assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000020345.1_ASM2034v1	NC_012658	Clostridium botulinum Ba4 str. 657, complete sequence	1	2367157-2367253	1	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT	Type III-A,Type III-D,Type III-B,Type III-C	ATTTAAATACATCTTATGTTAATGTTCAA	29	0	0	NA	NA	III-B	1	1	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT,cas14k,cas14j,c2c10_CAS-V-U3	NA|163aa|up_8|NC_012658.1_2360257_2360746_+,NA|141aa|up_7|NC_012658.1_2360783_2361206_-,NA|98aa|down_2|NC_012658.1_2371222_2371516_-,csx1|485aa|down_6|NC_012658.1_2374621_2376076_-	NA|198aa|up_9|NC_012658.1_2359007_2359601_-	PRK14413, PRK14413, glycerol-3-phosphate acyltransferase	NA|163aa|up_8|NC_012658.1_2360257_2360746_+	NA	NA|141aa|up_7|NC_012658.1_2360783_2361206_-	NA	NA|205aa|up_6|NC_012658.1_2361338_2361953_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|118aa|up_5|NC_012658.1_2362276_2362630_+	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain	NA|58aa|up_4|NC_012658.1_2362713_2362887_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|469aa|up_3|NC_012658.1_2362960_2364367_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_2|NC_012658.1_2364470_2365211_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|up_1|NC_012658.1_2365217_2366108_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|174aa|up_0|NC_012658.1_2366415_2366937_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_0|NC_012658.1_2368283_2370281_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_1|NC_012658.1_2370377_2371175_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_2|NC_012658.1_2371222_2371516_-	NA	cmr6gr7|345aa|down_3|NC_012658.1_2372090_2373125_-	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cmr5gr11|150aa|down_4|NC_012658.1_2373261_2373711_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr4gr7|293aa|down_5|NC_012658.1_2373727_2374606_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|485aa|down_6|NC_012658.1_2374621_2376076_-	NA	cmr3gr5|378aa|down_7|NC_012658.1_2376068_2377202_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|635aa|down_8|NC_012658.1_2377203_2379108_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|302aa|down_9|NC_012658.1_2379092_2379998_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1
GCF_000020345.1_ASM2034v1	NC_012658	Clostridium botulinum Ba4 str. 657, complete sequence	2	2367505-2367990	2	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT	Type III-A,Type III-D,Type III-B,Type III-C	ATTTAAATACATCTTATGTTAATGTTCAA	29	0	0	NA	NA	III-B	7	7	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT,cas14k,cas14j,c2c10_CAS-V-U3	NA|163aa|up_8|NC_012658.1_2360257_2360746_+,NA|141aa|up_7|NC_012658.1_2360783_2361206_-,NA|98aa|down_2|NC_012658.1_2371222_2371516_-,csx1|485aa|down_6|NC_012658.1_2374621_2376076_-	NA|198aa|up_9|NC_012658.1_2359007_2359601_-	PRK14413, PRK14413, glycerol-3-phosphate acyltransferase	NA|163aa|up_8|NC_012658.1_2360257_2360746_+	NA	NA|141aa|up_7|NC_012658.1_2360783_2361206_-	NA	NA|205aa|up_6|NC_012658.1_2361338_2361953_-	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates	NA|118aa|up_5|NC_012658.1_2362276_2362630_+	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain	NA|58aa|up_4|NC_012658.1_2362713_2362887_+	cd01085, APP, X-Prolyl Aminopeptidase 2	NA|469aa|up_3|NC_012658.1_2362960_2364367_+	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters	NA|247aa|up_2|NC_012658.1_2364470_2365211_-	pfam13649, Methyltransf_25, Methyltransferase domain	NA|297aa|up_1|NC_012658.1_2365217_2366108_-	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription]	NA|174aa|up_0|NC_012658.1_2366415_2366937_+	pfam16107, DUF4825, Domain of unknown function (DUF4825)	NA|666aa|down_0|NC_012658.1_2368283_2370281_-	