assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000019625.1_ASM1962v1	NC_010483	Thermotoga sp. RQ2, complete sequence	1	544183-545204	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no		TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	Orphan	GTTTCAATACTTCCTTAGAGGTATGGAAAC,GTTTCAATAGTTCCTTAGAGGTATGGAAAC,GTTTCAATANTTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	15,15,15	15	Orphan	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	NA,NA	NA|185aa|up_9|NC_010483.1_533244_533799_+	COG1435, Tdk, Thymidine kinase [Nucleotide transport and metabolism]	NA|406aa|up_8|NC_010483.1_533782_535000_-	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|226aa|up_7|NC_010483.1_534980_535658_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|373aa|up_6|NC_010483.1_536058_537177_+	cd01907, GlxB, Glutamine amidotransferases class-II (Gn-AT)_GlxB-type	NA|508aa|up_5|NC_010483.1_537184_538708_+	COG0069, GltB, Glutamate synthase domain 2 [Amino acid transport and metabolism]	NA|152aa|up_4|NC_010483.1_538704_539160_+	cd10563, CooF_like, CooF, iron-sulfur subunit of carbon monoxide dehydrogenase	NA|426aa|up_3|NC_010483.1_539156_540434_+	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion]	NA|246aa|up_2|NC_010483.1_540421_541159_+	cd00981, arch_gltB, Archaeal-type gltB domain	NA|372aa|up_1|NC_010483.1_541185_542301_-	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism]	NA|407aa|up_0|NC_010483.1_542305_543526_-	cd03792, GT4_trehalose_phosphorylase, trehalose phosphorylase and similar proteins	NA|322aa|down_0|NC_010483.1_545313_546279_+	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion]	NA|444aa|down_1|NC_010483.1_546386_547718_+	TIGR03385, Coenzyme_A_disulfide_reductase, CoA-disulfide reductase	NA|112aa|down_2|NC_010483.1_547742_548078_+	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|450aa|down_3|NC_010483.1_548123_549473_+	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|221aa|down_4|NC_010483.1_549449_550112_-	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|167aa|down_5|NC_010483.1_550139_550640_+	cd02150, nitroreductase, nitroreductase family protein	NA|184aa|down_6|NC_010483.1_550765_551317_+	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|652aa|down_7|NC_010483.1_551282_553238_+	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|322aa|down_8|NC_010483.1_553319_554285_+	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD	NA|337aa|down_9|NC_010483.1_554281_555292_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]
GCF_000019625.1_ASM1962v1	NC_010483	Thermotoga sp. RQ2, complete sequence	2	557367-559006	2,2,2	CRISPRCasFinder,CRT,PILER-CR	no		TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	Orphan	GTTTCCATACCTCTAAGGAACTATTGAAAC,GTTTCCATACCTCTAAGGAACTATTGAAAC,GTTTCAATAGTTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	24,24,23	24	Orphan	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	NA,NA	NA|112aa|up_9|NC_010483.1_547742_548078_+	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]	NA|450aa|up_8|NC_010483.1_548123_549473_+	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase	NA|221aa|up_7|NC_010483.1_549449_550112_-	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair]	NA|167aa|up_6|NC_010483.1_550139_550640_+	cd02150, nitroreductase, nitroreductase family protein	NA|184aa|up_5|NC_010483.1_550765_551317_+	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein	NA|652aa|up_4|NC_010483.1_551282_553238_+	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional	NA|322aa|up_3|NC_010483.1_553319_554285_+	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD	NA|337aa|up_2|NC_010483.1_554281_555292_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|362aa|up_1|NC_010483.1_555284_556370_-	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms]	NA|302aa|up_0|NC_010483.1_556366_557272_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|242aa|down_0|NC_010483.1_559632_560358_+	pfam01925, TauE, Sulfite exporter TauE/SafE	NA|196aa|down_1|NC_010483.1_560436_561024_+	PRK15070, PRK15070, phosphate