_011206.1_1110491_1110764_-	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|71aa|up_8|NC_011206.1_1110844_1111057_-	pfam12728, HTH_17, Helix-turn-helix domain	NA|274aa|up_7|NC_011206.1_1111840_1112662_-	cd07398, MPP_YbbF-LpxH, Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain	NA|97aa|up_6|NC_011206.1_1112857_1113148_+	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|379aa|up_5|NC_011206.1_1113342_1114479_+	cd03814, GT4-like, glycosyltransferase family 4 proteins	NA|405aa|up_4|NC_011206.1_1114512_1115727_+	cd03817, GT4_UGDG-like, UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins	NA|483aa|up_3|NC_011206.1_1116455_1117904_+	NA	NA|214aa|up_2|NC_011206.1_1117918_1118560_+	COG2863, COG2863, Cytochrome c553 [Energy production and conversion]	NA|323aa|up_1|NC_011206.1_1118633_1119602_-	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]	NA|79aa|up_0|NC_011206.1_1119705_1119942_+	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators	NA|419aa|down_0|NC_011206.1_1120694_1121951_+	PRK10590, PRK10590, ATP-dependent RNA helicase RhlE; Provisional	NA|244aa|down_1|NC_011206.1_1122070_1122802_+	TIGR02154, PhoB, phosphate regulon transcriptional regulatory protein PhoB	NA|443aa|down_2|NC_011206.1_1122863_1124192_+	TIGR02966, Phosphate_regulon_sensor_protein_PhoR, phosphate regulon sensor kinase PhoR	NA|340aa|down_3|NC_011206.1_1124261_1125281_+	PRK10918, PRK10918, phosphate ABC transporter substrate-binding protein PstS	NA|330aa|down_4|NC_011206.1_1125325_1126315_+	PRK11275, pstC, phosphate ABC transporter permease PstC	NA|285aa|down_5|NC_011206.1_1126311_1127166_+	PRK11268, pstA, phosphate ABC transporter permease PstA	NA|256aa|down_6|NC_011206.1_1127165_1127933_+	PRK10744, pstB, phosphate ABC transporter ATP-binding protein PstB	NA|238aa|down_7|NC_011206.1_1127944_1128658_+	PRK11115, PRK11115, phosphate signaling complex protein PhoU	NA|504aa|down_8|NC_011206.1_1128660_1130172_+	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism]	NA|197aa|down_9|NC_011206.1_1130425_1131016_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]
GCF_000020825.1_ASM2082v1	NC_011206	Acidithiobacillus ferrooxidans ATCC 53993, complete genome	3	1357260-1357351	3	CRISPRCasFinder	no		csa3,WYL,RT,Cas9_archaeal,DEDDh,cas3,PrimPol,DinG	Orphan	CCTGGTCAGTACAACAACGGCTACGG	26	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,RT,Cas9_archaeal,DEDDh,cas3,PrimPol,DinG	NA|101aa|up_4|NC_011206.1_1352867_1353170_+,NA|65aa|up_1|NC_011206.1_1356429_1356624_+,NA|53aa|up_0|NC_011206.1_1356949_1357108_-,NA|63aa|down_4|NC_011206.1_1366003_1366192_-,NA|105aa|down_6|NC_011206.1_1367340_1367655_-,NA|86aa|down_7|NC_011206.1_1367656_1367914_-	NA|286aa|up_9|NC_011206.1_1347412_1348270_+	pfam09995, DUF2236, Uncharacterized protein conserved in bacteria (DUF2236)	NA|223aa|up_8|NC_011206.1_1348579_1349248_+	pfam04335, VirB8, VirB8 protein	NA|372aa|up_7|NC_011206.1_1349260_1350376_+	pfam03524, CagX, Conjugal transfer protein	NA|339aa|up_6|NC_011206.1_1350377_1351394_+	TIGR02775, probable_conjugal_transfer_protein_TrbG, P-type conjugative transfer protein TrbG	NA|487aa|up_5|NC_011206.1_1351396_1352857_+	cd16429, VirB10, VirB10 forms part of core complex in Type IV secretion system (T4SS)	NA|101aa|up_4|NC_011206.1_1352867_1353170_+	NA	NA|219aa|up_3|NC_011206.1_1353166_1353823_+	cd16892, LT_VirB1-like, VirB1-like subfamily	NA|829aa|up_2|NC_011206.1_1353833_1356320_+	PRK13880, PRK13880, conjugal transfer coupling protein TraG; Provisional	NA|65aa|up_1|NC_011206.1_1356429_1356624_+	NA	NA|53aa|up_0|NC_011206.1_1356949_1357108_-	NA	NA|832aa|down_0|NC_011206.1_1358482_1360978_+	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|335aa|down_1|NC_011206.1_1360916_1361921_+	cd01948, EAL, EAL domain	NA|237aa|down_2|NC_011206.1_1362058_1362769_-	pfam07238, PilZ, PilZ domain	NA|880aa|down_3|NC_011206.1_1362939_1365579_-	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase	NA|63aa|down_4|NC_011206.1_1366003_1366192_-	NA	NA|300aa|down_5|NC_011206.1_1366429_1367329_-	cd09128, PLDc_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized phospholipase D-like proteins	NA|105aa|down_6|NC_011206.1_1367340_1367655_-	NA	NA|86aa|down_7|NC_011206.1_1367656_1367914_-	NA	NA|413aa|down_8|NC_011206.1_1367997_1369236_-	cd16393, SPO0J_N, Thermus thermophilus stage 0 sporulation protein J-like N-terminal domain, ParB family member	NA|257aa|down_9|NC_011206.1_1369237_1370008_-	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
