The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	7737	48947	5238555	protease,transposase	Ralstonia_phage(40.0%)	37	NA	NA
WP_012443554.1|7737_8574_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_012443555.1|8760_9567_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_011257013.1|9843_11037_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011257014.1|11190_11862_+	TonB family protein	NA	NA	NA	NA	NA
WP_011257015.1|11946_12708_+	TonB-system energizer ExbB	NA	NA	NA	NA	NA
WP_010364790.1|12754_13177_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_011257016.1|13180_13594_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_011257017.1|13889_14657_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
WP_019301610.1|14667_14937_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257019.1|15011_16472_-	cardiolipin synthase	NA	NA	NA	NA	NA
WP_011257020.1|17118_18129_-	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	37.8	9.5e-49
WP_011257021.1|18400_19603_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
WP_011407169.1|19744_21883_+	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	40.9	5.3e-65
WP_012443560.1|22093_22387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153296734.1|22418_22916_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257024.1|23162_24143_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	55.8	1.6e-88
WP_011257025.1|24190_25357_-	FMN-dependent L-lactate dehydrogenase LldD	NA	NA	NA	NA	NA
WP_012443565.1|27545_28763_+	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA	NA
WP_012443568.1|29383_30406_-	sugar kinase	NA	NA	NA	NA	NA
WP_080493590.1|30986_32240_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_094187728.1|32313_33111_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_157724563.1|33098_34073_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_012443571.1|34957_35620_-	DUF938 domain-containing protein	NA	NA	NA	NA	NA
WP_012443572.1|35773_36568_-	EcsC family protein	NA	NA	NA	NA	NA
WP_027704023.1|36735_37209_+	SRPBCC domain-containing protein	NA	NA	NA	NA	NA
WP_041182297.1|39434_40397_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
WP_012443578.1|40883_41282_-	host attachment protein	NA	NA	NA	NA	NA
WP_012443579.1|41373_42066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027704036.1|42235_42706_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
WP_011257044.1|42821_42998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407233.1|44172_44484_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407232.1|44738_45686_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.7	6.6e-44
WP_165352019.1|45826_46846_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011257048.1|47011_47293_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443586.1|47345_47606_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443587.1|47697_47883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407229.1|47996_48947_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.9	3.0e-97
>prophage 2
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	91919	147636	5238555	transposase	Ostreococcus_lucimarinus_virus(14.29%)	42	NA	NA
WP_094187710.1|91919_92682_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011407202.1|92689_94414_-	AarF/ABC1/UbiB kinase family protein	NA	A0A0P0CRE2	Ostreococcus_lucimarinus_virus	28.7	1.7e-34
WP_011257102.1|94654_95596_+	DUF808 domain-containing protein	NA	NA	NA	NA	NA
WP_041182540.1|95788_97153_+	glycoside hydrolase family 10 protein	NA	NA	NA	NA	NA
WP_011257104.1|97149_98778_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
WP_041182541.1|99251_100835_+	glycogen synthase GlgA	NA	NA	NA	NA	NA
WP_041182542.1|100831_103066_+	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA	NA
WP_011257107.1|103068_104826_+	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
WP_094187819.1|104882_106772_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
WP_012443627.1|106768_109378_+	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
WP_011407199.1|109400_109586_+	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
WP_011257110.1|109700_111863_+	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_027703730.1|111879_112512_+	NAD(P)H-binding protein	NA	NA	NA	NA	NA
WP_075244499.1|112675_113173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407197.1|113313_114360_-	methylamine utilization protein	NA	NA	NA	NA	NA
WP_125168734.1|115707_115986_+	RHS repeat protein	NA	NA	NA	NA	NA
WP_115877336.1|115982_116948_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_012443633.1|117042_118056_+	RHS repeat protein	NA	NA	NA	NA	NA
WP_012443634.1|118036_120439_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_080256644.1|120554_121013_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027704081.1|121012_121345_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443635.1|121361_121622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024743401.1|122945_124355_+	FAD/NAD(P)-binding protein	NA	NA	NA	NA	NA
WP_011407187.1|124703_125135_+	VirK family protein	NA	NA	NA	NA	NA
WP_012443638.1|125409_125745_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407184.1|126184_127474_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.2	2.1e-40
WP_012443641.1|128092_129073_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	55.0	1.0e-87
WP_012443642.1|129538_129862_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443643.1|129803_130046_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115877337.1|130421_131387_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_012443646.1|133058_134435_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	56.9	4.1e-79
WP_129215536.1|135036_135744_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	22.6	2.6e-05
WP_011407176.1|135740_136877_-	hypothetical protein	NA	NA	NA	NA	NA
WP_147213241.1|137126_137729_-	HEAT repeat domain-containing protein	NA	NA	NA	NA	NA
WP_041182545.1|137712_138669_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
WP_147213183.1|138721_139090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_161798561.1|139333_140140_-	HEAT repeat domain-containing protein	NA	NA	NA	NA	NA
WP_011257143.1|140331_141585_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011407239.1|142808_143498_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	1.3e-36
WP_011257145.1|143510_144668_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
WP_011257146.1|144680_145991_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_115877338.1|146670_147636_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
>prophage 3
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	174435	231077	5238555	transposase,tRNA	Acidithiobacillus_phage(28.57%)	31	NA	NA
WP_115877339.1|174435_175401_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_115877340.1|176913_178233_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_048488785.1|178500_179877_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	53.7	9.5e-76
WP_027703863.1|181278_182337_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_103057315.1|182480_182576_-	xylosidase	NA	NA	NA	NA	NA
WP_041181912.1|182551_183079_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012443681.1|183901_186085_-	1,4-alpha-glucan branching protein GlgB	NA	NA	NA	NA	NA
WP_027703861.1|186096_189447_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
WP_011257178.1|189443_192560_-	DUF3416 domain-containing protein	NA	NA	NA	NA	NA
WP_109181928.1|194513_195479_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_094187821.1|197104_197284_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080494036.1|197286_197613_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443686.1|197682_197796_+	hemagglutinin repeat-containing protein	NA	NA	NA	NA	NA
WP_012443687.1|197878_199354_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	67.1	2.8e-102
WP_115877341.1|200976_202296_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_012443690.1|202439_203960_-	YifB family Mg chelatase-like AAA ATPase	NA	NA	NA	NA	NA
WP_011257185.1|203976_204255_-	accessory factor UbiK family protein	NA	NA	NA	NA	NA
WP_033013476.1|204444_204783_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_012443692.1|205395_207381_+	beta-N-acetylglucosaminidase domain-containing protein	NA	NA	NA	NA	NA
WP_011409560.1|208012_208975_+|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
WP_011257188.1|209380_210193_+	outer membrane beta-barrel protein	NA	NA	NA	NA	NA
WP_011257189.1|210385_210997_+	PH domain-containing protein	NA	NA	NA	NA	NA
WP_011257190.1|211413_212271_-	polyamine aminopropyltransferase	NA	A0A1C9C533	Heterosigma_akashiwo_virus	31.5	2.9e-14
WP_012443696.1|212508_214395_+	arginine decarboxylase	NA	NA	NA	NA	NA
WP_011407587.1|214765_215800_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
WP_012443698.1|217835_220556_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	30.2	2.8e-71
WP_012443699.1|220621_222766_+	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	28.1	2.0e-27
WP_012443700.1|222762_224445_+	DUF2875 family protein	NA	NA	NA	NA	NA
WP_012443702.1|224764_226966_+	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	28.4	1.5e-19
WP_012443703.1|226962_228639_+	DUF2875 family protein	NA	NA	NA	NA	NA
WP_012443704.1|229172_231077_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
>prophage 4
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	266735	316733	5238555	tail,transposase	Arthrobacter_phage(27.27%)	41	NA	NA
WP_099051259.1|266735_267837_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	2.5e-42
WP_041182294.1|268611_269574_+|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
WP_115877391.1|271641_272607_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_012443726.1|273285_274323_-	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_011260790.1|274830_275841_-	TIGR00266 family protein	NA	NA	NA	NA	NA
WP_041182555.1|276029_276875_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.7	3.7e-06
WP_011260788.1|277034_278240_+	fatty acid desaturase	NA	NA	NA	NA	NA
WP_011409775.1|278292_278625_+	EF-hand domain-containing protein	NA	NA	NA	NA	NA
WP_011409774.1|278673_279411_+	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	31.1	1.5e-19
WP_041182556.1|279407_280880_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_011260784.1|281166_282348_-	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
WP_011409772.1|282419_283703_+	ergothioneine biosynthesis protein EgtB	NA	NA	NA	NA	NA
WP_012443732.1|283699_284686_+	L-histidine N(alpha)-methyltransferase	NA	NA	NA	NA	NA
WP_011260781.1|284730_286008_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
WP_011260780.1|286004_286625_-	helix-turn-helix transcriptional regulator	NA	A0A0K1LLP9	Caulobacter_phage	41.9	1.9e-07
WP_012443733.1|286767_290475_-	indolepyruvate ferredoxin oxidoreductase family protein	NA	NA	NA	NA	NA
WP_033013610.1|290669_291032_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443735.1|291128_291305_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260776.1|291566_292484_+	AEC family transporter	NA	NA	NA	NA	NA
WP_011409768.1|292836_293469_+	ParA family protein	NA	A0A142F1W4	Mycobacterium_phage	36.6	1.6e-09
WP_011409767.1|293484_293961_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_011260773.1|293964_294537_+	YceI family protein	NA	NA	NA	NA	NA
WP_011260772.1|294533_296549_+	phospholipase D family protein	NA	NA	NA	NA	NA
WP_011260771.1|296812_297241_+	hotdog fold thioesterase	NA	NA	NA	NA	NA
WP_011409766.1|297360_298164_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
WP_011260769.1|298223_299213_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_011409765.1|299626_301699_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_011409764.1|301893_302505_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_011260766.1|303658_304465_-	META domain-containing protein	NA	NA	NA	NA	NA
WP_011260765.1|304601_305399_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_011260764.1|305620_307030_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_011260763.1|307307_307646_+	P-II family nitrogen regulator	NA	NA	NA	NA	NA
WP_012443742.1|307668_309111_+	ammonium transporter	NA	H8ZJB2	Ostreococcus_tauri_virus	32.2	2.0e-31
WP_011260761.1|309381_310437_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_011409760.1|310429_311857_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
WP_012443745.1|312355_312958_+	superoxide dismutase family protein	NA	I3XM75	Mamestra_brassicae_nuclear_polyhedrosis_virus	40.6	7.7e-14
WP_027704180.1|313028_313661_+	superoxide dismutase family protein	NA	M1ICI8	Paramecium_bursaria_Chlorella_virus	41.0	7.8e-17
WP_109182045.1|313943_314909_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011260755.1|314996_315533_-|tail	phage tail protein	tail	A0A0U4JYA4	Arthrobacter_phage	32.1	1.2e-10
WP_011260754.1|315591_316119_-|tail	phage tail protein	tail	A0A218M5J0	Arthrobacter_phage	33.1	1.2e-15
WP_011409756.1|316187_316733_-|tail	phage tail protein	tail	A0A0U4JXW2	Arthrobacter_phage	32.9	1.9e-11
>prophage 5
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	341541	415485	5238555	transposase,tRNA	Staphylococcus_prophage(16.67%)	48	NA	NA
WP_011409552.1|341541_342504_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
WP_113341542.1|342630_342846_+	immunity 52 family protein	NA	NA	NA	NA	NA
WP_011260739.1|343054_343303_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_042465346.1|343464_343731_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260735.1|345547_346411_+	DUF2884 family protein	NA	NA	NA	NA	NA
WP_011409738.1|346659_347088_-	organic hydroperoxide resistance protein	NA	NA	NA	NA	NA
WP_011260733.1|347189_347648_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041182856.1|349114_350071_-|transposase	IS30-like element IS1112 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.3	6.9e-41
WP_115877343.1|350173_351493_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_094187713.1|351621_352419_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011260727.1|352452_353133_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA	NA
WP_012443767.1|353225_354302_+	ferredoxin reductase	NA	NA	NA	NA	NA
WP_011260725.1|354311_355433_+	acyl-CoA desaturase	NA	NA	NA	NA	NA
WP_113090107.1|355498_356488_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_094187715.1|356616_357380_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_010374782.1|358260_358437_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094187716.1|359312_360111_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011260718.1|360527_361562_-	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
WP_027703497.1|361593_363081_-	MFS transporter	NA	NA	NA	NA	NA
WP_011409727.1|363179_366113_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_012443772.1|366574_367876_+	MFS transporter	NA	NA	NA	NA	NA
WP_011409725.1|369292_370270_+	endo-1,4-beta-xylanase	NA	NA	NA	NA	NA
WP_027703494.1|370310_371729_+	glucuronate isomerase	NA	NA	NA	NA	NA
WP_012443777.1|371955_373011_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260709.1|373988_375461_-	mannitol dehydrogenase family protein	NA	G8DCZ3	Micromonas_pusilla_virus	32.1	4.5e-47
WP_012443780.1|375683_378398_-	glycoside hydrolase family 3 protein	NA	NA	NA	NA	NA
WP_011260707.1|378400_380101_-	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
WP_012443782.1|380100_381360_-	D-galactonate dehydratase family protein	NA	Q6A202	Oenococcus_phage	26.0	3.5e-40
WP_041182560.1|381371_383336_-	9-O-acetylesterase	NA	NA	NA	NA	NA
WP_012443784.1|383332_385528_-	alpha-glucuronidase	NA	NA	NA	NA	NA
WP_011409721.1|385703_386771_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_011259480.1|386996_388334_-	xylose isomerase	NA	NA	NA	NA	NA
WP_012443789.1|388937_389855_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	62.5	4.1e-83
WP_011260701.1|389918_390824_+	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	32.9	3.1e-43
WP_011409719.1|391450_392236_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_075239583.1|393046_393802_-	alpha/beta hydrolase	NA	G1DB77	Mycobacterium_phage	35.2	9.7e-06
WP_011409716.1|393899_394865_-	ferrochelatase	NA	NA	NA	NA	NA
WP_011409715.1|395019_395922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003484969.1|395994_396222_+	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA	NA
WP_041182561.1|396237_396879_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_011260694.1|396875_397631_+	twin-arginine translocase subunit TatC	NA	NA	NA	NA	NA
WP_012443793.1|397782_398682_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011409712.1|398741_399494_-	glutamine amidotransferase	NA	NA	NA	NA	NA
WP_094187753.1|400037_400836_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_048488786.1|400976_409760_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260689.1|410145_411960_-	type II/IV secretion system protein	NA	NA	NA	NA	NA
WP_012443796.1|412049_412958_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_012443798.1|413247_415485_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
>prophage 6
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	535350	579701	5238555	transposase	Vibrio_phage(20.0%)	29	NA	NA
WP_109181928.1|535350_536316_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_082356997.1|537297_537879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042465293.1|537981_538167_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260591.1|538176_538800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011409642.1|539228_540149_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
WP_011260589.1|540148_540667_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011260588.1|540828_543654_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA	NA
WP_048488787.1|543749_544037_-	VUT family protein	NA	A0A2I7SAW6	Vibrio_phage	31.6	8.2e-06
WP_094187715.1|544313_545076_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_027703830.1|548432_548933_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011409634.1|549839_550787_-	mitochondrial fission ELM1 family protein	NA	NA	NA	NA	NA
WP_012443887.1|550920_551511_+	malonic semialdehyde reductase	NA	NA	NA	NA	NA
WP_012443888.1|551721_552486_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
WP_011260579.1|552971_553391_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_012443890.1|553387_553819_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_041182564.1|553815_555822_-	SpoIIE family protein phosphatase	NA	NA	NA	NA	NA
WP_033013372.1|556039_556387_+	hypothetical protein	NA	NA	NA	NA	NA
WP_146033612.1|556603_556810_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260575.1|556802_556907_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_012443895.1|556903_557416_+|transposase	transposase	transposase	Q8W6R2	Burkholderia_virus	69.5	5.5e-45
WP_041182565.1|559109_563027_-	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_011409622.1|566349_569037_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
WP_125168769.1|569226_570132_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011409620.1|570128_570863_+	HIRAN domain-containing protein	NA	NA	NA	NA	NA
WP_099051315.1|570968_572070_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.5	5.2e-40
WP_011409617.1|572428_572719_-	DUF2782 domain-containing protein	NA	NA	NA	NA	NA
WP_012443905.1|572795_575597_+	DNA polymerase I	NA	A0A218MKQ4	uncultured_virus	30.4	2.4e-65
WP_011260560.1|576544_577444_-	oxygen-dependent coproporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_041182568.1|578558_579701_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	6.2e-97
>prophage 7
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	589904	725666	5238555	transposase,integrase,tRNA	Leptospira_phage(15.79%)	114	684373:684389	722454:722470
WP_041182569.1|589904_591281_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.8	1.1e-76
WP_011260548.1|591515_591674_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_012443914.1|591738_592749_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A0E3FNQ3	Synechococcus_phage	32.2	4.5e-14
WP_011260546.1|592977_594648_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_011409606.1|594966_595350_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA	NA
WP_011260544.1|595571_596474_-	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_012443916.1|596470_598972_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_012443917.1|598973_600605_-	site-specific DNA-methyltransferase	NA	A0A2K5B2C1	Erysipelothrix_phage	37.5	1.7e-63
WP_011260541.1|600601_601765_-	Fic family protein	NA	NA	NA	NA	NA
WP_011260540.1|601836_602853_-	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
WP_010370565.1|602954_603275_-	DUF4156 domain-containing protein	NA	NA	NA	NA	NA
WP_011409604.1|603660_604122_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260538.1|604148_604625_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_011260537.1|604966_606190_-	MFS transporter	NA	NA	NA	NA	NA
WP_011260536.1|606294_606906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012443920.1|607007_607751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011260534.1|607941_609288_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_011260533.1|609272_610715_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_012443921.1|610764_612492_-	ubiquinone-dependent pyruvate dehydrogenase	NA	NA	NA	NA	NA
WP_041182570.1|612849_613446_+	Ax21 family protein	NA	NA	NA	NA	NA
WP_011409602.1|613768_614794_-	NAD(P)-dependent glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_011260529.1|614809_615325_-	protein-export chaperone SecB	NA	NA	NA	NA	NA
WP_011260528.1|615434_615869_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
WP_011409601.1|615944_616367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027703675.1|616395_616866_-	YiiD C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_041182571.1|617328_618294_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_115877345.1|618712_619678_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_011409598.1|620422_621790_+	VOC family protein	NA	NA	NA	NA	NA
WP_011409597.1|622079_625220_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_012443930.1|625353_628602_-	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_012443931.1|628694_629939_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011407587.1|630198_631233_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
WP_011409596.1|631314_632631_+	amidohydrolase	NA	NA	NA	NA	NA
WP_011260517.1|633389_634205_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	35.8	7.4e-36
WP_041182574.1|636013_636970_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.1	4.5e-40
