assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000020225.1_ASM2022v1	NC_010655	Akkermansia muciniphila ATCC BAA-835, complete sequence	1	2438206-2438965	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas9	DEDDh,csa3,DinG,cas3,cas2,cas1,cas9	 Type II-B,Type II-A,Type II-B, or Type II-C?,Type II-C	GTTTTGCCTTGAATCCAAAATAAGGCACAGTACAAC,GTTTTGCCTTGAATCCAAAATAAGGCACAGTACAAC,GTTTTGCCTTGAATCCAAAATAAGGCACAGTACAAC	36,36,36	0	0	NA	NA	NA:NA:NA	11,11,8	11	TypeII-B,TypeII-A,TypeII-B,orTypeII-C?,TypeII-C	DEDDh,csa3,DinG,cas3,cas2,cas1,cas9	NA,NA	NA|341aa|up_9|NC_010655.1_2424790_2425813_-	pfam13387, DUF4105, Domain of unknown function (DUF4105)	NA|840aa|up_8|NC_010655.1_2425873_2428393_-	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|342aa|up_7|NC_010655.1_2428413_2429439_-	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|395aa|up_6|NC_010655.1_2429605_2430790_-	COG2807, CynX, Cyanate permease [Inorganic ion transport and metabolism]	NA|624aa|up_5|NC_010655.1_2430985_2432857_-	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like	NA|614aa|up_4|NC_010655.1_2433033_2434875_+	PRK05218, PRK05218, heat shock protein 90; Provisional	NA|276aa|up_3|NC_010655.1_2434965_2435793_+	pfam07885, Ion_trans_2, Ion channel	NA|205aa|up_2|NC_010655.1_2435868_2436483_-	pfam05656, DUF805, Protein of unknown function (DUF805)	NA|81aa|up_1|NC_010655.1_2436531_2436774_-	sd00010, SLR, Sel1-like repeat	NA|357aa|up_0|NC_010655.1_2437063_2438134_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	cas2|104aa|down_0|NC_010655.1_2439025_2439337_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|312aa|down_1|NC_010655.1_2439324_2440260_-	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI	cas9|1102aa|down_2|NC_010655.1_2440270_2443576_-	pfam13395, HNH_4, HNH endonuclease	NA|369aa|down_3|NC_010655.1_2443942_2445049_+	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|147aa|down_4|NC_010655.1_2445148_2445589_+	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein	NA|429aa|down_5|NC_010655.1_2445724_2447011_+	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]	NA|310aa|down_6|NC_010655.1_2447047_2447977_+	TIGR01136, Cysteine_synthase, cysteine synthase	NA|205aa|down_7|NC_010655.1_2447995_2448610_+	PRK00043, thiE, thiamine phosphate synthase	NA|272aa|down_8|NC_010655.1_2448657_2449473_+	PRK09355, PRK09355, hydroxyethylthiazole kinase; Validated	NA|155aa|down_9|NC_010655.1_2449781_2450246_+	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]
GCF_000020225.1_ASM2022v1	NC_010655	Akkermansia muciniphila ATCC BAA-835, complete sequence	2	2507588-2507825	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no		DEDDh,csa3,DinG,cas3,cas2,cas1,cas9	Orphan	GTTTCAATCCACGCACTCCTTGCGGAGTGCGAC,GTTTCAATCCACGCACTCCTT,GTTTCAATCCACGCACTCCTTGCGGAGTGCGAC	33,21,33	0	0	NA	NA	NA:NA:NA	3,3,2	3	Orphan	DEDDh,csa3,DinG,cas3,cas2,cas1,cas9	NA|294aa|up_6|NC_010655.1_2502977_2503859_-,NA|94aa|up_5|NC_010655.1_2503851_2504133_-,NA|69aa|up_3|NC_010655.1_2505772_2505979_-,NA|86aa|up_0|NC_010655.1_2507264_2507522_+,NA|332aa|down_2|NC_010655.1_2513580_2514576_-,NA|210aa|down_8|NC_010655.1_2522602_2523232_-	NA|115aa|up_9|NC_010655.1_2500652_2500997_-	TIGR04535, conserved_hypothetical_protein, ferritin-like protein	NA|115aa|up_8|NC_010655.1_2501279_2501624_-	TIGR04535, conserved_hypothetical_protein, ferritin-like protein	NA|168aa|up_7|NC_010655.1_2501804_2502308_-	pfam13098, Thioredoxin_2, Thioredoxin-like domain	NA|294aa|up_6|NC_010655.1_2502977_2503859_-	NA	NA|94aa|up_5|NC_010655.1_2503851_2504133_-	NA	NA|545aa|up_4|NC_010655.1_2504129_2505764_-	pfam12236, Head-tail_con, Bacteriophage head to tail connecting protein	NA|69aa|up_3|NC_010655.1_2505772_2505979_-	NA	NA|207aa|up_2|NC_010655.1_2506303_2506924_+	PHA00662, PHA00662, hypothetical protein	NA|98aa|up_1|NC_010655.1_2506974_2507268_+	pfam03965, Penicillinase_R, Penicillinase repressor	NA|86aa|up_0|NC_010655.1_2507264_2507522_+	NA	NA|385aa|down_0|NC_010655.1_2508221_2509376_-	pfam01757, Acyl_transf_3, Acyltransferase family	NA|1194aa|down_1|NC_010655.1_2509840_2513422_-	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA	NA|332aa|down_2|NC_010655.1_2513580_2514576_-	NA	NA|150aa|down_3|NC_010655.1_2514575_2515025_-	COG1847, Jag, Predicted RNA-binding protein [General function prediction only]	NA|756aa|down_4|NC_010655.1_2515537_2517805_+	PRK11249, katE, hydroperoxidase II; Provisional	NA|898aa|down_5|NC_010655.1_2518312_2521006_-	TIGR03144, cytochrome_c_biogenesis_protein_chloroplast, cytochrome c-type biogenesis protein CcsB	NA|192aa|down_6|NC_010655.1_2521054_2521630_-	cd01041, Rubrerythrin, Rubrerythrin, ferritin-like diiron-binding domain	NA|199aa|down_7|NC_010655.1_2521931_2522528_+	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain	NA|210aa|down_8|NC_010655.1_2522602_2523232_-	NA	NA|819aa|down_9|NC_010655.1_2523251_2525708_-	COG1674, FtsK, DNA segregation ATPase FtsK/SpoIIIE and related proteins [Cell division and chromosome partitioning]
