The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_010634	Yersinia pseudotuberculosis PB1/+, complete genome	4695619	1491159	1535506	4695619	tail,protease,plate	Pseudomonas_phage(25.0%)	37	NA	NA
WP_002210815.1|1491159_1491669_-|protease	serine protease inhibitor ecotin	protease	NA	NA	NA	NA
WP_002210816.1|1491703_1491961_-	2Fe-2S ferredoxin-like protein	NA	G9IAA2	Pseudomonas_phage	54.9	4.0e-20
WP_002210817.1|1491964_1493095_-	ribonucleotide-diphosphate reductase subunit beta	NA	G9IAA3	Pseudomonas_phage	78.6	7.6e-172
WP_002210818.1|1493256_1495545_-	ribonucleoside-diphosphate reductase subunit alpha	NA	I3UMG3	Colwellia_phage	64.9	1.1e-286
WP_002210820.1|1496038_1496767_-	bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase	NA	NA	NA	NA	NA
WP_012413581.1|1497066_1499742_+	DNA topoisomerase (ATP-hydrolyzing) subunit A	NA	G3M9Z5	Bacillus_virus	34.4	1.4e-102
WP_012413582.1|1499929_1502803_+	two-component system sensor histidine kinase RcsC	NA	A0A1V0SGX0	Hokovirus	28.3	3.8e-42
WP_002210824.1|1502870_1503524_-	transcriptional regulator RcsB	NA	NA	NA	NA	NA
WP_011191996.1|1503526_1506220_-	phosphotransferase RcsD	NA	NA	NA	NA	NA
WP_002210825.1|1506243_1507398_-	MFS transporter	NA	NA	NA	NA	NA
WP_012413583.1|1508501_1509617_+	porin OmpC	NA	Q1MVN1	Enterobacteria_phage	57.8	3.3e-111
WP_002228026.1|1510356_1511523_-	D-alanyl-D-alanine- carboxypeptidase/endopeptidase AmpH	NA	NA	NA	NA	NA
WP_012413584.1|1511797_1513324_-	MFS transporter	NA	NA	NA	NA	NA
WP_002230695.1|1513700_1514729_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_002208868.1|1514802_1516590_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.5	4.0e-10
WP_012413585.1|1517041_1517977_-	omptin family outer membrane beta-barrel protein YcoA	NA	NA	NA	NA	NA
WP_002208866.1|1518148_1518391_-	DinI family protein	NA	K7PKR6	Enterobacteria_phage	65.0	6.9e-22
WP_002208864.1|1518596_1519319_-	LexA family transcriptional regulator	NA	F1C599	Cronobacter_phage	51.9	2.2e-63
WP_002215470.1|1519592_1520072_+	antitermination protein Q	NA	S5M7R9	Escherichia_phage	61.0	2.3e-37
WP_011192000.1|1520273_1521587_+	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	46.2	2.6e-91
WP_002228023.1|1522314_1523130_+	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_002228022.1|1523147_1523900_+	hydroxypyruvate isomerase family protein	NA	NA	NA	NA	NA
WP_011192001.1|1524139_1524430_+	hypothetical protein	NA	H6WRZ3	Salmonella_phage	46.3	7.7e-12
WP_002208858.1|1524475_1525093_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_002208857.1|1525097_1525292_+	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	60.4	3.5e-08
WP_002208856.1|1525288_1526797_+|tail	tail protein	tail	B5TK67	Pseudomonas_phage	44.2	2.4e-104
WP_002208855.1|1526818_1527187_+|tail	phage tail protein	tail	NA	NA	NA	NA
WP_002208854.1|1527188_1527488_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_012413586.1|1527608_1529102_+	hypothetical protein	NA	NA	NA	NA	NA
WP_154018379.1|1529241_1529415_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002208852.1|1529368_1530775_+	hypothetical protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
WP_012413587.1|1530771_1531827_+|tail	tail protein	tail	A0A2I7S9G1	Vibrio_phage	27.2	1.8e-37
WP_002215460.1|1531842_1532439_+|plate	baseplate assembly protein	plate	NA	NA	NA	NA
WP_002208848.1|1532435_1532891_+	hypothetical protein	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
WP_012413588.1|1532894_1534031_+|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	30.3	6.5e-30
WP_011192006.1|1534027_1534630_+	YmfQ family protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	38.6	2.0e-33