WP_027704002.1|638789_640502_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011409585.1|640691_642923_+	NADP-dependent isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_094187806.1|643526_644629_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.5	1.1e-39
WP_075240081.1|644677_645352_-	conjugal transfer protein TraG N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011409581.1|646057_646639_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	59.3	3.2e-65
WP_011260499.1|646790_647420_+	flavin reductase family protein	NA	NA	NA	NA	NA
WP_011409580.1|647537_648575_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	44.1	7.2e-76
WP_012443942.1|648711_649509_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	52.9	7.5e-65
WP_011409579.1|649501_650218_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
WP_011260495.1|650538_651231_-	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA	NA
WP_011260494.1|651368_652163_+	adenosylmethionine decarboxylase	NA	NA	NA	NA	NA
WP_011409578.1|652322_652637_+	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
WP_011260492.1|652954_653608_-	2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinone monooxygenase	NA	NA	NA	NA	NA
WP_011260491.1|653793_654222_+	50S ribosomal protein L13	NA	NA	NA	NA	NA
WP_005990700.1|654225_654618_+	30S ribosomal protein S9	NA	NA	NA	NA	NA
WP_011260490.1|655166_655784_+	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_027703893.1|655864_656080_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
WP_003483093.1|656422_656893_+	bacterioferritin	NA	NA	NA	NA	NA
WP_041182575.1|656905_657871_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_099051263.1|657949_658929_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.9	1.6e-37
WP_011260487.1|659088_662289_-	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	NA	NA	NA	NA	NA
WP_011409574.1|662565_663042_+	DUF2244 domain-containing protein	NA	NA	NA	NA	NA
WP_041182577.1|663058_664012_+	cytochrome c oxidase subunit II	NA	NA	NA	NA	NA
WP_011260484.1|664050_665655_+	cytochrome c oxidase subunit I	NA	NA	NA	NA	NA
WP_011409573.1|665635_665809_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443948.1|665805_666402_+	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
WP_011260481.1|666440_667316_+	cytochrome c oxidase subunit 3	NA	NA	NA	NA	NA
WP_012443949.1|667408_667627_-	twin transmembrane helix small protein	NA	NA	NA	NA	NA
WP_012443950.1|667687_668407_+	SURF1 family protein	NA	NA	NA	NA	NA
WP_011260478.1|668434_669010_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260477.1|669020_670184_+	COX15/CtaA family protein	NA	NA	NA	NA	NA
WP_011409570.1|670186_671083_+	protoheme IX farnesyltransferase	NA	NA	NA	NA	NA
WP_011409569.1|671471_673052_-	thioredoxin family protein	NA	NA	NA	NA	NA
WP_033013369.1|673235_674282_-	bile acid:sodium symporter	NA	NA	NA	NA	NA
WP_059317500.1|674506_674773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443953.1|674772_674937_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407626.1|675007_676327_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_012443955.1|676476_677445_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	2.5e-99
WP_011257475.1|679507_680023_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_011257476.1|680425_682648_-	primosomal protein N'	NA	NA	NA	NA	NA
WP_011257477.1|683113_684139_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012443959.1|684122_684725_+	DUF3106 domain-containing protein	NA	NA	NA	NA	NA
684373:684389	attL	GCGTAGTGCTGCGTCAT	NA	NA	NA	NA
WP_011257479.1|685055_685901_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027703444.1|686419_687796_+	MATE family efflux transporter	NA	NA	NA	NA	NA
WP_027703443.1|687880_689782_+	signal peptide peptidase SppA	NA	A0A291AUM2	Sinorhizobium_phage	28.3	8.1e-09
WP_011257482.1|689967_690183_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407495.1|690289_691066_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_027703442.1|691227_691902_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407497.1|691898_692672_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257486.1|692895_693459_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
WP_011257487.1|693469_695962_-	DNA topoisomerase I	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	35.1	1.9e-114
WP_011257488.1|696144_697419_-	RDD family protein	NA	NA	NA	NA	NA
WP_027703441.1|697460_698183_-	pilin	NA	NA	NA	NA	NA
WP_011257490.1|698223_698697_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
WP_041182579.1|698739_699882_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
WP_011407499.1|699953_701090_-	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	57.1	1.7e-09
WP_027703439.1|701222_701735_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.0	2.6e-18
WP_011257494.1|702128_703052_+|tRNA	methionyl-tRNA formyltransferase	tRNA	NA	NA	NA	NA
WP_011407500.1|703051_704365_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
WP_011257496.1|704415_706137_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_011257497.1|706301_707579_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_011257498.1|707776_708601_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_012443968.1|708604_709660_+	UDP-N-acetylglucosamine 2-epimerase	NA	NA	NA	NA	NA
WP_012443970.1|709825_711331_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_048488816.1|711327_711837_-	PH domain-containing protein	NA	NA	NA	NA	NA
WP_011257502.1|711946_713080_-	GTP cyclohydrolase II RibA	NA	A0A2H4PQS2	Staphylococcus_phage	44.2	6.1e-28
WP_011407503.1|713322_713844_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_011407504.1|714043_714958_-	lauroyl acyltransferase	NA	NA	NA	NA	NA
WP_011257505.1|715058_715499_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
WP_011407505.1|715607_717482_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.5	1.8e-37
WP_011407506.1|717674_717995_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407507.1|718623_719811_-|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	50.3	1.0e-110
WP_011257520.1|720031_720238_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257521.1|720234_720507_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407508.1|720503_720749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257523.1|720892_721021_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_012443979.1|722684_723920_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
722454:722470	attR	ATGACGCAGCACTACGC	NA	NA	NA	NA
WP_011407513.1|723988_724378_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109181928.1|724700_725666_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
>prophage 8
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	739373	785035	5238555	transposase,tRNA	Helicobacter_phage(33.33%)	40	NA	NA
WP_115877346.1|739373_740693_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011260472.1|740944_742693_-	DNA primase	NA	A0A1S5RF71	Helicobacter_phage	34.5	4.2e-44
WP_012443989.1|742782_743745_-	YihY/virulence factor BrkB family protein	NA	NA	NA	NA	NA
WP_011409564.1|746038_746485_-	GatB/YqeY domain-containing protein	NA	A0A292GL36	Xanthomonas_phage	45.2	1.0e-23
WP_002808376.1|746792_747008_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
WP_011260469.1|747287_748352_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	57.1	8.6e-101
WP_011409563.1|748430_748787_+	dihydroneopterin aldolase	NA	NA	NA	NA	NA
WP_011260467.1|749014_751186_+	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_012443995.1|753519_754482_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_012443997.1|755477_756656_-	PQQ-dependent sugar dehydrogenase	NA	NA	NA	NA	NA
WP_011260461.1|756830_757265_+	membrane protein	NA	NA	NA	NA	NA
WP_011260459.1|757825_758107_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094187777.1|758152_758950_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_094187784.1|759162_759925_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_027704068.1|759984_761301_-	amino acid permease	NA	NA	NA	NA	NA
WP_011260456.1|761297_762074_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094187715.1|762355_763118_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011409552.1|763566_764529_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
WP_094187731.1|764748_765546_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011260454.1|765701_766799_-	dipeptide epimerase	NA	NA	NA	NA	NA
WP_012444005.1|766795_768208_-	SH3 domain-containing protein	NA	NA	NA	NA	NA
WP_011409549.1|768431_769238_+	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
WP_012444006.1|769330_770077_+	M15 family metallopeptidase	NA	NA	NA	NA	NA
WP_011260450.1|770383_770581_+	CPXCG motif-containing cysteine-rich protein	NA	NA	NA	NA	NA
WP_011260449.1|770791_771169_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011409547.1|771394_771736_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260447.1|771942_772383_+	EF-hand domain-containing protein	NA	NA	NA	NA	NA
WP_012444008.1|772420_773170_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_011409543.1|773307_773883_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042465763.1|774007_774625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099051264.1|774667_775465_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011260442.1|775473_776283_-	glycosyltransferase family 25 protein	NA	NA	NA	NA	NA
WP_012444011.1|776458_777262_+	uroporphyrinogen-III synthase	NA	NA	NA	NA	NA
WP_027703938.1|777365_778343_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_011260439.1|778339_779605_+	porphyrin biosynthesis protein	NA	NA	NA	NA	NA
WP_011409538.1|780030_780555_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027703939.1|780684_781980_-	acetyl-CoA C-acetyltransferase	NA	NA	NA	NA	NA
WP_027703940.1|782069_782954_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011260435.1|783156_783537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182581.1|784069_785035_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	805908	867505	5238555	transposase	Leptospira_phage(22.22%)	37	NA	NA
WP_082356999.1|805908_806943_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	33.1	9.4e-44
WP_012444032.1|807825_808752_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	34.7	3.9e-49
WP_011409516.1|808960_809290_+	DnaJ domain-containing protein	NA	NA	NA	NA	NA
WP_041182863.1|809684_810356_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
WP_011260409.1|810352_810844_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011260408.1|811078_812008_+	lipid kinase YegS	NA	NA	NA	NA	NA
WP_011409514.1|812605_814081_+	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.5	3.1e-40
WP_011409513.1|814115_814964_+	amino acid lyase	NA	NA	NA	NA	NA
WP_099051317.1|815012_816114_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	1.5e-42
WP_027704189.1|816324_816921_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444037.1|817268_818852_-	SDR family oxidoreductase	NA	M1NLX1	Moumouvirus	27.0	2.5e-35
WP_011409509.1|819242_819434_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182582.1|821950_824275_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_012444041.1|826183_827275_-	DUF1615 domain-containing protein	NA	NA	NA	NA	NA
WP_041182865.1|827650_828724_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_041182866.1|829315_830194_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011409500.1|830391_831267_+	DMT family transporter	NA	NA	NA	NA	NA
WP_012444044.1|831542_833315_-	cellulase family glycosylhydrolase	NA	NA	NA	NA	NA
WP_048488789.1|833723_835424_-	glycoside hydrolase family 6 protein	NA	NA	NA	NA	NA
WP_011260392.1|836590_837967_+	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA	NA
WP_027703842.1|838060_839056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027703841.1|839301_840213_+	magnesium transporter	NA	NA	NA	NA	NA
WP_012444053.1|840807_841092_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011409497.1|841422_841869_+	avidin/streptavidin family protein	NA	NA	NA	NA	NA
WP_012444055.1|842132_843101_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	6.6e-100
WP_115862274.1|843313_844633_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011260388.1|845049_846723_-	alpha,alpha-trehalase TreA	NA	NA	NA	NA	NA
WP_027704042.1|846976_847762_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_094187782.1|848809_849572_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011409494.1|849815_850820_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182280.1|850858_851788_-	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_011260383.1|852335_855206_-	insulinase family protein	NA	NA	NA	NA	NA
WP_012444064.1|855459_858084_+	PAS domain S-box protein	NA	G3MA91	Bacillus_virus	28.6	1.9e-08
WP_012444069.1|859318_860761_-	cellulase family glycosylhydrolase	NA	H2DE45	Erwinia_phage	32.3	7.4e-47
WP_012444070.1|860968_862456_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	56.9	1.6e-124
WP_011260378.1|863846_865496_+	M28 family peptidase	NA	NA	NA	NA	NA
WP_012444074.1|866269_867505_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
>prophage 10
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	950210	987860	5238555	transposase	Herpes_simplex_virus(33.33%)	22	NA	NA
WP_012444121.1|950210_951446_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_011260307.1|952177_954868_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011260306.1|955018_957916_+	DUF4982 domain-containing protein	NA	L0N6M2	Herpes_simplex_virus	25.2	8.8e-23
WP_011409433.1|960471_961638_+	DUF1624 domain-containing protein	NA	NA	NA	NA	NA
WP_011409432.1|961852_962620_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_027703724.1|962664_963942_+	sugar MFS transporter	NA	NA	NA	NA	NA
WP_012444129.1|963982_965050_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_011260300.1|965056_966085_+	SIS domain-containing protein	NA	NA	NA	NA	NA
WP_011409430.1|966087_967242_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
WP_012444131.1|967661_968267_-	poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA	NA	NA	NA	NA
WP_011260297.1|968263_969517_-	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA	NA
WP_011409429.1|969518_971417_-	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA	NA	NA	NA	NA
WP_012444133.1|971418_973461_-	poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaA	NA	NA	NA	NA	NA
WP_012444134.1|974085_974316_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115877393.1|974777_975743_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_115877347.1|975895_977215_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_113341418.1|977594_979052_+	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA	NA
WP_113341417.1|979080_979290_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407913.1|979403_980618_+|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
WP_094187771.1|982588_983351_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011260292.1|984184_985417_-	multifunctional CCA addition/repair protein	NA	K4IEX3	Salmonella_phage	41.7	2.0e-72
WP_099051265.1|987062_987860_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 12
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	1271176	1414331	5238555	transposase,tRNA	Ralstonia_phage(25.93%)	111	NA	NA
WP_165352031.1|1271176_1272208_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_094187715.1|1272416_1273180_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011409252.1|1275692_1276778_-	DUF3396 domain-containing protein	NA	E5E3X8	Burkholderia_phage	37.9	4.0e-61
WP_011409251.1|1276774_1277845_-	DUF3396 domain-containing protein	NA	E5E3X8	Burkholderia_phage	36.6	5.7e-60
WP_011260011.1|1277852_1278548_-	VRR-NUC domain-containing protein	NA	Q8W6S1	Burkholderia_virus	46.1	2.8e-36
WP_011260010.1|1278544_1278994_-	hypothetical protein	NA	A4JWV5	Burkholderia_virus	34.1	3.3e-09
WP_041182872.1|1279323_1282278_-	aminomethyl-transferring glycine dehydrogenase	NA	M4QFZ1	Prochlorococcus_phage	49.8	2.6e-256
WP_041182602.1|1282745_1282928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027703307.1|1283358_1284162_+	sulfotransferase	NA	M4QPS9	Synechococcus_phage	27.3	4.5e-25
WP_041182873.1|1284250_1285462_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_012444311.1|1285458_1287618_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	28.0	5.7e-35
WP_011260005.1|1288959_1289364_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444312.1|1289445_1291464_-	M2 family metallopeptidase	NA	NA	NA	NA	NA
WP_041182603.1|1291575_1293246_-	phosphoethanolamine transferase	NA	NA	NA	NA	NA
WP_011409241.1|1293242_1294007_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_027703306.1|1294106_1295840_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_011409239.1|1296058_1296775_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	33.9	1.4e-22
WP_027703305.1|1296767_1298060_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_027703304.1|1298211_1298703_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003484370.1|1298771_1299029_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
WP_012444318.1|1299031_1299841_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
WP_027703303.1|1299876_1300617_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
WP_011259995.1|1300621_1301218_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011259994.1|1301462_1302659_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010371538.1|1302658_1303300_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_011259992.1|1303650_1304832_+	polyketide cyclase	NA	NA	NA	NA	NA
WP_027703302.1|1304913_1305300_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
WP_011259990.1|1305302_1305977_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_011259989.1|1306040_1306838_-	D-alanyl-D-alanine carboxypeptidase family protein	NA	NA	NA	NA	NA
WP_011259988.1|1306968_1307148_-	Arc family DNA-binding protein	NA	NA	NA	NA	NA
WP_011259987.1|1307144_1307429_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012444323.1|1308045_1309248_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
WP_012444325.1|1310061_1310208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703300.1|1310265_1310997_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012444327.1|1311196_1312075_+	M15 family metallopeptidase	NA	A0A0A0RV08	Bacillus_phage	42.7	2.5e-05
WP_012444328.1|1312184_1312445_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_012444329.1|1312504_1313986_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703298.1|1314001_1317739_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_011259979.1|1317735_1318719_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_012444331.1|1318715_1319522_+	OmpA family protein	NA	NA	NA	NA	NA
WP_011409224.1|1319574_1320648_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_115877349.1|1321597_1324573_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.8	4.5e-54
WP_041182604.1|1324559_1327625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444334.1|1327677_1328637_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA	NA
WP_082357001.1|1328704_1329280_+	DNA repair protein	NA	NA	NA	NA	NA
WP_012444336.1|1329332_1330295_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	NA	NA	NA	NA
WP_115877395.1|1330389_1330929_+	DNA repair protein	NA	NA	NA	NA	NA
WP_041182545.1|1331142_1332099_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
WP_011407587.1|1334687_1335722_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
WP_011409215.1|1336511_1337474_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	NA	A0A7H6	Microcystis_virus	30.5	1.2e-16
WP_012444343.1|1340412_1341228_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_161629184.1|1341341_1341935_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407237.1|1341987_1342944_+|transposase	IS30-like element IS1112a family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
WP_115877350.1|1343493_1344813_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011258802.1|1345025_1345994_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_011258251.1|1346078_1346312_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_012444346.1|1346308_1346461_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109182069.1|1346544_1347864_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011258802.1|1348063_1349032_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_125168746.1|1349083_1349575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182607.1|1349571_1354062_-	type IV secretion protein Rhs	NA	NA	NA	NA	NA
WP_115877351.1|1354208_1355528_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011258803.1|1355727_1356696_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.5e-99
WP_027703641.1|1356833_1357403_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
WP_012444351.1|1357399_1359808_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
WP_011407999.1|1360139_1360601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012444353.1|1360847_1361738_-	pirin family protein	NA	NA	NA	NA	NA
WP_129215637.1|1361915_1362428_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012444354.1|1362499_1363213_-	deoxyribonuclease V	NA	NA	NA	NA	NA
WP_012444355.1|1363316_1364066_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
WP_103057495.1|1364414_1364669_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444359.1|1365012_1367070_+	M13 family peptidase	NA	E3T4I7	Cafeteria_roenbergensis_virus	31.4	3.6e-79
WP_044757485.1|1369017_1370139_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_012444362.1|1370153_1370960_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA	NA
WP_041182609.1|1370964_1372248_-	EAL domain-containing response regulator	NA	NA	NA	NA	NA
WP_011258265.1|1372274_1372790_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_011258266.1|1372800_1374969_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	53.6	2.9e-10
WP_082357002.1|1375037_1376150_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_011258188.1|1376569_1377538_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_011258268.1|1378237_1378567_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_128415371.1|1378606_1378825_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444366.1|1379056_1382521_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
WP_011258270.1|1382923_1383466_-	N-acetyltransferase	NA	NA	NA	NA	NA
WP_011408011.1|1383877_1384786_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
WP_113328182.1|1385230_1385941_+	histidine kinase	NA	NA	NA	NA	NA
WP_167701252.1|1386095_1387127_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_115877352.1|1387248_1388568_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_012444370.1|1388638_1389451_-	C1 family peptidase	NA	NA	NA	NA	NA
