The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	13047	23357	2112148	integrase,transposase	Streptococcus_phage(62.5%)	11	13278:13292	29829:29843
WP_000424684.1|13047_13653_-	Rha family transcriptional regulator	NA	A0A192Y918	Salmonella_phage	34.1	6.8e-18
13278:13292	attL	ATGATTTGATAGCTT	NA	NA	NA	NA
WP_014678319.1|13674_14052_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012677155.1|14244_15591_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	39.8	9.9e-78
WP_001241280.1|15834_16026_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001814778.1|16229_16946_+	helix-turn-helix domain-containing protein	NA	A0A1S5SFG5	Streptococcus_phage	63.0	2.6e-77
WP_000666926.1|16964_17633_+	zinc ribbon domain-containing protein	NA	A0A141DZS3	Streptococcus_phage	74.1	8.4e-78
WP_000222518.1|17771_18440_+	Fic family protein	NA	D7RWK9	Brochothrix_phage	24.6	9.2e-08
WP_000255647.1|18903_19362_-	hypothetical protein	NA	A0A1X9I5V5	Streptococcus_phage	46.0	5.6e-25
WP_000417039.1|20784_21090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000422980.1|21194_21755_+	multidrug DMT transporter	NA	A0A1W6JPJ7	Morganella_phage	56.1	4.6e-21
WP_000704676.1|22190_23357_+|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	51.5	2.0e-103
29829:29843	attR	AAGCTATCAAATCAT	NA	NA	NA	NA
>prophage 2
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	60384	71840	2112148		Synechococcus_phage(33.33%)	8	NA	NA
WP_000668293.1|60384_62538_+	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.0	1.0e-44
WP_000801629.1|62550_63900_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_078102921.1|64027_64777_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D8KNF0	Synechococcus_phage	39.2	1.4e-41
WP_000429436.1|64787_64922_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000361166.1|64978_68704_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.5	6.2e-37
WP_000220633.1|68796_70239_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.1	5.7e-55
WP_000182580.1|70275_71298_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	44.2	7.3e-65
WP_000717501.1|71294_71840_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	9.7e-24
>prophage 3
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	113247	154683	2112148	tRNA,transposase,bacteriocin	Streptococcus_phage(50.0%)	48	NA	NA
WP_012677166.1|113247_114594_+|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	4.5e-78
WP_001257240.1|115665_115863_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000808434.1|116099_117164_-	membrane protein	NA	NA	NA	NA	NA
WP_001229057.1|117226_118138_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_000198675.1|118130_118724_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000273854.1|118710_119037_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000744897.1|119175_120342_-	CynX/NimT family MFS transporter	NA	NA	NA	NA	NA
WP_000096202.1|120399_121557_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_001035700.1|121598_123449_+	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	30.5	7.6e-28
WP_000200898.1|123798_124431_-	HAD family hydrolase	NA	NA	NA	NA	NA
WP_000500038.1|124452_125325_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit alpha	NA	NA	NA	NA	NA
WP_000838912.1|125333_126005_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA	NA
WP_000836450.1|126246_126834_+	LysM peptidoglycan-binding domain-containing protein	NA	A0A288TY55	Enterococcus_phage	56.7	1.6e-27
WP_001189285.1|126885_127206_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000227119.1|127657_127906_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000723961.1|127960_130069_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571330.1|130065_130707_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	4.3e-23
WP_001038474.1|130913_131720_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_099516442.1|131685_132156_+	argininosuccinate synthase	NA	NA	NA	NA	NA
WP_001189278.1|132445_132766_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000424418.1|133524_133893_+|bacteriocin	SP_0115 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_014632394.1|133894_134101_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001268157.1|134292_135156_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000915345.1|135621_135960_+	peptidase C39	NA	NA	NA	NA	NA
WP_000074494.1|136056_136434_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000973716.1|136587_136800_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424467.1|137215_137578_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000356083.1|137558_137804_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001814711.1|137960_139019_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000792250.1|139334_140312_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000424474.1|140688_141063_+|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000511668.1|141069_141252_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000619753.1|141270_142173_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013193366.1|142195_142582_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000539711.1|142548_143307_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000680086.1|143785_143983_+	hypothetical protein	NA	NA	NA	NA	NA
