The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	22832	31670	2120234	integrase	Streptococcus_phage(75.0%)	14	24892:24907	31145:31160
WP_000205044.1|22832_24119_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	37.1	2.7e-72
WP_000291870.1|24319_24787_+	nucleoside deaminase	NA	NA	NA	NA	NA
24892:24907	attL	TTGTGTGCTCTTTTTT	NA	NA	NA	NA
WP_001106362.1|24995_25694_-|integrase	site-specific integrase	integrase	A0A1S5SDQ9	Streptococcus_phage	100.0	6.0e-127
WP_001814135.1|25783_26137_-	hypothetical protein	NA	U4KJ82	Streptococcus_phage	97.3	4.5e-54
WP_000401841.1|26191_27262_-	endonuclease	NA	A0A1S5SAB0	Streptococcus_phage	97.8	2.9e-181
WP_000170931.1|27278_27659_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A1S5SBG5	Streptococcus_phage	98.4	1.7e-67
WP_000285962.1|27671_27935_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	100.0	1.2e-43
WP_000156419.1|27934_28168_-	hypothetical protein	NA	A0A1S5S8D5	Streptococcus_phage	96.1	8.9e-35
WP_000464160.1|28167_28536_-	helix-turn-helix transcriptional regulator	NA	A0A1S5SBE7	Streptococcus_phage	100.0	1.4e-63
WP_001112859.1|29107_29299_+	DNA-binding protein	NA	A0A141DZR9	Streptococcus_phage	100.0	3.0e-28
WP_001247549.1|29321_29525_+	hypothetical protein	NA	A0A141E1R6	Streptococcus_phage	95.5	1.3e-29
WP_000024181.1|29679_29847_-	YjzC family protein	NA	NA	NA	NA	NA
WP_001209433.1|30451_30631_-	hypothetical protein	NA	Q3BLW4	Phage_SK137	96.6	3.5e-23
WP_000701992.1|31226_31670_+	dUTP diphosphatase	NA	Q2WG49	Clostridium_botulinum_D_phage	47.3	2.1e-29
31145:31160	attR	TTGTGTGCTCTTTTTT	NA	NA	NA	NA
>prophage 2
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	116894	181508	2120234	bacteriocin,tRNA,protease	Staphylococcus_phage(30.0%)	60	NA	NA
WP_000227119.1|116894_117143_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_032495971.1|117197_119306_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000571039.1|119302_119944_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	2.5e-23
WP_001038471.1|120150_120957_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA	NA
WP_001107615.1|122199_123591_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_001268168.1|123879_124743_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_000915350.1|125208_127428_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	25.5	2.3e-39
WP_001096141.1|127420_127888_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000781020.1|127884_129237_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
WP_000424451.1|129381_129699_+	hypothetical protein	NA	NA	NA	NA	NA
WP_024475396.1|129704_130607_+	hypothetical protein	NA	NA	NA	NA	NA
WP_074186857.1|130629_130995_+	argininosuccinate lyase	NA	NA	NA	NA	NA
WP_078158507.1|130961_131720_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000680086.1|132198_132396_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001282972.1|136196_137318_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_077143887.1|137431_137914_+	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_000220953.1|137923_139837_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
WP_001809448.1|139968_140118_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000331980.1|140189_141869_-	ribonuclease J	NA	NA	NA	NA	NA
WP_000639577.1|141870_142104_-	DNA-dependent RNA polymerase auxiliary subunit epsilon family protein	NA	NA	NA	NA	NA
WP_001844323.1|142730_142928_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000977347.1|142921_143074_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
WP_000180803.1|143075_143261_-|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	bacteriocin	NA	NA	NA	NA
WP_000865708.1|143438_144122_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
WP_000569831.1|144118_144556_+	ribosomal protein S18-alanine N-acetyltransferase	NA	NA	NA	NA	NA
WP_000655047.1|144545_145556_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	NA	NA	NA	NA
WP_000375722.1|149370_150324_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000288029.1|150333_151950_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	36.0	3.0e-28