WP_011408014.1|1390185_1390569_+	inner membrane CreD family protein	NA	NA	NA	NA	NA
WP_041182611.1|1390682_1391687_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.1	6.4e-98
WP_027704263.1|1392061_1393285_+	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	34.7	2.4e-54
WP_011257570.1|1393532_1394768_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_082356938.1|1394748_1395507_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103057417.1|1395463_1396918_+|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	41.0	9.0e-93
WP_167701253.1|1396897_1397926_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	41.7	8.1e-64
WP_011258280.1|1398013_1398826_-	C1 family peptidase	NA	NA	NA	NA	NA
WP_011408018.1|1399341_1399725_+	inner membrane CreD family protein	NA	NA	NA	NA	NA
WP_099051270.1|1399847_1400852_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	4.9e-98
WP_041182612.1|1401042_1401657_-	C1 family peptidase	NA	NA	NA	NA	NA
WP_011258802.1|1401767_1402736_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_011408021.1|1403246_1403834_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
WP_012444381.1|1403951_1404836_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
WP_011258289.1|1406021_1407425_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_011408024.1|1407438_1407945_+	transcriptional repressor	NA	NA	NA	NA	NA
WP_041182614.1|1408350_1408809_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_011258291.1|1409586_1409790_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011258293.1|1411209_1411695_-	DUF456 domain-containing protein	NA	NA	NA	NA	NA
WP_011258294.1|1411922_1412138_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	59.7	6.5e-16
WP_011408030.1|1412388_1412868_-	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
WP_027704135.1|1412999_1413428_-	cytochrome c	NA	NA	NA	NA	NA
WP_011258297.1|1413500_1414331_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
>prophage 13
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	1420680	1486684	5238555	transposase	Bacillus_virus(11.76%)	44	NA	NA
WP_011258305.1|1420680_1422621_+	asparagine synthase (glutamine-hydrolyzing)	NA	A0A1B1ISV2	uncultured_Mediterranean_phage	30.5	4.4e-26
WP_011258306.1|1422837_1423392_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	35.3	1.1e-19
WP_011408037.1|1423613_1425044_+	replicative DNA helicase	NA	O80281	Escherichia_phage	53.4	8.5e-120
WP_012444398.1|1425146_1426565_+	deoxyribodipyrimidine photo-lyase	NA	A0A1V0S949	Catovirus	31.7	3.3e-47
WP_012444400.1|1426981_1427707_+	OmpA family protein	NA	G3M9Z0	Bacillus_virus	33.9	1.4e-09
WP_011258310.1|1427805_1428216_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_041182615.1|1428267_1429224_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.7	2.6e-40
WP_012444404.1|1429467_1431849_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011258314.1|1434477_1434888_+	MerC domain-containing protein	NA	NA	NA	NA	NA
WP_011408042.1|1435187_1435370_+	30S ribosomal protein THX	NA	NA	NA	NA	NA
WP_011258316.1|1435502_1436543_-	zinc-dependent alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011258317.1|1436615_1438061_-	chloride channel protein	NA	A0A1X9I5Z9	Streptococcus_phage	31.5	4.9e-14
WP_027704131.1|1438187_1439486_-	alkaline phosphatase family protein	NA	NA	NA	NA	NA
WP_012444410.1|1439742_1440288_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A1S5V092	Saudi_moumouvirus	51.9	4.1e-14
WP_012444411.1|1440284_1441748_-	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA	NA
WP_011258323.1|1443210_1443465_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027704130.1|1443867_1444401_+	DUF4019 domain-containing protein	NA	NA	NA	NA	NA
WP_011258325.1|1444426_1444828_+	MAPEG family protein	NA	NA	NA	NA	NA
WP_011408050.1|1444796_1445177_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011258326.1|1445173_1445416_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
WP_011258327.1|1445444_1446104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011258329.1|1446779_1448684_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	35.7	2.5e-58
WP_012444418.1|1448947_1451344_+	EAL domain-containing protein	NA	G3MA91	Bacillus_virus	30.2	3.8e-11
WP_011258331.1|1451493_1452216_+	pseudouridine synthase	NA	NA	NA	NA	NA
WP_011258334.1|1455135_1455636_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA	NA
WP_075242605.1|1455577_1457254_+	serine hydrolase	NA	NA	NA	NA	NA
WP_011258336.1|1457400_1458666_+	cation:proton antiporter	NA	NA	NA	NA	NA
WP_011258337.1|1458724_1459918_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	25.3	4.0e-22
WP_012444424.1|1459914_1460604_-	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	28.3	3.6e-07
WP_033013597.1|1460709_1462179_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_011258340.1|1462198_1463035_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
WP_011258341.1|1463060_1464164_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_012444428.1|1464160_1467217_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_011258343.1|1467282_1467873_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
WP_011258344.1|1468004_1469837_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.3	1.2e-30
WP_011407587.1|1470522_1471557_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
WP_011257570.1|1472894_1474130_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_115877353.1|1475771_1480253_+	RHS repeat protein	NA	NA	NA	NA	NA
WP_011408064.1|1480258_1480627_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011258802.1|1480796_1481765_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_041182619.1|1482456_1483413_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.6	1.1e-41
WP_158645227.1|1483396_1483699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115877354.1|1484259_1485579_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011258529.1|1485715_1486684_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
>prophage 14
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	1537365	1580321	5238555	transposase,tRNA	Ralstonia_phage(60.0%)	26	NA	NA
WP_011258399.1|1537365_1540197_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SGW1	Hokovirus	22.2	4.1e-41
WP_011408096.1|1540511_1541012_+	signal peptidase II	NA	NA	NA	NA	NA
WP_011258401.1|1541100_1542051_+	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	NA	NA	NA	NA	NA
WP_011258402.1|1542564_1543500_+	ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
WP_011408097.1|1543499_1545500_+	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_033013172.1|1545502_1546129_+	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
WP_010365831.1|1546128_1546464_+	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
WP_012444469.1|1546630_1548511_+	M61 family metallopeptidase	NA	NA	NA	NA	NA
WP_012444470.1|1548735_1550982_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	31.3	4.4e-54
WP_012444471.1|1551005_1552625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444473.1|1552768_1557508_+	type IV secretion protein Rhs	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	45.0	1.0e-20
WP_033013550.1|1557509_1557899_+	hypothetical protein	NA	NA	NA	NA	NA
WP_113341597.1|1559283_1559637_+	RHS domain-containing protein	NA	NA	NA	NA	NA
WP_082356941.1|1560304_1560457_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182622.1|1560460_1561036_+	SUKH-4 family immunity protein	NA	NA	NA	NA	NA
WP_080256640.1|1561119_1561362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_157724567.1|1562615_1562888_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_012444055.1|1567962_1568931_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	6.6e-100
WP_113000360.1|1569071_1569368_+	hypothetical protein	NA	NA	NA	NA	NA
WP_125168749.1|1569357_1569957_+	SUKH-4 family immunity protein	NA	NA	NA	NA	NA
WP_094187763.1|1572834_1573632_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011258529.1|1574966_1575935_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
WP_041182623.1|1575986_1576262_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182297.1|1576265_1577228_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
WP_041182624.1|1577775_1578513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115877355.1|1579001_1580321_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 15
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	1591207	1644179	5238555	transposase,plate	Ralstonia_phage(33.33%)	35	NA	NA
WP_011258529.1|1591207_1592176_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
WP_024711387.1|1592541_1593048_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_027703472.1|1593040_1594555_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_011259605.1|1594654_1595158_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_011259604.1|1595193_1596027_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259603.1|1596014_1596518_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_012444494.1|1596521_1598399_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_012444495.1|1598362_1599373_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_012444496.1|1599405_1602111_+	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	29.3	1.1e-80
WP_027703476.1|1602299_1602797_+	hypothetical protein	NA	NA	NA	NA	NA
WP_125168760.1|1602862_1603357_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408952.1|1603744_1604203_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444497.1|1604467_1606405_+	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	28.6	3.4e-39
WP_011408951.1|1606413_1606953_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444498.1|1606949_1608362_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
WP_011408949.1|1608358_1609696_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_012444499.1|1609697_1611014_+	type VI secretion system protein TssL	NA	NA	NA	NA	NA
WP_012444500.1|1611017_1614476_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_041182626.1|1614472_1615120_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_011259593.1|1615116_1615839_+	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_012444503.1|1615835_1618739_+	protein kinase	NA	A0A2R8FF19	Brazilian_cedratvirus	25.0	2.5e-09
WP_012444504.1|1618735_1619062_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444505.1|1619234_1620263_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_041182627.1|1620271_1621252_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041182628.1|1621365_1623825_-	two-component system VirA-like sensor kinase	NA	NA	NA	NA	NA
WP_011259588.1|1623821_1624814_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_033013236.1|1624810_1625518_-	response regulator	NA	NA	NA	NA	NA
WP_012444509.1|1628550_1631631_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012444510.1|1632047_1633145_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012444511.1|1633530_1635618_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182545.1|1636492_1637449_+|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
WP_012444512.1|1638161_1638740_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041182629.1|1638863_1639976_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_012444514.1|1640032_1642621_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_012444515.1|1642703_1644179_+|transposase	IS5-like element ISXoo5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	66.8	5.4e-101
>prophage 16
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	1719772	1729977	5238555	tRNA	Pseudomonas_phage(28.57%)	9	NA	NA
WP_011408886.1|1719772_1721449_+	2-polyprenylphenol 6-hydroxylase	NA	E5EQ95	Micromonas_sp._RCC1109_virus	27.2	3.3e-38
WP_011408885.1|1721537_1722179_+	transcriptional repressor LexA	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
WP_011408884.1|1722351_1723386_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	60.7	6.2e-112
WP_012444556.1|1723688_1724177_+	recombination regulator RecX	NA	NA	NA	NA	NA
WP_011259507.1|1724278_1726927_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.6	3.7e-84
WP_003481884.1|1727066_1727279_+	carbon storage regulator CsrA	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
WP_103057523.1|1727881_1728409_+	helix-turn-helix domain-containing protein	NA	A0A1W6JTD5	Pseudomonas_phage	57.4	1.2e-34
WP_012444559.1|1728796_1729096_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444561.1|1729281_1729977_+	replicative DNA helicase	NA	E5DV83	Deep-sea_thermophilic_phage	41.0	5.6e-16
>prophage 17
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	1768837	1832578	5238555	transposase,tRNA	uncultured_Caudovirales_phage(46.15%)	40	NA	NA
WP_094187715.1|1768837_1769600_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011408860.1|1770010_1770727_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
WP_011259464.1|1770966_1772091_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	32.2	7.8e-44
WP_012444585.1|1772090_1772534_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259463.1|1772542_1775785_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_011408858.1|1775781_1776258_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
WP_011259461.1|1776274_1777195_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408857.1|1777191_1778931_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	27.8	1.3e-42
WP_115877358.1|1779477_1780797_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_161629172.1|1780920_1781406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408855.1|1781587_1781965_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259457.1|1782125_1782827_-|transposase	DDE transposase	transposase	A9YX10	Burkholderia_phage	32.9	1.9e-16
WP_027703619.1|1785635_1786583_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
WP_014503214.1|1786836_1787961_+	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.7	9.4e-05
WP_012444590.1|1788165_1789683_+|tRNA	lysine--tRNA ligase	tRNA	A0A2K9KZX5	Tupanvirus	39.7	5.5e-85
WP_011408849.1|1789824_1790961_+	two-component system response regulator	NA	NA	NA	NA	NA
WP_011259451.1|1791325_1793503_+	response regulator	NA	A0A1V0SGX0	Hokovirus	32.8	3.0e-47
WP_011408848.1|1793514_1794384_-	crotonase/enoyl-CoA hydratase family protein	NA	NA	NA	NA	NA
WP_012444593.1|1794560_1796243_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.4	3.2e-33
WP_011259446.1|1796892_1799661_-	aconitate hydratase AcnA	NA	NA	NA	NA	NA
WP_003486316.1|1799808_1800057_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
WP_011259444.1|1800053_1800464_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
WP_012444596.1|1800529_1803121_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
WP_011259442.1|1803474_1804290_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_011408846.1|1804945_1807189_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_011259440.1|1807297_1808374_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
WP_011259439.1|1808370_1808967_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
WP_011408845.1|1808963_1809830_-	chemotaxis protein CheR	NA	NA	NA	NA	NA
WP_012444601.1|1810083_1812477_-	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	58.3	7.8e-09
WP_012444602.1|1812561_1812885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_099051275.1|1813127_1813926_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011408841.1|1814774_1815257_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_011408840.1|1815392_1816178_-	flagellar brake protein	NA	NA	NA	NA	NA
WP_099051276.1|1816498_1817296_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011259432.1|1817999_1820261_-	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	54.5	1.3e-10
WP_011259431.1|1820654_1822916_-	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	40.9	9.3e-12
WP_012444606.1|1823508_1825584_-	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	40.9	1.3e-12
WP_041182888.1|1826271_1828383_-	CHASE3 domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.8	3.2e-14
WP_012444608.1|1829113_1831372_-	MCP four helix bundle domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.2	4.9e-13
WP_115840174.1|1831612_1832578_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
>prophage 18
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	1838875	1910011	5238555	transposase	Ralstonia_phage(33.33%)	46	NA	NA
WP_011408830.1|1838875_1839130_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_011259422.1|1839297_1841307_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_002806565.1|1841340_1841706_-	response regulator	NA	W8CYM9	Bacillus_phage	39.3	2.7e-14
WP_011259421.1|1841702_1842011_-	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_011259420.1|1842111_1843134_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_011259419.1|1843130_1843913_-	ParA family protein	NA	Q8JL10	Natrialba_phage	37.7	1.0e-13
WP_012444616.1|1844028_1844889_-	flagellar motor protein MotD	NA	NA	NA	NA	NA
WP_027703782.1|1844895_1845636_-	flagellar motor protein	NA	NA	NA	NA	NA
WP_027703781.1|1845724_1846078_-	hypothetical protein	NA	NA	NA	NA	NA
WP_075239855.1|1846074_1846590_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011259416.1|1846612_1847005_-	TonB-dependent receptor plug domain-containing protein	NA	NA	NA	NA	NA
WP_012444621.1|1847156_1847864_-	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	51.0	1.4e-51
WP_128415369.1|1847939_1848287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012444623.1|1848288_1850094_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_027703779.1|1850348_1850801_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182889.1|1851790_1854892_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_027703777.1|1855274_1855667_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115877359.1|1855733_1857053_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011408814.1|1857280_1857595_-	DUF1153 domain-containing protein	NA	NA	NA	NA	NA
WP_157724569.1|1857527_1858481_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_041182637.1|1858641_1859031_+	phage late control D family protein	NA	NA	NA	NA	NA
WP_041182637.1|1863876_1864266_+	phage late control D family protein	NA	NA	NA	NA	NA
WP_082356945.1|1864305_1866897_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_012444636.1|1868462_1871225_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.6	3.3e-43
WP_012444637.1|1871233_1872163_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_012444638.1|1872159_1874997_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182640.1|1875021_1875756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444640.1|1875773_1878116_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182891.1|1878147_1878879_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115877360.1|1878949_1880269_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011407587.1|1880565_1881600_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
WP_041182641.1|1881639_1882566_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.5	1.5e-93
WP_012444644.1|1882649_1884962_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011258802.1|1884972_1885941_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_012444645.1|1886670_1887948_-	carbohydrate porin	NA	NA	NA	NA	NA
WP_011259402.1|1888125_1889868_-	PTS fructose transporter subunit IIBC	NA	NA	NA	NA	NA
WP_011259401.1|1890026_1890983_-	1-phosphofructokinase family hexose kinase	NA	NA	NA	NA	NA
WP_041182642.1|1890979_1893496_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	28.5	6.3e-09
WP_011408798.1|1893656_1894652_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_094187736.1|1895286_1896050_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011257851.1|1896174_1897140_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_012444648.1|1898115_1901286_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_012444649.1|1901298_1902603_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_027703873.1|1902617_1903277_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012444652.1|1903554_1908579_+	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_012444654.1|1909027_1910011_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.5	2.0e-96
>prophage 19
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	1936693	1997762	5238555	protease,transposase,tRNA	Bacillus_virus(22.22%)	48	NA	NA
WP_115877361.1|1936693_1938013_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011408779.1|1938519_1939722_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_011408778.1|1939718_1941305_+	multidrug efflux MFS transporter	NA	NA	NA	NA	NA
WP_011408777.1|1941309_1942803_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_075240166.1|1942948_1944196_+	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.3	9.0e-25
WP_011259369.1|1944509_1945340_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_027703622.1|1945495_1945906_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012444676.1|1946160_1947525_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_011259367.1|1947676_1948678_-	magnesium and cobalt transport protein CorA	NA	NA	NA	NA	NA
WP_011259366.1|1948693_1949974_-	DUF4105 domain-containing protein	NA	NA	NA	NA	NA
WP_012444677.1|1949970_1950849_-	CBS domain-containing protein	NA	NA	NA	NA	NA
WP_011408769.1|1950943_1951462_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027703624.1|1951461_1951947_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
WP_011259362.1|1952001_1952664_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408767.1|1953075_1954062_-	PhoH family protein	NA	W8D063	Erwinia_phage	47.7	2.5e-46
WP_041182646.1|1954485_1955940_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
WP_012444681.1|1957875_1958862_+	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	56.0	1.3e-29
WP_011259356.1|1959391_1960036_+	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_011259355.1|1960035_1961295_+	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
WP_027703625.1|1961287_1962046_+	cytochrome c1	NA	NA	NA	NA	NA
WP_011259353.1|1962438_1963074_+	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011259352.1|1963152_1963593_+|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	46.2	9.3e-25
WP_011408764.1|1963625_1963952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_042465594.1|1964162_1964507_-	DUF3301 domain-containing protein	NA	NA	NA	NA	NA
WP_109181928.1|1969071_1970037_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_011408397.1|1970617_1971802_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
WP_027703931.1|1972562_1972763_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