WP_073077614.1|144381_144681_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	54.1	1.2e-15
WP_000058768.1|144699_144945_+	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	53.4	1.3e-15
WP_001035384.1|145230_147405_+	pneumococcal surface protein A	NA	NA	NA	NA	NA
WP_001282969.1|147805_148927_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_073077617.1|149040_149523_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220964.1|149532_151446_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_001809448.1|151577_151727_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000331983.1|151798_153478_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639589.1|153479_153713_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_000282479.1|153992_154208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_013315026.1|154339_154537_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000974047.1|154530_154683_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
>prophage 4
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	198095	208847	2112148	integrase	Streptococcus_phage(77.78%)	14	198074:198090	210739:210755
198074:198090	attL	TTTGCTCCCCTTTTTGC	NA	NA	NA	NA
WP_000704664.1|198095_199262_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	70.1	3.7e-153
WP_001233766.1|199346_200861_-	ATPase AAA	NA	NA	NA	NA	NA
WP_001107589.1|201021_201735_-	helix-turn-helix domain-containing protein	NA	Q708R9	Streptococcus_phage	51.9	2.0e-16
WP_000090006.1|201887_202118_+	helix-turn-helix transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	3.7e-09
WP_000424665.1|202133_202760_+	Rha family transcriptional regulator	NA	R9QNB1	Lactococcus_phage	40.8	2.1e-30
WP_000141100.1|203131_203584_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000174331.1|203580_203781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001003774.1|203782_203998_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000058832.1|203994_204336_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000492137.1|204328_204610_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	67.8	7.9e-30
WP_000158192.1|204744_205611_+	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	75.0	8.2e-126
WP_000434359.1|205663_207133_+	DNA primase	NA	Q9AZI5	Lactococcus_phage	35.0	2.3e-64
WP_000173130.1|207736_208267_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	48.7	2.8e-36
WP_000811078.1|208337_208847_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	53.9	5.8e-47
210739:210755	attR	TTTGCTCCCCTTTTTGC	NA	NA	NA	NA
>prophage 5
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	348795	402942	2112148	transposase,protease,holin	Streptococcus_phage(25.0%)	45	NA	NA
WP_001063396.1|348795_350901_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.6	1.0e-116
WP_000032550.1|351195_351678_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_000743620.1|351772_353257_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_001156769.1|353409_355017_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_033604964.1|355181_355349_+	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
WP_000091077.1|356436_357882_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	60.1	3.6e-134
WP_000565348.1|357883_358615_+	tyrosine-protein phosphatase CpsB	NA	NA	NA	NA	NA
WP_000664166.1|358623_359316_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	55.9	4.3e-61
WP_001142521.1|359325_360009_+	polysaccharide biosynthesis tyrosine autokinase CpsD	NA	A0A1X9I5D6	Streptococcus_phage	60.9	1.3e-70
WP_000343581.1|360024_361392_+	sugar transferase	NA	NA	NA	NA	NA
WP_001205625.1|361395_362139_+	WecB/TagA/CpsF family glycosyltransferase	NA	NA	NA	NA	NA
WP_001076786.1|362135_362960_+|holin	LPS cholinephosphotransferase	holin	A0A1V0SD50	Indivirus	38.7	1.8e-05
WP_000458863.1|362961_363840_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000120848.1|363840_365178_+	oligosaccharide repeat unit polymerase	NA	NA	NA	NA	NA
WP_001092842.1|365200_366622_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000723326.1|366685_367774_+	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A1V0SAG5	Catovirus	30.3	1.0e-27
WP_000676118.1|367812_368682_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	K7QKA7	Escherichia_phage	63.2	9.2e-101
WP_000131463.1|368682_369279_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	32.8	3.0e-10
WP_000141500.1|369288_370338_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	44.2	8.3e-72
WP_000600898.1|370403_371255_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.4	4.3e-26
WP_000842571.1|372723_374706_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001032472.1|375006_380310_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_001041857.1|380475_382635_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_000248773.1|382631_383228_-	Holliday junction resolvase RecU	NA	A0A1L2JY30	Aeribacillus_phage	33.9	1.5e-17