WP_001290270.1|152298_152727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_073506749.1|152732_153488_+	PIG-L family deacetylase	NA	NA	NA	NA	NA
WP_001017600.1|153500_154673_+	nucleotide sugar dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	43.2	8.7e-78
WP_000570720.1|155068_155932_+	MutR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000933464.1|156217_156418_+	peptide pheromone VP1	NA	NA	NA	NA	NA
WP_000720790.1|156484_157150_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000862430.1|157221_158448_+	MFS transporter	NA	NA	NA	NA	NA
WP_001141646.1|158900_159557_+	AzlC family ABC transporter permease	NA	NA	NA	NA	NA
WP_000253940.1|159546_159756_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000724936.1|159973_160804_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000694501.1|160957_161812_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000231826.1|161911_163285_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
WP_000085657.1|163277_164339_+	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.3	2.0e-28
WP_000444655.1|164340_165033_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000748391.1|165061_165631_-	MptD family putative ECF transporter S component	NA	NA	NA	NA	NA
WP_000532353.1|165765_166380_+	YesL family protein	NA	NA	NA	NA	NA
WP_000800579.1|166357_168028_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000278869.1|168039_169326_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_078131255.1|169329_169911_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_000849621.1|169988_170459_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	NA	NA	NA	NA
WP_000075789.1|170751_172014_-	divalent metal cation transporter	NA	NA	NA	NA	NA
WP_000745054.1|172323_172782_-	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
WP_000861968.1|172778_173219_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001810702.1|173458_173554_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000018156.1|173574_175524_+	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.3	4.5e-71
WP_001099502.1|175848_176316_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	52.6	3.7e-40
WP_000456639.1|176316_177522_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	3.5e-106
WP_000493841.1|177541_178177_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	46.9	9.9e-44
WP_001284096.1|178161_179262_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.2	3.8e-51
WP_000271493.1|179667_180261_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
WP_000166587.1|180270_180834_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
WP_000987424.1|180830_181508_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
>prophage 3
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	305485	364379	2120234	holin,protease,transposase	Streptococcus_phage(37.5%)	45	NA	NA
WP_001063433.1|305485_307591_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	37.6	5.8e-117
WP_000032551.1|307886_308369_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA	NA
WP_000743618.1|308463_309948_-	DUF1846 domain-containing protein	NA	NA	NA	NA	NA
WP_001156802.1|310100_311708_+	alpha-glucosidase	NA	NA	NA	NA	NA
WP_000091072.1|312773_314219_+	LCP family protein	NA	A0A1X9I5X1	Streptococcus_phage	59.9	4.0e-133
WP_000565364.1|314220_314952_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000664181.1|314960_315653_+	capsular polysaccharide biosynthesis protein CpsC	NA	A0A1X9I5E1	Streptococcus_phage	55.5	1.5e-61
WP_001142507.1|315662_316346_+	polysaccharide biosynthesis tyrosine autokinase CpsD	NA	A0A1X9I5D6	Streptococcus_phage	59.9	2.4e-72
WP_000358338.1|316361_317729_+	sugar transferase	NA	NA	NA	NA	NA
WP_000861662.1|317732_318182_+	UDP-N-acetylglucosamine--LPS N-acetylglucosamine transferase	NA	NA	NA	NA	NA
WP_000578434.1|318181_318685_+	multidrug MFS transporter	NA	NA	NA	NA	NA
WP_000702183.1|318674_319847_+	polysaccharide polymerase	NA	NA	NA	NA	NA
