bac_id	spacer_id	hit_phage_id	hit_phage_def	spacer_sequence	hit_phage_region	hit_phage_sequence	mismatch	coverage	hmm_mismatch
NC_010995	3.1|1933087|33|NC_010995|CRISPRCasFinder	MK798157	Enterococcus hirae strain fas4 plasmid pfas4-1, complete sequence	TCTTCTTTGCCGATTCAAAAGTGACCCGTGTCA	11606-11638	GATTCGTTGGCGATTCAAAAGTGACCAAACCCC	2	0.7272727272727273	10
NC_010995	3.1|1933087|33|NC_010995|CRISPRCasFinder	NZ_MF807214	Streptococcus thermophilus strain CS17 plasmid CS17-C, complete sequence	TCTTCTTTGCCGATTCAAAAGTGACCCGTGTCA	2730-2762	GATTCGTTGGCGATTCAAAAGTGACCAAACCCC	2	0.7272727272727273	10
NC_010995	4.11|2798175|36|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MK416015	Klebsiella phage ST16-OXA48phi5.4, complete genome	GTCCGCGAGGATCTGCGCTGTACGGGTGTAGTTCTC	35759-35794	GTCCGCCAGGATCTGCGCGGTACGGGTAAACACCTC	2	0.75	7
NC_010995	4.13|2798309|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP017941	Phyllobacterium zundukense strain Tri-48 plasmid unnamed1, complete sequence	CCGCCAAGCAATCCACGTTTGTCACCGAATATCT	234622-234655	ATAATTTCGGGGACAAGCGTGGATTGCTTGCAGC	2	0.7352941176470589	8
NC_010995	4.21|2798839|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP032678	Pseudomonas sp. Leaf58 plasmid pBASL58, complete sequence	CAATCATGGCGGCTGCCAATAATCAATTAACGCCT	304739-304773	TATATAGAATTGAGTATTGGCAGGCGCCATGAAGG	2	0.7142857142857143	9
NC_010995	4.28|2799303|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MN617835	Enterobacter phage prasa_myo, complete genome	ACTTTAGCGATGGCAACCAGAACATCAACAACAA	20596-20629	TTGTTGTTGATGTTCTTGTCGCCATAACGAGACT	2	0.7352941176470589	7
NC_010995	4.28|2799303|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MG999954	Enterobacter phage myPSH1140, complete genome	ACTTTAGCGATGGCAACCAGAACATCAACAACAA	20596-20629	TTGTTGTTGATGTTCTTGTCGCCATAACGAGACT	2	0.7352941176470589	7
NC_010995	4.32|2799568|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP023451	Rhizorhabdus dicambivorans strain Ndbn-20 plasmid p2, complete sequence	ATCTGTTCGCGGCTATCGATCTGGCCAATCCCTG	197783-197816	TGGGTGTCTTCCAGATCGAGAGCCGCGCACAGAT	2	0.7058823529411765	9
NC_010995	4.32|2799568|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	CP021185	Sphingomonas wittichii DC-6 plasmid pDC04, complete sequence	ATCTGTTCGCGGCTATCGATCTGGCCAATCCCTG	35504-35537	TGGGTGTCTTCCAGATCGAGAGCCGCGCACAGAT	2	0.7058823529411765	9
NC_010995	4.32|2799568|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP048424	Rhizobium daejeonense strain KACC 13094 plasmid unnamed1, complete sequence	ATCTGTTCGCGGCTATCGATCTGGCCAATCCCTG	22593-22626	CGCTCATTGACCAGATCGACAGCCGCGAAGGTGA	2	0.7058823529411765	11
NC_010995	4.32|2799568|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_AP018666	Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete sequence	ATCTGTTCGCGGCTATCGATCTGGCCAATCCCTG	57364-57397	ATCTGTGCGCGGCTCTCGATCTGGAAGACACCCA	2	0.7058823529411765	9
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	KC699836	Bacillus phage SIOphi, partial genome	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	92560-92593	GTCAATATTGAAATTGAAACCGAGGGATGCTGCG	2	0.7352941176470589	10
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP035025	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pE	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	3489-3522	AATATGCAAGCTTAGTGTCAATTTCAACATTAAT	2	0.7058823529411765	8
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP035025	Lactobacillus plantarum strain 13_3 plasmid plsm_LP12_3_pE	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	19602-19635	AATATGCAAGCTTAGTGTCAATTTCAACATTAAT	2	0.7058823529411765	8