WP_000179553.1|383294_383822_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_000200644.1|383891_384233_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_000711398.1|384718_385876_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_000039290.1|385888_387283_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA	NA
WP_000158792.1|387358_388783_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	2.7e-41
WP_000518011.1|388794_389484_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000698035.1|389581_390544_+|holin	choline-binding protein CbpC	holin	NA	NA	NA	NA
WP_000771128.1|390562_391561_+|holin	choline-binding protein CbpJ	holin	NA	NA	NA	NA
WP_000765677.1|391678_392911_-	MFS transporter	NA	NA	NA	NA	NA
WP_001822134.1|392953_393541_-	lanthionine synthetase	NA	NA	NA	NA	NA
WP_001816235.1|393440_393779_-	lantibiotic-modifying protein	NA	NA	NA	NA	NA
WP_000196972.1|394441_394771_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000163329.1|394892_395771_+	mevalonate kinase	NA	NA	NA	NA	NA
WP_000373456.1|395752_396706_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_000562377.1|396692_397700_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_000210628.1|397683_398694_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_001224634.1|398771_399470_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_000743662.1|399466_400462_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000698433.1|400475_401108_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_075218746.1|401275_401587_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
WP_000754506.1|402027_402942_+|protease	serine protease	protease	NA	NA	NA	NA
>prophage 6
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	475180	536532	2112148	tRNA,transposase,bacteriocin	Streptococcus_phage(20.0%)	55	NA	NA
WP_001810089.1|475180_475351_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000628994.1|476004_477228_-	ROK family transcriptional regulator	NA	NA	NA	NA	NA
WP_073078459.1|477391_478717_+	PTS sugar transporter subunit IIC	NA	NA	NA	NA	NA
WP_023356947.1|478664_480605_+	DUF4838 domain-containing protein	NA	NA	NA	NA	NA
WP_000836781.1|480772_481117_+	PTS lactose/cellobiose transporter subunit IIA	NA	NA	NA	NA	NA
WP_000429402.1|481126_482539_+	6-phospho-beta-galactosidase	NA	NA	NA	NA	NA
WP_000359753.1|482607_484287_+	PTS transporter subunit EIIC	NA	NA	NA	NA	NA
WP_001809506.1|484412_485852_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000691685.1|485855_487205_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_001063601.1|487392_488241_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_000403169.1|488255_488804_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000693286.1|488810_489068_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000656522.1|489169_490852_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	3.4e-19
WP_001148103.1|490836_491667_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000181380.1|491859_492363_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000185835.1|492815_493379_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001842683.1|493368_494019_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000867296.1|494045_494435_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000333653.1|494439_494889_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001808720.1|495001_495604_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_000105242.1|495993_497601_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.0	8.9e-142
WP_000026631.1|498159_499791_-	Na/Pi cotransporter family protein	NA	NA	NA	NA	NA
WP_000795202.1|500079_505020_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_001096743.1|505109_506306_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000119900.1|506441_506969_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_000659547.1|507045_507402_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001122904.1|507438_508785_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001808898.1|508880_509000_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000410535.1|508964_509114_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001220748.1|509566_510847_+	restriction endonuclease subunit S	NA	A0A1V0SLK8	Klosneuvirus	25.6	8.1e-13
WP_000187223.1|510794_512360_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000029054.1|512359_513823_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_000229085.1|513835_516169_-	DEAD/DEAH box helicase	NA	A0A097BY72	Enterococcus_phage	28.9	2.0e-25
WP_013193390.1|516541_516742_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001088687.1|516776_517286_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000255769.1|517449_518484_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|518510_519035_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034662.1|519514_521338_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000115730.1|521350_521704_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001066299.1|521908_523045_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.0	1.2e-23