WP_002208845.1|1534726_1535506_+|tail	tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	52.4	7.1e-52
>prophage 2
NC_010634	Yersinia pseudotuberculosis PB1/+, complete genome	4695619	1741432	1808087	4695619	protease,transposase,plate	uncultured_Caudovirales_phage(25.0%)	55	NA	NA
WP_012413614.1|1741432_1741891_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	30.7	2.1e-11
WP_012413615.1|1742006_1743281_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA	NA
WP_002211286.1|1743526_1743715_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002220006.1|1743980_1744499_-	bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase	NA	NA	NA	NA	NA
WP_002228003.1|1744567_1746340_-|protease	Lon protease family protein	protease	NA	NA	NA	NA
WP_002226586.1|1746529_1746985_+	macrodomain Ter protein MatP	NA	NA	NA	NA	NA
WP_002213066.1|1747090_1748152_-	porin OmpA	NA	NA	NA	NA	NA
WP_002213065.1|1748509_1749016_-	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_012413616.1|1749244_1749880_+	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_011192070.1|1749981_1752120_-	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_011192071.1|1752149_1752596_-	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_011192072.1|1752789_1754844_+	DNA helicase IV	NA	A7KV33	Bacillus_phage	25.8	5.7e-16
WP_002213060.1|1754904_1755369_-	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_002213058.1|1755547_1756228_-	DUF2057 family protein	NA	NA	NA	NA	NA
WP_002213056.1|1756543_1756960_+	CoA-binding protein	NA	NA	NA	NA	NA
WP_002213054.1|1757068_1757386_-	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_002213052.1|1757446_1758637_-	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	W6LLI2	Streptococcus_phage	28.1	2.1e-26
WP_002213049.1|1758730_1759009_+	acylphosphatase	NA	NA	NA	NA	NA
WP_002213046.1|1759060_1759390_-	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_011192073.1|1762713_1765131_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_002213038.1|1765284_1766031_-	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.4	3.3e-14
WP_002214710.1|1766659_1766980_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002228002.1|1767309_1767768_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
WP_011192074.1|1767757_1769041_+	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	NA	NA	NA	NA	NA
WP_011192075.1|1769033_1769780_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002213028.1|1769795_1771034_+	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_002213026.1|1771026_1771746_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_002228001.1|1771738_1772500_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
WP_002213024.1|1772502_1773291_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002228570.1|1773377_1773818_+	lipocalin-like domain-containing protein	NA	NA	NA	NA	NA
WP_002213017.1|1773855_1774104_+	acyl carrier protein	NA	NA	NA	NA	NA
WP_002213016.1|1774202_1775051_+	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_002211662.1|1776013_1776514_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_011192076.1|1776556_1778107_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_011192077.1|1778118_1779471_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_011192078.1|1779467_1780154_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_012413620.1|1780153_1781899_+	OmpA family protein	NA	NA	NA	NA	NA
WP_002210014.1|1781902_1782394_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_012413621.1|1782781_1785430_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.1	4.3e-93
WP_012413622.1|1785426_1787925_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.5	2.8e-17
