assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	1	277477-277615	1	CRISPRCasFinder	no		csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Orphan	GAAGAGTGTGGGCGGTTGGCGGTG	24	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA|142aa|up_9|NC_010803.1_262394_262820_+,NA|241aa|down_2|NC_010803.1_279788_280511_+,NA|157aa|down_8|NC_010803.1_285184_285655_-	NA|142aa|up_9|NC_010803.1_262394_262820_+	NA	NA|112aa|up_8|NC_010803.1_262988_263324_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|416aa|up_7|NC_010803.1_263316_264564_+	pfam07804, HipA_C, HipA-like C-terminal domain	NA|923aa|up_6|NC_010803.1_264811_267580_+	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair]	NA|523aa|up_5|NC_010803.1_267974_269543_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|514aa|up_4|NC_010803.1_269706_271248_-	PRK00074, guaA, GMP synthase; Reviewed	NA|755aa|up_3|NC_010803.1_271282_273547_-	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|308aa|up_2|NC_010803.1_273602_274526_-	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]	NA|223aa|up_1|NC_010803.1_274688_275357_+	PRK10847, PRK10847, DedA family protein	NA|492aa|up_0|NC_010803.1_276000_277476_+	TIGR02733, similar_to_to_phytoene_dehydrogenase, C-3',4' desaturase CrtD	NA|421aa|down_0|NC_010803.1_277729_278992_+	TIGR03916, hypothetical_protein, putative DNA modification/repair radical SAM protein	NA|246aa|down_1|NC_010803.1_278996_279734_+	TIGR03915, putative_DNA_metabolism_protein, probable DNA metabolism protein	NA|241aa|down_2|NC_010803.1_279788_280511_+	NA	NA|281aa|down_3|NC_010803.1_280604_281447_-	cd07713, DHPS-like_MBL-fold, Methanocaldococcus jannaschii dihydropteroate synthase, Thermoanaerobacter tengcongensis Tflp, and related proteins; MBL-fold metallo hydrolase domain	NA|194aa|down_4|NC_010803.1_281525_282107_-	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|270aa|down_5|NC_010803.1_282462_283272_+	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	NA|447aa|down_6|NC_010803.1_283314_284655_+	PRK01077, PRK01077, cobyrinate a,c-diamide synthase	NA|178aa|down_7|NC_010803.1_284661_285195_+	COG3911, COG3911, Predicted ATPase [General function prediction only]	NA|157aa|down_8|NC_010803.1_285184_285655_-	NA	NA|850aa|down_9|NC_010803.1_285832_288382_+	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	2	499776-508012	1,2,1	PILER-CR,CRISPRCasFinder,CRT	no	WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Unclear	CTTATAATTGCACCAATATGGAATTGAAAC,CTTATAATTGCACCAATATGGAATTGAAAC,CTTATAATTGCACCAATATGGAATTGAAAC	30,30,30	0	0	NA	NA	I-A,II-B,III-A:I-A,II-B,III-A:I-A,II-B,III-A	123,123,123	123	Unclear	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA,NA|82aa|down_1|NC_010803.1_510630_510876_+,NA|192aa|down_4|NC_010803.1_513898_514474_+,NA|55aa|down_7|NC_010803.1_518289_518454_+	cas6|241aa|up_9|NC_010803.1_489490_490213_+	cd09759, Cas6_I-A, CRISPR/Cas system-associated RAMP superfamily protein Cas6	NA|361aa|up_8|NC_010803.1_490314_491397_+	pfam09952, AbiEi_2, Transcriptional regulator, AbiEi antitoxin, Type IV TA system	NA|264aa|up_7|NC_010803.1_491386_492178_+	COG4849, COG4849, Predicted nucleotidyltransferase [General function prediction    only]	cas8b2|463aa|up_6|NC_010803.1_492170_493559_+	cd09665, Cas8a1_I-A, CRISPR/Cas system-associated protein Cas8a1	cas7|342aa|up_5|NC_010803.1_493581_494607_+	cd09687, Cas7_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas7	cas5|207aa|up_4|NC_010803.1_494609_495230_+	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP	cas3|751aa|up_3|NC_010803.1_495231_497484_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas1|385aa|up_2|NC_010803.1_497488_498643_+	TIGR03641, cas1_HMARI, CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP	cas2|87aa|up_1|NC_010803.1_498774_499035_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas4|167aa|up_0|NC_010803.1_499041_499542_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	NA|664aa|down_0|NC_010803.1_508432_510424_+	cd08587, PI-PLCXDc_like, Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins	NA|82aa|down_1|NC_010803.1_510630_510876_+	NA	NA|558aa|down_2|NC_010803.1_510982_512656_+	pfam02353, CMAS, Mycolic acid cyclopropane synthetase	NA|340aa|down_3|NC_010803.1_512844_513864_+	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|192aa|down_4|NC_010803.1_513898_514474_+	NA	NA|240aa|down_5|NC_010803.1_514487_515207_-	pfam06210, DUF1003, Protein of unknown function (DUF1003)	NA|952aa|down_6|NC_010803.1_515187_518043_-	PRK00349, uvrA, excinuclease ABC subunit UvrA	NA|55aa|down_7|NC_010803.1_518289_518454_+	NA	NA|917aa|down_8|NC_010803.1_518554_521305_-	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional	NA|294aa|down_9|NC_010803.1_521461_522343_+	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only]
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	3	583684-583772	3	CRISPRCasFinder	no		csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Orphan	GAAGCAGCACCTGCAACAGAAGCAGCACCTGC	32	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA|153aa|up_8|NC_010803.1_571983_572442_+,NA|185aa|down_6|NC_010803.1_591265_591820_+	NA|137aa|up_9|NC_010803.1_571353_571764_-	COG0824, FcbC, Predicted thioesterase [General function prediction only]	NA|153aa|up_8|NC_010803.1_571983_572442_+	NA	NA|271aa|up_7|NC_010803.1_572549_573362_+	pfam04170, NlpE, NlpE N-terminal domain	NA|325aa|up_6|NC_010803.1_573450_574425_+	PRK10734, PRK10734, putative calcium/sodium:proton antiporter; Provisional	NA|402aa|up_5|NC_010803.1_574438_575644_-	PRK04439, PRK04439, methionine adenosyltransferase	NA|380aa|up_4|NC_010803.1_575818_576958_+	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA	NA|343aa|up_3|NC_010803.1_576980_578009_-	PRK13930, PRK13930, rod shape-determining protein MreB; Provisional	NA|429aa|up_2|NC_010803.1_578272_579559_+	PRK00877, hisD, bifunctional histidinal dehydrogenase/ histidinol dehydrogenase; Reviewed	NA|344aa|up_1|NC_010803.1_579555_580587_+	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional	NA|857aa|up_0|NC_010803.1_580888_583459_+	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated	NA|68aa|down_0|NC_010803.1_584597_584801_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|76aa|down_1|NC_010803.1_585463_585691_-	pfam04002, RadC, RadC-like JAB domain	NA|98aa|down_2|NC_010803.1_586065_586359_+	pfam00816, Histone_HNS, H-NS histone family	NA|300aa|down_3|NC_010803.1_586946_587846_-	COG0679, COG0679, Predicted permeases [General function prediction only]	NA|425aa|down_4|NC_010803.1_588242_589517_-	PRK09369, PRK09369, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Validated	NA|517aa|down_5|NC_010803.1_589709_591260_+	pfam01551, Peptidase_M23, Peptidase family M23	NA|185aa|down_6|NC_010803.1_591265_591820_+	NA	NA|283aa|down_7|NC_010803.1_591819_592668_+	PRK13980, PRK13980, NAD synthetase; Provisional	NA|532aa|down_8|NC_010803.1_592788_594384_-	PRK09077, PRK09077, L-aspartate oxidase; Provisional	NA|205aa|down_9|NC_010803.1_594405_595020_-	PRK10847, PRK10847, DedA family protein