WP_001808905.1|523366_523561_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000777760.1|523722_524010_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001278301.1|524019_524430_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	31.6	3.4e-05
WP_000889923.1|524497_525229_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	9.0e-25
WP_000653752.1|525225_526275_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000132575.1|526442_526772_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001816270.1|527067_528414_-|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	3.4e-78
WP_000682122.1|528755_529094_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219126.1|529098_529836_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000275284.1|529848_531189_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_001816270.1|531428_532775_-|transposase	IS1380-like element ISSpn5 family transposase	transposase	A0A1X9I6F6	Streptococcus_phage	40.0	3.4e-78
WP_000358814.1|532941_533097_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069099.1|533153_534515_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_001093269.1|536058_536307_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000483697.1|536322_536532_+|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
>prophage 7
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	768416	775422	2112148		Streptococcus_phage(42.86%)	10	NA	NA
WP_000405832.1|768416_768911_+	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_001170347.1|768910_769441_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
WP_000889093.1|769434_769791_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001103449.1|769948_770749_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000590986.1|770748_771492_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	41.0	1.6e-29
WP_001206969.1|771557_771794_+	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000272311.1|771859_772771_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	2.9e-89
WP_000855734.1|772808_773537_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_001272941.1|773581_774193_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000930003.1|774705_775422_+	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	30.9	2.1e-26
>prophage 8
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	1199789	1210185	2112148		Streptococcus_phage(70.0%)	11	NA	NA
WP_001166874.1|1199789_1200668_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.7	1.7e-115
WP_000358228.1|1200670_1200988_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_000806706.1|1201027_1201918_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.4	1.4e-72
WP_000033363.1|1201914_1202553_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	67.6	2.2e-75
WP_000689709.1|1202772_1203570_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.6	2.7e-59
WP_000254686.1|1203573_1204836_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	64.5	2.5e-139
WP_001844793.1|1204845_1205976_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.1e-114
WP_000728257.1|1206055_1207939_-	MBL fold metallo-hydrolase	NA	Q332B9	Clostridium_botulinum_C_phage	23.7	9.5e-10
WP_000403195.1|1207941_1208829_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.0	1.3e-09
WP_000745389.1|1208818_1209280_-	signal peptidase II	NA	NA	NA	NA	NA
WP_001025704.1|1209276_1210185_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	3.1e-06
>prophage 9
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	1435014	1441773	2112148	protease	Streptococcus_phage(50.0%)	9	NA	NA
WP_000081004.1|1435014_1435983_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	99.2	1.8e-65
WP_000011306.1|1436016_1436928_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	99.7	1.5e-154
WP_001231086.1|1436924_1437902_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
WP_000163033.1|1437898_1438789_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	3.9e-06
WP_001140420.1|1438840_1439221_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422605.1|1439231_1439819_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_001839487.1|1439827_1441060_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.2	4.9e-132
WP_000442260.1|1441096_1441267_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162453.1|1441266_1441773_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	42.5	8.7e-27
>prophage 10
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	1696681	1704054	2112148		uncultured_Mediterranean_phage(33.33%)	10	NA	NA
WP_001814725.1|1696681_1697401_+	UDP-glucose 4-epimerase GalE	NA	A0A2K9L1R4	Tupanvirus	36.2	4.7e-34
WP_001108392.1|1697397_1697550_+	hypothetical protein	NA	NA	NA	NA	NA
WP_079199405.1|1697831_1698806_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	40.5	1.2e-56
WP_001193665.1|1698795_1699752_+	iron chelate uptake ABC transporter family permease subunit	NA	NA	NA	NA	NA