WP_011192081.1|1788042_1789314_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032467135.1|1789317_1789713_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413624.1|1790028_1792731_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.5	5.2e-17
WP_011192084.1|1792733_1793150_+	DUF4431 domain-containing protein	NA	NA	NA	NA	NA
WP_011192085.1|1793158_1794907_+	TIGR02594 family protein	NA	A0A1U9ZAE8	Proteus_phage	29.0	9.8e-09
WP_011192086.1|1794911_1795424_+	hypothetical protein	NA	NA	NA	NA	NA
WP_072086170.1|1796314_1797436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011192088.1|1797432_1800855_+	type VI secretion system membrane subunit	NA	NA	NA	NA	NA
WP_011192089.1|1800898_1802500_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_072091337.1|1802490_1803576_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002214554.1|1803575_1804046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011192091.1|1804266_1806030_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_012413626.1|1805993_1807079_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_012105342.1|1807053_1807635_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_011192093.1|1807634_1808087_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 3
NC_010634	Yersinia pseudotuberculosis PB1/+, complete genome	4695619	2100716	2153437	4695619	head,portal,transposase,plate,lysis,holin,integrase,tail,capsid	Salmonella_phage(39.47%)	65	2114194:2114208	2140110:2140124
WP_012105206.1|2100716_2100932_-	phage transcriptional activator, Ogr/Delta	NA	S4TNZ3	Salmonella_phage	60.6	1.1e-18
WP_011192293.1|2101006_2102101_-	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	65.7	1.9e-127
WP_012413670.1|2102097_2102562_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	56.2	1.2e-43
WP_012413671.1|2102573_2105489_-|tail	phage tail tape measure protein	tail	Q9ZXK0	Pseudomonas_virus	52.8	2.6e-155
WP_071819140.1|2105481_2105601_-|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_011192297.1|2105615_2105963_-|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	51.6	8.6e-18
WP_011192298.1|2106016_2106532_-|tail	phage major tail tube protein	tail	A0A218M4J0	Erwinia_phage	66.3	2.5e-61
WP_011192299.1|2106543_2107719_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	79.8	1.3e-179
WP_011192300.1|2107852_2108332_-|tail	phage tail protein	tail	F1BUP0	Erwinia_phage	41.9	1.2e-28
WP_012413672.1|2108343_2109783_-	hypothetical protein	NA	F1BUP1	Erwinia_phage	77.8	2.2e-75
WP_011192302.1|2109779_2110388_-|tail	phage tail protein I	tail	F1BUP2	Erwinia_phage	75.0	1.7e-85
WP_011192303.1|2110380_2111289_-|plate	baseplate assembly protein	plate	F1BUP3	Erwinia_phage	73.2	1.3e-118
WP_011192304.1|2111291_2111645_-|plate	baseplate assembly protein	plate	A0A218M4K8	Erwinia_phage	59.3	2.4e-31
WP_072085124.1|2111641_2112340_-|plate	phage baseplate assembly protein V	plate	O80314	Escherichia_phage	62.0	6.5e-65
WP_012413673.1|2112505_2112985_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_012413674.1|2112995_2113661_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413676.1|2113854_2114301_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	51.4	2.2e-34
2114194:2114208	attL	TCGCCGTAGTTCTTT	NA	NA	NA	NA
WP_011192308.1|2114297_2114765_-|tail	phage tail protein	tail	F1BUP9	Erwinia_phage	57.2	1.8e-42
WP_072083431.1|2114751_2114976_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012304190.1|2114863_2115286_-|lysis	LysB family phage lysis regulatory protein	lysis	E5G6N2	Salmonella_phage	48.6	4.9e-23
WP_012304189.1|2115290_2115686_-	M15 family metallopeptidase	NA	A9DET4	Yersinia_phage	71.0	1.2e-47
WP_011192311.1|2115672_2116059_-|holin	holin	holin	NA	NA	NA	NA