WP_000573793.1|319843_320863_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
WP_000389894.1|320877_321834_+	glycosyltransferase	NA	A0A1V0SAH6	Catovirus	39.3	1.6e-13
WP_000484012.1|321921_322770_+	capsular polysaccharide biosynthesis protein	NA	A0A0E3FM02	Synechococcus_phage	30.7	7.8e-12
WP_000066238.1|322762_324226_+	flippase	NA	NA	NA	NA	NA
WP_001834986.1|324266_324542_+	glycerophosphotransferase	NA	NA	NA	NA	NA
WP_000617752.1|324538_324856_+	glycerophosphotransferase	NA	NA	NA	NA	NA
WP_095708392.1|330379_331246_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_000842575.1|332915_334898_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001032453.1|335198_340502_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_001040022.1|340668_342828_-	PBP1A family penicillin-binding protein	NA	NA	NA	NA	NA
WP_000248787.1|342824_343421_-	Holliday junction resolvase RecU	NA	A0A1L2JY30	Aeribacillus_phage	33.9	8.7e-18
WP_000179549.1|343486_344014_+	DUF1273 domain-containing protein	NA	NA	NA	NA	NA
WP_001808467.1|344071_344413_+	cell division regulator GpsB	NA	NA	NA	NA	NA
WP_000711402.1|344898_346056_+	class I SAM-dependent RNA methyltransferase	NA	NA	NA	NA	NA
WP_000039253.1|346068_347463_+	mid-cell-anchored protein MapZ	NA	NA	NA	NA	NA
WP_000158781.1|347538_348963_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	29.6	1.6e-41
WP_000518016.1|348974_349664_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000771105.1|349761_350727_+|holin	choline-binding protein CbpC	holin	NA	NA	NA	NA
WP_000771134.1|350745_351744_+|holin	choline-binding protein CbpJ	holin	NA	NA	NA	NA
WP_000765664.1|351861_353094_-	MFS transporter	NA	NA	NA	NA	NA
WP_074017684.1|353136_354099_-	lanthionine synthetase	NA	NA	NA	NA	NA
WP_078152384.1|354739_354952_+|transposase	transposase	transposase	NA	NA	NA	NA
WP_000163319.1|355073_355952_+	mevalonate kinase	NA	NA	NA	NA	NA
WP_000373459.1|355933_356887_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
WP_000562410.1|356873_357881_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
WP_000210617.1|357864_358875_+	type 2 isopentenyl-diphosphate Delta-isomerase	NA	NA	NA	NA	NA
WP_001224637.1|358951_359650_+	cell wall-active antibiotics response protein	NA	NA	NA	NA	NA
WP_000743666.1|359646_360642_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000698432.1|360655_361288_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001811283.1|361288_361393_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000754502.1|362196_362436_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001100146.1|362516_363338_+|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
WP_000771080.1|363356_364379_+|holin	choline-binding protein CbpF	holin	NA	NA	NA	NA
>prophage 4
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	420925	481760	2120234	tRNA,bacteriocin,transposase	Klosneuvirus(18.18%)	55	NA	NA
WP_012677040.1|420925_421897_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
WP_000280773.1|422151_422997_+	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
WP_000904563.1|423143_424205_-	DNA polymerase IV	NA	NA	NA	NA	NA
WP_000260643.1|424598_426923_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	32.9	7.9e-115
WP_001812735.1|427289_427508_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000384133.1|427834_428119_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001809505.1|428730_428901_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_074186948.1|429660_429918_+	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
WP_001043417.1|430042_431482_-	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000691685.1|431485_432835_-	Trk system potassium transporter TrkA	NA	NA	NA	NA	NA
WP_001063601.1|433022_433871_+	S-adenosyl-l-methionine hydroxide adenosyltransferase family protein	NA	NA	NA	NA	NA
WP_000403162.1|433885_434434_+	ECF-type riboflavin transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_000693208.1|434440_434653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000656549.1|434754_436437_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.4	7.7e-19