propanoyltransferase	NA|148aa|down_2|NC_010483.1_561053_561497_-	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]	NA|597aa|down_3|NC_010483.1_561512_563303_-	PRK00290, dnaK, molecular chaperone DnaK; Provisional	NA|1001aa|down_4|NC_010483.1_563536_566539_+	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms]	NA|153aa|down_5|NC_010483.1_566528_566987_-	TIGR01529, Arginine_repressor	NA|243aa|down_6|NC_010483.1_567158_567887_+	PRK04328, PRK04328, hypothetical protein; Provisional	NA|148aa|down_7|NC_010483.1_567883_568327_+	COG1318, COG1318, Predicted transcriptional regulators [Transcription]	NA|370aa|down_8|NC_010483.1_568336_569446_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|661aa|down_9|NC_010483.1_569585_571568_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]
GCF_000019625.1_ASM1962v1	NC_010483	Thermotoga sp. RQ2, complete sequence	3	590887-591315	3,3,3	CRISPRCasFinder,CRT,PILER-CR	no	cas14k	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	Unclear	GTTTCCATACCTCTAAGGAACTATTGAAAC,GTTTCCATACCTCTAAGGAA,GTTTCAATAGTTCCTTAGAGGTATGGAAAC	30,20,30	0	0	NA	NA	III-A:III-A:III-A	6,6,5	6	TypeV	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	NA|69aa|up_7|NC_010483.1_582695_582902_-,NA|54aa|down_8|NC_010483.1_600822_600984_-,NA|167aa|down_9|NC_010483.1_601005_601506_-	NA|357aa|up_9|NC_010483.1_580700_581771_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|303aa|up_8|NC_010483.1_581784_582693_-	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only]	NA|69aa|up_7|NC_010483.1_582695_582902_-	NA	NA|403aa|up_6|NC_010483.1_582983_584192_-	cd08186, Fe-ADH-like, Iron-containing alcohol dehydrogenase	NA|402aa|up_5|NC_010483.1_584273_585479_-	PRK08198, PRK08198, threonine dehydratase; Provisional	NA|329aa|up_4|NC_010483.1_585646_586633_+	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion]	NA|421aa|up_3|NC_010483.1_586648_587911_+	pfam02321, OEP, Outer membrane efflux protein	NA|336aa|up_2|NC_010483.1_587907_588915_+	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit	NA|235aa|up_1|NC_010483.1_588911_589616_+	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein	NA|405aa|up_0|NC_010483.1_589602_590817_+	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB	NA|145aa|down_0|NC_010483.1_592533_592968_-	PRK05395, PRK05395, type II 3-dehydroquinate dehydratase	NA|493aa|down_1|NC_010483.1_592964_594443_-	PRK13951, PRK13951, bifunctional shikimate kinase AroK/3-dehydroquinate synthase AroB	NA|377aa|down_2|NC_010483.1_594390_595521_-	TIGR00033, Chorismate_synthase, chorismate synthase	NA|254aa|down_3|NC_010483.1_595517_596279_-	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism]	NA|422aa|down_4|NC_010483.1_596275_597541_-	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional	NA|254aa|down_5|NC_010483.1_597537_598299_-	COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism]	NA|339aa|down_6|NC_010483.1_598295_599312_-	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed	NA|414aa|down_7|NC_010483.1_599568_600810_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|54aa|down_8|NC_010483.1_600822_600984_-	NA	NA|167aa|down_9|NC_010483.1_601005_601506_-	NA
GCF_000019625.1_ASM1962v1	NC_010483	Thermotoga sp. RQ2, complete sequence	4	974477-976309	4,4,4	CRISPRCasFinder,CRT,PILER-CR	no		TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	Orphan	GTTTCCATACCTCTAAGGAATTATTGAAAC,GTTTCCATACCTCTAAGGAA,GTTTCAATACTTCCTTAGAGGTATGGAAAC	30,20,30	0	0	NA	NA	III-A:III-A:III-A	27,27,27	27	Orphan	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	NA,NA	NA|279aa|up_9|NC_010483.1_964428_965265_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|254aa|up_8|NC_010483.1_965274_966036_-	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion]	NA|163aa|up_7|NC_010483.1_966239_966728_+	COG1905, NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion]	NA|127aa|up_6|NC_010483.1_966730_967111_+	COG3411, COG3411, Ferredoxin [Energy production and conversion]	NA|608aa|up_5|NC_010483.1_967129_968953_+	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion]	