WP_011192312.1|2116088_2116292_-|tail	tail protein X	tail	E5G6M9	Salmonella_phage	70.1	1.8e-23
WP_012413677.1|2116291_2116783_-|head	head completion/stabilization protein	head	A0A1S5NNA6	Burkholderia_phage	50.3	3.3e-31
WP_012413678.1|2117017_2117671_-	hypothetical protein	NA	F1BUQ7	Erwinia_phage	47.7	7.8e-44
WP_012413679.1|2117677_2118733_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	62.8	1.9e-124
WP_012413680.1|2118769_2119585_-|capsid	GPO family capsid scaffolding protein	capsid	E5G6M5	Salmonella_phage	71.1	1.3e-75
WP_012413681.1|2119755_2121519_+	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	63.7	4.0e-228
WP_012413682.1|2121518_2122556_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	62.7	1.5e-129
WP_012413683.1|2122663_2122942_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413685.1|2123632_2123977_-	hypothetical protein	NA	H9C172	Pectobacterium_phage	40.7	5.0e-18
WP_012413686.1|2123973_2124204_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012413687.1|2124184_2126740_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	35.8	7.1e-125
WP_012413688.1|2126736_2127600_-	DNA cytosine methyltransferase	NA	W0LM09	Edwardsiella_phage	59.7	1.2e-105
WP_012413689.1|2127596_2128415_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	NA	A0A1S6L011	Salmonella_phage	55.5	7.4e-76
WP_012304179.1|2128411_2129065_-	3'-5' exonuclease	NA	A0A1D9C9N8	Salinivibrio_phage	61.2	1.5e-55
WP_012304178.1|2129121_2129883_-	hypothetical protein	NA	K7ZRM8	Xanthomonas_citri_phage	49.3	1.9e-09
WP_012304177.1|2129965_2130271_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012304176.1|2130301_2130562_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012304174.1|2130703_2131018_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012304173.1|2131014_2131221_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012304172.1|2131232_2131436_-	hypothetical protein	NA	U3PFJ1	Vibrio_phage	41.1	9.8e-06
WP_012304171.1|2131448_2131640_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011192328.1|2131700_2132069_+	helix-turn-helix domain-containing protein	NA	A0A2H4JFL3	uncultured_Caudovirales_phage	39.8	5.2e-13
WP_011192329.1|2132089_2133787_+	DUF4041 domain-containing protein	NA	A0A142LP25	Marinitoga_camini_virus	62.5	9.0e-76
WP_011192331.1|2134295_2134676_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413690.1|2135989_2136214_-|integrase	integrase	integrase	K7PLZ2	Enterobacterial_phage	76.8	6.6e-19
WP_032467056.1|2136146_2136662_-|integrase	integrase	integrase	H9C152	Pectobacterium_phage	67.5	1.6e-60
WP_002215401.1|2136772_2137000_+	replicative DNA helicase	NA	A0A192Y673	Salmonella_phage	57.7	2.1e-12
WP_002215404.1|2137369_2137516_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413693.1|2137759_2137933_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002213223.1|2138124_2138307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011192335.1|2138667_2139012_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_086025313.1|2139231_2140745_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
2140110:2140124	attR	TCGCCGTAGTTCTTT	NA	NA	NA	NA
WP_012413696.1|2141701_2142970_+	MFS transporter	NA	NA	NA	NA	NA
WP_011192338.1|2142966_2144700_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_011192339.1|2144689_2145415_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_011192340.1|2145402_2146257_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011192341.1|2146241_2147054_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_011192342.1|2147050_2148217_+	diaminopimelate decarboxylase	NA	NA	NA	NA	NA