WP_001148103.1|436421_437252_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
WP_000181373.1|437444_437948_+|tRNA	tRNA (cytidine(34)-2'-O)-methyltransferase	tRNA	NA	NA	NA	NA
WP_000185829.1|438400_438964_+	ECF transporter S component	NA	NA	NA	NA	NA
WP_001826724.1|438953_439604_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
WP_000867297.1|439631_440021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000333647.1|440025_440475_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_001808720.1|440587_441190_+	DNA-directed RNA polymerase subunit delta	NA	NA	NA	NA	NA
WP_000105234.1|441579_443187_+	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	47.0	1.5e-141
WP_000795167.1|445668_450579_+	YSIRK-type signal peptide-containing protein	NA	NA	NA	NA	NA
WP_001096743.1|450668_451865_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
WP_000119900.1|452000_452528_+	aromatic acid exporter family protein	NA	NA	NA	NA	NA
WP_000659553.1|452604_452961_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
WP_001122904.1|452997_454344_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
WP_001808898.1|454439_454559_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000410533.1|454523_454673_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001220766.1|455124_456402_+	restriction endonuclease subunit S	NA	A0A1V0SKS6	Klosneuvirus	29.2	6.9e-12
WP_000240090.1|456349_456958_-	type I restriction endonuclease	NA	A0A1V0SLK8	Klosneuvirus	30.1	3.9e-13
WP_000651177.1|456968_457766_-	tyrosine-type DNA invertase PsrA	NA	A0A0H4TI16	Erysipelothrix_phage	28.7	1.3e-21
WP_000187234.1|457822_459391_-	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000029036.1|459390_460854_-	SAM-dependent DNA methyltransferase	NA	NA	NA	NA	NA
WP_000229084.1|460866_463200_-	DEAD/DEAH box helicase	NA	A0A097BY72	Enterococcus_phage	26.3	5.8e-25
WP_001242576.1|463572_463773_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001088694.1|463807_464317_+	DUF2812 domain-containing protein	NA	NA	NA	NA	NA
WP_000255770.1|464480_465515_+	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
WP_000046031.1|465541_466066_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
WP_000034665.1|466545_468369_+	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	47.2	1.3e-133
WP_000114427.1|468370_468727_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001066295.1|469128_470265_+	molecular chaperone DnaJ	NA	E3T4P7	Cafeteria_roenbergensis_virus	31.3	2.4e-24
WP_000777753.1|471067_471355_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001278301.1|471364_471775_-	HIT family protein	NA	B5LJ12	Mycobacterium_phage	31.6	3.4e-05
WP_000889923.1|471842_472574_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.6	9.0e-25
WP_000653774.1|472570_473620_+	multidrug ABC transporter permease	NA	NA	NA	NA	NA
WP_000132572.1|473787_474117_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000876675.1|474392_474731_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001219120.1|474735_475473_+	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001017642.1|475486_476827_+	sensor histidine kinase	NA	NA	NA	NA	NA
WP_000358815.1|476897_477026_-	quorum-sensing system pheromone BlpC	NA	NA	NA	NA	NA
WP_001069060.1|477082_478444_-|bacteriocin	bacteriocin secretion accessory protein	bacteriocin	NA	NA	NA	NA
WP_001093256.1|480893_481148_+|bacteriocin	two-peptide bacteriocin subunit BlpM	bacteriocin	NA	NA	NA	NA
WP_001099490.1|481163_481367_+|bacteriocin	two-peptide bacteriocin subunit BlpN	bacteriocin	NA	NA	NA	NA
WP_001809846.1|481610_481760_+|bacteriocin	bacteriocin-like peptide BlpO	bacteriocin	NA	NA	NA	NA
>prophage 5
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	787403	847912	2120234	tRNA,bacteriocin,protease,transposase,integrase	Streptococcus_phage(45.0%)	54	791009:791053	842739:842783
WP_001200062.1|787403_788618_+|tRNA	tRNA 4-thiouridine(8) synthase ThiI	tRNA	NA	NA	NA	NA
WP_001076703.1|788752_789577_+	esterase family protein	NA	NA	NA	NA	NA
