assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000020125.1_ASM2012v1	NC_010681	Paraburkholderia phytofirmans PsJN chromosome 1, complete sequence	1	2161247-2161420	1	CRISPRCasFinder	no		RT,cas3,csa3,WYL,c2c9_V-U4,DinG,DEDDh	Orphan	TTCGTACCCGATCGGGTACGAAA	23	0	0	NA	NA	NA	3	3	Orphan	RT,cas3,csa3,WYL,c2c9_V-U4,DinG,DEDDh	NA|114aa|up_6|NC_010681.1_2149750_2150092_-,NA	NA|808aa|up_9|NC_010681.1_2144305_2146729_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|91aa|up_8|NC_010681.1_2147070_2147343_+	cd13831, HU, histone-like DNA-binding protein HU	NA|646aa|up_7|NC_010681.1_2147708_2149646_+	PRK10788, PRK10788, periplasmic folding chaperone; Provisional	NA|114aa|up_6|NC_010681.1_2149750_2150092_-	NA	NA|225aa|up_5|NC_010681.1_2150209_2150884_-	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases	NA|229aa|up_4|NC_010681.1_2150912_2151599_+	COG4181, COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]	NA|541aa|up_3|NC_010681.1_2151728_2153351_-	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed	NA|530aa|up_2|NC_010681.1_2153585_2155175_-	PRK10565, PRK10565, putative carbohydrate kinase; Provisional	NA|433aa|up_1|NC_010681.1_2155294_2156593_-	PRK00711, PRK00711, D-amino acid dehydrogenase	NA|1362aa|up_0|NC_010681.1_2157019_2161105_+	PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional	NA|95aa|down_0|NC_010681.1_2161436_2161721_+	TIGR03070, couple_hipB, transcriptional regulator, y4mF family	NA|431aa|down_1|NC_010681.1_2161710_2163003_+	cd17809, HipA_So_like, type II toxin-antitoxin sytem toxin HipA from Shewanella oneidensis and similar proteins	NA|260aa|down_2|NC_010681.1_2163078_2163858_-	PRK00059, prsA, peptidylprolyl isomerase; Provisional	NA|107aa|down_3|NC_010681.1_2163869_2164190_-	pfam01722, BolA, BolA-like protein	NA|177aa|down_4|NC_010681.1_2164191_2164722_-	PRK00259, PRK00259, intracellular septation protein A; Reviewed	NA|141aa|down_5|NC_010681.1_2164885_2165308_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|519aa|down_6|NC_010681.1_2165438_2166995_-	PRK00029, PRK00029, YdiU family protein	NA|562aa|down_7|NC_010681.1_2167188_2168874_+	PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated	NA|695aa|down_8|NC_010681.1_2169034_2171119_+	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB	NA|393aa|down_9|NC_010681.1_2171207_2172386_+	PRK07108, PRK07108, acetyl-CoA C-acyltransferase
GCF_000020125.1_ASM2012v1	NC_010679	Paraburkholderia phytofirmans PsJN plasmid pBPHYT01, complete sequence	1	114435-114517	1	CRISPRCasFinder	no			Orphan	CGGCGCGTCCCTTCGGGCCACCCCGCCCG	29	0	0	NA	NA	NA	1	1	Orphan	RT,cas3,csa3,WYL,c2c9_V-U4,DinG,DEDDh	NA|119aa|up_9|NC_010679.1_108976_109333_+,NA|99aa|up_8|NC_010679.1_109456_109753_+,NA|125aa|up_7|NC_010679.1_109960_110335_+,NA|117aa|up_6|NC_010679.1_110518_110869_+,NA|65aa|up_5|NC_010679.1_110954_111149_+,NA|151aa|up_4|NC_010679.1_111167_111620_+,NA|97aa|up_3|NC_010679.1_111681_111972_+,NA|64aa|up_2|NC_010679.1_112022_112214_+,NA|252aa|down_0|NC_010679.1_114898_115654_+,NA|167aa|down_2|NC_010679.1_115975_116476_+,NA|65aa|down_3|NC_010679.1_116475_116670_+,NA|150aa|down_6|NC_010679.1_117827_118277_+,NA|226aa|down_7|NC_010679.1_118411_119089_-,NA|126aa|down_8|NC_010679.1_119155_119533_-,NA|176aa|down_9|NC_010679.1_119586_120114_-	NA|119aa|up_9|NC_010679.1_108976_109333_+	NA	NA|99aa|up_8|NC_010679.1_109456_109753_+	NA	NA|125aa|up_7|NC_010679.1_109960_110335_+	NA	NA|117aa|up_6|NC_010679.1_110518_110869_+	NA	NA|65aa|up_5|NC_010679.1_110954_111149_+	NA	NA|151aa|up_4|NC_010679.1_111167_111620_+	NA	