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP012660	Lactobacillus plantarum strain HFC8 isolate Lactobacillus plantarum plasmid pMK06, complete sequence	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	15725-15758	AATATGCAAGCTTAGTGTCAATTTCAACATTAAT	2	0.7058823529411765	8
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_021520	Lactobacillus plantarum 16 plasmid Lp16L, complete sequence	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	4651-4684	AATATGCAAGCTTAGTGTCAATTTCAACATTAAT	2	0.7058823529411765	8
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP046667	Lactobacillus plantarum strain 83-18 plasmid p83-18.7, complete sequence	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	2908-2941	AATATGCAAGCTTAGTGTCAATTTCAACATTAAT	2	0.7058823529411765	8
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_KT149389	Lactobacillus plantarum strain BM4 plasmid pBM3, complete sequence	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	3666-3699	ATTAATGTTGAAATTGACACTAAGCTTGCATATT	2	0.7058823529411765	8
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_021227	Lactobacillus plantarum subsp. plantarum P-8 plasmid LBPp5, complete sequence	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	1148-1181	ATTAATGTTGAAATTGACACTAAGCTTGCATATT	2	0.7058823529411765	8
NC_010995	4.41|2800163|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP028981	Lactobacillus plantarum strain LQ80 plasmid pLQ804, complete sequence	TTTCTTATCCCTTGGTGTCAATTTCAATATTAAT	13348-13381	ATTAATGTTGAAATTGACACTAAGCTTGCATATT	2	0.7058823529411765	8
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_028879	Pseudomonas phage PaMx42, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	33034-33068	TTCGCCCGCTTCGGTCGCTTTGCCGATGATCGCAT	1	1.0	1
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_017864	Pseudomonas phage vB_Pae-Kakheti25, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	32693-32727	TTCGCCCGCTTCGGTCGCTTTGCCGATAATTGCAT	1	1.0	1
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	DQ163913	Bacteriophage PA73, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	32771-32805	TTCGCCCGCTTCGGTCGCTTTGCCGATAATTGCAT	1	1.0	1
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_007806	Pseudomonas phage 73, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	32771-32805	TTCGCCCGCTTCGGTCGCTTTGCCGATAATTGCAT	1	1.0	1
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	LC581504	Staphylococcus phage vB_PaeS-Yazdi-M DNA, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	22195-22229	ATGCAATCATCGGCAAAGCGACCGAAGCGGGCGAA	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	LC552830	Pseudomonas phage vB_PaeS-Yazdi-M DNA, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	22195-22229	ATGCAATCATCGGCAAAGCGACCGAAGCGGGCGAA	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MN062187	Xanthomonas phage Samson, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	33110-33144	TTCGCCCGCTTCGGTCGCTTTGCCGATGATTGCAT	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	LZ998060	JP 2017534684-A/7: Phage Therapy	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	36913-36947	TTCGCCCGCTTCGGTCGCTTTACCGATGATCGCAT	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	JQ067086	UNVERIFIED: Pseudomonas phage PaMx10, partial genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	2050-2084	TTCGCCCGCTTCGGTCGCCTTGCCGATAATTGCAT	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MK165657	Pseudomonas phage vB_PaeS_SCUT-S3, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	31928-31962	TTCGCCCGCTTCGGTCGCTTTGCCGATGATTGCAT	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MK165658	Pseudomonas phage vB_PaeS_SCUT-S4, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	32682-32716	TTCGCCCGCTTCGGTCGCCTTGCCGATAATTGCAT	