WP_001108634.1|789589_790756_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
791009:791053	attL	ATACTCAATGAAAATCAAAGAGCAAACTAGGAAGCTAGCCGCAGG	NA	NA	NA	NA
WP_000627748.1|791263_792757_+	SAM-dependent DNA methyltransferase	NA	A0A2H4UVB0	Bodo_saltans_virus	31.8	3.0e-27
WP_000756174.1|792769_793786_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000756206.1|793782_794370_+|tRNA	tRNA CCA-pyrophosphorylase	tRNA	NA	NA	NA	NA
WP_000260605.1|794429_794666_+	AbrB family transcriptional regulator	NA	NA	NA	NA	NA
WP_000158366.1|794662_795076_+	type II toxin-antitoxin system death-on-curing family toxin	NA	NA	NA	NA	NA
WP_000444455.1|795193_796159_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4JAA2	uncultured_Caudovirales_phage	29.6	1.4e-33
WP_000466656.1|796181_796763_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
WP_000526323.1|796792_800143_+	DEAD/DEAH box helicase	NA	A0A2H4P9W3	Gordonia_phage	24.8	3.1e-11
WP_001042995.1|800648_801119_-	arginine repressor	NA	NA	NA	NA	NA
WP_001212037.1|801135_803409_-	Xaa-Pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
WP_078139987.1|803728_806857_+	DNA polymerase III subunit alpha	NA	A0A291AWR1	Streptomyces_phage	32.4	3.8e-112
WP_000820852.1|806939_807947_+	ATP-dependent 6-phosphofructokinase	NA	NA	NA	NA	NA
WP_001042809.1|808005_809511_+	pyruvate kinase	NA	NA	NA	NA	NA
WP_000536835.1|810628_810883_-	phage repressor protein	NA	B3GVX0	Streptococcus_phage	61.2	3.3e-19
WP_157723784.1|811326_812190_+	DUF4300 family protein	NA	NA	NA	NA	NA
WP_000617849.1|813984_814800_-	TIGR03943 family protein	NA	NA	NA	NA	NA
WP_000123613.1|814796_815702_-	permease	NA	NA	NA	NA	NA
WP_000268689.1|815702_815834_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000359154.1|816248_818378_+	RNA-binding transcriptional accessory protein	NA	NA	NA	NA	NA
WP_000778590.1|818364_818814_+	SprT family protein	NA	NA	NA	NA	NA
WP_078135809.1|818842_819145_+	PspC domain-containing protein	NA	NA	NA	NA	NA
WP_000680766.1|819498_819690_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000173358.1|820117_820876_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	7.7e-27
WP_000489404.1|820877_822866_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_078153154.1|822907_823549_-	VIT family protein	NA	NA	NA	NA	NA
WP_001153913.1|823577_824453_-|transposase	IS30 family transposase	transposase	H7BWC8	unidentified_phage	31.3	4.0e-27
WP_073176984.1|824685_824868_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000661009.1|825159_826635_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_078133414.1|826600_827191_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000366713.1|827571_828432_+	polyamine aminopropyltransferase	NA	NA	NA	NA	NA
WP_000088782.1|828428_829688_+	saccharopine dehydrogenase family protein	NA	NA	NA	NA	NA
WP_000764365.1|829687_830815_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
WP_000969445.1|830811_831897_+	agmatine deiminase	NA	M1HES8	Acanthocystis_turfacea_Chlorella_virus	47.5	1.6e-89
WP_001246755.1|831906_832782_+	N-carbamoylputrescine amidase	NA	M1H5W0	Paramecium_bursaria_Chlorella_virus	50.0	1.1e-77
WP_000593565.1|832962_833772_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000602451.1|834043_834265_+|bacteriocin	SP_0924 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
WP_000745370.1|834318_834990_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_001025709.1|835231_836140_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	3.1e-06
WP_000745389.1|836136_836598_+	signal peptidase II	NA	NA	NA	NA	NA
WP_000403199.1|836587_837475_+	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	28.0	1.7e-09
WP_000728253.1|837477_839361_+	MBL fold metallo-hydrolase	NA	Q332B9	Clostridium_botulinum_C_phage	22.9	1.2e-09
WP_075218898.1|839440_840571_+	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.1e-114
WP_000254683.1|840580_841843_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	64.8	1.7e-140
WP_000689705.1|841846_842644_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.2	6.1e-59