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain	NA|266aa|down_1|NC_012658.1_2370377_2371175_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|down_2|NC_012658.1_2371222_2371516_-	NA	cmr6gr7|345aa|down_3|NC_012658.1_2372090_2373125_-	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cmr5gr11|150aa|down_4|NC_012658.1_2373261_2373711_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr4gr7|293aa|down_5|NC_012658.1_2373727_2374606_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|485aa|down_6|NC_012658.1_2374621_2376076_-	NA	cmr3gr5|378aa|down_7|NC_012658.1_2376068_2377202_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|635aa|down_8|NC_012658.1_2377203_2379108_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|302aa|down_9|NC_012658.1_2379092_2379998_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1
GCF_000020345.1_ASM2034v1	NC_012658	Clostridium botulinum Ba4 str. 657, complete sequence	3	2380986-2381080	3	CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT	Type III-A,Type III-D,Type III-B,Type III-C	ATTTAAATACATCTTATGTTAATGTTCAAC	30	0	0	NA	NA	III-B	1	1	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT,cas14k,cas14j,c2c10_CAS-V-U3	NA|98aa|up_8|NC_012658.1_2371222_2371516_-,csx1|485aa|up_4|NC_012658.1_2374621_2376076_-,NA	NA|266aa|up_9|NC_012658.1_2370377_2371175_-	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators	NA|98aa|up_8|NC_012658.1_2371222_2371516_-	NA	cmr6gr7|345aa|up_7|NC_012658.1_2372090_2373125_-	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6	cmr5gr11|150aa|up_6|NC_012658.1_2373261_2373711_-	pfam09701, Cas_Cmr5, CRISPR-associated protein (Cas_Cmr5)	cmr4gr7|293aa|up_5|NC_012658.1_2373727_2374606_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|485aa|up_4|NC_012658.1_2374621_2376076_-	NA	cmr3gr5|378aa|up_3|NC_012658.1_2376068_2377202_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|635aa|up_2|NC_012658.1_2377203_2379108_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|302aa|up_1|NC_012658.1_2379092_2379998_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	cas6|230aa|up_0|NC_012658.1_2380059_2380749_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|150aa|down_0|NC_012658.1_2381451_2381901_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|139aa|down_1|NC_012658.1_2382039_2382456_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|307aa|down_2|NC_012658.1_2382767_2383688_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|down_3|NC_012658.1_2384011_2385505_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|488aa|down_4|NC_012658.1_2387309_2388773_+	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|128aa|down_5|NC_012658.1_2388806_2389190_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|151aa|down_6|NC_012658.1_2389423_2389876_+	pfam12638, Staygreen, Staygreen protein	NA|149aa|down_7|NC_012658.1_2389957_2390404_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|344aa|down_8|NC_012658.1_2390571_2391603_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|464aa|down_9|NC_012658.1_2391828_2393220_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases
GCF_000020345.1_ASM2034v1	NC_012658	Clostridium botulinum Ba4 str. 657, complete sequence	4	2385935-2386423	1,1,4	CRT,PILER-CR,CRISPRCasFinder	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT	Type III-A,Type III-D,Type III-B,Type III-C	ATTTAAATACATCTCATGTTAATGTTCAAC,ATTTAAATACATCTCATGTTAATGTTCAAC,ATTTAAATACATCTCATGTTAATGTTCAAC	30,30,30	0	0	NA	NA	III-B:III-B:III-B	7,6,6	7	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT,cas14k,cas14j,c2c10_CAS-V-U3	csx1|485aa|up_8|NC_012658.1_2374621_2376076_-,NA|300aa|down_7|NC_012658.1_2395207_2396107_+	cmr4gr7|293aa|up_9|NC_012658.1_2373727_2374606_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|485aa|up_8|NC_012658.1_2374621_2376076_-	