NA|97aa|up_3|NC_010679.1_111681_111972_+	NA	NA|64aa|up_2|NC_010679.1_112022_112214_+	NA	NA|129aa|up_1|NC_010679.1_112210_112597_+	pfam02796, HTH_7, Helix-turn-helix domain of resolvase	NA|291aa|up_0|NC_010679.1_112824_113697_+	pfam10134, RPA, Replication initiator protein A	NA|252aa|down_0|NC_010679.1_114898_115654_+	NA	NA|91aa|down_1|NC_010679.1_115706_115979_+	pfam09972, DUF2207, Predicted membrane protein (DUF2207)	NA|167aa|down_2|NC_010679.1_115975_116476_+	NA	NA|65aa|down_3|NC_010679.1_116475_116670_+	NA	NA|97aa|down_4|NC_010679.1_116679_116970_+	pfam00816, Histone_HNS, H-NS histone family	NA|208aa|down_5|NC_010679.1_117157_117781_+	pfam16509, KORA, TrfB plasmid transcriptional repressor	NA|150aa|down_6|NC_010679.1_117827_118277_+	NA	NA|226aa|down_7|NC_010679.1_118411_119089_-	NA	NA|126aa|down_8|NC_010679.1_119155_119533_-	NA	NA|176aa|down_9|NC_010679.1_119586_120114_-	NA
GCF_000020125.1_ASM2012v1	NC_010676	Paraburkholderia phytofirmans PsJN chromosome 2, complete sequence	1	3376477-3376705	1	CRT	no		csa3,DinG,cas3	Orphan	CTCCTGGAANNNCTCACC	18	2	2	3376593-3376612|3376669-3376687	NC_010676.1_3042085-3042104|NC_010681.1_2737867-2737885	NA	5	5	Orphan	RT,cas3,csa3,WYL,c2c9_V-U4,DinG,DEDDh	NA|136aa|up_6|NC_010676.1_3366924_3367332_-,NA|62aa|up_0|NC_010676.1_3375852_3376038_-,NA|84aa|down_0|NC_010676.1_3376723_3376975_-,NA|92aa|down_1|NC_010676.1_3377317_3377593_+,NA|173aa|down_3|NC_010676.1_3378056_3378575_-	NA|797aa|up_9|NC_010676.1_3361745_3364136_-	cd16916, HATPase_CheA-like, Histidine kinase-like ATPase domain of the chemotaxis protein histidine kinase CheA, and some hybrid sensor histidine kinases	NA|591aa|up_8|NC_010676.1_3364415_3366188_+	cd09173, PLDc_Nuc_like_unchar1_2, Putative catalytic domain, repeat 2, of uncharacterized hypothetical proteins similar to Nuc, an endonuclease from Salmonella typhimurium	NA|234aa|up_7|NC_010676.1_3366226_3366928_-	cd07064, AlkD_like_1, A new structural DNA glycosylase containing HEAT-like repeats	NA|136aa|up_6|NC_010676.1_3366924_3367332_-	NA	NA|480aa|up_5|NC_010676.1_3367556_3368996_-	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family	NA|1065aa|up_4|NC_010676.1_3368992_3372187_-	TIGR00915, Probable_aminoglycoside_efflux_pump, The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family	NA|416aa|up_3|NC_010676.1_3372199_3373447_-	PRK15030, PRK15030, multidrug efflux RND transporter periplasmic adaptor subunit AcrA	NA|247aa|up_2|NC_010676.1_3373807_3374548_+	PRK09468, ompR, osmolarity response regulator; Provisional	NA|416aa|up_1|NC_010676.1_3374531_3375779_+	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|62aa|up_0|NC_010676.1_3375852_3376038_-	NA	NA|84aa|down_0|NC_010676.1_3376723_3376975_-	NA	NA|92aa|down_1|NC_010676.1_3377317_3377593_+	NA	NA|119aa|down_2|NC_010676.1_3377636_3377993_+	pfam14373, Imm_superinfect, Superinfection immunity protein	NA|173aa|down_3|NC_010676.1_3378056_3378575_-	NA	NA|160aa|down_4|NC_010676.1_3378787_3379267_-	pfam07080, DUF1348, Protein of unknown function (DUF1348)	NA|222aa|down_5|NC_010676.1_3379280_3379946_-	COG1309, AcrR, Transcriptional regulator [Transcription]	NA|217aa|down_6|NC_010676.1_3380054_3380705_+	pfam04264, YceI, YceI-like domain	NA|344aa|down_7|NC_010676.1_3380802_3381834_-	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated	NA|400aa|down_8|NC_010676.1_3381847_3383047_-	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|213aa|down_9|NC_010676.1_3383196_3383835_+	cd02209, cupin_XRE_C, XRE (Xenobiotic Response Element) family transcriptional regulators, C-terminal cupin domain