WP_000764303.1|1699748_1700501_+	ATP-binding cassette domain-containing protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.1	5.6e-14
WP_000858251.1|1700596_1701562_+	siderophore ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000821615.1|1701786_1702029_-	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	59.4	7.8e-18
WP_001222228.1|1702028_1702751_-	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
WP_000105310.1|1702737_1703307_-	segregation/condensation protein B	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	34.9	5.0e-15
WP_000351913.1|1703325_1704054_-	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	22.3	4.1e-09
>prophage 11
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	1785495	1812067	2112148	transposase,bacteriocin	Streptococcus_phage(92.0%)	31	NA	NA
WP_000420682.1|1785495_1785810_+	YdcP family protein	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
WP_000985015.1|1785825_1786212_+	YdcP family protein	NA	A0A1S5SF96	Streptococcus_phage	100.0	3.0e-64
WP_000813488.1|1786240_1787626_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
WP_000879507.1|1787628_1787781_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000398284.1|1787803_1789009_+	XRE family transcriptional regulator	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
WP_001009056.1|1789051_1789273_+	hypothetical protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
WP_000342539.1|1789389_1789887_+	antirestriction protein ArdA	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
WP_000506270.1|1789861_1790368_+	conjugal transfer protein	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
WP_000331160.1|1790351_1792799_+	ATP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
WP_012677156.1|1792801_1794979_+	membrane protein	NA	A0A1S5SF30	Streptococcus_phage	98.5	0.0e+00
WP_000769868.1|1794975_1795977_+	peptidase P60	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
WP_001224318.1|1795973_1796906_+	conjugal transfer protein	NA	A0A1S5SF22	Streptococcus_phage	99.4	3.1e-171
WP_012386611.1|1797180_1797267_+	tetracycline resistance determinant leader peptide	NA	NA	NA	NA	NA
WP_000691729.1|1797282_1799202_+	tetracycline resistance ribosomal protection protein Tet(M)	NA	A0A1S5SF82	Streptococcus_phage	97.3	0.0e+00
WP_001813542.1|1799565_1799811_+	hypothetical protein	NA	A0A1B0RXA7	Streptococcus_phage	98.8	2.6e-37
WP_000806926.1|1799807_1800143_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000567222.1|1800155_1800524_+	hypothetical protein	NA	A0A1B0RXA8	Streptococcus_phage	97.5	1.1e-58
WP_001072467.1|1800510_1800810_+	hypothetical protein	NA	A0A1B0RX98	Streptococcus_phage	96.0	1.8e-48
WP_000420313.1|1800927_1802391_-	ABC-F type ribosomal protection protein Msr(D)	NA	A0A1B0RXA0	Streptococcus_phage	97.3	3.7e-251
WP_000417519.1|1802510_1803728_-	macrolide efflux MFS transporter Mef(A)	NA	A0A2K5B2B5	Erysipelothrix_phage	90.6	5.1e-198
WP_000873143.1|1804113_1804284_-	hypothetical protein	NA	A0A1X9I6E4	Streptococcus_phage	98.2	3.7e-22
WP_001860868.1|1804805_1804997_+	conjugal transfer protein	NA	D0R0F6	Streptococcus_phage	69.4	5.4e-14
WP_001227347.1|1805056_1805410_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-58
WP_013670292.1|1805614_1805686_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000804885.1|1805914_1806337_+	sigma-70 family RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
WP_000857133.1|1806333_1806564_+	helix-turn-helix domain-containing protein	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
WP_001845478.1|1806789_1807041_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000814511.1|1807024_1807228_+	excisionase	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
WP_001291561.1|1807309_1808527_+|transposase	transposase	transposase	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
WP_000732395.1|1809417_1811433_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571425.1|1811434_1812067_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.9	2.8e-22
>prophage 12
NC_012469	Streptococcus pneumoniae Taiwan19F-14, complete genome	2112148	2090529	2099283	2112148		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510412.1|2090529_2091369_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	32.6	1.1e-15
WP_000835715.1|2091353_2092181_-	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.9	2.8e-22
WP_000712136.1|2092177_2092723_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_001844398.1|2092733_2093564_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170193.1|2093596_2094880_-	insulinase family protein	NA	A0A1E1EST3	Acanthamoeba_castellanii_mimivirus	29.5	7.1e-17
WP_000424257.1|2094876_2096127_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.1	6.0e-93
WP_000455903.1|2096285_2096654_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
WP_000266662.1|2096656_2097754_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073428.1|2097804_2099283_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