WP_011408759.1|1973247_1973526_+	CopG family ribbon-helix-helix protein	NA	NA	NA	NA	NA
WP_041182647.1|1973513_1973804_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_015463309.1|1974405_1974585_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094187731.1|1975086_1975884_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011259345.1|1976300_1976702_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_011408756.1|1977794_1978886_-	ribonuclease D	NA	NA	NA	NA	NA
WP_041182165.1|1979157_1980993_+	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	33.1	5.6e-23
WP_094187754.1|1981309_1982056_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011259340.1|1982273_1983536_+	virulence factor	NA	NA	NA	NA	NA
WP_012444699.1|1983831_1985169_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	35.8	5.0e-37
WP_011408752.1|1985314_1986382_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_012444700.1|1986406_1987894_+	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
WP_012444701.1|1987890_1988391_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
WP_012444702.1|1988443_1990177_+	N-acetylmuramoyl-L-alanine amidase	NA	A6XML1	Bacillus_virus	28.4	4.1e-15
WP_011259334.1|1990314_1992192_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	35.2	1.4e-85
WP_027703274.1|1992191_1993145_+	DUF1684 domain-containing protein	NA	NA	NA	NA	NA
WP_011408749.1|1993178_1994150_+	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_027703272.1|1994323_1994899_-	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
WP_011408747.1|1995058_1995799_-	beta-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
WP_012444705.1|1995886_1996786_-|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
WP_012444706.1|1996883_1997762_+|protease	protease HtpX	protease	NA	NA	NA	NA
>prophage 20
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	2030174	2089611	5238555	transposase,tRNA	Streptococcus_phage(25.0%)	43	NA	NA
WP_094187777.1|2030174_2030973_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011257031.1|2031960_2032929_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	4.3e-99
WP_115877362.1|2033065_2034385_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_012444728.1|2034608_2035097_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
WP_011259294.1|2035468_2035732_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408729.1|2036603_2037443_-	M23 family metallopeptidase	NA	A0A075BS18	Microcystis_phage	41.2	2.4e-13
WP_011259290.1|2037442_2038792_-	dihydroorotase	NA	NA	NA	NA	NA
WP_033013281.1|2038788_2039076_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA	NA
WP_075239838.1|2039160_2040189_+	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
WP_011259288.1|2040331_2041393_+	S41 family peptidase	NA	NA	NA	NA	NA
WP_011259287.1|2041460_2042711_-	MFS transporter	NA	NA	NA	NA	NA
WP_012444735.1|2042707_2043145_-	SufE family protein	NA	NA	NA	NA	NA
WP_012444736.1|2043642_2045067_-|tRNA	cysteine--tRNA ligase	tRNA	M1PG92	Moumouvirus	34.5	1.1e-42
WP_027703614.1|2045243_2045738_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259283.1|2046050_2047076_+	N-acetylornithine carbamoyltransferase	NA	NA	NA	NA	NA
WP_011408723.1|2047147_2048389_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_011408722.1|2048630_2049083_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011259280.1|2049088_2050189_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
WP_011259279.1|2050228_2051572_+	acetylglutamate kinase	NA	NA	NA	NA	NA
WP_041182650.1|2052184_2053135_+	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
WP_011408717.1|2053258_2054554_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_011408716.1|2054553_2054919_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_011259275.1|2054918_2055179_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408715.1|2055192_2056347_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	37.8	1.2e-47
WP_011408714.1|2056525_2057770_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	45.1	2.5e-91
WP_011259272.1|2058137_2060051_+	CocE/NonD family hydrolase	NA	NA	NA	NA	NA
WP_012444741.1|2060031_2061297_-	MFS transporter	NA	NA	NA	NA	NA
WP_027703617.1|2061517_2061628_-	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
WP_011259267.1|2062006_2062270_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_033013282.1|2062318_2063419_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_075239845.1|2063570_2065307_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	26.2	8.2e-16
WP_011408708.1|2065303_2066989_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	25.2	3.6e-16
WP_012444745.1|2067157_2068456_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_115801893.1|2068462_2069428_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_011408705.1|2070220_2070397_+	hypothetical protein	NA	NA	NA	NA	NA
WP_153296779.1|2071131_2071530_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011259261.1|2071950_2072412_-	cytochrome c	NA	NA	NA	NA	NA
WP_011259260.1|2072420_2072813_-	c-type cytochrome	NA	NA	NA	NA	NA
WP_012444754.1|2077669_2080141_+	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.9	1.2e-47
WP_027703905.1|2080180_2080738_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
WP_128415342.1|2080946_2081426_+	hypothetical protein	NA	NA	NA	NA	NA
WP_148562584.1|2083534_2086933_-	avirulence protein	NA	NA	NA	NA	NA
WP_167701254.1|2088581_2089611_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 21
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	2095812	2138187	5238555	transposase,integrase,tRNA	uncultured_Mediterranean_phage(28.57%)	29	2098124:2098160	2137383:2137419
WP_012444766.1|2095812_2096856_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_094187715.1|2097135_2097899_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
2098124:2098160	attL	ATAGTTTAATCGCTCGAGACATTAATGTTAACAGGCC	NA	NA	NA	NA
WP_011259142.1|2098514_2099147_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
WP_011259140.1|2102031_2103153_+	phytase	NA	NA	NA	NA	NA
WP_011258529.1|2106844_2107813_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
WP_011259129.1|2109979_2110687_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408639.1|2110757_2111072_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259128.1|2111031_2112528_-	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_011259127.1|2112651_2113083_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_027703908.1|2113262_2114333_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_011259125.1|2114402_2115548_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	46.2	2.2e-86
WP_011259124.1|2115679_2116033_+	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
WP_012444775.1|2116229_2118074_+	protein translocase subunit SecD	NA	NA	NA	NA	NA
WP_011259122.1|2118168_2119137_+	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	30.3	1.4e-28
WP_027703909.1|2119217_2119526_-|integrase	phage integrase N-terminal SAM-like domain-containing protein	integrase	NA	NA	NA	NA
WP_115877363.1|2122198_2123587_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_082325607.1|2123836_2125021_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.4	1.0e-41
WP_044756859.1|2125071_2126133_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_115877355.1|2126369_2127689_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011259117.1|2127759_2128395_-	ribonuclease T	NA	NA	NA	NA	NA
WP_012444782.1|2128678_2129074_-	RcnB family protein	NA	NA	NA	NA	NA
WP_011408630.1|2129206_2129917_-	phosphate signaling complex protein PhoU	NA	NA	NA	NA	NA
WP_011259114.1|2130045_2130876_-	phosphate ABC transporter ATP-binding protein PstB	NA	W8CYL7	Bacillus_phage	32.6	5.5e-18
WP_011259113.1|2130898_2131768_-	phosphate ABC transporter permease PstA	NA	NA	NA	NA	NA
WP_012444784.1|2131767_2132742_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
WP_012444785.1|2132854_2133946_-	phosphate ABC transporter substrate-binding protein PstS	NA	E3SKK5	Synechococcus_phage	39.7	1.1e-47
WP_012444786.1|2134131_2135151_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4SNR3	Cyanophage	38.7	2.1e-48
WP_012444787.1|2135340_2136591_-	OprO/OprP family phosphate-selective porin	NA	NA	NA	NA	NA
WP_094187715.1|2137424_2138187_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
2137383:2137419	attR	GGCCTGTTAACATTAATGTCTCGAGCGATTAAACTAT	NA	NA	NA	NA
>prophage 22
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	2227169	2374726	5238555	protease,transposase	Xanthomonas_phage(23.53%)	109	NA	NA
WP_041182545.1|2227169_2228126_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
WP_041182656.1|2228738_2230115_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.7	7.1e-63
WP_011408569.1|2232667_2233846_+	N-acetylmuramoyl-L-alanine amidase	NA	M1IEI0	Bacillus_phage	39.6	1.9e-08
WP_011408568.1|2233883_2234804_+	GTP cyclohydrolase I FolE2	NA	NA	NA	NA	NA
WP_011259034.1|2235419_2236787_+	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	37.9	9.9e-25
WP_011259033.1|2236790_2237276_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
WP_011259032.1|2237311_2238127_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	34.1	2.1e-30
WP_011259031.1|2238123_2238966_+	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
WP_011259030.1|2239144_2239525_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
WP_012444846.1|2239521_2241036_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_012444847.1|2241194_2241536_+	type II toxin-antitoxin system prevent-host-death family antitoxin	NA	NA	NA	NA	NA
WP_012444848.1|2241539_2242163_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703351.1|2242397_2244353_-	DUF839 domain-containing protein	NA	NA	NA	NA	NA
WP_027703350.1|2244786_2247399_+	exo 1,3/1,4-beta-D-glucan glucohydrolase	NA	NA	NA	NA	NA
WP_075240030.1|2247391_2247649_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408561.1|2247658_2249221_+	sodium/sugar symporter	NA	A0A240F3J2	Aeromonas_phage	39.5	2.7e-87
WP_027703349.1|2249465_2251322_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_041182436.1|2252649_2254839_-	glycoside hydrolase family 3 C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_012444858.1|2254967_2256746_-	M14 family metallopeptidase	NA	NA	NA	NA	NA
WP_012444859.1|2257947_2258556_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_011259018.1|2258972_2259161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408556.1|2259344_2259659_+	N-acetyltransferase	NA	NA	NA	NA	NA
WP_011259016.1|2259709_2260543_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012444862.1|2260609_2261110_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_027703344.1|2261201_2261780_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011259013.1|2261941_2262442_-	RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_011259011.1|2263966_2264680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703343.1|2264931_2265171_+	HTH domain-containing protein	NA	NA	NA	NA	NA
WP_011259009.1|2267627_2268113_+	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	36.2	2.8e-14
WP_011408551.1|2268263_2269043_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_012444869.1|2269231_2271112_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	38.0	2.3e-24
WP_011259006.1|2271445_2272963_+	fumarate hydratase	NA	NA	NA	NA	NA
WP_011408550.1|2273281_2273734_+	glutathione S-transferase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011259000.1|2277425_2278400_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	39.6	2.0e-19
WP_027704049.1|2278566_2278800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027704112.1|2282615_2283134_+	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	40.7	6.8e-27
WP_115877364.1|2284867_2286187_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_128415445.1|2286237_2286744_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033013508.1|2287176_2288340_+	AAA family ATPase	NA	R4TQL5	Phaeocystis_globosa_virus	32.3	2.7e-15
WP_012444882.1|2288336_2290565_+	S8 family peptidase	NA	NA	NA	NA	NA
WP_041182659.1|2290646_2291861_-|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.2	6.9e-54
WP_012444885.1|2293645_2294665_-	DNA-binding protein	NA	NA	NA	NA	NA
WP_027703901.1|2294948_2296529_+	AAA family ATPase	NA	NA	NA	NA	NA
WP_027703900.1|2297739_2298087_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012444889.1|2298083_2298614_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	42.6	1.8e-27
WP_012444890.1|2298624_2299038_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	68.2	8.6e-41
WP_012444891.1|2299034_2299760_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	3.1e-86
WP_012444892.1|2299778_2301083_+	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	59.2	8.3e-130
WP_026144156.1|2301346_2301703_+	sulfurtransferase	NA	NA	NA	NA	NA
WP_012444894.1|2302698_2305659_+|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
WP_099051283.1|2306809_2307572_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012444897.1|2307688_2311084_-	PAS domain S-box protein	NA	A0A1V0SGX0	Hokovirus	27.8	2.9e-25
WP_011258994.1|2311298_2311679_-	response regulator	NA	NA	NA	NA	NA
WP_012444899.1|2311946_2312123_+	hypothetical protein	NA	NA	NA	NA	NA
WP_075239633.1|2312308_2312698_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703995.1|2312694_2312898_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094187736.1|2312940_2313703_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012444902.1|2315340_2316000_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
WP_012444903.1|2316055_2317972_-	phosphogluconate dehydratase	NA	NA	NA	NA	NA
WP_011258989.1|2318074_2318794_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
WP_011258988.1|2318790_2319798_-	glucokinase	NA	NA	NA	NA	NA
WP_011408534.1|2319794_2321225_-	glucose-6-phosphate dehydrogenase	NA	A0A222YYZ2	Synechococcus_phage	34.5	2.2e-67
WP_011258986.1|2321660_2322758_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	30.1	2.2e-22
WP_011408533.1|2322886_2323759_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
WP_005929790.1|2323798_2323969_+	DUF1674 domain-containing protein	NA	NA	NA	NA	NA
WP_011258985.1|2324028_2324424_+	succinate dehydrogenase, cytochrome b556 subunit	NA	NA	NA	NA	NA
WP_011258984.1|2324420_2324807_+	succinate dehydrogenase, hydrophobic membrane anchor protein	NA	NA	NA	NA	NA
WP_012444909.1|2324841_2326632_+	succinate dehydrogenase flavoprotein subunit	NA	NA	NA	NA	NA
WP_027703324.1|2326641_2326845_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408532.1|2326861_2327644_+	succinate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
WP_011408531.1|2327754_2328003_+	succinate dehydrogenase assembly factor 2	NA	NA	NA	NA	NA
WP_014503500.1|2327953_2328406_+	hypothetical protein	NA	NA	NA	NA	NA
WP_010378794.1|2328429_2329671_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_011258980.1|2329663_2330398_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	34.5	1.0e-31
WP_041182661.1|2331791_2332757_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011408527.1|2333010_2335419_+	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA	NA
WP_011408526.1|2335447_2336110_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
WP_011258975.1|2336113_2336578_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
WP_011258974.1|2336574_2338344_+	lipid A export permease/ATP-binding protein MsbA	NA	W8CYL7	Bacillus_phage	28.0	9.4e-52
WP_011258973.1|2338340_2339381_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
WP_011258972.1|2339672_2340452_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
WP_011258971.1|2340448_2340913_+	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
WP_012444920.1|2340936_2342355_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011258969.1|2342351_2344208_+	excinuclease ABC subunit UvrC	NA	NA	NA	NA	NA
WP_011258968.1|2344207_2344840_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_012444921.1|2345314_2345821_-	VOC family protein	NA	NA	NA	NA	NA
WP_115877396.1|2345987_2346974_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.1	4.0e-36
WP_011407609.1|2346937_2348122_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	45.4	1.0e-41
WP_011408520.1|2353936_2354608_-|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	38.9	5.2e-27
WP_012444927.1|2354604_2354781_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_041182662.1|2354999_2359022_-	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_011408491.1|2359245_2359545_-	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	91.3	1.9e-45
WP_012444931.1|2359548_2359743_-	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	79.0	1.3e-18
WP_041182663.1|2360011_2363308_-	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_075239627.1|2364689_2364788_+	SEC-C domain-containing protein	NA	NA	NA	NA	NA
WP_041182117.1|2365541_2365727_+	hypothetical protein	NA	A0A1W6DXV6	Xanthomonas_phage	93.4	8.6e-25
WP_012444935.1|2365726_2365930_+	hypothetical protein	NA	A0A1W6DXK4	Xanthomonas_phage	70.3	6.1e-16
WP_011258952.1|2366065_2367139_+	replication initiation factor domain-containing protein	NA	S0F3F7	Stenotrophomonas_phage	40.9	5.0e-64
WP_011408494.1|2367243_2367543_+	single-stranded DNA-binding protein	NA	S0F3B2	Stenotrophomonas_phage	54.2	3.4e-23
WP_011408495.1|2367906_2368146_+	hypothetical protein	NA	NA	NA	NA	NA
WP_103057497.1|2368252_2369737_+	hypothetical protein	NA	A0A1D6ZIU5	Xanthomonas_phage	40.2	1.4e-40
WP_041182119.1|2369738_2370059_+	DUF2523 domain-containing protein	NA	NA	NA	NA	NA
WP_011258954.1|2370055_2371240_+	hypothetical protein	NA	A0A1W6DXR3	Xanthomonas_phage	37.4	2.3e-54
WP_080493496.1|2371294_2371465_+	hypothetical protein	NA	A0A1D6ZIU7	Xanthomonas_phage	56.0	2.5e-10
WP_075240058.1|2371528_2371930_+	DUF4124 domain-containing protein	NA	A0A077JCA3	Xanthomonas_phage	64.3	3.9e-38
WP_075240059.1|2372573_2372834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408511.1|2373313_2373496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_125168751.1|2373617_2373929_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094187715.1|2373962_2374726_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 23
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	2502712	2539891	5238555	transposase	Bacillus_virus(33.33%)	31	NA	NA
WP_115877397.1|2502712_2503678_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011408430.1|2503698_2504502_-	amidohydrolase	NA	NA	NA	NA	NA
WP_011408429.1|2504641_2505790_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_011408428.1|2506016_2506661_+	heme ABC exporter ATP-binding protein CcmA	NA	G3M9Y6	Bacillus_virus	25.9	3.1e-13
WP_011258853.1|2506657_2507353_+	heme exporter protein CcmB	NA	NA	NA	NA	NA
WP_012445013.1|2507447_2508200_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_011258852.1|2508196_2508367_+	heme exporter protein CcmD	NA	NA	NA	NA	NA
WP_011258851.1|2508363_2508834_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA	NA
WP_011408426.1|2509002_2510940_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
WP_011258849.1|2510932_2511535_+	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_011258848.1|2511531_2511963_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_012445015.1|2511962_2512976_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_012445016.1|2513265_2515137_-	DUF4105 domain-containing protein	NA	NA	NA	NA	NA
WP_011408424.1|2515133_2515433_-	DUF2388 domain-containing protein	NA	NA	NA	NA	NA
WP_011408423.1|2515467_2516886_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_011258842.1|2517094_2518336_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	48.4	1.7e-103
WP_027703722.1|2518484_2519072_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_033013325.1|2519217_2520690_+	amino acid permease	NA	NA	NA	NA	NA
WP_012445020.1|2520766_2522197_+	amino acid permease	NA	NA	NA	NA	NA
WP_027703723.1|2522285_2522963_+	methylthioribulose 1-phosphate dehydratase	NA	NA	NA	NA	NA
WP_011408417.1|2522974_2523541_+	acireductone dioxygenase	NA	NA	NA	NA	NA
WP_012445022.1|2523543_2524242_+	acireductone synthase	NA	NA	NA	NA	NA
WP_012445023.1|2524567_2525653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445025.1|2526100_2526694_-	calcineurin-like phosphoesterase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011258834.1|2526710_2527274_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_115877398.1|2528296_2529616_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011258802.1|2529828_2530797_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_075239722.1|2531670_2532828_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_115877399.1|2533104_2534070_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_115877367.1|2535641_2536961_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_012445035.1|2538655_2539891_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
>prophage 24
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	2657338	2752803	5238555	transposase,tRNA	Xanthomonas_phage(20.0%)	60	NA	NA
WP_041182297.1|2657338_2658301_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
WP_113302692.1|2659501_2659885_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115877369.1|2660351_2661671_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_129215609.1|2661714_2662260_-	DUF3828 domain-containing protein	NA	NA	NA	NA	NA
WP_041182672.1|2666620_2666947_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_109181928.1|2666940_2667906_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_027704091.1|2667953_2668148_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082356957.1|2673942_2678913_-	IPT/TIG domain-containing protein	NA	NA	NA	NA	NA
WP_012445091.1|2679717_2681193_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	66.8	2.3e-99
WP_082356958.1|2682744_2686347_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_041182100.1|2686615_2686810_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	80.6	2.5e-19
WP_011408491.1|2686813_2687113_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	91.3	1.9e-45
WP_082356959.1|2687252_2689562_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_153296780.1|2689974_2690241_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011258825.1|2690931_2691945_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012445099.1|2692044_2692641_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011258802.1|2692692_2693661_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_115801888.1|2693873_2695193_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_094187728.1|2695632_2696430_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011258822.1|2696580_2697930_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.6	4.5e-94