WP_011192343.1|2148191_2148749_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011192346.1|2151266_2151521_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002215413.1|2152477_2152765_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213212.1|2152781_2153081_-	lysozyme	NA	A0A218M4K8	Erwinia_phage	64.9	2.6e-23
WP_011192348.1|2153077_2153437_-|plate	phage baseplate assembly protein V	plate	F1BUP5	Erwinia_phage	61.1	2.6e-17
>prophage 4
NC_010634	Yersinia pseudotuberculosis PB1/+, complete genome	4695619	3597009	3684117	4695619	head,portal,protease,terminase,tRNA,integrase,holin,tail,capsid	Cronobacter_phage(40.54%)	83	3608040:3608055	3661328:3661343
WP_012413886.1|3597009_3599301_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	40.6	1.1e-153
WP_002209924.1|3599700_3600099_-	type II toxin-antitoxin system MqsA family antitoxin	NA	NA	NA	NA	NA
WP_011192920.1|3600558_3600921_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_002214785.1|3600983_3601244_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5NR91	Burkholderia_phage	36.0	7.4e-06
WP_011055726.1|3601745_3602027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413889.1|3602168_3603152_-|integrase	tyrosine-type recombinase/integrase	integrase	Q83VS6	Escherichia_phage	59.9	2.6e-112
WP_012413890.1|3603218_3603518_-	helix-turn-helix transcriptional regulator	NA	Q1JS63	Enterobacteria_phage	59.6	6.7e-27
WP_011192923.1|3603631_3603904_+	hypothetical protein	NA	Q1JS60	Enterobacteria_phage	68.9	8.8e-34
WP_012413891.1|3603900_3604113_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413893.1|3604487_3604832_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413894.1|3604835_3605039_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012413895.1|3605181_3605403_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413896.1|3605411_3605762_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413897.1|3605833_3606070_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413898.1|3606069_3606735_+	DUF3850 domain-containing protein	NA	A0A1S6KVH3	Escherichia_phage	52.7	1.6e-12
WP_011192928.1|3606744_3607446_+	3'-5' exonuclease	NA	A2I2Z6	Vibrio_virus	52.7	8.6e-49
WP_012413900.1|3607792_3610288_+	replication endonuclease	NA	E5G6L9	Salmonella_phage	43.3	2.5e-175
3608040:3608055	attL	AACGTCAGCGATTTAT	NA	NA	NA	NA
WP_012413901.1|3610303_3610633_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA	NA
WP_071819120.1|3610636_3611734_-|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	61.5	3.7e-123
WP_012413904.1|3613769_3614705_+|capsid	phage capsid scaffolding protein	capsid	A5X9H4	Aeromonas_virus	54.3	3.5e-37
WP_012413905.1|3614787_3615954_+|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	50.3	6.2e-84
WP_012413906.1|3615968_3616712_+|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	53.2	2.6e-64
WP_012303715.1|3616831_3617284_+|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	52.7	2.8e-37
WP_012413907.1|3617280_3617787_+	hypothetical protein	NA	F1BUL7	Cronobacter_phage	38.9	4.6e-20
WP_012303713.1|3617746_3618448_+	hypothetical protein	NA	F1BUL6	Cronobacter_phage	43.8	3.3e-40
WP_012413908.1|3618444_3619611_+	DUF2586 family protein	NA	F1BUL5	Cronobacter_phage	52.2	2.5e-101
WP_011192940.1|3619613_3620069_+	DUF2597 family protein	NA	A5X9I1	Aeromonas_virus	58.3	7.0e-44
WP_012413909.1|3620078_3620381_+|holin	holin	holin	C7BGD7	Burkholderia_phage	39.3	1.7e-09
WP_012413910.1|3620377_3620719_+	M15 family metallopeptidase	NA	F1BUL3	Cronobacter_phage	78.2	2.2e-42
WP_012413911.1|3620718_3621093_+	hypothetical protein	NA	F1BUL2	Cronobacter_phage	40.2	3.2e-10
WP_011192944.1|3621207_3621483_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413912.1|3621527_3621707_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012413913.1|3621708_3623685_+|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	41.3	2.3e-131