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	KM434185	Pseudomonas phage vB_Pae_PS9N, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	38424-38458	TTCGCCCGCTTCGGTCGCCTTGCCGATAATTGCAT	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	LQ277712	Sequence 7 from Patent WO2016071503	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	36913-36947	TTCGCCCGCTTCGGTCGCTTTACCGATGATCGCAT	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	KR537872	Stenotrophomonas phage vB_SmaS-DLP_1, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	32762-32796	TTCGCCCGCTTCGGTCGCCTTGCCGATAATTGCAT	2	1.0	2
NC_010995	4.48|2800622|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_018278	Burkholderia phage KL1, complete genome	TTCGCCCGCTTCGGTCGCTTTGCCGATAATCGCAT	33308-33342	TTCGCCCGCTTCGGTTGCCTTGCCGATAATACCGT	2	0.8571428571428571	5
NC_010995	4.51|2800823|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP043059	Dolichospermum sp. UHCC 0315A plasmid pUHCC0315c, complete sequence	CTGAAACATACCTTCGCGCCAAGCAAATGCTTTT	69830-69863	TTTAGCCGCACCTTCTCGCCAAGCTAATGCTTTA	2	0.7058823529411765	9
NC_010995	4.51|2800823|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_007410	Trichormus variabilis ATCC 29413 plasmid A, complete sequence	CTGAAACATACCTTCGCGCCAAGCAAATGCTTTT	341151-341184	TAAAGCATTTGCTTGACGAGAAGGTGCAGCTAAG	2	0.7058823529411765	9
NC_010995	4.51|2800823|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP047243	Trichormus variabilis 0441 plasmid unnamed1, complete sequence	CTGAAACATACCTTCGCGCCAAGCAAATGCTTTT	346876-346909	TAAAGCATTTGCTTGACGAGAAGGTGCAGCTAAG	2	0.7058823529411765	9
NC_010995	4.53|2800955|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	CTTCCGTGTTACCTGTCTGGTTGTAGTACCCGCT	1193765-1193798	TGCGGATGCTACAACCAGACAGGTAATTCATCGT	2	0.7352941176470589	10
NC_010995	4.55|2801087|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MN657118	Psychrobacter sp. strain ANT_P53 plasmid pA53P4, complete sequence	TTCTCTTGAAGTTAAAGACGCTGCTACAGATGCA	33378-33411	CTATCTTGAAGTTAAGGAAGCTGCTACTAAAGTG	2	0.7058823529411765	9
NC_010995	4.56|2801153|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	KR537871	Stenotrophomonas phage vB_SmaS-DLP_2, complete genome	CGAACAATGCGATACTTGTTGTTCTGTTAACATT	30158-30191	AATGTTAACAGAACAACAAGTATCGCATTGTTCG	0	1.0	0
NC_010995	4.56|2801153|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MG897800	Pseudomonas phage vB_PaeS_C1, complete genome	CGAACAATGCGATACTTGTTGTTCTGTTAACATT	9302-9335	CGAACAATGCGATACTTGTTGTTCTGTCAACATT	1	1.0	1
NC_010995	4.56|2801153|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	KM434185	Pseudomonas phage vB_Pae_PS9N, complete genome	CGAACAATGCGATACTTGTTGTTCTGTTAACATT	35914-35947	AATGTTAACGGAACAACAAGTATCGCATTGTTCG	1	1.0	1
NC_010995	4.56|2801153|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_017864	Pseudomonas phage vB_Pae-Kakheti25, complete genome	CGAACAATGCGATACTTGTTGTTCTGTTAACATT	30210-30243	AATGTTAACGGAACAACAAGTATCGCATTGTTCG	1	1.0	1
NC_010995	4.56|2801153|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	DQ163913	Bacteriophage PA73, complete genome	CGAACAATGCGATACTTGTTGTTCTGTTAACATT	30288-30321	AATGTTAACGGAACAACAAGTATCGCATTGTTCG	1	1.0	1
NC_010995	4.56|2801153|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	KR537872	Stenotrophomonas phage vB_SmaS-DLP_1, complete genome	CGAACAATGCGATACTTGTTGTTCTGTTAACATT	30279-30312	AATGTTAACGGAACAACAAGTATCGCATTGTTCG	1	1.0	1
NC_010995	4.56|2801153|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_007806	Pseudomonas phage 73, complete genome	CGAACAATGCGATACTTGTTGTTCTGTTAACATT	30288-30321	AATGTTAACGGAACAACAAGTATCGCATTGTTCG	1	1.0	1