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	4	1009935-1011874	2,4,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,cas6	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Type III-C,Type III-B,Type III-A,Type III-D	CTTTATATCTAATTGCACTCATTGAGGATTGAAAC,CTTTATATCTAATTGCACTCATTGAGGATTGAAAC,CTTTATATCTAATTGCACTCATTGAGGATTGAAAC,CTTTATATCTAATTGCACTCATTGAGGATTGAAAC	35,35,35,35	1	1	1009970-1010004	NC_010803.1_2154907-2154873	NA:NA:NA:NA	24,26,26,24	26	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA,cmr5gr11|125aa|down_6|NC_010803.1_1023749_1024124_+,cmr3gr5|268aa|down_7|NC_010803.1_1024123_1024927_+,NA|474aa|down_8|NC_010803.1_1024985_1026407_+	NA|230aa|up_9|NC_010803.1_996660_997350_-	TIGR04283, glycosyl_transferase_family_2, transferase 2, rSAM/selenodomain-associated	NA|352aa|up_8|NC_010803.1_997964_999020_-	TIGR04167, radical_SAM_domain_protein, radical SAM/Cys-rich domain protein	NA|454aa|up_7|NC_010803.1_999391_1000753_-	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase	NA|176aa|up_6|NC_010803.1_1001335_1001863_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|715aa|up_5|NC_010803.1_1001924_1004069_+	COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only]	NA|140aa|up_4|NC_010803.1_1004134_1004554_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|92aa|up_3|NC_010803.1_1005837_1006113_-	pfam10387, DUF2442, Protein of unknown function (DUF2442)	NA|87aa|up_2|NC_010803.1_1006123_1006384_-	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|327aa|up_1|NC_010803.1_1006596_1007577_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|391aa|up_0|NC_010803.1_1007634_1008807_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	cas2|95aa|down_0|NC_010803.1_1012341_1012626_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|732aa|down_1|NC_010803.1_1012745_1014941_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cmr1gr7|332aa|down_2|NC_010803.1_1017691_1018687_+	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	cmr6gr7|424aa|down_3|NC_010803.1_1018683_1019955_+	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	cas10|939aa|down_4|NC_010803.1_1019951_1022768_+	cd09701, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr4gr7|331aa|down_5|NC_010803.1_1022760_1023753_+	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cmr5gr11|125aa|down_6|NC_010803.1_1023749_1024124_+	NA	cmr3gr5|268aa|down_7|NC_010803.1_1024123_1024927_+	NA	NA|474aa|down_8|NC_010803.1_1024985_1026407_+	NA	NA|404aa|down_9|NC_010803.1_1027956_1029167_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	5	1015192-1016258	4,5,3	PILER-CR,CRISPRCasFinder,CRT	no	cas2,cas1,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,cas6	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Type III-C,Type III-B,Type III-A,Type III-D	CTTTATATCTAATTGCACTCA,CTTTATATCTAATTGCACTCATTGAGGATTGAAAC,CTTTATATCTAATTGCACTCANTGAGGATTGAAAC	21,35,35	0	0	NA	NA	NA:NA:NA	13,14,14	14	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA,cmr5gr11|125aa|down_4|NC_010803.1_1023749_1024124_+,cmr3gr5|268aa|down_5|NC_010803.1_1024123_1024927_+,NA|474aa|down_6|NC_010803.1_1024985_1026407_+,NA|169aa|down_9|NC_010803.1_1032704_1033211_+	NA|454aa|up_9|NC_010803.1_999391_1000753_-	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase	NA|176aa|up_8|NC_010803.1_1001335_1001863_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|715aa|up_7|NC_010803.1_1001924_1004069_+	COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only]	NA|140aa|up_6|NC_010803.1_1004134_1004554_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|92aa|up_5|NC_010803.1_1005837_1006113_-	pfam10387, DUF2442, Protein of unknown function (DUF2442)	NA|87aa|up_4|NC_010803.1_1006123_1006384_-	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|327aa|up_3|NC_010803.1_1006596_1007577_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|391aa|up_2|NC_010803.1_1007634_1008807_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	cas2|95aa|up_1|NC_010803.1_1012341_1012626_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|732aa|up_0|NC_010803.1_1012745_1014941_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cmr1gr7|332aa|down_0|NC_010803.1_1017691_1018687_+	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	cmr6gr7|424aa|down_1|NC_010803.1_1018683_1019955_+	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	cas10|939aa|down_2|NC_010803.1_1019951_1022768_+	cd09701, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr4gr7|331aa|down_3|NC_010803.1_1022760_1023753_+	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cmr5gr11|125aa|down_4|NC_010803.1_1023749_1024124_+	NA	cmr3gr5|268aa|down_5|NC_010803.1_1024123_1024927_+	NA	NA|474aa|down_6|NC_010803.1_1024985_1026407_+	NA	NA|404aa|down_7|NC_010803.1_1027956_1029167_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas6|124aa|down_8|NC_010803.1_1030822_1031194_+	pfam01881, Cas_Cas6, CRISPR associated protein Cas6	NA|169aa|down_9|NC_010803.1_1032704_1033211_+	NA
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	6	1016657-1016762	6	CRISPRCasFinder	no	cas2,cas1,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,cas6	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Type III-C,Type III-B,Type III-A,Type III-D	CTTTATATCTAATTGCACTCATTGAGGATTGAAAC	35	0	0	NA	NA	NA	1	1	TypeIII-C,TypeIII-B,TypeIII-A,TypeIII-D	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA,cmr5gr11|125aa|down_4|NC_010803.1_1023749_1024124_+,cmr3gr5|268aa|down_5|NC_010803.1_1024123_1024927_+,NA|474aa|down_6|NC_010803.1_1024985_1026407_+,NA|169aa|down_9|NC_010803.1_1032704_1033211_+	NA|454aa|up_9|NC_010803.1_999391_1000753_-	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase	NA|176aa|up_8|NC_010803.1_1001335_1001863_+	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|715aa|up_7|NC_010803.1_1001924_1004069_+	COG3968, COG3968, Uncharacterized protein related to glutamine synthetase [General function prediction only]	NA|140aa|up_6|NC_010803.1_1004134_1004554_-	COG0432, COG0432, Uncharacterized conserved protein [Function unknown]	NA|92aa|up_5|NC_010803.1_1005837_1006113_-	pfam10387, DUF2442, Protein of unknown function (DUF2442)	NA|87aa|up_4|NC_010803.1_1006123_1006384_-	pfam13711, DUF4160, Domain of unknown function (DUF4160)	NA|327aa|up_3|NC_010803.1_1006596_1007577_+	pfam01797, Y1_Tnp, Transposase IS200 like	NA|391aa|up_2|NC_010803.1_1007634_1008807_-	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only]	cas2|95aa|up_1|NC_010803.1_1012341_1012626_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cas1|732aa|up_0|NC_010803.1_1012745_1014941_+	pfam01867, Cas_Cas1, CRISPR associated protein Cas1	cmr1gr7|332aa|down_0|NC_010803.1_1017691_1018687_+	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	cmr6gr7|424aa|down_1|NC_010803.1_1018683_1019955_+	cd09726, RAMP_I_III, CRISPR/Cas system-associated RAMP superfamily protein	cas10|939aa|down_2|NC_010803.1_1019951_1022768_+	cd09701, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr4gr7|331aa|down_3|NC_010803.1_1022760_1023753_+	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cmr5gr11|125aa|down_4|NC_010803.1_1023749_1024124_+	NA	cmr3gr5|268aa|down_5|NC_010803.1_1024123_1024927_+	NA	NA|474aa|down_6|NC_010803.1_1024985_1026407_+	NA	NA|404aa|down_7|NC_010803.1_1027956_1029167_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	cas6|124aa|down_8|NC_010803.1_1030822_1031194_+	pfam01881, Cas_Cas6, CRISPR associated protein Cas6	NA|169aa|down_9|NC_010803.1_1032704_1033211_+	NA