WP_012445101.1|2698041_2698701_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_027704061.1|2699061_2699529_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_099051325.1|2699715_2700817_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.2	1.6e-36
WP_109182027.1|2702834_2703800_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_011258800.1|2707637_2708837_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_011258799.1|2708985_2709168_+	cold shock domain-containing protein	NA	NA	NA	NA	NA
WP_011408522.1|2711021_2712206_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
WP_115877397.1|2713269_2714235_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011408430.1|2714255_2715059_-	amidohydrolase	NA	NA	NA	NA	NA
WP_011408429.1|2715198_2716347_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
WP_011408428.1|2716573_2717218_+	heme ABC exporter ATP-binding protein CcmA	NA	G3M9Y6	Bacillus_virus	25.9	3.1e-13
WP_011258853.1|2717214_2717910_+	heme exporter protein CcmB	NA	NA	NA	NA	NA
WP_012445013.1|2718004_2718757_+	cytochrome c biogenesis protein CcsA	NA	NA	NA	NA	NA
WP_011258852.1|2718753_2718924_+	heme exporter protein CcmD	NA	NA	NA	NA	NA
WP_011258851.1|2718920_2719391_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA	NA
WP_011408426.1|2719559_2721497_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
WP_011258849.1|2721489_2722092_+	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
WP_011258848.1|2722088_2722520_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
WP_012445015.1|2722519_2723533_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
WP_012445016.1|2723822_2725694_-	DUF4105 domain-containing protein	NA	NA	NA	NA	NA
WP_011408424.1|2725690_2725990_-	DUF2388 domain-containing protein	NA	NA	NA	NA	NA
WP_011408423.1|2726024_2727443_-	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
WP_011258842.1|2727651_2728893_+	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	48.4	1.7e-103
WP_027703722.1|2729041_2729629_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_033013325.1|2729774_2731247_+	amino acid permease	NA	NA	NA	NA	NA
WP_012445020.1|2731323_2732754_+	amino acid permease	NA	NA	NA	NA	NA
WP_027703723.1|2732842_2733520_+	methylthioribulose 1-phosphate dehydratase	NA	NA	NA	NA	NA
WP_011408417.1|2733531_2734098_+	acireductone dioxygenase	NA	NA	NA	NA	NA
WP_012445022.1|2734100_2734799_+	acireductone synthase	NA	NA	NA	NA	NA
WP_012445023.1|2735124_2736210_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445025.1|2736657_2737251_-	calcineurin-like phosphoesterase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011258834.1|2737267_2737831_-	metallophosphoesterase	NA	NA	NA	NA	NA
WP_115877398.1|2738853_2740173_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011258802.1|2740385_2741354_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_075239722.1|2742227_2743385_+	molybdopterin-synthase adenylyltransferase MoeB	NA	NA	NA	NA	NA
WP_115877399.1|2743661_2744627_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_115877367.1|2746198_2747518_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_012445035.1|2749212_2750448_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_157724571.1|2750911_2751208_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_167701255.1|2751831_2752803_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 25
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	2867895	2985109	5238555	transposase,tRNA	Xanthomonas_phage(10.0%)	72	NA	NA
WP_041182297.1|2867895_2868858_-|transposase	IS1595-like element ISXo2 family transposase	transposase	NA	NA	NA	NA
WP_113302692.1|2870058_2870442_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115877369.1|2870908_2872228_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_129215609.1|2872271_2872817_-	DUF3828 domain-containing protein	NA	NA	NA	NA	NA
WP_041182672.1|2877177_2877504_-	sel1 repeat family protein	NA	NA	NA	NA	NA
WP_109181928.1|2877497_2878463_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_027704091.1|2878510_2878705_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082356957.1|2884499_2889470_-	IPT/TIG domain-containing protein	NA	NA	NA	NA	NA
WP_012445091.1|2890274_2891750_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	66.8	2.3e-99
WP_082356958.1|2893301_2896904_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_041182100.1|2897172_2897367_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	80.6	2.5e-19
WP_011408491.1|2897370_2897670_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	91.3	1.9e-45
WP_041182674.1|2897893_2901649_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_153296780.1|2902061_2902328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011258825.1|2903018_2904032_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012445099.1|2904131_2904728_+	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011258802.1|2904779_2905748_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_115801888.1|2905960_2907280_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_094187728.1|2907719_2908517_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011258822.1|2908667_2910017_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.6	4.5e-94
WP_012445101.1|2910128_2910788_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_027704061.1|2911148_2911616_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_099051325.1|2911802_2912904_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.2	1.6e-36
WP_109182027.1|2914921_2915887_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_011258800.1|2919724_2920924_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
WP_011258799.1|2921072_2921255_+	cold shock domain-containing protein	NA	NA	NA	NA	NA
WP_011408522.1|2923108_2924293_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	44.8	5.0e-41
WP_109182067.1|2925356_2926322_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_094187737.1|2926322_2927076_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011407913.1|2927780_2928995_+|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
WP_012445118.1|2929266_2930235_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.5e-99
WP_011257854.1|2930419_2931655_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_012445119.1|2931707_2932475_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_012445121.1|2933702_2936231_-	ribonuclease R	NA	Q0GXV6	Lactococcus_phage	34.0	3.1e-64
WP_041182915.1|2936797_2938243_-	acetylhydrolase	NA	M1HKG7	Acanthocystis_turfacea_Chlorella_virus	25.8	1.8e-08
WP_011258788.1|2938614_2938755_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
WP_027703703.1|2938754_2939936_-	acyl-CoA dehydrogenase family protein	NA	NA	NA	NA	NA
WP_011258786.1|2940024_2941020_+	metalloregulator ArsR/SmtB family transcription factor	NA	A0A2H4J145	uncultured_Caudovirales_phage	46.9	3.7e-05
WP_011258785.1|2941016_2942156_+	homocysteine S-methyltransferase family protein	NA	A0A140XBC7	Dickeya_phage	66.7	2.2e-17
WP_012445124.1|2942298_2945052_+	methionine synthase	NA	NA	NA	NA	NA
WP_011258783.1|2945438_2946644_-	AGE family epimerase/isomerase	NA	NA	NA	NA	NA
WP_012445125.1|2946640_2947627_-	carbohydrate kinase	NA	NA	NA	NA	NA
WP_011258781.1|2947623_2948934_-	L-fucose:H+ symporter permease	NA	NA	NA	NA	NA
WP_041182916.1|2948947_2950123_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_027703705.1|2950263_2951109_-	transporter	NA	NA	NA	NA	NA
WP_011258778.1|2951442_2952195_-	DUF2058 family protein	NA	NA	NA	NA	NA
WP_011258777.1|2952195_2952432_-	protein SlyX	NA	NA	NA	NA	NA
WP_011258776.1|2952424_2953774_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	40.6	1.4e-79
WP_027703707.1|2953799_2954765_-	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_011408372.1|2954856_2955414_-	glutathione peroxidase	NA	NA	NA	NA	NA
WP_042464800.1|2955549_2955798_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014502778.1|2955800_2956163_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012445132.1|2956159_2957035_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.9	3.3e-13
WP_012445133.1|2957031_2958018_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445134.1|2958027_2958858_+	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_027703710.1|2959490_2959913_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408367.1|2960035_2961439_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_094187736.1|2962890_2963654_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011258759.1|2966676_2968044_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	48.6	3.3e-113
WP_011258758.1|2968290_2968791_+	DUF3060 domain-containing protein	NA	NA	NA	NA	NA
WP_027703747.1|2969070_2969334_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
WP_012445147.1|2969671_2971168_+	cupin domain-containing protein	NA	NA	NA	NA	NA
WP_011258755.1|2971164_2972097_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_012445148.1|2972277_2975106_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
WP_011258753.1|2975148_2976351_+	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
WP_011258752.1|2976592_2978029_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.1	1.3e-38
WP_011258751.1|2978234_2978828_+	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	27.5	3.5e-11
WP_027703751.1|2979086_2979689_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	41.2	4.8e-16
WP_011408359.1|2979685_2981455_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	30.7	8.0e-59
WP_011258748.1|2981793_2982399_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011408358.1|2982528_2983455_+	TolC family protein	NA	NA	NA	NA	NA
WP_115877370.1|2983789_2985109_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 26
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	3009598	3077223	5238555	protease,coat,transposase	Bacillus_virus(28.57%)	53	NA	NA
WP_099051283.1|3009598_3010361_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_027703878.1|3010358_3011093_-	serine hydrolase	NA	NA	NA	NA	NA
WP_011258722.1|3011143_3012724_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
WP_027703877.1|3012730_3013924_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_012445166.1|3013934_3015452_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
WP_012445167.1|3015448_3015889_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011258718.1|3016010_3016862_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011408339.1|3016922_3019166_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	34.8	5.0e-82
WP_033013399.1|3019621_3020158_-	bacterioferritin	NA	NA	NA	NA	NA
WP_012445169.1|3020253_3022671_+	penicillin acylase family protein	NA	NA	NA	NA	NA
WP_011258714.1|3024050_3026177_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
WP_027703366.1|3026607_3027660_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA	NA
WP_011258712.1|3027728_3029423_-	asparagine synthase B	NA	E5ERH5	Ostreococcus_lucimarinus_virus	38.6	2.5e-86
WP_012445172.1|3029717_3030848_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
WP_011408335.1|3030852_3031353_-	GNAT family N-acetyltransferase	NA	A0A1X9I687	Streptococcus_phage	41.7	2.3e-27
WP_011408334.1|3031349_3031706_-	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA	NA
WP_012445174.1|3032168_3033365_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
WP_041182680.1|3033381_3035991_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
WP_012445176.1|3035987_3036764_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
WP_011408331.1|3037083_3037608_+|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_011408330.1|3037616_3038387_+	molecular chaperone	NA	NA	NA	NA	NA
WP_012445179.1|3038403_3040755_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_011258703.1|3040751_3041786_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_024710302.1|3041832_3042165_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445181.1|3042167_3042893_+	molecular chaperone	NA	NA	NA	NA	NA
WP_011258701.1|3043284_3044088_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
WP_011258700.1|3044257_3045136_+	elongation factor Ts	NA	NA	NA	NA	NA
WP_011408325.1|3045263_3045641_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_011258698.1|3045697_3046420_+	UMP kinase	NA	NA	NA	NA	NA
WP_011258697.1|3046600_3047158_+	ribosome recycling factor	NA	NA	NA	NA	NA
WP_027703358.1|3047175_3047937_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	32.6	3.6e-16
WP_014503921.1|3047933_3048761_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
WP_012445186.1|3048763_3049954_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
WP_012445187.1|3049980_3051327_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
WP_012445188.1|3051410_3053777_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
WP_094187763.1|3053899_3054697_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011258691.1|3055028_3056042_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
WP_011258690.1|3056038_3056500_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
WP_011258689.1|3056523_3057315_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
WP_027703356.1|3057353_3058610_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
WP_041182085.1|3058606_3059347_+	ribonuclease HII	NA	G9E3X7	Emiliania_huxleyi_virus	38.0	1.2e-24
WP_011258686.1|3059804_3063395_+	DNA polymerase III subunit alpha	NA	A0A291AVA6	Streptomyces_phage	36.6	2.0e-181
WP_011258685.1|3063570_3064530_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
WP_027703353.1|3065369_3067550_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_012445193.1|3067549_3068287_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	27.6	4.5e-08
WP_011258681.1|3068283_3069696_+	DUF3526 domain-containing protein	NA	NA	NA	NA	NA
WP_011408319.1|3069686_3070976_+	DUF3526 domain-containing protein	NA	NA	NA	NA	NA
WP_012445196.1|3071797_3072064_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408317.1|3072141_3072588_-	CopD family protein	NA	NA	NA	NA	NA
WP_011408316.1|3072661_3073264_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_033013197.1|3073440_3074748_+	polyhydroxyalkanoate depolymerase	NA	NA	NA	NA	NA
WP_012445198.1|3075220_3075784_+	hypothetical protein	NA	NA	NA	NA	NA
WP_109181928.1|3076257_3077223_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
>prophage 27
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	3082837	3140375	5238555	protease,transposase,tRNA	Acidithiobacillus_phage(10.0%)	48	NA	NA
WP_041182681.1|3082837_3084214_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	4.7e-75
WP_041182682.1|3084333_3085548_-|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.7	1.4e-54
WP_011258670.1|3087197_3087872_+	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	24.5	1.9e-08
WP_011258669.1|3087876_3088653_+	queuosine precursor transporter	NA	R4TNY5	Halovirus	27.2	1.9e-09
WP_011258668.1|3089925_3091863_+	DUF885 family protein	NA	NA	NA	NA	NA
WP_011258667.1|3092044_3093022_-	homocysteine S-methyltransferase	NA	NA	NA	NA	NA
WP_012445208.1|3093018_3094416_-	S-methylmethionine permease	NA	NA	NA	NA	NA
WP_012445209.1|3094693_3095746_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	41.7	3.4e-65
WP_012445211.1|3096509_3096959_+	DUF2147 domain-containing protein	NA	NA	NA	NA	NA
WP_011258663.1|3097183_3099268_+|tRNA	methionine--tRNA ligase	tRNA	NA	NA	NA	NA
WP_012445212.1|3099464_3100061_+	HAD family hydrolase	NA	NA	NA	NA	NA
WP_012445213.1|3100062_3100491_+	Rnf electron transport complex subunit RnfB	NA	NA	NA	NA	NA
WP_011258660.1|3101109_3101892_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445216.1|3101977_3102346_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011258659.1|3102404_3102968_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
WP_012445217.1|3102964_3103798_+	anti-sigma factor	NA	NA	NA	NA	NA
WP_011408297.1|3104023_3105022_+	acyl-CoA desaturase	NA	G4YAW5	Emiliania_huxleyi_virus	30.6	2.3e-18
WP_027704227.1|3105018_3106269_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011408295.1|3106268_3107153_+	DUF1365 domain-containing protein	NA	NA	NA	NA	NA
WP_011258655.1|3107149_3108445_+	class I SAM-dependent methyltransferase	NA	A0A2I2L5L3	Orpheovirus	32.4	3.9e-39
WP_011258654.1|3108441_3108987_+	DUF2878 domain-containing protein	NA	NA	NA	NA	NA
WP_011258653.1|3108983_3109766_+	DUF1295 domain-containing protein	NA	NA	NA	NA	NA
WP_012445221.1|3109783_3110854_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011408290.1|3111016_3111364_-	RidA family protein	NA	NA	NA	NA	NA
WP_012445224.1|3112344_3114909_+	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA	NA
WP_011258647.1|3115532_3116903_-	virulence factor family protein	NA	NA	NA	NA	NA
WP_011258646.1|3116972_3117167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011258645.1|3117226_3117835_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408284.1|3117870_3118473_-	RNA 2',3'-cyclic phosphodiesterase	NA	NA	NA	NA	NA
WP_011258643.1|3118746_3119202_-	PA2169 family four-helix-bundle protein	NA	NA	NA	NA	NA
WP_011258642.1|3119764_3120976_-	MFS transporter	NA	NA	NA	NA	NA
WP_011408282.1|3121196_3122315_+	alkene reductase	NA	NA	NA	NA	NA
WP_080256652.1|3123205_3123496_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011408280.1|3123784_3124120_-	alkylphosphonate utilization protein	NA	NA	NA	NA	NA
WP_027704229.1|3124234_3125284_+	cation transporter	NA	NA	NA	NA	NA
WP_012445230.1|3125531_3126767_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_012445231.1|3126942_3127416_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_012445232.1|3127555_3128932_+	Hsp70 family protein	NA	NA	NA	NA	NA
WP_011258635.1|3129121_3129307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094187731.1|3130286_3131085_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_115862279.1|3131201_3132521_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011259046.1|3132733_3133702_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.9e-99
WP_011258631.1|3133958_3134225_-	DksA/TraR family C4-type zinc finger protein	NA	A0A193GYU8	Escherichia_phage	54.5	1.5e-17
WP_011258630.1|3134399_3134654_+	DUF2789 domain-containing protein	NA	NA	NA	NA	NA
WP_011258629.1|3134814_3134988_-	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
WP_012445235.1|3135389_3135917_+	M48 family metallopeptidase	NA	NA	NA	NA	NA
WP_011258627.1|3136385_3137486_+	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
WP_011258626.1|3137546_3140375_-|protease	autotransporter serine protease	protease	A0A1V0SBG2	Catovirus	25.2	3.9e-07
>prophage 28
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	3262232	3345354	5238555	protease,transposase,tRNA	Bacillus_phage(20.0%)	56	NA	NA
WP_012445306.1|3262232_3263060_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_011407237.1|3263348_3264305_-|transposase	IS30-like element IS1112a family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
WP_108744354.1|3264414_3264585_-	hypothetical protein	NA	NA	NA	NA	NA
WP_059317522.1|3265287_3265671_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445310.1|3266576_3267821_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_012445311.1|3267817_3268096_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408200.1|3268173_3268575_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033013343.1|3268628_3268856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408199.1|3268857_3269229_-	biotin/lipoyl-binding protein	NA	NA	NA	NA	NA
WP_148562586.1|3269673_3269970_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011258527.1|3270212_3271676_+	glycoside hydrolase family 125 protein	NA	NA	NA	NA	NA
WP_011408197.1|3271811_3274154_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA	NA
WP_011408196.1|3274433_3276275_+	beta-galactosidase	NA	NA	NA	NA	NA
WP_027703763.1|3276324_3278856_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408193.1|3279473_3279674_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445314.1|3279731_3280052_-	RebB family R body protein	NA	NA	NA	NA	NA
WP_011258521.1|3280431_3281535_+	exo-alpha-sialidase	NA	NA	NA	NA	NA
WP_027703764.1|3281946_3283635_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703765.1|3283744_3284476_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_027703766.1|3284472_3285537_-	isoaspartyl peptidase/L-asparaginase	NA	NA	NA	NA	NA
WP_115862280.1|3290185_3291505_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_041182920.1|3291637_3292720_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_012445323.1|3292731_3293355_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011258512.1|3293605_3294082_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_011408184.1|3294115_3295318_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027703400.1|3295325_3302252_-	Hpt domain-containing protein	NA	W8CYM9	Bacillus_phage	31.1	2.9e-11
WP_011258510.1|3302365_3304402_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	42.1	2.1e-23
WP_003482487.1|3304441_3304972_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_011258508.1|3304971_3305334_-	response regulator	NA	A0A220YL79	Alteromonas_virus	26.8	9.0e-10
WP_005913706.1|3305351_3305753_-	twitching motility response regulator PilG	NA	NA	NA	NA	NA
WP_011408182.1|3306002_3306953_+	glutathione synthase	NA	NA	NA	NA	NA
WP_011258506.1|3306949_3307825_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_048488826.1|3308118_3309069_-	ADP-ribosylglycohydrolase family protein	NA	A0A1S6UB21	Serratia_phage	48.5	1.5e-64
WP_012445327.1|3309031_3309751_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_011258503.1|3309764_3311792_-	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	33.2	4.6e-95
WP_011408178.1|3311991_3312516_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445329.1|3312529_3314974_-	penicillin-binding protein 1B	NA	NA	NA	NA	NA
WP_011408177.1|3315215_3317318_+	glycosyltransferase	NA	NA	NA	NA	NA
WP_027703398.1|3317650_3319093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445331.1|3319424_3321611_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	NA	NA	NA	NA
WP_002812057.1|3321900_3321981_+	pyrroloquinoline quinone precursor peptide PqqA	NA	NA	NA	NA	NA
WP_027703397.1|3322064_3322964_+	pyrroloquinoline quinone biosynthesis protein PqqB	NA	NA	NA	NA	NA
WP_012445333.1|3322960_3323713_+	pyrroloquinoline-quinone synthase PqqC	NA	NA	NA	NA	NA
WP_012445334.1|3323709_3323988_+	pyrroloquinoline quinone biosynthesis peptide chaperone PqqD	NA	NA	NA	NA	NA
WP_012445335.1|3323984_3325103_+	pyrroloquinoline quinone biosynthesis protein PqqE	NA	NA	NA	NA	NA
WP_011408171.1|3325165_3325678_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703396.1|3326106_3327621_+	PhoPQ-regulated protein	NA	NA	NA	NA	NA
WP_027703395.1|3329062_3331717_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_012445342.1|3331937_3336059_-	ATP-dependent RNA helicase HrpA	NA	A0A1V0SDF7	Indivirus	28.5	5.6e-47