NA|143aa|up_4|NC_010483.1_968949_969378_+	COG1633, COG1633, Uncharacterized conserved protein [Function unknown]	NA|225aa|up_3|NC_010483.1_969413_970088_-	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism]	NA|439aa|up_2|NC_010483.1_970121_971438_+	pfam01841, Transglut_core, Transglutaminase-like superfamily	NA|346aa|up_1|NC_010483.1_971441_972479_+	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides	NA|651aa|up_0|NC_010483.1_972475_974428_+	TIGR00376, DNA-binding_protein_SMUBP-2, DNA helicase, putative	NA|509aa|down_0|NC_010483.1_976944_978471_-	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed	NA|250aa|down_1|NC_010483.1_978545_979295_+	COG1856, COG1856, Uncharacterized homolog of biotin synthetase [Function unknown]	NA|255aa|down_2|NC_010483.1_979278_980043_-	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain	NA|465aa|down_3|NC_010483.1_980077_981472_-	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed	NA|67aa|down_4|NC_010483.1_981568_981769_-	COG1278, CspC, Cold shock proteins [Transcription]	NA|389aa|down_5|NC_010483.1_982002_983169_+	cd00622, PLPDE_III_ODC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase	NA|133aa|down_6|NC_010483.1_983170_983569_-	pfam01894, UPF0047, Uncharacterized protein family UPF0047	NA|92aa|down_7|NC_010483.1_983584_983860_-	COG0851, MinE, Septum formation topological specificity factor [Cell division and chromosome partitioning]	NA|272aa|down_8|NC_010483.1_983864_984680_-	TIGR01968, Septum_site-determining_protein_MinD, septum site-determining protein MinD	NA|795aa|down_9|NC_010483.1_984779_987164_+	pfam13654, AAA_32, AAA domain
GCF_000019625.1_ASM1962v1	NC_010483	Thermotoga sp. RQ2, complete sequence	5	1062015-1064158	5,5,5	PILER-CR,CRISPRCasFinder,CRT	no	cas6,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas3,cas4,cas1,cas2,cmr1gr7,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,csa3	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	 Type III-B?,Type III-A,Type III-D,Type III-B,Type III-C,Type I-B	GTTTCAATAGTTCCTTAGAGGTATGGAAAC,GTTTCAATAGTTCCTTAGAGGTATGGAAAC,GTTTCAATANTTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	30,31,32	32	TypeIII-B?,TypeIII-A,TypeIII-D,TypeIII-B,TypeIII-C,TypeI-B	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	csx22|192aa|up_3|NC_010483.1_1059196_1059772_+,NA|272aa|up_2|NC_010483.1_1059753_1060569_-,NA|157aa|up_1|NC_010483.1_1060568_1061039_-,NA	csx1|549aa|up_9|NC_010483.1_1052198_1053845_+	cd09671, Csx1_III-U, CRISPR/Cas system-associated protein Csx1	cas10|718aa|up_8|NC_010483.1_1053865_1056019_+	TIGR02578, CRISPR-associated_protein_Cas10/Csm1, CRISPR-associated protein Cas10/Csm1, subtype III-A/MTUBE	csm2gr11|141aa|up_7|NC_010483.1_1056033_1056456_+	COG1421, COG1421, CRISPR system related protein [Defense mechanisms]	csm3gr7|248aa|up_6|NC_010483.1_1056469_1057213_+	cd09684, Csm3_III-A, CRISPR/Cas system-associated RAMP superfamily protein Csm3	csm4gr5|284aa|up_5|NC_010483.1_1057236_1058088_+	TIGR01903, Hypothetical_protein	csm5gr7|380aa|up_4|NC_010483.1_1058084_1059224_+	COG1332, COG1332, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	csx22|192aa|up_3|NC_010483.1_1059196_1059772_+	NA	NA|272aa|up_2|NC_010483.1_1059753_1060569_-	NA	NA|157aa|up_1|NC_010483.1_1060568_1061039_-	NA	NA|117aa|up_0|NC_010483.1_1061029_1061380_-	smart00271, DnaJ, DnaJ molecular chaperone homology domain	cas8b1|546aa|down_0|NC_010483.1_1064227_1065865_+	TIGR02556, hypothetical_protein_MM_0564, CRISPR-associated protein, TM1802 family	cas7|300aa|down_1|NC_010483.1_1065839_1066739_+	TIGR02590, hypothetical_protein_MM_0563, CRISPR-associated protein Cas7/Csh2, subtype I-B/HMARI	cas5|221aa|down_2|NC_010483.1_1066741_1067404_+	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI	cas3|722aa|down_3|NC_010483.1_1067394_1069560_+	COG1203, COG1203, CRISPR-associated helicase Cas3 [Defense mechanisms]	cas4|160aa|down_4|NC_010483.1_1069556_1070036_+	pfam01930, Cas_Cas4, Domain of unknown function DUF83	cas1|320aa|down_5|NC_010483.1_1070045_1071005_+	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1	cas2|88aa|down_6|NC_010483.1_1071018_1071282_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	cmr1gr7|436aa|down_7|NC_010483.1_1071265_1072573_+	COG1367, COG1367, CRISPR system related protein, RAMP superfamily [Defense mechanisms]	cas10|813aa|down_8|NC_010483.1_1072575_1075014_+	COG1353, COG1353, Predicted CRISPR-associated polymerase [Defense mechanisms]	cmr3gr5|331aa|down_9|NC_010483.1_1075010_1076003_+	COG1769, COG1769, CRISPR system related protein, RAMP superfamily [Defense    mechanisms]