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	7	1402679-1402760	7	CRISPRCasFinder	no		csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Orphan	AACAATGCAGGCACGGTGATCAATAATT	28	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA|185aa|up_9|NC_010803.1_1396688_1397243_+,NA|149aa|up_7|NC_010803.1_1398082_1398529_-,NA|115aa|up_4|NC_010803.1_1399752_1400097_-,NA|134aa|down_2|NC_010803.1_1409916_1410318_+	NA|185aa|up_9|NC_010803.1_1396688_1397243_+	NA	NA|280aa|up_8|NC_010803.1_1397246_1398086_+	pfam02085, Cytochrom_CIII, Class III cytochrome C family	NA|149aa|up_7|NC_010803.1_1398082_1398529_-	NA	NA|100aa|up_6|NC_010803.1_1398994_1399294_-	COG3668, ParE, Plasmid stabilization system protein [General function prediction only]	NA|84aa|up_5|NC_010803.1_1399307_1399559_-	TIGR02606, Antitoxin_ParD, putative addiction module antidote protein, CC2985 family	NA|115aa|up_4|NC_010803.1_1399752_1400097_-	NA	NA|113aa|up_3|NC_010803.1_1400182_1400521_+	TIGR02683, Uncharacterized_protein_HI_1419, putative addiction module killer protein	NA|97aa|up_2|NC_010803.1_1400492_1400783_+	TIGR02684, conserved_hypothetical_protein, probable addiction module antidote protein	NA|259aa|up_1|NC_010803.1_1400924_1401701_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|98aa|up_0|NC_010803.1_1401697_1401991_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|349aa|down_0|NC_010803.1_1407083_1408130_+	pfam13358, DDE_3, DDE superfamily endonuclease	NA|309aa|down_1|NC_010803.1_1408799_1409726_+	pfam03895, YadA_anchor, YadA-like membrane anchor domain	NA|134aa|down_2|NC_010803.1_1409916_1410318_+	NA	NA|342aa|down_3|NC_010803.1_1410413_1411439_+	COG0790, COG0790, FOG: TPR repeat, SEL1 subfamily [General function prediction only]	NA|330aa|down_4|NC_010803.1_1411570_1412560_-	COG2267, PldB, Lysophospholipase [Lipid metabolism]	NA|619aa|down_5|NC_010803.1_1412881_1414738_-	PRK00293, dipZ, thiol:disulfide interchange protein precursor; Provisional	NA|183aa|down_6|NC_010803.1_1414766_1415315_-	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|167aa|down_7|NC_010803.1_1415410_1415911_-	cd02236, cupin_CV2614-like, Chromobacterium violaceum CV2614 and related proteins, cupin domain	NA|1224aa|down_8|NC_010803.1_1416027_1419699_-	TIGR00618, Nuclease_SbcCD_subunit_C, exonuclease SbcC	NA|382aa|down_9|NC_010803.1_1419862_1421008_-	COG0281, SfcA, Malic enzyme [Energy production and conversion]
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	8	1554065-1554195	8	CRISPRCasFinder	no	DEDDh	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Unclear	CCGACTACCGGATACTGATTCTGCCTACCGCTCACCGCTCACTGCCCACA	50	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA|137aa|up_5|NC_010803.1_1549497_1549908_+,NA|288aa|up_1|NC_010803.1_1551960_1552824_-,NA|97aa|down_2|NC_010803.1_1556197_1556488_-,NA|79aa|down_4|NC_010803.1_1558368_1558605_+	NA|247aa|up_9|NC_010803.1_1545392_1546133_+	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|362aa|up_8|NC_010803.1_1546324_1547410_-	cd02933, OYE_like_FMN, Old yellow enzyme (OYE)-like FMN binding domain	NA|139aa|up_7|NC_010803.1_1547731_1548148_+	COG4315, COG4315, Uncharacterized protein conserved in bacteria [Function unknown]	NA|290aa|up_6|NC_010803.1_1548386_1549256_+	cd13967, PT_UbiA_5, UbiA family of prenyltransferases (PTases), Unknown subgroup	NA|137aa|up_5|NC_010803.1_1549497_1549908_+	NA	NA|265aa|up_4|NC_010803.1_1549956_1550751_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|155aa|up_3|NC_010803.1_1550757_1551222_-	pfam00581, Rhodanese, Rhodanese-like domain	DEDDh|215aa|up_2|NC_010803.1_1551223_1551868_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|288aa|up_1|NC_010803.1_1551960_1552824_-	NA	NA|292aa|up_0|NC_010803.1_1552979_1553855_-	PRK05457, PRK05457, protease HtpX	NA|331aa|down_0|NC_010803.1_1554223_1555216_-	pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18	NA|58aa|down_1|NC_010803.1_1555519_1555693_-	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|97aa|down_2|NC_010803.1_1556197_1556488_-	NA	NA|336aa|down_3|NC_010803.1_1556774_1557782_-	COG0502, BioB, Biotin synthase and related enzymes [Coenzyme metabolism]	NA|79aa|down_4|NC_010803.1_1558368_1558605_+	NA	NA|210aa|down_5|NC_010803.1_1558632_1559262_+	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|136aa|down_6|NC_010803.1_1559310_1559718_+	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|324aa|down_7|NC_010803.1_1559985_1560957_+	COG1509, KamA, Lysine 2,3-aminomutase [Amino acid transport and metabolism]	NA|523aa|down_8|NC_010803.1_1561915_1563484_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|136aa|down_9|NC_010803.1_1563524_1563932_-	COG1487, VapC, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	9	1558099-1558221	9	CRISPRCasFinder	no	DEDDh	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Unclear	ACTGATTCTGCCCACCACCCACGGCTAACCGCTCACAATCTTC	43	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA|137aa|up_9|NC_010803.1_1549497_1549908_+,NA|288aa|up_5|NC_010803.1_1551960_1552824_-,NA|97aa|up_1|NC_010803.1_1556197_1556488_-,NA|79aa|down_0|NC_010803.1_1558368_1558605_+,NA|64aa|down_7|NC_010803.1_1564167_1564359_-	NA|137aa|up_9|NC_010803.1_1549497_1549908_+	NA	NA|265aa|up_8|NC_010803.1_1549956_1550751_+	COG3000, ERG3, Sterol desaturase [Lipid metabolism]	NA|155aa|up_7|NC_010803.1_1550757_1551222_-	pfam00581, Rhodanese, Rhodanese-like domain	DEDDh|215aa|up_6|NC_010803.1_1551223_1551868_-	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family	NA|288aa|up_5|NC_010803.1_1551960_1552824_-	NA	NA|292aa|up_4|NC_010803.1_1552979_1553855_-	PRK05457, PRK05457, protease HtpX	NA|331aa|up_3|NC_010803.1_1554223_1555216_-	pfam00704, Glyco_hydro_18, Glycosyl hydrolases family 18	NA|58aa|up_2|NC_010803.1_1555519_1555693_-	pfam11154, DUF2934, Protein of unknown function (DUF2934)	NA|97aa|up_1|NC_010803.1_1556197_1556488_-	NA	NA|336aa|up_0|NC_010803.1_1556774_1557782_-	COG0502, BioB, Biotin synthase and related enzymes [Coenzyme metabolism]	NA|79aa|down_0|NC_010803.1_1558368_1558605_+	NA	NA|210aa|down_1|NC_010803.1_1558632_1559262_+	PRK00121, trmB, tRNA (guanine-N(7)-)-methyltransferase; Reviewed	NA|136aa|down_2|NC_010803.1_1559310_1559718_+	pfam13635, DUF4143, Domain of unknown function (DUF4143)	NA|324aa|down_3|NC_010803.1_1559985_1560957_+	COG1509, KamA, Lysine 2,3-aminomutase [Amino acid transport and metabolism]	NA|523aa|down_4|NC_010803.1_1561915_1563484_+	COG5421, COG5421, Transposase [DNA replication, recombination, and repair]	NA|136aa|down_5|NC_010803.1_1563524_1563932_-	COG1487, VapC, Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]	NA|75aa|down_6|NC_010803.1_1563928_1564153_-	smart00966, SpoVT_AbrB, SpoVT / AbrB like domain	NA|64aa|down_7|NC_010803.1_1564167_1564359_-	NA	NA|217aa|down_8|NC_010803.1_1564993_1565644_-	TIGR02646, Hypothetical_protein_SMc04429, TIGR02646 family protein	NA|423aa|down_9|NC_010803.1_1565640_1566909_-	COG3950, COG3950, Predicted ATP-binding protein involved in virulence [General function prediction only]