WP_011408166.1|3336160_3336706_+	DNA starvation/stationary phase protection protein	NA	A0A2H4N7L5	Lake_Baikal_phage	32.4	1.5e-16
WP_011258487.1|3337262_3339059_+	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.5	1.5e-81
WP_011408165.1|3339197_3339695_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703393.1|3339773_3340178_+	response regulator	NA	NA	NA	NA	NA
WP_008578058.1|3340808_3341483_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A088F6S9	Vibrio_phage	34.7	6.4e-25
WP_094187715.1|3343304_3344067_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011258442.1|3344118_3345354_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
>prophage 29
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	3359404	3421129	5238555	transposase,tRNA	Ralstonia_phage(33.33%)	39	NA	NA
WP_012445358.1|3359404_3361171_-|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
WP_012445359.1|3361328_3362105_+	DUF3011 domain-containing protein	NA	NA	NA	NA	NA
WP_012445361.1|3362602_3362896_-	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
WP_012445363.1|3363336_3364575_+	MFS transporter	NA	NA	NA	NA	NA
WP_011258422.1|3367158_3368715_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_011258418.1|3370105_3371497_+	DNA repair protein RadA	NA	NA	NA	NA	NA
WP_012445371.1|3374467_3377023_+	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.8	5.0e-30
WP_012445373.1|3377279_3380114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099051287.1|3380160_3380923_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_041182692.1|3380956_3381694_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445376.1|3381718_3384397_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	26.9	8.4e-28
WP_053077061.1|3384338_3385244_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_011407237.1|3387949_3388906_+|transposase	IS30-like element IS1112a family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
WP_148562587.1|3388942_3389188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027704271.1|3389196_3390213_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445380.1|3390280_3392116_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445381.1|3392129_3392729_-	NfuA family Fe-S biogenesis protein	NA	NA	NA	NA	NA
WP_012445382.1|3392816_3393173_+	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
WP_012445383.1|3393169_3393592_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_012445384.1|3393607_3393841_+	ZIP family metal transporter	NA	NA	NA	NA	NA
WP_103057594.1|3393891_3394128_+	zinc transporter ZupT	NA	NA	NA	NA	NA
WP_027704270.1|3394476_3396261_+	DUF3300 domain-containing protein	NA	NA	NA	NA	NA
WP_027704269.1|3396293_3397280_-	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_041182694.1|3397690_3401398_+	Rne/Rng family ribonuclease	NA	NA	NA	NA	NA
WP_094187765.1|3401923_3402687_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012445389.1|3402790_3403438_-	response regulator	NA	NA	NA	NA	NA
WP_011408973.1|3403659_3404421_-	sulfurtransferase	NA	NA	NA	NA	NA
WP_011408974.1|3404520_3404886_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011408975.1|3404944_3405376_+	FKBP-type peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_011259625.1|3405387_3406650_+	TIGR03862 family flavoprotein	NA	NA	NA	NA	NA
WP_011259626.1|3406633_3407926_-	nucleotide sugar dehydrogenase	NA	NA	NA	NA	NA
WP_011408977.1|3408295_3409066_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
WP_011407913.1|3409403_3410618_-|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
WP_094187715.1|3410764_3411528_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012445394.1|3411998_3413234_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_011408979.1|3414532_3414790_-	stress-induced protein	NA	NA	NA	NA	NA
WP_082356967.1|3415229_3416213_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	3.3e-99
WP_012445397.1|3416528_3417497_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.1e-99
WP_041182696.1|3420166_3421129_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 30
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	3489531	3593548	5238555	transposase,integrase,tRNA,capsid,portal,plate,head,holin,tail,terminase	Stenotrophomonas_phage(48.84%)	102	3527845:3527891	3570280:3570326
WP_094187763.1|3489531_3490330_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_099051289.1|3490472_3491499_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_024743012.1|3493012_3493549_+	lipocalin family protein	NA	A0A2I2L3Z7	Orpheovirus	33.8	4.0e-14
WP_041182468.1|3496339_3497422_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_012445462.1|3497539_3498520_-	TraB/GumN family protein	NA	NA	NA	NA	NA
WP_011259690.1|3498629_3499091_-	cupin domain-containing protein	NA	A0A291AU44	Pandoravirus	40.0	6.3e-16
WP_011259691.1|3499125_3499920_-	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_011259692.1|3499924_3500719_-	polysaccharide pyruvyl transferase family protein	NA	A0A1V0SAR6	Catovirus	36.0	6.0e-22
WP_011259693.1|3500755_3501952_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_011409038.1|3502016_3503510_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
WP_011259695.1|3503527_3504577_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_011259696.1|3504573_3505716_-	GDP-mannose:cellobiosyl-diphosphopolyprenol alpha-mannosyltransferase	NA	NA	NA	NA	NA
WP_094187837.1|3505783_3506860_-	acyltransferase family protein	NA	NA	NA	NA	NA
WP_011259698.1|3506876_3507968_-	acyltransferase family protein	NA	NA	NA	NA	NA
WP_049756340.1|3507964_3509254_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011409041.1|3509348_3510803_-	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA	NA
WP_027704192.1|3511046_3512486_-	GumC family protein	NA	NA	NA	NA	NA
WP_011259702.1|3512467_3513166_-	polysaccharide export protein	NA	NA	NA	NA	NA
WP_005995911.1|3513774_3514131_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_002811076.1|3514111_3514411_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	38.9	4.7e-12
WP_011259703.1|3514432_3516811_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_012445467.1|3516919_3517915_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	36.0	1.0e-31
WP_012445468.1|3518169_3518529_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
WP_002811096.1|3518539_3518737_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
WP_080098376.1|3518985_3519528_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	35.2	1.5e-13
WP_011409044.1|3519576_3521481_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	35.7	2.0e-124
WP_153296782.1|3523161_3523299_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012443979.1|3523548_3524784_+|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_011259712.1|3525093_3527115_-	excinuclease ABC subunit UvrB	NA	NA	NA	NA	NA
WP_011259713.1|3527253_3527796_+	GspH/FimT family pseudopilin	NA	NA	NA	NA	NA
3527845:3527891	attL	TTGGCGCCCGAAGTTGGACTCGAACCAACGACCCCCTGATTAACAGT	NA	NA	NA	NA
WP_041182701.1|3528870_3529602_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182926.1|3529738_3530722_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.2	1.7e-98
WP_012445479.1|3530795_3533630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445480.1|3533626_3534553_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_153296783.1|3535538_3535895_+	hypothetical protein	NA	NA	NA	NA	NA
WP_147213250.1|3536087_3536270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445481.1|3536305_3537685_+	SIR2 family protein	NA	NA	NA	NA	NA
WP_024712752.1|3537768_3537972_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182702.1|3537968_3538409_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445482.1|3538522_3539233_-	site-specific DNA-methyltransferase	NA	V9IQV5	Stenotrophomonas_phage	76.5	9.2e-107
WP_053503138.1|3539150_3539396_-	Com family DNA-binding transcriptional regulator	NA	V9IQK2	Stenotrophomonas_phage	51.2	4.1e-14
WP_041182703.1|3539421_3540444_-|portal	phage portal protein	portal	A0A2H4J922	uncultured_Caudovirales_phage	71.5	1.5e-139
WP_011408153.1|3540443_3542228_-|terminase	terminase ATPase subunit family protein	terminase	V9IQL5	Stenotrophomonas_phage	75.6	4.7e-269
WP_012445485.1|3542349_3543192_+|capsid	GPO family capsid scaffolding protein	capsid	A0A2H4J928	uncultured_Caudovirales_phage	52.9	1.5e-68
WP_011258476.1|3543238_3544255_+|capsid	phage major capsid protein, P2 family	capsid	Q9ZXM3	Pseudomonas_virus	70.5	5.5e-137
WP_011258475.1|3544258_3544978_+|terminase	terminase endonuclease subunit	terminase	Q9ZXM2	Pseudomonas_virus	63.4	2.0e-69
WP_012445486.1|3545077_3545545_+|head	head completion/stabilization protein	head	V9IQW6	Stenotrophomonas_phage	49.7	9.2e-31
WP_011258473.1|3545544_3545754_+|tail	tail protein X	tail	K4PAW7	Burkholderia_phage	58.0	3.5e-14
WP_011258472.1|3545758_3546115_+	membrane protein	NA	V9IQG9	Stenotrophomonas_phage	56.1	3.5e-22
WP_041182704.1|3546107_3546383_+|holin	phage holin family protein	holin	V9IQV8	Stenotrophomonas_phage	59.8	1.3e-21
WP_011408146.1|3546382_3547021_+	glycoside hydrolase family 19 protein	NA	V9IQK6	Stenotrophomonas_phage	60.9	7.8e-49
WP_012445489.1|3547020_3547509_+	hypothetical protein	NA	V9IQW8	Stenotrophomonas_phage	51.4	4.2e-26
WP_012445490.1|3547505_3547925_+|tail	phage tail protein	tail	A0A2H4J906	uncultured_Caudovirales_phage	63.7	3.7e-39
WP_012445491.1|3547912_3548359_+	phage virion morphogenesis protein	NA	V9IQH0	Stenotrophomonas_phage	56.1	4.1e-36
WP_012445492.1|3548850_3550020_+	DUF3800 domain-containing protein	NA	NA	NA	NA	NA
WP_012445493.1|3550150_3551041_+|plate	baseplate J/gp47 family protein	plate	V9IQV9	Stenotrophomonas_phage	52.7	2.0e-82
WP_041182705.1|3551033_3551579_+|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	54.0	1.2e-50
WP_012445495.1|3551588_3553094_+|tail	tail fiber protein	tail	V9IQX0	Stenotrophomonas_phage	48.6	1.3e-54
WP_041182706.1|3553101_3553680_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445497.1|3553740_3554304_+|plate	phage baseplate assembly protein V	plate	Q9ZXL0	Pseudomonas_virus	43.7	9.1e-25
WP_012445498.1|3554300_3554660_+	GPW/gp25 family protein	NA	V9IQW0	Stenotrophomonas_phage	66.1	1.9e-36
WP_012445499.1|3554671_3555838_+|tail	phage tail sheath protein	tail	E5FFG9	Burkholderia_phage	64.3	1.2e-135
WP_011258458.1|3555868_3556378_+|tail	phage major tail tube protein	tail	V9IQX1	Stenotrophomonas_phage	79.9	1.8e-72
WP_012445500.1|3556423_3556726_+|tail	phage tail assembly protein	tail	V9IQM4	Stenotrophomonas_phage	70.1	2.0e-26
WP_011258456.1|3556734_3556848_+|tail	GpE family phage tail protein	tail	A0A0M4R2P3	Salmonella_phage	68.6	4.2e-06
WP_012445501.1|3556880_3559751_+|tail	phage tail tape measure protein	tail	V9IQL1	Stenotrophomonas_phage	49.8	1.8e-206
WP_012445502.1|3559763_3560165_+|tail	phage tail protein	tail	V9IQX3	Stenotrophomonas_phage	62.9	1.0e-38
WP_012445503.1|3560161_3561148_+	phage late control D family protein	NA	E5E3U4	Burkholderia_phage	53.1	4.7e-93
WP_012445504.1|3561755_3562187_-	transcriptional regulator	NA	E5E3P4	Burkholderia_phage	36.4	1.5e-11
WP_041182707.1|3562259_3562520_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182927.1|3562522_3562840_+	hypothetical protein	NA	V9IQW3	Stenotrophomonas_phage	59.8	3.9e-25
WP_041182708.1|3562852_3563131_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182709.1|3563348_3566033_+	toprim domain-containing protein	NA	V9IQW5	Stenotrophomonas_phage	70.7	0.0e+00
WP_012445510.1|3566356_3566575_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445511.1|3566571_3566850_+	hypothetical protein	NA	NA	NA	NA	NA
WP_047339974.1|3566839_3567112_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182710.1|3567191_3567611_+	hypothetical protein	NA	V9IQL6	Stenotrophomonas_phage	47.4	4.0e-17
WP_041182711.1|3567603_3567786_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182712.1|3567778_3568051_+	hypothetical protein	NA	NA	NA	NA	NA
WP_008572787.1|3568047_3568272_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182713.1|3568268_3568541_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182715.1|3568961_3570203_+|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	53.9	4.8e-119
WP_042465105.1|3570409_3570859_-	type IV pilin protein	NA	NA	NA	NA	NA
3570280:3570326	attR	TTGGCGCCCGAAGTTGGACTCGAACCAACGACCCCCTGATTAACAGT	NA	NA	NA	NA
WP_011409047.1|3570871_3574855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011259718.1|3574811_3575321_-	pilus assembly protein	NA	NA	NA	NA	NA
WP_011259719.1|3575324_3576491_-	PilW family protein	NA	NA	NA	NA	NA
WP_011259720.1|3576487_3576961_-	type IV pilus modification protein PilV	NA	NA	NA	NA	NA
WP_027703389.1|3576957_3577473_-	GspH/FimT family pseudopilin	NA	A0A1W6JT76	Pseudomonas_phage	41.8	8.6e-06
WP_011259722.1|3577642_3579028_-	LOG family protein	NA	NA	NA	NA	NA
WP_041182716.1|3579134_3582329_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011409048.1|3583086_3583686_-	YhgN family NAAT transporter	NA	NA	NA	NA	NA
WP_011259725.1|3583682_3584426_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_011259726.1|3584422_3584743_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA	NA
WP_011259727.1|3584864_3585443_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	39.1	5.5e-33
WP_011259728.1|3585584_3586730_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_012445523.1|3586726_3587230_-	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	38.7	3.6e-17
WP_011259730.1|3587288_3587558_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259731.1|3587554_3588442_+	carboxylating nicotinate-nucleotide diphosphorylase	NA	NA	NA	NA	NA
WP_011409052.1|3588505_3589546_+	DUF2272 domain-containing protein	NA	NA	NA	NA	NA
WP_011259733.1|3589924_3592039_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
WP_003485583.1|3592204_3592465_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
WP_011259734.1|3592621_3593548_-|tRNA	tRNA pseudouridine(55) synthase TruB	tRNA	NA	NA	NA	NA
>prophage 31
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	3617721	3679026	5238555	protease,transposase,tRNA	Burkholderia_virus(12.5%)	50	NA	NA
WP_094187736.1|3617721_3618485_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011259756.1|3619508_3621875_-	EAL domain-containing protein	NA	NA	NA	NA	NA
WP_011409066.1|3621871_3622546_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011259758.1|3622755_3623694_-	isopenicillin N synthase family oxygenase	NA	NA	NA	NA	NA
WP_011259759.1|3623816_3625166_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
WP_011259760.1|3625162_3626050_-	acetyl-CoA carboxylase carboxyltransferase subunit beta	NA	NA	NA	NA	NA
WP_012445542.1|3626369_3627176_-	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
WP_012445544.1|3627621_3628839_-	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
WP_033013162.1|3628944_3629913_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	24.1	1.1e-09
WP_011259764.1|3630241_3630910_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
WP_011259765.1|3630906_3631680_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
WP_075247512.1|3632253_3634206_-	ferrous iron transporter B	NA	NA	NA	NA	NA
WP_011259769.1|3634886_3635912_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
WP_011409070.1|3635996_3637070_-	D-glycerate dehydrogenase	NA	M1HTA3	Paramecium_bursaria_Chlorella_virus	23.2	2.1e-14
WP_011259771.1|3637062_3638166_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	40.4	1.6e-73
WP_011259772.1|3638176_3639103_-	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
WP_011259773.1|3639183_3639834_+	SCO family protein	NA	NA	NA	NA	NA
WP_027703264.1|3639830_3640679_+	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
WP_041182211.1|3641229_3642813_-	transglycosylase SLT domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	31.5	4.2e-11
WP_041182719.1|3644985_3645942_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.8	3.7e-42
WP_153296738.1|3646471_3646759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011409076.1|3646869_3647376_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
WP_044756621.1|3647497_3648898_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
WP_012445553.1|3649160_3649736_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
WP_011409078.1|3649732_3650167_+	HIT family protein	NA	NA	NA	NA	NA
WP_011259782.1|3650194_3650362_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259783.1|3650950_3651136_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259784.1|3651170_3651740_-	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	70.1	2.6e-72
WP_011259785.1|3651832_3652684_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
WP_011259787.1|3654071_3656087_+	M13 family metallopeptidase	NA	NA	NA	NA	NA
WP_012445555.1|3656357_3657056_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_011409081.1|3657096_3657504_-	MGMT family protein	NA	NA	NA	NA	NA
WP_012445557.1|3657941_3658904_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011409084.1|3660196_3661447_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_027704196.1|3661454_3662699_-	DUF418 domain-containing protein	NA	NA	NA	NA	NA
WP_011259794.1|3662926_3663406_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_027704197.1|3663516_3664053_+	C40 family peptidase	NA	A0A1V0DZX6	Clostridioides_phage	40.5	3.2e-19
WP_011259796.1|3664162_3664912_+	C40 family peptidase	NA	A0A0K2SUC1	Clostridium_phage	38.5	1.2e-19
WP_011259797.1|3665119_3665611_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
WP_011409088.1|3666724_3668044_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_012445565.1|3668187_3669894_+	alkaline phosphatase	NA	NA	NA	NA	NA
WP_012445566.1|3669927_3671232_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
WP_011259802.1|3671263_3671524_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
WP_011409091.1|3671525_3672401_+	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
WP_027704198.1|3674235_3674700_-	DUF4870 domain-containing protein	NA	NA	NA	NA	NA
WP_012445570.1|3674751_3674940_-	DUF4870 domain-containing protein	NA	NA	NA	NA	NA
WP_069959944.1|3674912_3675233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445571.1|3675229_3676597_-|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
WP_011409095.1|3676742_3677324_+	ribosome-associated protein	NA	NA	NA	NA	NA
WP_012445573.1|3677580_3679026_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
>prophage 32
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	3687121	3758797	5238555	transposase,tRNA	Ralstonia_phage(30.0%)	52	NA	NA
WP_099051291.1|3687121_3687919_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012445578.1|3688218_3691332_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011409102.1|3692747_3693218_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
WP_012445580.1|3693802_3693982_+	DUF839 domain-containing protein	NA	NA	NA	NA	NA
WP_012445581.1|3694307_3695423_-	J domain-containing protein	NA	NA	NA	NA	NA
WP_011259822.1|3695434_3695851_-	ribosome silencing factor	NA	NA	NA	NA	NA
WP_027703805.1|3695907_3696807_-	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA	NA
WP_011259823.1|3696803_3697832_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
WP_011409105.1|3697854_3698490_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445585.1|3699003_3701646_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.8	3.6e-172
WP_011259826.1|3701718_3702330_-	DUF998 domain-containing protein	NA	NA	NA	NA	NA
WP_012445586.1|3702534_3703392_+	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	41.8	1.3e-11
WP_027703806.1|3703647_3704097_+	DUF4442 domain-containing protein	NA	NA	NA	NA	NA
WP_041182721.1|3704396_3705362_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_094187715.1|3705486_3706249_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_027704065.1|3706859_3707153_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011259829.1|3707626_3707860_+	DUF378 domain-containing protein	NA	NA	NA	NA	NA
WP_011409111.1|3707893_3708907_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
WP_012445591.1|3708874_3709066_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115877373.1|3709156_3710476_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011407913.1|3710563_3711778_-|transposase	IS4-like element ISXo14 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	1.8e-54
WP_011258188.1|3712478_3713447_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_041182722.1|3713607_3714573_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_094187771.1|3714813_3715576_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011409116.1|3715878_3718011_+	glycogen debranching protein GlgX	NA	NA	NA	NA	NA
WP_011258802.1|3718561_3719530_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_115877400.1|3719674_3720640_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_048488802.1|3720686_3721019_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_094187715.1|3721015_3721779_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_094187763.1|3722650_3723448_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011409118.1|3723481_3723874_-	H-NS histone family protein	NA	NA	NA	NA	NA
WP_027704094.1|3723964_3724357_-	hypothetical protein	NA	NA	NA	NA	NA
WP_048488803.1|3726590_3727097_+	hypothetical protein	NA	C8CLF4	Xylella_phage	66.0	3.5e-28
WP_012445601.1|3728841_3730626_-	autotransporter domain-containing esterase	NA	NA	NA	NA	NA
WP_011259851.1|3730816_3731017_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
WP_011409125.1|3731552_3732347_+	thiazole synthase	NA	NA	NA	NA	NA
WP_011259853.1|3732648_3733407_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
WP_011259854.1|3733482_3735345_+	SLC13 family permease	NA	NA	NA	NA	NA
WP_011409127.1|3735402_3735744_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
WP_011259856.1|3736003_3736279_+	hypothetical protein	NA	NA	NA	NA	NA
WP_070808022.1|3736417_3737794_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.8	1.1e-76
WP_011259859.1|3739326_3740040_+	fumarylacetoacetate hydrolase family protein	NA	NA	NA	NA	NA
WP_012445603.1|3740100_3740523_+	large-conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
WP_094187715.1|3740654_3741418_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011409134.1|3744491_3745403_-	RNA methyltransferase	NA	NA	NA	NA	NA
WP_033013519.1|3745918_3746056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109182027.1|3746750_3747716_-|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_041182725.1|3748595_3751265_-	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	48.3	1.8e-240
WP_011259867.1|3751616_3754742_-	efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	22.8	7.0e-74