NC_010995	4.57|2801219|35|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MN694020	Marine virus AFVG_250M542, complete genome	TAAGGCAAACAGCAGAAATTGATGGCCATAGTATT	803-837	CTTAAATGAAAGGAGAAATTGATGGACATAGTATT	2	0.7142857142857143	8
NC_010995	4.65|2801751|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP017294	Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence	CCGAGATTATCAGCGCACATGCTGAGGCCAGTCT	58602-58635	CCGAGATTATCAGCGCACATGCACAGGGAGTCCT	2	0.7941176470588235	7
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MK820641	Gordonia phage EnalisNailo, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	45221-45254	CCCCGGATGCGATCACTGCTACGCCGAGACGTTC	2	0.8235294117647058	6
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MK284520	Gordonia phage Lilas, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	46759-46792	CCCCGGATGCGATCACTGCTACGCCGAGACGTTC	2	0.8235294117647058	6
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MT771342	Gordonia phage Matteo, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	38397-38430	CCCCGGATGCGATCACTGCTACGCCGAGACGTTC	2	0.8235294117647058	6
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MK016492	Gordonia phage Bialota, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	45335-45368	CCCCGGATGCGATCACTGCTACGCCGAGACGTTC	2	0.8235294117647058	6
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MK433274	Gordonia phage Bradissa, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	45687-45720	CCCCGGATGCGATCACTGCTACGCCGAGACGTTC	2	0.8235294117647058	6
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NC_031097	Gordonia phage Zirinka, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	45323-45356	CCCCGGATGCGATCACTGCTACGCCGAGACGTTC	2	0.8235294117647058	6
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	NZ_CP010312	Geoalkalibacter subterraneus strain Red1 plasmid pGSUB1, complete sequence	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	132460-132493	CGCCGGCTGCGATCACTGCTACGCCGAGAGCCTG	2	0.7058823529411765	8
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	AP013564	Uncultured Mediterranean phage uvMED isolate uvMED-CGR-C5-MedDCM-OCT-S33-C6, *** SEQUENCING IN PROGRESS ***, 4 ordered pieces	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	12322-12355	TTGGCGTTGCCATCACTGCTAGGCAGAGTCAGCG	2	0.7058823529411765	10
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MT952844	Gordonia phage Bosnia, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	47627-47660	CGCCGGGTGCGATCACTGCTACGCGGAGACGTTC	2	0.7058823529411765	8
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	AP013528	Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7A-MedDCM-OCT-S41-C23	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	20684-20717	TTGGCGTTGCCATCACTGCTAGGCAGAGTCAGCG	2	0.7058823529411765	10
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MT723938	Gordonia phage Bunnybear, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	44050-44083	CGCCGGGTGCGATCACTGCTACGCGGAGACGTTC	2	0.7058823529411765	8
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	MG872834	Gordonia phage Confidence, complete genome	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	43235-43268	CGCCGGGTGCGATCACTGCTACGCGGAGACGTTC	2	0.7058823529411765	8
NC_010995	4.66|2801817|34|NC_010995|CRISPRCasFinder,CRT,PILER-CR	AP013982	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7-MedDCM-OCT-S44-C91, *** SEQUENCING IN PROGRESS ***	CATTGACTCTGCGTAGCAGTGATCGCATCCAGGG	11170-11203	CGCTGACTCTGCCTAGCAGTGATGGCAACGCCAA	2	0.7058823529411765	10
NC_010995	4.69|2802015|33|NC_010995|CRISPRCasFinder,CRT,PILER-CR	KT716399	Pseudomonas phage POR1, complete genome	TTGTAGGGCCATCGGCTGTTGGCCCGGCTGGCA	27820-27852	CGGCTGCGCCATCGGCGGTTGTCCCGGCTGGCC	2	0.7575757575757576	8