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	10	2065870-2066093	5	PILER-CR	no		csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Orphan	CTTCATACCCACTCATCCCTCATCGCTCATCGCTCATCGCCACACTCCCCAATCTTCC	58	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA,NA|342aa|down_2|NC_010803.1_2081918_2082944_-,NA|385aa|down_5|NC_010803.1_2085858_2087013_-	NA|165aa|up_9|NC_010803.1_2043354_2043849_+	cd01055, Nonheme_Ferritin, nonheme-containing ferritins	NA|288aa|up_8|NC_010803.1_2043960_2044824_-	cd07400, MPP_1, Uncharacterized subfamily, metallophosphatase domain	NA|124aa|up_7|NC_010803.1_2048140_2048512_-	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|365aa|up_6|NC_010803.1_2051887_2052982_-	pfam14362, DUF4407, Domain of unknown function (DUF4407)	NA|432aa|up_5|NC_010803.1_2053635_2054931_-	pfam03415, Peptidase_C11, Clostripain family	NA|304aa|up_4|NC_010803.1_2055813_2056725_+	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|391aa|up_3|NC_010803.1_2056742_2057915_+	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit	NA|62aa|up_2|NC_010803.1_2057906_2058092_-	pfam08564, CDC37_C, Cdc37 C terminal domain	NA|1856aa|up_1|NC_010803.1_2058202_2063770_-	pfam14252, DUF4347, Domain of unknown function (DUF4347)	NA|548aa|up_0|NC_010803.1_2064179_2065823_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|418aa|down_0|NC_010803.1_2066203_2067457_-	cd03818, GT4_ExpC-like, Rhizobium meliloti ExpC and similar proteins	NA|186aa|down_1|NC_010803.1_2067538_2068096_-	NF033203, entero_EhxA, enterohemolysin EhxA	NA|342aa|down_2|NC_010803.1_2081918_2082944_-	NA	NA|116aa|down_3|NC_010803.1_2083432_2083780_+	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|331aa|down_4|NC_010803.1_2084610_2085603_-	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs	NA|385aa|down_5|NC_010803.1_2085858_2087013_-	NA	NA|255aa|down_6|NC_010803.1_2087014_2087779_-	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|224aa|down_7|NC_010803.1_2087775_2088447_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|215aa|down_8|NC_010803.1_2088451_2089096_-	cd02513, CMP-NeuAc_Synthase, CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety	NA|428aa|down_9|NC_010803.1_2089141_2090425_-	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	11	2070863-2071108	10	CRISPRCasFinder	no		csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Orphan	CATATCCCCGGACAGGGTATCGTTCCCGGCTCCGCCATCCAT	42	0	0	NA	NA	NA	2	2	Orphan	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA,NA|342aa|down_0|NC_010803.1_2081918_2082944_-,NA|385aa|down_3|NC_010803.1_2085858_2087013_-	NA|124aa|up_9|NC_010803.1_2048140_2048512_-	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|365aa|up_8|NC_010803.1_2051887_2052982_-	pfam14362, DUF4407, Domain of unknown function (DUF4407)	NA|432aa|up_7|NC_010803.1_2053635_2054931_-	pfam03415, Peptidase_C11, Clostripain family	NA|304aa|up_6|NC_010803.1_2055813_2056725_+	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|391aa|up_5|NC_010803.1_2056742_2057915_+	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit	NA|62aa|up_4|NC_010803.1_2057906_2058092_-	pfam08564, CDC37_C, Cdc37 C terminal domain	NA|1856aa|up_3|NC_010803.1_2058202_2063770_-	pfam14252, DUF4347, Domain of unknown function (DUF4347)	NA|548aa|up_2|NC_010803.1_2064179_2065823_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|418aa|up_1|NC_010803.1_2066203_2067457_-	