GCF_000019625.1_ASM1962v1	NC_010483	Thermotoga sp. RQ2, complete sequence	6	1223301-1224329	6,6,6	PILER-CR,CRISPRCasFinder,CRT	no		TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	Orphan	GTTTCAATACTTCCTTAGAGGTATGGAAAC,GTTTCAATACTTCCTTAGAGGTATGGAAAC,GTTTCAATACTTCCTTAGAGGTATGGAAAC	30,30,30	0	0	NA	NA	III-A:III-A:III-A	14,15,15	15	Orphan	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	NA|219aa|up_4|NC_010483.1_1219093_1219750_+,NA	NA|554aa|up_9|NC_010483.1_1213234_1214896_+	pfam09992, NAGPA, Phosphodiester glycosidase	NA|684aa|up_8|NC_010483.1_1214895_1216947_+	PRK12740, PRK12740, elongation factor G-like protein EF-G2	NA|423aa|up_7|NC_010483.1_1216948_1218217_+	cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase)	NA|94aa|up_6|NC_010483.1_1218231_1218513_+	COG1550, COG1550, Uncharacterized protein conserved in bacteria [Function unknown]	NA|199aa|up_5|NC_010483.1_1218513_1219110_+	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism]	NA|219aa|up_4|NC_010483.1_1219093_1219750_+	NA	NA|153aa|up_3|NC_010483.1_1219746_1220205_+	COG1728, COG1728, Uncharacterized protein conserved in bacteria [Function unknown]	NA|274aa|up_2|NC_010483.1_1220195_1221017_-	TIGR00078, Probable_nicotinate-nucleotide_pyrophosphorylase, nicotinate-nucleotide pyrophosphorylase	NA|299aa|up_1|NC_010483.1_1221021_1221918_-	PRK09375, PRK09375, quinolinate synthase NadA	NA|242aa|up_0|NC_010483.1_1221930_1222656_-	PRK13303, PRK13303, aspartate dehydrogenase	NA|259aa|down_0|NC_010483.1_1224464_1225241_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|275aa|down_1|NC_010483.1_1225237_1226062_+	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12	NA|146aa|down_2|NC_010483.1_1226181_1226619_+	COG1633, COG1633, Uncharacterized conserved protein [Function unknown]	NA|141aa|down_3|NC_010483.1_1226580_1227003_-	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein	NA|290aa|down_4|NC_010483.1_1227030_1227900_+	COG1575, MenA, 1,4-dihydroxy-2-naphthoate octaprenyltransferase [Coenzyme metabolism]	NA|207aa|down_5|NC_010483.1_1227905_1228526_+	pfam02517, Abi, CAAX protease self-immunity	NA|286aa|down_6|NC_010483.1_1228627_1229485_+	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion]	NA|339aa|down_7|NC_010483.1_1229477_1230494_+	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion]	NA|439aa|down_8|NC_010483.1_1230490_1231807_+	COG0644, FixC, Dehydrogenases (flavoproteins) [Energy production and conversion]	NA|93aa|down_9|NC_010483.1_1231813_1232092_+	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion]
GCF_000019625.1_ASM1962v1	NC_010483	Thermotoga sp. RQ2, complete sequence	7	1335694-1336249	7,7,7	PILER-CR,CRISPRCasFinder,CRT	no		TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	Orphan	GTTTCAATACTTCCTTAGAGGTATGGAAAC,GTTTCCATACCTCTAAGGAATTATTGAAAC,GTTTCCATACCTCTAAGGAA	30,30,20	0	0	NA	NA	III-A:III-A:III-A	8,8,8	8	Orphan	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	NA|129aa|up_8|NC_010483.1_1325940_1326327_+,NA	NA|788aa|up_9|NC_010483.1_1323580_1325944_+	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones]	NA|129aa|up_8|NC_010483.1_1325940_1326327_+	NA	NA|383aa|up_7|NC_010483.1_1326328_1327477_+	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair]	NA|853aa|up_6|NC_010483.1_1327466_1330025_+	COG0419, SbcC, ATPase involved in DNA repair [DNA replication, recombination, and repair]	NA|207aa|up_5|NC_010483.1_1330017_1330638_+	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion]	NA|207aa|up_4|NC_010483.1_1330655_1331276_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|278aa|up_3|NC_010483.1_1331259_1332093_+	