WP_012413914.1|3623681_3624011_+	DUF2590 family protein	NA	Q94MY3	Haemophilus_virus	61.3	7.9e-29
WP_011192947.1|3624007_3625192_+	hypothetical protein	NA	F1BUK6	Cronobacter_phage	59.3	3.9e-134
WP_011192948.1|3625184_3625808_+	hypothetical protein	NA	F1BUK5	Cronobacter_phage	57.9	1.2e-57
WP_012413915.1|3625817_3627413_+|tail	phage tail protein	tail	F1BUK3	Cronobacter_phage	39.9	1.4e-54
WP_012413916.1|3627412_3627931_+|tail	tail assembly chaperone	tail	A9DEL3	Yersinia_phage	50.0	8.3e-41
WP_042592930.1|3627927_3628638_+	hypothetical protein	NA	Q94MX8	Haemophilus_virus	26.3	1.9e-11
WP_112473342.1|3628639_3629185_+	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	51.1	8.5e-36
WP_012413918.1|3629181_3630903_+	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	48.5	5.8e-123
WP_011192954.1|3631725_3632940_-|integrase	tyrosine-type recombinase/integrase	integrase	Q7M297	Enterobacteria_phage	58.8	3.7e-132
WP_002209930.1|3633372_3634890_-|tRNA	lysine--tRNA ligase	tRNA	A0A2K9L3L6	Tupanvirus	37.0	1.1e-85
WP_002228062.1|3634899_3635998_-	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.0	5.4e-05
WP_012413920.1|3636176_3637910_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.8	9.5e-65
WP_012413921.1|3637916_3638633_-	bifunctional protein-disulfide isomerase/oxidoreductase DsbC	NA	NA	NA	NA	NA
WP_002209933.1|3638663_3639563_-	site-specific tyrosine recombinase XerD	NA	A0A0K2CP59	Brevibacillus_phage	29.7	8.5e-33
WP_002209934.1|3639669_3640188_+	flavodoxin FldB	NA	NA	NA	NA	NA
WP_011192957.1|3640272_3641751_-	cell envelope integrity protein CreD	NA	NA	NA	NA	NA
WP_012413923.1|3641850_3643269_-	two-component system sensor histidine kinase CreC	NA	NA	NA	NA	NA
WP_002209937.1|3643293_3643992_-	two-component system response regulator CreB	NA	NA	NA	NA	NA
WP_012104676.1|3643991_3644417_-	membrane protein	NA	NA	NA	NA	NA
WP_002209939.1|3644397_3644664_-	FAD assembly factor SdhE	NA	NA	NA	NA	NA
WP_012413924.1|3644980_3645973_+|tRNA	tRNA-modifying protein YgfZ	tRNA	NA	NA	NA	NA
WP_002209941.1|3646045_3646543_-	DUF2165 family protein	NA	NA	NA	NA	NA
WP_012413925.1|3646817_3647519_-	hemolysin III family protein	NA	NA	NA	NA	NA
WP_072086139.1|3647720_3648866_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012413927.1|3648927_3651078_-	autotransporter adhesin YapN	NA	NA	NA	NA	NA
WP_002209946.1|3652136_3652574_-	lipocalin-like domain-containing protein	NA	NA	NA	NA	NA
WP_002209947.1|3652951_3655831_-	aminomethyl-transferring glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	52.3	1.7e-268
WP_002209948.1|3656042_3656429_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_002209949.1|3656497_3657595_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_012104673.1|3658292_3659513_-	FAD-dependent 2-octaprenylphenol hydroxylase	NA	NA	NA	NA	NA
WP_002209951.1|3659685_3660864_-	2-octaprenyl-6-methoxyphenyl hydroxylase	NA	NA	NA	NA	NA
WP_012413930.1|3660915_3662229_-	Xaa-Pro aminopeptidase	NA	NA	NA	NA	NA
3661328:3661343	attR	AACGTCAGCGATTTAT	NA	NA	NA	NA
WP_002209953.1|3662316_3662895_-	YecA family protein	NA	NA	NA	NA	NA
WP_002209954.1|3663231_3663561_+	cell division protein ZapA	NA	NA	NA	NA	NA
WP_012413931.1|3663906_3664503_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
WP_002209956.1|3664767_3666009_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	46.5	2.1e-98
WP_002209957.1|3666315_3666972_-	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
WP_002209958.1|3667313_3668222_+	LysR family transcriptional regulator ArgP	NA	NA	NA	NA	NA
WP_011192966.1|3668232_3669012_-	oxidative stress defense protein	NA	NA	NA	NA	NA