NA	cmr3gr5|378aa|up_7|NC_012658.1_2376068_2377202_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|635aa|up_6|NC_012658.1_2377203_2379108_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|302aa|up_5|NC_012658.1_2379092_2379998_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	cas6|230aa|up_4|NC_012658.1_2380059_2380749_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|150aa|up_3|NC_012658.1_2381451_2381901_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|139aa|up_2|NC_012658.1_2382039_2382456_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|307aa|up_1|NC_012658.1_2382767_2383688_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|up_0|NC_012658.1_2384011_2385505_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|488aa|down_0|NC_012658.1_2387309_2388773_+	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|128aa|down_1|NC_012658.1_2388806_2389190_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|151aa|down_2|NC_012658.1_2389423_2389876_+	pfam12638, Staygreen, Staygreen protein	NA|149aa|down_3|NC_012658.1_2389957_2390404_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|344aa|down_4|NC_012658.1_2390571_2391603_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|464aa|down_5|NC_012658.1_2391828_2393220_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|448aa|down_6|NC_012658.1_2393426_2394770_-	TIGR03173, pbuX, xanthine permease	NA|300aa|down_7|NC_012658.1_2395207_2396107_+	NA	NA|440aa|down_8|NC_012658.1_2396446_2397766_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|258aa|down_9|NC_012658.1_2398046_2398820_-	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
GCF_000020345.1_ASM2034v1	NC_012658	Clostridium botulinum Ba4 str. 657, complete sequence	5	2386675-2386836	5,2	CRISPRCasFinder,PILER-CR	no	cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT	Type III-A,Type III-D,Type III-B,Type III-C	ATTTAAATACATCTCATGTTAATGTTCAAC,TCTTAAATACATCCTATGTTAAGGTTCAAC	30,30	0	0	NA	NA	III-B:III-B	2,2	2	TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT,cas14k,cas14j,c2c10_CAS-V-U3	csx1|485aa|up_8|NC_012658.1_2374621_2376076_-,NA|300aa|down_7|NC_012658.1_2395207_2396107_+	cmr4gr7|293aa|up_9|NC_012658.1_2373727_2374606_-	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx1|485aa|up_8|NC_012658.1_2374621_2376076_-	NA	cmr3gr5|378aa|up_7|NC_012658.1_2376068_2377202_-	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3	cas10|635aa|up_6|NC_012658.1_2377203_2379108_-	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10	cmr1gr7|302aa|up_5|NC_012658.1_2379092_2379998_-	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1	cas6|230aa|up_4|NC_012658.1_2380059_2380749_-	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6	NA|150aa|up_3|NC_012658.1_2381451_2381901_-	COG1522, Lrp, Transcriptional regulators [Transcription]	NA|139aa|up_2|NC_012658.1_2382039_2382456_+	COG2128, COG2128, Uncharacterized conserved protein [Function unknown]	NA|307aa|up_1|NC_012658.1_2382767_2383688_-	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only]	NA|498aa|up_0|NC_012658.1_2384011_2385505_+	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|488aa|down_0|NC_012658.1_2387309_2388773_+	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II	NA|128aa|down_1|NC_012658.1_2388806_2389190_+	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators	NA|151aa|down_2|NC_012658.1_2389423_2389876_+	pfam12638, Staygreen, Staygreen protein	NA|149aa|down_3|NC_012658.1_2389957_2390404_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|344aa|down_4|NC_012658.1_2390571_2391603_-	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold	NA|464aa|down_5|NC_012658.1_2391828_2393220_-	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases	NA|448aa|down_6|NC_012658.1_2393426_2394770_-	TIGR03173, pbuX, xanthine permease	NA|300aa|down_7|NC_012658.1_2395207_2396107_+	NA	NA|440aa|down_8|NC_012658.1_2396446_2397766_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|258aa|down_9|NC_012658.1_2398046_2398820_-	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism]