WP_041182726.1|3754738_3755809_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_011258802.1|3756309_3757278_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_115877360.1|3757477_3758797_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
>prophage 33
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	3788523	3868761	5238555	transposase,plate	Tupanvirus(11.11%)	53	NA	NA
WP_012445627.1|3788523_3789525_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011259891.1|3790551_3792657_+	catalase	NA	A0A2K9L572	Tupanvirus	48.1	5.1e-137
WP_027703311.1|3793482_3794721_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182727.1|3794948_3797090_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011259895.1|3797922_3798648_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
WP_011409154.1|3798779_3799241_-	hypothetical protein	NA	NA	NA	NA	NA
WP_027704153.1|3801355_3803476_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_027704154.1|3803742_3804588_-	transporter	NA	NA	NA	NA	NA
WP_011259903.1|3805712_3807683_-	oligopeptide transporter, OPT family	NA	NA	NA	NA	NA
WP_027704155.1|3808111_3809509_+	endoproteinase ArgC	NA	NA	NA	NA	NA
WP_027704156.1|3809621_3810440_-	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_012445640.1|3810750_3814002_-	error-prone DNA polymerase	NA	A0A1B1PA77	Streptomyces_phage	24.8	1.8e-80
WP_075239010.1|3813988_3814171_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011259908.1|3814183_3815602_-	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_011259909.1|3815611_3816262_-	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA	NA
WP_011259910.1|3816263_3816869_-	repressor LexA	NA	A0A1W6JNS2	Morganella_phage	39.2	8.6e-13
WP_012445642.1|3817018_3817240_+	transcriptional regulator	NA	NA	NA	NA	NA
WP_012445643.1|3817249_3817675_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A1B3AYM0	Gordonia_phage	44.0	1.5e-08
WP_011409167.1|3819190_3819970_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
WP_011409168.1|3820184_3820814_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_027704159.1|3820874_3821630_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182729.1|3821958_3822735_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182730.1|3823143_3824718_+	serine/threonine protein kinase	NA	NA	NA	NA	NA
WP_012445648.1|3824966_3825233_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182545.1|3826503_3827460_-|transposase	IS30-like element IS1112b family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.0	6.2e-42
WP_012445651.1|3828878_3830348_-	SAM-dependent DNA methyltransferase	NA	J7I0U9	Acinetobacter_phage	33.6	9.3e-29
WP_012445652.1|3830352_3831075_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445654.1|3831774_3834156_-	DEAD/DEAH box helicase family protein	NA	NA	NA	NA	NA
WP_012445655.1|3834234_3834543_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_011259930.1|3834549_3834813_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445656.1|3835122_3838596_+	type I restriction-modification system endonuclease	NA	A0A1B1IW48	uncultured_Mediterranean_phage	21.9	1.9e-08
WP_041182733.1|3838735_3839734_+	Abi family protein	NA	NA	NA	NA	NA
WP_012445658.1|3839780_3841325_+	N-6 DNA methylase	NA	A0A220A2U5	Liberibacter_phage	24.2	1.2e-13
WP_113341666.1|3841314_3842808_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_041182734.1|3842841_3843150_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_011259930.1|3843156_3843420_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182735.1|3844151_3844907_+	type VI secretion system tip protein VgrG	NA	NA	NA	NA	NA
WP_041182736.1|3845200_3846223_-	hypothetical protein	NA	NA	NA	NA	NA
WP_082357010.1|3846232_3848248_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182737.1|3848732_3849764_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445666.1|3849772_3852634_-	DUF3784 domain-containing protein	NA	NA	NA	NA	NA
WP_053077061.1|3852652_3853558_-	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
WP_011259938.1|3856354_3856708_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012445669.1|3856758_3859491_-	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	29.6	7.1e-91
WP_012445670.1|3859576_3860668_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_011259941.1|3860631_3862467_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_011259942.1|3862469_3862958_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_003467612.1|3863105_3863603_-	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_011259943.1|3863744_3865241_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_011259944.1|3865244_3865745_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_012445672.1|3865791_3866280_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011409206.1|3866666_3867275_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_011259947.1|3867426_3868761_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 34
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	4064734	4215156	5238555	transposase	Xanthomonas_phage(34.78%)	108	NA	NA
WP_012445794.1|4064734_4065970_+|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_011258091.1|4066391_4067780_-	amino acid permease	NA	NA	NA	NA	NA
WP_011258090.1|4068535_4069477_-	proline iminopeptidase-family hydrolase	NA	NA	NA	NA	NA
WP_011407882.1|4069790_4070555_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011407881.1|4070747_4072130_+	APC family permease	NA	NA	NA	NA	NA
WP_011258087.1|4072569_4073967_+	trypsin-like peptidase domain-containing protein	NA	NA	NA	NA	NA
WP_012445797.1|4074529_4074928_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011258085.1|4075072_4076077_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_011258084.1|4076114_4077632_-	tryptophan 7-halogenase	NA	A0A1D7SEI2	Cyanophage	32.3	8.1e-52
WP_012445799.1|4077672_4078719_-	cupin-like domain-containing protein	NA	NA	NA	NA	NA
WP_041182936.1|4078729_4079482_-	SapC family protein	NA	NA	NA	NA	NA
WP_027703605.1|4079813_4082972_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_012445804.1|4084018_4086025_-	M1 family metallopeptidase	NA	NA	NA	NA	NA
WP_011258079.1|4086244_4086691_-	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
WP_011258077.1|4088682_4089849_-	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	42.1	5.8e-74
WP_011407870.1|4089850_4090423_-	DUF1190 domain-containing protein	NA	A0A191ZBZ0	Erwinia_phage	27.7	1.1e-09
WP_011407869.1|4090435_4090840_-	DUF350 domain-containing protein	NA	NA	NA	NA	NA
WP_012445805.1|4090877_4091555_-	YjfK family protein	NA	NA	NA	NA	NA
WP_041182757.1|4091551_4092634_-	potassium channel protein	NA	NA	NA	NA	NA
WP_011258072.1|4092659_4093433_-	PspA/IM30 family protein	NA	NA	NA	NA	NA
WP_012445807.1|4093445_4093862_-	YjfI family protein	NA	NA	NA	NA	NA
WP_011258070.1|4094042_4094642_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
WP_011258069.1|4094808_4095351_+	shikimate kinase	NA	NA	NA	NA	NA
WP_011258068.1|4095347_4096460_+	3-dehydroquinate synthase	NA	NA	NA	NA	NA
WP_011407864.1|4096761_4097013_+	WGR domain-containing protein	NA	NA	NA	NA	NA
WP_011258066.1|4097027_4098092_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_027703611.1|4098155_4098389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182758.1|4099563_4103280_+	avirulence protein	NA	NA	NA	NA	NA
WP_041182100.1|4103548_4103743_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	80.6	2.5e-19
WP_011407856.1|4103746_4104046_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	93.5	9.9e-47
WP_012445810.1|4104269_4108721_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_012445811.1|4108989_4109184_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	80.6	2.0e-19
WP_041182759.1|4109187_4109487_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	91.3	9.3e-45
WP_082356976.1|4109626_4113121_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_012445814.1|4113389_4113584_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	80.6	8.8e-20
WP_041182761.1|4113587_4113887_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	92.4	1.9e-45
WP_041182762.1|4114110_4117119_+	TAL effector repeat-containing protein	NA	NA	NA	NA	NA
WP_041182763.1|4117387_4117582_+	hypothetical protein	NA	A0A1W6DXV7	Xanthomonas_phage	92.2	2.5e-19
WP_011407856.1|4117585_4117885_+	hypothetical protein	NA	A0A1W6DY99	Xanthomonas_phage	93.5	9.9e-47
WP_041182764.1|4118108_4122236_+	avirulence protein	NA	NA	NA	NA	NA
WP_012444927.1|4122454_4122631_+|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
WP_012445821.1|4122627_4123299_+|transposase	IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	36.8	3.1e-24
WP_012445822.1|4123320_4124190_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.0	1.2e-28
WP_027703880.1|4124686_4127866_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_027703881.1|4128151_4129441_+	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
WP_011407850.1|4132831_4133281_-	azurin	NA	NA	NA	NA	NA
WP_011407846.1|4134723_4135227_-	RidA family protein	NA	NA	NA	NA	NA
WP_011258050.1|4135251_4135677_-	cytochrome c	NA	NA	NA	NA	NA
WP_011407844.1|4137358_4137703_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011407842.1|4138825_4139443_+	HAD-IA family hydrolase	NA	NA	NA	NA	NA
WP_012445828.1|4139689_4140916_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	25.1	3.1e-17
WP_011258047.1|4140988_4141861_+	ion transporter	NA	NA	NA	NA	NA
WP_094187758.1|4143121_4143920_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011407839.1|4144000_4144660_-	serine/threonine protein kinase	NA	NA	NA	NA	NA
WP_011407838.1|4144811_4146899_+	VTT domain-containing protein	NA	NA	NA	NA	NA
WP_012445831.1|4147073_4148054_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	61.5	3.7e-98
WP_012445833.1|4148457_4149375_+	30S ribosomal protein S6--L-glutamate ligase	NA	A0A1D7SR78	Cyanophage	32.7	1.3e-31
WP_027704066.1|4149588_4149978_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407833.1|4150057_4150735_+	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	27.4	7.4e-05
WP_011258803.1|4150949_4151918_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	1.5e-99
WP_027704076.1|4152357_4153677_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
WP_115877377.1|4153786_4154752_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_094187715.1|4154840_4155604_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011407830.1|4155991_4156993_-	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
WP_153296750.1|4157649_4157790_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407587.1|4159540_4160575_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
WP_012445839.1|4161979_4162753_+	S1/P1 nuclease	NA	NA	NA	NA	NA
WP_011258028.1|4162766_4163597_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
WP_011407824.1|4163667_4164444_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_012445841.1|4164454_4165147_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_011407823.1|4165146_4165761_+	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.0	2.1e-19
WP_011407822.1|4166103_4166688_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407820.1|4167990_4168356_-	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA	NA
WP_041182938.1|4168455_4169817_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
WP_041182767.1|4169834_4170533_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.5	6.4e-28
WP_011407815.1|4171199_4172039_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_011407814.1|4172038_4172713_-	iron-containing redox enzyme family protein	NA	NA	NA	NA	NA
WP_027703581.1|4172709_4174209_-	AMP-binding protein	NA	NA	NA	NA	NA
WP_027703582.1|4174205_4174853_-	thermostable hemolysin	NA	NA	NA	NA	NA
WP_011258012.1|4177121_4178297_+	phosphatidylinositol-specific phospholipase C1-like protein	NA	NA	NA	NA	NA
WP_041182768.1|4178426_4181141_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_080256611.1|4181460_4182453_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
WP_012445854.1|4182455_4183172_+	M23 family metallopeptidase	NA	A0A0M5M794	Arthrobacter_phage	34.2	9.2e-06
WP_011258007.1|4183990_4185991_-	transketolase	NA	NA	NA	NA	NA
WP_012445856.1|4186217_4187447_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
WP_033013273.1|4187695_4188013_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407804.1|4188308_4190066_-	BatD family protein	NA	NA	NA	NA	NA
WP_041182769.1|4190062_4191880_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_012445858.1|4191876_4192884_-	VWA domain-containing protein	NA	NA	NA	NA	NA
WP_011258002.1|4192880_4193342_-	DUF4381 domain-containing protein	NA	NA	NA	NA	NA
WP_011258001.1|4193344_4194307_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_012445859.1|4194327_4195347_-	MoxR family ATPase	NA	NA	NA	NA	NA
WP_115877378.1|4195969_4196992_+|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_011407796.1|4197137_4199087_-	type IV pilus secretin PilQ family protein	NA	NA	NA	NA	NA
WP_011257996.1|4199106_4199640_-	pilus assembly protein PilP	NA	NA	NA	NA	NA
WP_011257995.1|4199636_4200302_-	type 4a pilus biogenesis protein PilO	NA	NA	NA	NA	NA
WP_012445864.1|4200298_4201057_-	PilN domain-containing protein	NA	NA	NA	NA	NA
WP_011407795.1|4201056_4202115_-	pilus assembly protein PilM	NA	NA	NA	NA	NA
WP_011257992.1|4202330_4204760_+	penicillin-binding protein 1A	NA	NA	NA	NA	NA
WP_011407794.1|4205069_4205720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011407793.1|4206095_4207385_-	citrate synthase	NA	NA	NA	NA	NA
WP_005911911.1|4207598_4207841_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_012445867.1|4207912_4208851_-	nucleoside hydrolase	NA	NA	NA	NA	NA
WP_012445868.1|4208976_4211130_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
WP_011257987.1|4211150_4211531_-	RidA family protein	NA	NA	NA	NA	NA
WP_011257986.1|4211610_4213782_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.8	2.8e-13
WP_011407791.1|4213910_4214210_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
WP_099051298.1|4214357_4215156_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 35
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	4274312	4338464	5238555	protease,transposase,integrase	Ralstonia_phage(21.43%)	51	4268196:4268213	4346505:4346522
4268196:4268213	attL	GCGCCGGCAGCGCCTGCG	NA	NA	NA	NA
WP_012445901.1|4274312_4275548_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_011407751.1|4276536_4278138_+	rhamnogalacturonase B	NA	NA	NA	NA	NA
WP_041182379.1|4278754_4279501_-	cellulase	NA	NA	NA	NA	NA
WP_113341642.1|4279973_4280732_-	cellulase	NA	NA	NA	NA	NA
WP_011407749.1|4281248_4281764_-	peptide deformylase	NA	NA	NA	NA	NA
WP_027703699.1|4282085_4282508_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	62.2	1.8e-41
WP_012445908.1|4283279_4285148_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
WP_011407746.1|4285186_4286140_+	MoxR family ATPase	NA	NA	NA	NA	NA
WP_011257917.1|4286145_4287102_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
WP_011257916.1|4287094_4289047_+	DUF3488 domain-containing transglutaminase family protein	NA	NA	NA	NA	NA
WP_011257915.1|4289043_4289577_+	Slp family lipoprotein	NA	NA	NA	NA	NA
WP_011407744.1|4289696_4290047_-	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
WP_011257913.1|4290148_4290742_-	recombination protein RecR	NA	NA	NA	NA	NA
WP_011257912.1|4290839_4291160_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
WP_011257911.1|4291166_4293263_-	DNA polymerase III subunit gamma/tau	NA	E7DN81	Pneumococcus_phage	40.7	4.1e-46
WP_011257910.1|4293824_4294271_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
WP_011257909.1|4294267_4294513_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
WP_011407742.1|4294509_4295007_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
WP_011257907.1|4295031_4295391_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
WP_011257906.1|4295408_4296440_-	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
WP_011257905.1|4296439_4297189_-	MBL fold metallo-hydrolase	NA	A0A0A0RUN7	Bacillus_phage	26.0	2.4e-09
WP_011257904.1|4297188_4297938_-	3-deoxy-D-manno-octulosonic acid kinase	NA	NA	NA	NA	NA
WP_011257903.1|4297958_4299008_+	glycosyltransferase family 9 protein	NA	NA	NA	NA	NA
WP_011257902.1|4299218_4299623_-	hypothetical protein	NA	A0A1C9C5K8	Heterosigma_akashiwo_virus	35.9	5.0e-17
WP_011407739.1|4299733_4300420_+|integrase	site-specific integrase	integrase	A0A077KET4	Ralstonia_phage	51.8	2.3e-54
WP_115862289.1|4300518_4301484_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_012445918.1|4301566_4302124_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182772.1|4302443_4304141_-	DUF2875 family protein	NA	NA	NA	NA	NA
WP_012445921.1|4304137_4306342_-	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	29.7	3.5e-19
WP_041182773.1|4306403_4306667_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_012445924.1|4306663_4308346_-	DUF2875 family protein	NA	NA	NA	NA	NA
WP_012445925.1|4308342_4310490_-	DUF3274 domain-containing protein	NA	A0A077K801	Ralstonia_phage	29.7	1.2e-27
WP_012445926.1|4310555_4313276_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	29.7	2.4e-70
WP_012445927.1|4313671_4313872_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407730.1|4314768_4315398_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012445930.1|4316224_4316929_+	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
WP_012445931.1|4317364_4318099_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	40.4	1.1e-35
WP_011257888.1|4318107_4318560_-	ribonuclease HI	NA	A0A1Q2U2R0	Vibrio_phage	55.4	2.8e-40
WP_011257887.1|4318587_4319244_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257886.1|4319256_4320024_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
WP_041182774.1|4320020_4321199_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA	NA
WP_027704260.1|4321925_4323896_-	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_002806049.1|4324727_4325000_-	HU family DNA-binding protein	NA	A7KV42	Bacillus_phage	64.0	2.2e-21
WP_012445937.1|4325213_4327685_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.2	1.7e-224
WP_012445938.1|4327828_4329115_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.9	9.0e-137
WP_002806026.1|4329239_4329866_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
WP_012445939.1|4329958_4331251_-	trigger factor	NA	NA	NA	NA	NA
WP_011257875.1|4334568_4335330_+	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
WP_011257874.1|4335473_4336481_-	isocitrate dehydrogenase	NA	NA	NA	NA	NA
WP_041182775.1|4336744_4337710_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_094187737.1|4337710_4338464_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
4346505:4346522	attR	CGCAGGCGCTGCCGGCGC	NA	NA	NA	NA
>prophage 36
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	4387039	4503902	5238555	protease,transposase	Acinetobacter_phage(12.5%)	81	NA	NA
WP_099051299.1|4387039_4387802_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_012445975.1|4387796_4388039_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
WP_011407721.1|4388587_4389049_+	cell wall hydrolase	NA	NA	NA	NA	NA
WP_115877360.1|4389330_4390650_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_041182777.1|4390861_4391755_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.5	3.1e-96
WP_094187728.1|4393135_4393934_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011257834.1|4394175_4394790_+	glutathione S-transferase C-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_012445978.1|4394872_4395859_-	malate dehydrogenase	NA	NA	NA	NA	NA
WP_011257836.1|4395974_4396469_-	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	52.3	5.5e-26
WP_011257837.1|4396713_4398543_+	translational GTPase TypA	NA	NA	NA	NA	NA
WP_011407704.1|4398561_4399032_+	DUF2127 domain-containing protein	NA	NA	NA	NA	NA
WP_011257840.1|4399954_4401082_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
WP_011257841.1|4401182_4402565_-	3-deoxy-7-phosphoheptulonate synthase class II	NA	NA	NA	NA	NA
WP_012445979.1|4402812_4404936_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011407706.1|4405464_4405983_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
WP_011407710.1|4410179_4411070_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_012445986.1|4411159_4411300_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
WP_109182089.1|4415757_4417077_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_041182948.1|4417822_4418746_+|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	33.1	1.3e-36
WP_094187763.1|4418933_4419731_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_094187736.1|4420652_4421415_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_115877379.1|4421504_4422470_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_011257859.1|4422771_4424349_+	hypothetical protein	NA	NA	NA	NA	NA
WP_094187735.1|4424416_4425180_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_041182779.1|4425246_4426452_+|transposase	IS4 family transposase	transposase	A0A0F7LAS3	uncultured_marine_virus	33.4	6.9e-54
WP_099051302.1|4427823_4428621_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011257831.1|4429593_4430478_-	membrane protein	NA	NA	NA	NA	NA
WP_027703752.1|4430624_4431221_-	LON peptidase substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_033013335.1|4431220_4432579_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
WP_011257828.1|4432945_4433509_-	adenylate kinase	NA	A0A1B4XWI3	Tenacibaculum_phage	31.4	3.6e-13
WP_012446003.1|4433668_4434925_+	6-phosphofructokinase	NA	NA	NA	NA	NA
WP_109181928.1|4435495_4436461_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_012446005.1|4436604_4437096_-	hypothetical protein	NA	NA	NA	NA	NA
WP_109182120.1|4437380_4437554_+	sodium/proton-translocating pyrophosphatase	NA	NA	NA	NA	NA
WP_041182780.1|4437550_4438516_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011407697.1|4440769_4441252_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257818.1|4441448_4441985_+	inorganic diphosphatase	NA	A0A2H4J8U1	uncultured_Caudovirales_phage	53.6	3.6e-47
WP_011257817.1|4442098_4443247_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
WP_027703666.1|4443861_4446828_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	24.9	8.7e-42
WP_011407695.1|4446876_4447770_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_041182781.1|4447880_4450232_-	PD40 domain-containing protein	NA	NA	NA	NA	NA
WP_011407693.1|4450657_4452535_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
WP_011257812.1|4453811_4454813_+	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
WP_011257811.1|4454856_4456578_+	acetolactate synthase 2 catalytic subunit	NA	E4WLQ6	Ostreococcus_tauri_virus	32.9	6.1e-64