WP_002209960.1|3669201_3669819_-	arginine exporter ArgO	NA	NA	NA	NA	NA
WP_002209961.1|3670081_3670951_-	small-conductance mechanosensitive channel MscS	NA	NA	NA	NA	NA
WP_012413932.1|3671388_3672468_-	class II fructose-bisphosphate aldolase	NA	NA	NA	NA	NA
WP_002209963.1|3672587_3673751_-	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_002209964.1|3673853_3674870_-	erythrose-4-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_011192968.1|3675266_3677261_-	transketolase	NA	NA	NA	NA	NA
WP_011192969.1|3677734_3678487_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_002209968.1|3678591_3678912_-	non-heme iron oxygenase ferredoxin subunit	NA	NA	NA	NA	NA
WP_002209969.1|3679071_3681051_-	biosynthetic arginine decarboxylase	NA	NA	NA	NA	NA
WP_002209971.1|3682257_3683412_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	62.1	1.7e-126
WP_011192970.1|3683604_3684117_+|protease	SprT family zinc-dependent metalloprotease	protease	NA	NA	NA	NA
>prophage 5
NC_010634	Yersinia pseudotuberculosis PB1/+, complete genome	4695619	3967812	4000207	4695619	head,portal,terminase,tRNA,holin,tail,capsid	Cronobacter_phage(78.57%)	37	NA	NA
WP_002212201.1|3967812_3968826_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	57.7	6.5e-106
WP_001144069.1|3969238_3969454_+	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_002210358.1|3969589_3971338_+	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	38.2	8.7e-74
WP_002210359.1|3971495_3973334_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	33.3	1.9e-34
WP_012414004.1|3973775_3974606_+	abortive infection family protein	NA	NA	NA	NA	NA
WP_012414005.1|3974738_3974936_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012414006.1|3975111_3976767_-	hypothetical protein	NA	F1BUJ7	Cronobacter_phage	52.8	1.1e-166
WP_012303700.1|3976763_3977312_-	hypothetical protein	NA	F1BUJ9	Cronobacter_phage	63.7	6.3e-55
WP_012414007.1|3977277_3978009_-	hypothetical protein	NA	F1BUK1	Cronobacter_phage	39.6	9.9e-40
WP_049772382.1|3977998_3978406_-|tail	tail assembly chaperone	tail	NA	NA	NA	NA
WP_012414010.1|3980091_3980727_-	hypothetical protein	NA	F1BUK5	Cronobacter_phage	56.9	5.9e-57
WP_012303695.1|3980719_3981904_-	hypothetical protein	NA	F1BUK6	Cronobacter_phage	65.7	2.3e-150
WP_012303694.1|3981896_3982229_-	DUF2590 family protein	NA	F1BUK8	Cronobacter_phage	68.3	1.5e-35
WP_012414011.1|3982228_3984205_-|tail	phage tail tape measure protein	tail	F1BUK9	Cronobacter_phage	48.5	2.0e-172
WP_012303692.1|3984392_3984659_-	hypothetical protein	NA	A5X9I7	Aeromonas_virus	54.9	1.0e-18
WP_012303691.1|3984808_3985150_-	hypothetical protein	NA	F1BUL2	Cronobacter_phage	40.9	6.3e-13
WP_024063639.1|3985149_3985491_-	M15 family metallopeptidase	NA	F1BUL3	Cronobacter_phage	82.2	1.5e-43
WP_012303689.1|3985487_3985778_-|holin	holin	holin	Q6K1I2	Salmonella_virus	52.8	2.2e-14
WP_012303688.1|3985787_3986240_-	DUF2597 family protein	NA	F1BUL4	Cronobacter_phage	59.5	2.4e-44
WP_012414012.1|3986236_3987376_-	DUF2586 domain-containing protein	NA	F1BUL5	Cronobacter_phage	65.7	3.0e-136
WP_032467120.1|3987402_3988077_-	hypothetical protein	NA	F1BUL6	Cronobacter_phage	68.2	2.8e-81
WP_012414014.1|3988076_3988565_-|tail	phage tail protein	tail	F1BUL7	Cronobacter_phage	41.8	1.5e-31
WP_012414015.1|3988561_3989014_-|head	head completion/stabilization protein	head	F1BUL8	Cronobacter_phage	56.7	5.2e-39
WP_012414016.1|3989109_3989808_-|terminase	terminase	terminase	F1BUM0	Cronobacter_phage	52.6	2.5e-64
WP_012414017.1|3989818_3990850_-|capsid	phage major capsid protein, P2 family	capsid	F1BUM2	Cronobacter_phage	76.1	2.1e-144
WP_012414018.1|3990904_3991759_-|capsid	phage capsid scaffolding protein	capsid	F1BUM4	Cronobacter_phage	48.8	1.1e-66