GCF_000020345.1_ASM2034v1	NC_012658	Clostridium botulinum Ba4 str. 657, complete sequence	6	2495738-2495967	6,3	CRISPRCasFinder,PILER-CR	no		csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT	Orphan	ATTTAAATACATCTCATGTTATTGTTCAACAA,AAAACAATTTAAATACATCTTATGTTATTGTTCAACAA	32,38	0	0	NA	NA	III-B:III-B	3,2	3	Orphan	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT,cas14k,cas14j,c2c10_CAS-V-U3	NA|77aa|up_7|NC_012658.1_2489820_2490051_-,NA|135aa|up_6|NC_012658.1_2490063_2490468_-,NA|56aa|up_5|NC_012658.1_2490834_2491002_-,NA|77aa|up_0|NC_012658.1_2495156_2495387_-,NA|225aa|down_0|NC_012658.1_2495997_2496672_-,NA|65aa|down_4|NC_012658.1_2500247_2500442_-,NA|116aa|down_6|NC_012658.1_2500760_2501108_-,NA|49aa|down_7|NC_012658.1_2501281_2501428_-,NA|112aa|down_8|NC_012658.1_2501430_2501766_-	NA|117aa|up_9|NC_012658.1_2487126_2487477_+	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|712aa|up_8|NC_012658.1_2487484_2489620_-	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily	NA|77aa|up_7|NC_012658.1_2489820_2490051_-	NA	NA|135aa|up_6|NC_012658.1_2490063_2490468_-	NA	NA|56aa|up_5|NC_012658.1_2490834_2491002_-	NA	NA|67aa|up_4|NC_012658.1_2491180_2491381_-	COG1476, COG1476, Predicted transcriptional regulators [Transcription]	NA|161aa|up_3|NC_012658.1_2491474_2491957_-	NF033218, anchor_AmaP, alkaline shock response membrane anchor protein AmaP	NA|171aa|up_2|NC_012658.1_2491959_2492472_-	COG2856, COG2856, Predicted Zn peptidase [Amino acid transport and metabolism]	NA|650aa|up_1|NC_012658.1_2492908_2494858_-	COG2333, ComEC, Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]	NA|77aa|up_0|NC_012658.1_2495156_2495387_-	NA	NA|225aa|down_0|NC_012658.1_2495997_2496672_-	NA	NA|388aa|down_1|NC_012658.1_2496930_2498094_-	cd06223, PRTases_typeI, Phosphoribosyl transferase (PRT)-type I domain	NA|386aa|down_2|NC_012658.1_2498086_2499244_-	pfam02481, DNA_processg_A, DNA recombination-mediator protein A	NA|282aa|down_3|NC_012658.1_2499362_2500208_-	cd02696, MurNAc-LAA, N-acetylmuramoyl-L-alanine amidase or MurNAc-LAA (also known as peptidoglycan aminohydrolase, NAMLA amidase, NAMLAA, Amidase 3, and peptidoglycan amidase; EC 3	NA|65aa|down_4|NC_012658.1_2500247_2500442_-	NA	NA|85aa|down_5|NC_012658.1_2500458_2500713_-	pfam10779, XhlA, Haemolysin XhlA	NA|116aa|down_6|NC_012658.1_2500760_2501108_-	NA	NA|49aa|down_7|NC_012658.1_2501281_2501428_-	NA	NA|112aa|down_8|NC_012658.1_2501430_2501766_-	NA	NA|624aa|down_9|NC_012658.1_2501770_2503642_-	cd05819, NHL, NHL repeat unit of beta-propeller proteins
GCF_000020345.1_ASM2034v1	NC_012658	Clostridium botulinum Ba4 str. 657, complete sequence	7	2694233-2694430	2	CRT	no		csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT	Orphan	TGTATCTGTTCCTGGATN	18	0	0	NA	NA	NA	4	4	Orphan	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT,cas14k,cas14j,c2c10_CAS-V-U3	NA|40aa|up_4|NC_012658.1_2691064_2691184_-,NA|52aa|up_3|NC_012658.1_2691261_2691417_-,NA	NA|186aa|up_9|NC_012658.1_2685609_2686167_-	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95	NA|680aa|up_8|NC_012658.1_2686427_2688467_-	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional	NA|542aa|up_7|NC_012658.1_2688634_2690260_-	TIGR03599, YloV, DAK2 domain fusion protein YloV	NA|117aa|up_6|NC_012658.1_2690274_2690625_-	pfam03780, Asp23, Asp23 family, cell envelope-related function	NA|64aa|up_5|NC_012658.1_2690824_2691016_+	