WP_011257810.1|4456561_4456819_+	acetolactate synthase	NA	NA	NA	NA	NA
WP_011407691.1|4456894_4458019_+	threonine dehydratase	NA	NA	NA	NA	NA
WP_011407690.1|4458015_4459578_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	24.4	4.3e-08
WP_011257808.1|4459908_4460982_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_012446015.1|4461018_4461804_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
WP_011257807.1|4461800_4462448_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_011257806.1|4462515_4463964_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_027703665.1|4464084_4464969_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_115862292.1|4465942_4466908_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011407687.1|4467076_4467538_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257800.1|4467808_4468462_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
WP_041182783.1|4468590_4469247_+	protein-L-isoaspartate O-methyltransferase	NA	NA	NA	NA	NA
WP_011257798.1|4469267_4470647_+	TolC family outer membrane protein	NA	NA	NA	NA	NA
WP_011257797.1|4470919_4472236_-	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
WP_027704168.1|4472312_4473233_+	LpxL/LpxP family Kdo(2)-lipid IV(A) lauroyl/palmitoleoyl acyltransferase	NA	NA	NA	NA	NA
WP_027704169.1|4473466_4474801_-	O-antigen ligase family protein	NA	NA	NA	NA	NA
WP_011407685.1|4474781_4475894_-	glycosyltransferase	NA	NA	NA	NA	NA
WP_011257793.1|4475903_4476101_-	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
WP_103057263.1|4476226_4476760_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182784.1|4477386_4478022_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_011257788.1|4479752_4480535_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_012446023.1|4480728_4483401_-	M1 family metallopeptidase	NA	A0A0P0IY26	Acinetobacter_phage	28.0	3.4e-77
WP_012446024.1|4483726_4485019_-	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	37.7	6.4e-74
WP_011257785.1|4485356_4485542_-	DUF2065 family protein	NA	NA	NA	NA	NA
WP_027703756.1|4485836_4486700_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
WP_011407680.1|4486699_4487827_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
WP_011257782.1|4488456_4488843_-	twitching motility response regulator PilH	NA	W8CYM9	Bacillus_phage	31.8	9.6e-10
WP_012446026.1|4489082_4489982_-	DnaJ domain-containing protein	NA	A0A2L0UZR4	Agrobacterium_phage	27.7	5.9e-18
WP_011407679.1|4490392_4490869_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
WP_011257779.1|4491031_4491514_+	peroxiredoxin	NA	A0A1D8KSL1	Synechococcus_phage	36.2	3.1e-21
WP_012446027.1|4491556_4492117_+	bacterioferritin	NA	NA	NA	NA	NA
WP_041182785.1|4492251_4493214_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.8	1.5e-43
WP_012445794.1|4495639_4496875_-|transposase	ISL3 family transposase	transposase	NA	NA	NA	NA
WP_011407676.1|4497120_4497657_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041182786.1|4498155_4499103_-	glycerophosphodiester phosphodiesterase family protein	NA	M1HTS7	Paramecium_bursaria_Chlorella_virus	28.5	4.9e-07
WP_027703870.1|4499277_4502265_-	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_094187728.1|4503103_4503902_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 37
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	4530610	4600496	5238555	transposase,tRNA	Ralstonia_phage(20.0%)	48	NA	NA
WP_041182787.1|4530610_4531576_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_041182788.1|4531687_4533979_+	CRISPR-associated helicase/endonuclease Cas3	NA	NA	NA	NA	NA
WP_011257746.1|4534106_4534781_+	type I-C CRISPR-associated protein Cas5	NA	NA	NA	NA	NA
WP_011257745.1|4534777_4536622_+	type I-C CRISPR-associated protein Cas8c/Csd1	NA	NA	NA	NA	NA
WP_011257744.1|4536618_4537485_+	type I-C CRISPR-associated protein Cas7/Csd2	NA	NA	NA	NA	NA
WP_011257743.1|4537504_4538137_+	CRISPR-associated protein Cas4	NA	NA	NA	NA	NA
WP_011407655.1|4538139_4539174_+	type I-C CRISPR-associated endonuclease Cas1	NA	NA	NA	NA	NA
WP_011257741.1|4539188_4539479_+	CRISPR-associated endonuclease Cas2	NA	NA	NA	NA	NA
WP_011407652.1|4545996_4546836_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_012446059.1|4547446_4548604_+	phosphotransferase	NA	NA	NA	NA	NA
WP_027704104.1|4548639_4550802_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011407648.1|4551177_4551753_+	nicotinamide mononucleotide transporter	NA	NA	NA	NA	NA
WP_011257733.1|4551858_4552587_+	UTRA domain-containing protein	NA	NA	NA	NA	NA
WP_011257732.1|4553003_4553843_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257731.1|4553839_4556152_-	type II secretion system secretin GspD	NA	A7BJX1	Enterobacteria_phage	23.5	5.2e-10
WP_027704103.1|4556148_4556958_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407646.1|4556947_4557601_-	type II secretion system protein M	NA	NA	NA	NA	NA
WP_012446064.1|4557584_4558706_-	PilN domain-containing protein	NA	NA	NA	NA	NA
WP_011407644.1|4558702_4559554_-	general secretion pathway protein GspK	NA	NA	NA	NA	NA
WP_012446065.1|4559550_4560186_-	type II secretion system protein J	NA	NA	NA	NA	NA
WP_012446066.1|4560182_4560599_-	prepilin-type N-terminal cleavage/methylation domain-containing protein	NA	NA	NA	NA	NA
WP_011257724.1|4560595_4561105_-	GspH/FimT family pseudopilin	NA	NA	NA	NA	NA
WP_011407642.1|4561114_4561546_-	type II secretion system major pseudopilin GspG	NA	NA	NA	NA	NA
WP_011257722.1|4561813_4563031_-	type II secretion system F family protein	NA	NA	NA	NA	NA
WP_041181968.1|4563030_4563210_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257721.1|4563206_4564889_-	type II secretion system ATPase GspE	NA	NA	NA	NA	NA
WP_075240544.1|4565063_4565609_-	S8 family serine peptidase	NA	NA	NA	NA	NA
WP_012446071.1|4565626_4566139_-	S8 family serine peptidase	NA	A0A1B0T6A2	Bacillus_phage	38.8	5.7e-10
WP_012446073.1|4567166_4570964_-	YadA-like family protein	NA	NA	NA	NA	NA
WP_011257719.1|4571941_4575994_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	56.9	7.5e-121
WP_011257718.1|4576392_4577190_-	DsbC family protein	NA	NA	NA	NA	NA
WP_011257717.1|4577641_4578613_-	site-specific tyrosine recombinase XerD	NA	G1JX48	Mycobacterium_phage	27.9	6.4e-18
WP_011257716.1|4579039_4579507_+	RDD family protein	NA	NA	NA	NA	NA
WP_011407635.1|4579921_4581028_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
WP_011407634.1|4581024_4582107_-	LPS export ABC transporter permease LptF	NA	NA	NA	NA	NA
WP_011257713.1|4582214_4583687_+	leucyl aminopeptidase	NA	Q6GYZ8	Mycoplasma_phage	37.2	6.2e-49
WP_011257712.1|4583686_4583992_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011257711.1|4584032_4584458_+	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
WP_011257710.1|4584665_4587608_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	34.8	6.4e-130
WP_027704099.1|4587615_4587918_+	hypothetical protein	NA	NA	NA	NA	NA
WP_099051304.1|4588544_4589646_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.2	6.5e-43
WP_075239157.1|4589828_4590146_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_115877380.1|4590196_4591516_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_012446083.1|4591728_4592697_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	8.7e-100
WP_011257702.1|4594473_4595514_+	pectate lyase	NA	NA	NA	NA	NA
WP_027704044.1|4595780_4597754_-	transglycosylase SLT domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	36.7	7.9e-15
WP_115877382.1|4598058_4599378_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011258529.1|4599527_4600496_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	8.7e-100
>prophage 38
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	4620283	4630911	5238555		Enterobacteria_phage(57.14%)	10	NA	NA
WP_011407616.1|4620283_4621630_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.9	2.6e-33
WP_011257680.1|4621676_4623080_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.6	2.5e-47
WP_012446096.1|4623196_4624105_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	35.1	1.8e-27
WP_011407614.1|4624101_4624659_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	47.5	2.3e-44
WP_012446097.1|4624655_4625543_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	58.2	2.9e-94
WP_011407612.1|4625598_4626654_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.0	4.3e-84
WP_012446098.1|4626879_4627626_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
WP_012446099.1|4627625_4628567_+	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA	NA
WP_012446100.1|4628789_4629608_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_011407610.1|4629597_4630911_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	3.8e-13
>prophage 39
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	4758202	4804251	5238555	transposase	Staphylococcus_prophage(33.33%)	35	NA	NA
WP_115877386.1|4758202_4759522_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_012446193.1|4762996_4763377_+	response regulator	NA	NA	NA	NA	NA
WP_011257545.1|4763345_4763612_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012446194.1|4763611_4764892_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
WP_033013438.1|4766016_4767417_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
WP_115801902.1|4771644_4772610_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_011407487.1|4772794_4773127_+	divalent-cation tolerance protein CutA	NA	NA	NA	NA	NA
WP_041182799.1|4773132_4775457_+	protein-disulfide reductase DsbD	NA	NA	NA	NA	NA
WP_011407485.1|4776290_4776737_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_011257470.1|4776835_4777321_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
WP_011407484.1|4777353_4777761_+	four helix bundle protein	NA	NA	NA	NA	NA
WP_010368143.1|4777796_4779164_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
WP_011257468.1|4779302_4779668_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094187861.1|4779664_4780057_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407482.1|4780125_4780590_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257466.1|4781535_4782477_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
WP_027703754.1|4782623_4783139_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257464.1|4783282_4783660_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_075239516.1|4784370_4785216_+	DUF3426 domain-containing protein	NA	NA	NA	NA	NA
WP_011257462.1|4785322_4785595_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA	NA
WP_109182067.1|4786279_4787245_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_012446211.1|4787241_4787436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407237.1|4787895_4788852_-|transposase	IS30-like element IS1112a family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
WP_099051307.1|4791338_4792453_-|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	56.9	2.5e-82
WP_075240159.1|4792659_4792890_+	hypothetical protein	NA	NA	NA	NA	NA
WP_082356982.1|4792897_4793914_-	DUF4915 domain-containing protein	NA	NA	NA	NA	NA
WP_041182801.1|4793996_4794341_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_053077065.1|4794783_4795869_+	radical SAM protein	NA	NA	NA	NA	NA
WP_041182802.1|4795865_4796615_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182803.1|4796705_4797647_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
WP_041182804.1|4797892_4798723_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
WP_161798564.1|4798760_4799975_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_161798565.1|4800031_4801975_+	ATP-binding cassette domain-containing protein	NA	F2Y165	Organic_Lake_phycodnavirus	30.0	2.1e-12
WP_041182807.1|4802006_4803038_+	sulfotransferase	NA	NA	NA	NA	NA
WP_048488833.1|4803459_4804251_-|transposase	IS3 family transposase	transposase	NA	NA	NA	NA
>prophage 40
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	4966287	5020788	5238555	transposase,tRNA	Tupanvirus(14.29%)	45	NA	NA
WP_011257354.1|4966287_4967292_-|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
WP_012446316.1|4967754_4967979_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257351.1|4968699_4969275_-	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
WP_012446318.1|4969333_4970857_-	catalase	NA	A0A2K9L0T1	Tupanvirus	48.0	2.2e-97
WP_027704121.1|4971547_4972018_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_012446321.1|4971979_4972168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041182811.1|4972180_4973146_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011407399.1|4973228_4973495_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257345.1|4973768_4975901_-	ATP-dependent DNA helicase DinG	NA	NA	NA	NA	NA
WP_011257344.1|4976178_4976328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407398.1|4976362_4976749_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257342.1|4976750_4977602_-	shikimate dehydrogenase	NA	NA	NA	NA	NA
WP_027703509.1|4977654_4978536_+	PD40 domain-containing protein	NA	NA	NA	NA	NA
WP_011257339.1|4979158_4981693_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_011407395.1|4981926_4982679_+	DNA/RNA non-specific endonuclease	NA	H6X497	Enterobacteria_phage	33.9	5.6e-22
WP_011407394.1|4982806_4983721_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_011257334.1|4984993_4985986_-	porphobilinogen synthase	NA	NA	NA	NA	NA
WP_041182812.1|4986206_4986455_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011257333.1|4986650_4987109_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012446330.1|4987208_4988999_-	DUF885 domain-containing protein	NA	NA	NA	NA	NA
WP_027703506.1|4989207_4991445_-	S9 family peptidase	NA	NA	NA	NA	NA
WP_011257330.1|4991869_4992559_-	glutathione S-transferase N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_011407389.1|4992948_4995963_+	TonB-dependent receptor	NA	NA	NA	NA	NA
WP_011407388.1|4996146_4996848_+	SapC family protein	NA	NA	NA	NA	NA
WP_012446335.1|4996837_4997851_+	cupin-like domain-containing protein	NA	NA	NA	NA	NA
WP_027703504.1|4997861_4999427_+	tryptophan 7-halogenase	NA	E3SL43	Synechococcus_phage	28.8	5.6e-40
WP_011257324.1|4999566_5000589_+	energy transducer TonB	NA	NA	NA	NA	NA
WP_011257323.1|5000998_5002192_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_012446337.1|5002188_5002935_-	ATP-binding cassette domain-containing protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.9	1.5e-19
WP_012446338.1|5002966_5004568_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_011257320.1|5004628_5004829_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_027703502.1|5004825_5005413_-	hypothetical protein	NA	NA	NA	NA	NA
WP_153296754.1|5005616_5005778_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407380.1|5005898_5006171_-	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA	NA
WP_011407379.1|5006236_5007238_+	CDF family Co(II)/Ni(II) efflux transporter DmeF	NA	NA	NA	NA	NA
WP_075240209.1|5007322_5008150_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_011257314.1|5008186_5009182_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	31.0	9.4e-25
WP_012446343.1|5009199_5009991_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_012446344.1|5009993_5010743_+	DUF3800 domain-containing protein	NA	A0A1W6JTE9	Pseudomonas_phage	44.4	4.3e-54
WP_012446345.1|5010861_5011800_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
WP_012446347.1|5012226_5013462_-|transposase	ISL3-like element ISXoo13 family transposase	transposase	NA	NA	NA	NA
WP_082356988.1|5013514_5014702_-|transposase	IS5-like element ISXoo14 family transposase	transposase	NA	NA	NA	NA
WP_099051310.1|5017305_5018407_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	4.7e-41
WP_094187715.1|5019167_5019930_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_099051311.1|5019990_5020788_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 41
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	5029640	5081516	5238555	transposase,tRNA,holin	Staphylococcus_prophage(33.33%)	37	NA	NA
WP_011257289.1|5029640_5030072_+|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
WP_011257288.1|5030074_5030704_+|holin	lysophosphatidylcholine acyltransferase	holin	NA	NA	NA	NA
WP_012446358.1|5031341_5033510_+	peptidyl-dipeptidase Dcp	NA	NA	NA	NA	NA
WP_041182817.1|5033636_5035799_-	hypothetical protein	NA	NA	NA	NA	NA
WP_115877388.1|5036625_5037591_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_041182818.1|5039695_5040055_-	L-fucose mutarotase	NA	NA	NA	NA	NA
WP_011407355.1|5040057_5041359_-	L-fucose:H+ symporter permease	NA	NA	NA	NA	NA
WP_011407354.1|5041539_5042316_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_094187715.1|5042444_5043208_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_011407353.1|5043608_5044193_+	manganese efflux pump MntP family protein	NA	NA	NA	NA	NA
WP_041182965.1|5044385_5047835_-	hybrid sensor histidine kinase/response regulator	NA	NA	NA	NA	NA
WP_041182819.1|5048582_5051225_+	glycosyl hydrolase 115 family protein	NA	NA	NA	NA	NA
WP_027703802.1|5051328_5053728_-	NdvB protein	NA	NA	NA	NA	NA
WP_027703801.1|5053730_5055113_-	MFS transporter	NA	NA	NA	NA	NA
WP_027703800.1|5055270_5055855_+	gluconokinase	NA	NA	NA	NA	NA
WP_027703799.1|5056733_5058488_+	PQQ-binding-like beta-propeller repeat protein	NA	A0A0M4JT37	Mollivirus	35.6	9.6e-81
WP_011257273.1|5058795_5059023_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407344.1|5059003_5059453_-	3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
WP_011257271.1|5059463_5059892_-	hypothetical protein	NA	NA	NA	NA	NA
WP_094187728.1|5061360_5062159_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_115877389.1|5062329_5063655_-|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_115877382.1|5064106_5065426_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_041182821.1|5065538_5066495_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	34.7	3.4e-40
WP_109182027.1|5067339_5068305_+|transposase	IS1595-like element ISXo5 family transposase	transposase	NA	NA	NA	NA
WP_027703982.1|5068322_5068880_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_011257259.1|5068898_5069186_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011407332.1|5069570_5070365_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	27.8	1.7e-08
WP_012446378.1|5070364_5071114_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_012446379.1|5071125_5071677_+	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
WP_011257255.1|5071673_5072336_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_011257254.1|5072325_5072616_+	STAS domain-containing protein	NA	NA	NA	NA	NA
WP_011257253.1|5072626_5073685_+	VacJ family lipoprotein	NA	NA	NA	NA	NA
WP_099051312.1|5075483_5076247_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
WP_041182823.1|5076351_5077314_+|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_011407237.1|5077510_5078467_+|transposase	IS30-like element IS1112a family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.2	2.1e-42
WP_011407325.1|5078718_5079534_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	A0A127AWE5	Bacillus_phage	27.3	6.3e-19
WP_099051333.1|5080414_5081516_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	39.6	3.7e-38
>prophage 42
NC_010717	Xanthomonas oryzae pv. oryzae PXO99A, complete sequence	5238555	5162063	5213680	5238555	protease,transposase	Fowlpox_virus(11.11%)	40	NA	NA
WP_115877401.1|5162063_5163029_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
WP_041182969.1|5163204_5164620_-	amino acid permease	NA	NA	NA	NA	NA
WP_011409813.1|5165890_5167435_+	DNA recombination protein RmuC	NA	NA	NA	NA	NA
WP_041182970.1|5167840_5168203_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011409815.1|5168580_5169126_+	glutathione peroxidase	NA	Q70H87	Fowlpox_virus	33.9	2.6e-16
WP_115877390.1|5170787_5172107_+|transposase	IS701 family transposase	transposase	NA	NA	NA	NA
WP_011260845.1|5172379_5173507_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
WP_082357016.1|5173470_5174205_-	2OG-Fe(II) oxygenase	NA	V5UTP7	Synechococcus_phage	47.6	2.6e-16
WP_011409820.1|5174425_5175766_-	outer membrane protein transport protein	NA	NA	NA	NA	NA
WP_011409821.1|5175982_5176675_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
WP_011409822.1|5176791_5177112_+	DUF1820 family protein	NA	NA	NA	NA	NA
WP_011260850.1|5177111_5178104_+	D-2-hydroxyacid dehydrogenase family protein	NA	M1HUT5	Acanthocystis_turfacea_Chlorella_virus	27.4	8.5e-10
WP_011409823.1|5178410_5179934_-	PDZ domain-containing protein	NA	A0A0R6PIZ1	Moraxella_phage	29.2	1.7e-25
WP_012446448.1|5180038_5181274_-	peptidoglycan DD-metalloendopeptidase family protein	NA	NA	NA	NA	NA
WP_027703884.1|5181434_5182091_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012446450.1|5182241_5184053_+	M28 family peptidase	NA	NA	NA	NA	NA
WP_011409826.1|5184200_5184551_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_027703798.1|5187462_5188644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012446454.1|5188741_5192173_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_011409830.1|5192320_5193019_-	DUF4194 domain-containing protein	NA	NA	NA	NA	NA
WP_011260862.1|5193002_5194475_-	DUF3375 domain-containing protein	NA	NA	NA	NA	NA
WP_027703796.1|5194471_5195059_-	DUF4276 family protein	NA	NA	NA	NA	NA
WP_011260863.1|5195058_5196255_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_041182832.1|5196328_5196931_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	48.9	2.0e-46
WP_103057218.1|5197638_5198166_+	TolC family protein	NA	NA	NA	NA	NA
WP_011409837.1|5198162_5198729_+	FUSC family protein	NA	NA	NA	NA	NA
WP_027703794.1|5199004_5200366_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	26.9	8.3e-32
WP_012446460.1|5200479_5200782_-	YdeI/OmpD-associated family protein	NA	NA	NA	NA	NA
WP_075239643.1|5200703_5200985_-	DUF1905 domain-containing protein	NA	NA	NA	NA	NA
WP_011407587.1|5201161_5202196_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	32.8	8.0e-43
WP_012446461.1|5202268_5203483_+	phospholipase	NA	NA	NA	NA	NA
WP_012446463.1|5203732_5203939_+	hypothetical protein	NA	NA	NA	NA	NA
WP_027703792.1|5203925_5205038_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_041182834.1|5206787_5207744_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.4	2.1e-42
WP_075239573.1|5208290_5209037_-	immunity 52 family protein	NA	NA	NA	NA	NA
WP_075239572.1|5209033_5209741_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012446470.1|5209754_5210096_-	hypothetical protein	NA	NA	NA	NA	NA
WP_053070570.1|5210076_5210634_-	DUF4123 domain-containing protein	NA	A4PE24	Ralstonia_virus	34.4	5.3e-09
WP_027704109.1|5210582_5210993_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_041182836.1|5212873_5213680_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