WP_012414019.1|3991925_3993713_+	hypothetical protein	NA	F1BUM5	Cronobacter_phage	66.4	1.5e-235
WP_106439437.1|3993760_3994732_+|portal	phage portal protein	portal	F1BUM7	Cronobacter_phage	69.5	1.9e-139
WP_012414021.1|3994782_3995049_+	ogr/Delta-like zinc finger family protein	NA	F1BUM8	Cronobacter_phage	68.2	3.6e-32
WP_012414022.1|3995344_3997432_-	replication endonuclease	NA	F1BUM9	Cronobacter_phage	61.0	8.1e-228
WP_012414023.1|3997428_3997668_-	DUF2732 family protein	NA	NA	NA	NA	NA
WP_012414024.1|3997746_3998154_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012414025.1|3998163_3998538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012414026.1|3998540_3998744_-	DUF2724 domain-containing protein	NA	NA	NA	NA	NA
WP_012414027.1|3998751_3999261_-	hypothetical protein	NA	A0A1S6L008	Salmonella_phage	51.8	2.4e-40
WP_012414028.1|3999292_3999514_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012414029.1|3999628_4000207_+	phage repressor protein	NA	F1BUN8	Cronobacter_phage	32.8	2.1e-29
>prophage 1
NC_010635	Yersinia pseudotuberculosis PB1/+ plasmid pYPTS01, complete sequence	69812	21878	51736	69812	transposase,protease	Enterobacteria_phage(50.0%)	28	NA	NA
WP_002213244.1|21878_22196_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_002213246.1|22367_22826_-	hypothetical protein	NA	NA	NA	NA	NA
WP_042469136.1|22894_23164_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_106461760.1|23190_23490_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011191362.1|23492_24791_-	trimeric autotransporter adhesin YadA	NA	Q9MCI8	Enterobacteria_phage	54.2	2.0e-11
WP_002213256.1|25776_28092_-|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	51.6	1.0e-279
WP_002213258.1|28255_28807_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	80.3	5.9e-77
WP_012414143.1|28825_29290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002229829.1|29428_29758_+	hypothetical protein	NA	NA	NA	NA	NA
WP_086025330.1|29857_30956_+|transposase	IS3-like element ISYps8 family transposase	transposase	S5WIU1	Leptospira_phage	39.3	5.7e-47
WP_002213267.1|31104_31530_-	type III secretion system chaperone SycH	NA	NA	NA	NA	NA
WP_011191364.1|32302_33475_-|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	95.6	1.8e-221
WP_002213403.1|34089_34482_-	YopE transcriptional regulator YerA	NA	NA	NA	NA	NA
WP_002229754.1|34675_35335_+	type III secretion system effector GTPase activator YopE	NA	NA	NA	NA	NA
WP_002213360.1|35474_35774_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_012414146.1|35766_36009_-	type II toxin-antitoxin system ParD family antitoxin	NA	NA	NA	NA	NA
WP_155115732.1|36873_37290_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002404758.1|37449_38412_-	ParB/RepB/Spo0J family plasmid partition protein	NA	Q7Y3Y7	Yersinia_phage	56.6	3.1e-89
WP_002220902.1|38411_39578_-	plasmid-partitioning protein SopA	NA	Q7Y3Y6	Yersinia_phage	85.3	3.5e-196
WP_071819182.1|41591_42221_-	conjugal transfer protein TraT	NA	NA	NA	NA	NA
WP_011191373.1|42818_43367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011191374.1|43866_44835_+|protease	T3SS effector cysteine protease YopT	protease	NA	NA	NA	NA
WP_011191375.1|44834_45227_+	type III secretion system chaperone SycT	NA	NA	NA	NA	NA
WP_012414151.1|45270_45582_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011191376.1|45930_46350_+	hypothetical protein	NA	NA	NA	NA	NA
WP_071879997.1|47585_49238_-	T3SS effector E3 ubiquitin ligase YopM	NA	NA	NA	NA	NA
WP_011191379.1|49562_49778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002209743.1|50527_51736_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	50.8	5.4e-51