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|40aa|up_4|NC_012658.1_2691064_2691184_-	NA	NA|52aa|up_3|NC_012658.1_2691261_2691417_-	NA	NA|215aa|up_2|NC_012658.1_2691848_2692493_-	cd07995, TPK, Thiamine pyrophosphokinase	NA|217aa|up_1|NC_012658.1_2692494_2693145_-	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated	NA|293aa|up_0|NC_012658.1_2693138_2694017_-	PRK00098, PRK00098, GTPase RsgA; Reviewed	NA|250aa|down_0|NC_012658.1_2696159_2696909_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|343aa|down_1|NC_012658.1_2696927_2697956_-	PRK14454, PRK14454, 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA|443aa|down_2|NC_012658.1_2697967_2699296_-	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA|228aa|down_3|NC_012658.1_2699316_2700000_-	pfam04298, Zn_peptidase_2, Putative neutral zinc metallopeptidase	NA|314aa|down_4|NC_012658.1_2700350_2701292_-	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed	NA|148aa|down_5|NC_012658.1_2701308_2701752_-	PRK00150, def, peptide deformylase; Reviewed	NA|736aa|down_6|NC_012658.1_2701779_2703987_-	PRK05580, PRK05580, primosome assembly protein PriA; Validated	NA|396aa|down_7|NC_012658.1_2704324_2705512_-	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated	NA|73aa|down_8|NC_012658.1_2705513_2705732_-	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed	NA|210aa|down_9|NC_012658.1_2705712_2706342_-	PRK00300, gmk, guanylate kinase; Provisional
GCF_000020345.1_ASM2034v1	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	1	135020-135114	1	CRISPRCasFinder	no		cas14k,cas14j,c2c10_CAS-V-U3,RT	Orphan	TGTTTCACTTTTATCGTGCACTTTT	25	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,DinG,WYL,cas3,cmr6gr7,cmr5gr11,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6,RT,cas14k,cas14j,c2c10_CAS-V-U3	NA|56aa|up_9|NC_012654.1_117684_117852_-,NA|71aa|up_8|NC_012654.1_117887_118100_-,NA|86aa|up_1|NC_012654.1_132304_132562_-,NA|496aa|up_0|NC_012654.1_133033_134521_+,NA|346aa|down_0|NC_012654.1_135192_136230_+,NA|104aa|down_1|NC_012654.1_136719_137031_-,NA|77aa|down_5|NC_012654.1_138379_138610_+,NA|106aa|down_6|NC_012654.1_138651_138969_-,NA|193aa|down_8|NC_012654.1_140513_141092_+,NA|221aa|down_9|NC_012654.1_141328_141991_-	NA|56aa|up_9|NC_012654.1_117684_117852_-	NA	NA|71aa|up_8|NC_012654.1_117887_118100_-	NA	NA|1292aa|up_7|NC_012654.1_119784_123660_-	pfam01742, Peptidase_M27, Clostridial neurotoxin zinc protease	NA|1198aa|up_6|NC_012654.1_123685_127279_-	pfam01742, Peptidase_M27, Clostridial neurotoxin zinc protease	NA|179aa|up_5|NC_012654.1_127440_127977_-	TIGR03209, P-21_partial, clostridium toxin-associated regulator BotR	NA|294aa|up_4|NC_012654.1_128202_129084_+	smart00458, RICIN, Ricin-type beta-trefoil	NA|147aa|up_3|NC_012654.1_129146_129587_+	pfam05588, Botulinum_HA-17, Clostridium botulinum HA-17 domain	NA|627aa|up_2|NC_012654.1_129600_131481_+	pfam03505, Clenterotox, Clostridium enterotoxin	NA|86aa|up_1|NC_012654.1_132304_132562_-	NA	NA|496aa|up_0|NC_012654.1_133033_134521_+	NA	NA|346aa|down_0|NC_012654.1_135192_136230_+	NA	NA|104aa|down_1|NC_012654.1_136719_137031_-	NA	NA|70aa|down_2|NC_012654.1_137033_137243_-	TIGR02027, DNA-directed_RNA_polymerase_subunit_alpha, DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type	NA|83aa|down_3|NC_012654.1_137263_137512_-	pfam12116, SpoIIID, Stage III sporulation protein D	NA|113aa|down_4|NC_012654.1_137622_137961_-	PRK09330, PRK09330, cell division protein FtsZ; Validated	NA|77aa|down_5|NC_012654.1_138379_138610_+	NA	NA|106aa|down_6|NC_012654.1_138651_138969_-	NA	NA|356aa|down_7|NC_012654.1_138946_140014_-	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|193aa|down_8|NC_012654.1_140513_141092_+	NA	NA|221aa|down_9|NC_012654.1_141328_141991_-	NA
