The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_011527	Coxiella burnetii CbuG_Q212, complete sequence	2008870	67039	130080	2008870	integrase,transposase,protease	Streptococcus_phage(22.22%)	52	60810:60826	99058:99074
60810:60826	attL	GTCCCCGCCTGCGCGGG	NA	NA	NA	NA
WP_012569582.1|67039_67231_-|integrase	tyrosine-type recombinase/integrase	integrase	NA	NA	NA	NA
WP_032138231.1|67224_67440_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012569583.1|67432_68686_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
WP_094326024.1|68713_69076_-	hypothetical protein	NA	NA	NA	NA	NA
WP_050495260.1|70616_71549_-	RHS repeat protein	NA	B6SD27	Bacteriophage	36.9	3.5e-37
WP_032138232.1|71604_73122_-	hypothetical protein	NA	A0A1W5K0N1	Bacteriophage	40.6	1.8e-88
WP_012569584.1|73114_73342_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012569585.1|74274_74376_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005770527.1|77329_77518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043881145.1|78095_79115_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	2.3e-10
WP_012569588.1|79111_79384_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012569590.1|79955_81431_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	NA	M4QFZ1	Prochlorococcus_phage	41.3	7.0e-85
WP_005770511.1|81498_82839_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	NA	M4QFZ1	Prochlorococcus_phage	35.0	2.2e-45
WP_005770508.1|82841_83234_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
WP_032138241.1|83244_84336_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
WP_005770500.1|84521_86180_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	60.5	1.7e-175
WP_005770495.1|86207_86498_-	co-chaperone GroES	NA	A0A221S4A8	uncultured_virus	46.8	6.5e-19
WP_012569592.1|86619_89373_+	aconitate hydratase AcnA	NA	NA	NA	NA	NA
WP_005770491.1|89383_90094_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_193330753.1|90109_91135_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_080514499.1|91160_94445_-	AMP-binding protein	NA	A0A1V0SBX8	Catovirus	30.0	2.4e-32
WP_012569593.1|94526_96422_+	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
WP_005770468.1|99265_99730_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
99058:99074	attR	CCCGCGCAGGCGGGGAC	NA	NA	NA	NA
WP_012569594.1|99736_101083_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_012569595.1|101134_102145_-	ornithine cyclodeaminase	NA	A0A1V0SL93	Klosneuvirus	44.8	1.2e-75
WP_005772856.1|102137_102755_-	nicotinamide mononucleotide transporter	NA	A0A2R4ALR8	Aeromonas_phage	28.0	2.1e-06
WP_012569596.1|102789_103740_-	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_012569597.1|103829_104606_-	phosphoserine phosphatase	NA	NA	NA	NA	NA
WP_050495267.1|104676_105546_+	sodium-dependent transporter	NA	NA	NA	NA	NA
WP_124224288.1|105545_106028_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958401.1|106027_107194_+	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	42.6	2.5e-85
WP_012569598.1|109336_110050_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
WP_012569599.1|110052_111198_-	DUF2066 domain-containing protein	NA	NA	NA	NA	NA
WP_010958405.1|111225_112317_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	46.8	8.9e-77
WP_005770445.1|112313_112961_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	39.5	1.7e-27
WP_010958406.1|113046_113385_+	integration host factor subunit beta	NA	A3E2K9	Sodalis_phage	35.6	3.3e-06
WP_005770442.1|113350_114208_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	38.9	1.9e-45
WP_032138245.1|114476_115661_+	penicillin-binding protein activator	NA	NA	NA	NA	NA
WP_005770434.1|116080_116680_+	phosphoheptose isomerase	NA	A0A067XQR2	Caulobacter_phage	33.6	3.1e-15
WP_010958410.1|116679_117255_+	BON domain-containing protein	NA	NA	NA	NA	NA
WP_010958411.1|117785_118478_-|protease	site-2 protease family protein	protease	NA	NA	NA	NA
WP_012569602.1|118565_118970_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	46.3	5.0e-25
WP_010958413.1|118971_119634_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_005773029.1|119664_120084_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_012569603.1|120102_120531_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_032138246.1|120760_121210_+	HU family DNA-binding protein	NA	NA	NA	NA	NA
WP_012569606.1|121317_122580_+	Dot/Icm T4SS effector CoxDFB5	NA	NA	NA	NA	NA
WP_012569607.1|122615_123854_+	CBU_1752 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_005770409.1|124364_124961_-	CBU_1754 family Dot/Icm T4SS effector	NA	NA	NA	NA	NA
WP_012569608.1|124970_125096_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012569609.1|125142_126324_+	multidrug effflux MFS transporter	NA	NA	NA	NA	NA
WP_043881145.1|129060_130080_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	2.3e-10
>prophage 2
NC_011527	Coxiella burnetii CbuG_Q212, complete sequence	2008870	331526	387637	2008870	protease,transposase	Streptococcus_phage(50.0%)	54	NA	NA
WP_043881145.1|331526_332546_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	2.3e-10
WP_012569729.1|332777_334268_+	bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE	NA	E3SJ88	Synechococcus_phage	38.6	4.1e-16
WP_010958352.1|334292_334475_-	virulence factor	NA	NA	NA	NA	NA