PRK06222, PRK06222, sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein	NA|469aa|up_2|NC_010483.1_1332089_1333496_+	PRK12831, PRK12831, putative oxidoreductase; Provisional	NA|170aa|up_1|NC_010483.1_1333483_1333993_+	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism]	NA|528aa|up_0|NC_010483.1_1334028_1335612_+	PRK13376, pyrB, bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional	NA|433aa|down_0|NC_010483.1_1336818_1338117_-	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]	NA|257aa|down_1|NC_010483.1_1338118_1338889_-	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism]	NA|319aa|down_2|NC_010483.1_1339045_1340002_-	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones]	NA|244aa|down_3|NC_010483.1_1339998_1340730_-	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]	NA|206aa|down_4|NC_010483.1_1340762_1341380_-	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism]	NA|242aa|down_5|NC_010483.1_1341373_1342099_-	COG1213, COG1213, Predicted sugar nucleotidyltransferases [Cell envelope biogenesis, outer membrane]	NA|383aa|down_6|NC_010483.1_1342139_1343288_-	COG1260, INO1, Myo-inositol-1-phosphate synthase [Lipid metabolism]	NA|76aa|down_7|NC_010483.1_1343554_1343782_+	COG1905, NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion]	NA|522aa|down_8|NC_010483.1_1343774_1345340_+	COG4624, COG4624, Iron only hydrogenase large subunit, C-terminal domain [General function prediction only]	NA|380aa|down_9|NC_010483.1_1345326_1346466_+	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE)
GCF_000019625.1_ASM1962v1	NC_010483	Thermotoga sp. RQ2, complete sequence	8	1427022-1427251	8	CRISPRCasFinder	no		TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	Orphan	GTTTCAATAATTCCTTAGAGGTATGGAAAC	30	0	0	NA	NA	III-A	3	3	Orphan	TnpB_regular.1,cas14k,cmr1gr7,cmr6gr7,cas10,cmr4gr7,cmr5gr11,cmr3gr5,DEDDh,WYL,cas3,cas3HD,cas6,csx1,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas8b1,cas7,cas5,cas4,cas1,cas2,csa3,cas14j	NA|131aa|up_9|NC_010483.1_1417903_1418296_-,NA|139aa|down_0|NC_010483.1_1427620_1428037_+,NA|279aa|down_5|NC_010483.1_1435036_1435873_+,NA|51aa|down_9|NC_010483.1_1439195_1439348_+	NA|131aa|up_9|NC_010483.1_1417903_1418296_-	NA	NA|137aa|up_8|NC_010483.1_1418292_1418703_-	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism]	NA|358aa|up_7|NC_010483.1_1418717_1419791_-	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family	NA|387aa|up_6|NC_010483.1_1419791_1420952_-	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase	NA|402aa|up_5|NC_010483.1_1420961_1422167_-	PRK06635, PRK06635, aspartate kinase; Reviewed	NA|234aa|up_4|NC_010483.1_1422182_1422884_-	TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase	NA|217aa|up_3|NC_010483.1_1422885_1423536_-	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism]	NA|295aa|up_2|NC_010483.1_1423532_1424417_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|237aa|up_1|NC_010483.1_1424401_1425112_-	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism]	NA|326aa|up_0|NC_010483.1_1425116_1426094_-	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional	NA|139aa|down_0|NC_010483.1_1427620_1428037_+	NA	NA|324aa|down_1|NC_010483.1_1429389_1430361_-	TIGR01370, Uncharacterized_protein_DR_0705, extracellular protein	NA|717aa|down_2|NC_010483.1_1430361_1432512_+	pfam09960, DUF2194, Uncharacterized protein conserved in bacteria (DUF2194)	NA|459aa|down_3|NC_010483.1_1432501_1433878_+	COG4267, COG4267, Predicted membrane protein [Function unknown]	NA|399aa|down_4|NC_010483.1_1433874_1435071_+	pfam01590, GAF, GAF domain	NA|279aa|down_5|NC_010483.1_1435036_1435873_+	NA	NA|469aa|down_6|NC_010483.1_1435805_1437212_-	cd03813, GT4-like, glycosyltransferase family 4 proteins	NA|257aa|down_7|NC_010483.1_1437300_1438071_-	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein	NA|328aa|down_8|NC_010483.1_1438075_1439059_-	cd03265, ABC_DrrA, Daunorubicin/doxorubicin resistance ATP-binding protein	NA|51aa|down_9|NC_010483.1_1439195_1439348_+	NA