cd03818, GT4_ExpC-like, Rhizobium meliloti ExpC and similar proteins	NA|186aa|up_0|NC_010803.1_2067538_2068096_-	NF033203, entero_EhxA, enterohemolysin EhxA	NA|342aa|down_0|NC_010803.1_2081918_2082944_-	NA	NA|116aa|down_1|NC_010803.1_2083432_2083780_+	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|331aa|down_2|NC_010803.1_2084610_2085603_-	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs	NA|385aa|down_3|NC_010803.1_2085858_2087013_-	NA	NA|255aa|down_4|NC_010803.1_2087014_2087779_-	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|224aa|down_5|NC_010803.1_2087775_2088447_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|215aa|down_6|NC_010803.1_2088451_2089096_-	cd02513, CMP-NeuAc_Synthase, CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety	NA|428aa|down_7|NC_010803.1_2089141_2090425_-	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein	NA|151aa|down_8|NC_010803.1_2090428_2090881_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|360aa|down_9|NC_010803.1_2090887_2091967_-	TIGR04425, 3-dehydroquinate_synthase, putative sugar phosphate phospholyase (cyclizing)
GCF_000020465.1_ASM2046v1	NC_010803	Chlorobium limicola DSM 245, complete sequence	12	2075726-2075830	11	CRISPRCasFinder	no		csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	Orphan	GCCTGCACCGCCGTCAAGCAGATC	24	0	0	NA	NA	NA	1	1	Orphan	csa3,WYL,cas6,cas8b2,cas7,cas5,cas3,cas1,cas2,cas4,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,csa5gr11	NA,NA|342aa|down_0|NC_010803.1_2081918_2082944_-,NA|385aa|down_3|NC_010803.1_2085858_2087013_-	NA|124aa|up_9|NC_010803.1_2048140_2048512_-	PRK12275, PRK12275, hypothetical protein; Reviewed	NA|365aa|up_8|NC_010803.1_2051887_2052982_-	pfam14362, DUF4407, Domain of unknown function (DUF4407)	NA|432aa|up_7|NC_010803.1_2053635_2054931_-	pfam03415, Peptidase_C11, Clostripain family	NA|304aa|up_6|NC_010803.1_2055813_2056725_+	PRK06606, PRK06606, branched-chain amino acid transaminase	NA|391aa|up_5|NC_010803.1_2056742_2057915_+	pfam13177, DNA_pol3_delta2, DNA polymerase III, delta subunit	NA|62aa|up_4|NC_010803.1_2057906_2058092_-	pfam08564, CDC37_C, Cdc37 C terminal domain	NA|1856aa|up_3|NC_010803.1_2058202_2063770_-	pfam14252, DUF4347, Domain of unknown function (DUF4347)	NA|548aa|up_2|NC_010803.1_2064179_2065823_-	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|418aa|up_1|NC_010803.1_2066203_2067457_-	cd03818, GT4_ExpC-like, Rhizobium meliloti ExpC and similar proteins	NA|186aa|up_0|NC_010803.1_2067538_2068096_-	NF033203, entero_EhxA, enterohemolysin EhxA	NA|342aa|down_0|NC_010803.1_2081918_2082944_-	NA	NA|116aa|down_1|NC_010803.1_2083432_2083780_+	PTZ00146, PTZ00146, fibrillarin; Provisional	NA|331aa|down_2|NC_010803.1_2084610_2085603_-	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs	NA|385aa|down_3|NC_010803.1_2085858_2087013_-	NA	NA|255aa|down_4|NC_010803.1_2087014_2087779_-	COG3836, HpcH, 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase [Carbohydrate transport and metabolism]	NA|224aa|down_5|NC_010803.1_2087775_2088447_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|215aa|down_6|NC_010803.1_2088451_2089096_-	cd02513, CMP-NeuAc_Synthase, CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety	NA|428aa|down_7|NC_010803.1_2089141_2090425_-	pfam12708, Pectate_lyase_3, Pectate lyase superfamily protein	NA|151aa|down_8|NC_010803.1_2090428_2090881_-	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism]	NA|360aa|down_9|NC_010803.1_2090887_2091967_-	TIGR04425, 3-dehydroquinate_synthase, putative sugar phosphate phospholyase (cyclizing)