WP_010957319.1|334671_334944_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043881145.1|334940_335960_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	2.3e-10
WP_011996534.1|336564_337695_-	phosphoesterase	NA	NA	NA	NA	NA
WP_012569731.1|337710_338169_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012569732.1|338165_338615_-	phosphoesterase	NA	NA	NA	NA	NA
WP_012569733.1|338804_339299_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012569734.1|339295_341740_+	type IVB secretion system protein DotA	NA	NA	NA	NA	NA
WP_010958348.1|341794_341890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010957319.1|342123_342396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_043881145.1|342392_343412_-|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	2.3e-10
WP_010958347.1|343588_344923_-	BCCT family transporter	NA	NA	NA	NA	NA
WP_005769572.1|344929_346048_-	Dot/Icm type IV secretion system ATPase DotB	NA	NA	NA	NA	NA
WP_012569735.1|346085_346910_-	type IV secretion system DotC family protein	NA	NA	NA	NA	NA
WP_010958345.1|346912_347422_-	type IVB secretion system lipoprotein DotD	NA	NA	NA	NA	NA
WP_012569736.1|347578_347917_-	IcmS	NA	NA	NA	NA	NA
WP_005769580.1|347916_348174_-	phosphoesterase	NA	NA	NA	NA	NA
WP_043881145.1|348364_349384_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	2.3e-10
WP_010957319.1|349380_349653_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012569737.1|351176_352382_+	ATP-binding protein	NA	NA	NA	NA	NA
WP_050495321.1|352740_353142_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958341.1|353977_354151_-	hypothetical protein	NA	NA	NA	NA	NA
WP_005769595.1|354266_354416_+	type IVB secretion system protein IcmR	NA	NA	NA	NA	NA
WP_012569738.1|354412_355129_+	Dot/Icm secretion system protein IcmQ	NA	NA	NA	NA	NA
WP_010958339.1|355129_356293_+	type IVB secretion system coupling complex protein DotM/IcmP	NA	NA	NA	NA	NA
WP_012569739.1|356268_358647_+	TraM recognition domain-containing protein	NA	NA	NA	NA	NA
WP_011996543.1|358656_359295_+	OmpA family protein	NA	NA	NA	NA	NA
WP_005769604.1|359301_359925_+	type IVB secretion system apparatus protein IcmL.2	NA	NA	NA	NA	NA
WP_010958336.1|359926_360583_+	type IVB secretion system apparatus protein IcmL.1	NA	NA	NA	NA	NA
WP_012569740.1|360593_361649_+	DotH/IcmK family type IV secretion protein	NA	NA	NA	NA	NA
WP_012569741.1|361635_364755_+	type IVB secretion system protein DotG/IcmE	NA	NA	NA	NA	NA
WP_005772726.1|364772_365507_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010958332.1|365577_366087_+	hypothetical protein	NA	NA	NA	NA	NA
WP_005769614.1|366180_366597_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012569742.1|366609_367248_+	HNH endonuclease	NA	NA	NA	NA	NA
WP_012569743.1|367320_370332_+	type IVa secretion system protein IcmB	NA	NA	NA	NA	NA
WP_005769621.1|370346_370484_-	hypothetical protein	NA	NA	NA	NA	NA
WP_148138181.1|370701_370914_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011996549.1|371291_371645_-	hypothetical protein	NA	NA	NA	NA	NA
WP_032138290.1|372201_372552_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012569747.1|375895_376924_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
WP_005769646.1|376926_377832_-	30S ribosomal protein S6--L-glutamate ligase	NA	I3ULC9	Synechococcus_phage	34.4	2.2e-36
WP_012569748.1|377828_378314_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
WP_005773037.1|378490_379036_+	porin family protein	NA	NA	NA	NA	NA
WP_032138288.1|379193_379796_-	hypothetical protein	NA	NA	NA	NA	NA
WP_043881151.1|379819_381379_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012569749.1|381496_381607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012569750.1|381730_383827_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.0	1.5e-35
WP_032138291.1|383946_385608_-	DNA primase	NA	A0A1S5RG58	Helicobacter_phage	29.2	3.2e-41
WP_005772128.1|385705_386155_-	CBU_1594 family Dot/Icm type IV secretion system effector	NA	A0A2I7SAL1	Vibrio_phage	31.6	1.8e-07
WP_005772127.1|386182_386407_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_043881145.1|386617_387637_+|transposase	IS110-like element IS1111A family transposase	transposase	M1NSC9	Streptococcus_phage	25.9	2.3e-10
>prophage 3
NC_011527	Coxiella burnetii CbuG_Q212, complete sequence	2008870	1657820	1666719	2008870		uncultured_Mediterranean_phage(28.57%)	10	NA	NA
WP_012570393.1|1657820_1658600_-	exodeoxyribonuclease III	NA	E3T4M6	Cafeteria_roenbergensis_virus	32.9	4.3e-33
WP_010957485.1|1658627_1659275_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_005771434.1|1660736_1662152_-	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	29.9	1.5e-52
WP_010957483.1|1662129_1662615_-	dUTP diphosphatase	NA	Q2NP83	Xanthomonas_phage	58.0	2.5e-47
WP_005771445.1|1663630_1663870_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
WP_005771448.1|1663880_1664093_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
WP_005771450.1|1664106_1664352_-	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	51.1	3.3e-16
WP_005771452.1|1664366_1664846_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.6	3.1e-26
WP_005771454.1|1664842_1665403_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	S4VNV0	Pandoravirus	39.2	4.5e-16
WP_012570396.1|1665402_1666719_-	polynucleotide adenylyltransferase PcnB	NA	G3MAR3	Bacillus_virus	31.7	3.3e-25