WP_000033362.1|842863_843502_+	dTMP kinase	NA	M1PSC7	Streptococcus_phage	68.1	9.8e-76
842739:842783	attR	CCTGCGGCTAGCTTCCTAGTTTGCTCTTTGATTTTCATTGAGTAT	NA	NA	NA	NA
WP_000806710.1|843498_844389_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.4	6.4e-73
WP_000358228.1|844428_844746_+	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
WP_001166894.1|844748_845618_+	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.4	2.5e-114
WP_001261452.1|845844_846363_+	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
WP_000345255.1|846471_847119_+	replication initiator protein A	NA	A0A2P0VK56	Streptococcus_phage	34.6	2.4e-13
WP_088778987.1|847107_847912_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 6
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	1110567	1177306	2120234	holin,protease,transposase	Indivirus(16.67%)	60	NA	NA
WP_000792118.1|1110567_1111521_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_000726258.1|1111693_1113859_+	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_001096313.1|1113858_1114599_+	amino acid ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	27.3	2.8e-18
WP_000096143.1|1114747_1116235_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	32.8	4.2e-69
WP_000522319.1|1116280_1117558_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
WP_000763449.1|1117561_1118380_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000153032.1|1118379_1119174_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000280934.1|1119170_1122710_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
WP_000661498.1|1122700_1123399_-	ribonuclease III	NA	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	33.8	3.9e-25
WP_000931180.1|1123716_1124703_-	GMP reductase	NA	G3MBI2	Bacillus_virus	72.2	1.8e-137
WP_078163049.1|1124878_1126222_-	McrC family protein	NA	NA	NA	NA	NA
WP_078163048.1|1126181_1128116_-	McrB family protein	NA	K4I1H4	Acidithiobacillus_phage	33.7	1.8e-16
WP_000929151.1|1129063_1129423_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_000762432.1|1129426_1129696_-	DUF1294 domain-containing protein	NA	NA	NA	NA	NA
WP_001074723.1|1129692_1130730_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_000461585.1|1131854_1132511_-	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA	NA
WP_000638779.1|1132554_1133187_-	copper homeostasis protein CutC	NA	NA	NA	NA	NA
WP_001237217.1|1133279_1133639_-	YbaN family protein	NA	NA	NA	NA	NA
WP_000179648.1|1133744_1135832_-	type I DNA topoisomerase	NA	A0A1V0SCS0	Indivirus	37.5	1.5e-104
WP_001812957.1|1135998_1137042_-	TIGR00341 family protein	NA	NA	NA	NA	NA
WP_061542750.1|1137561_1137747_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000705306.1|1137930_1138779_-	DNA-protecting protein DprA	NA	S6BFL3	Thermus_phage	39.5	4.2e-34
WP_000643971.1|1138874_1139564_-	NTP transferase domain-containing protein	NA	A0A127AW70	Bacillus_phage	45.0	3.4e-05
WP_000837609.1|1139575_1140454_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000411210.1|1140443_1141313_-	phosphotransferase family protein	NA	NA	NA	NA	NA
WP_000609894.1|1141329_1142352_-	alcohol dehydrogenase catalytic domain-containing protein	NA	NA	NA	NA	NA
WP_000638502.1|1142356_1143064_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_000835905.1|1143399_1144887_+	type IV teichoic acid flippase TacF	NA	NA	NA	NA	NA
WP_000811991.1|1144896_1145700_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	27.1	4.0e-10
WP_001199649.1|1145701_1146511_+|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	30.3	9.1e-10
WP_001126425.1|1146785_1149962_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
WP_000166701.1|1150273_1151353_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.9	6.3e-59
WP_001293838.1|1151402_1152326_-	aspartate carbamoyltransferase	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	31.7	5.1e-25
WP_000850024.1|1152344_1152866_-	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
WP_000244451.1|1153076_1153706_-	endonuclease III	NA	NA	NA	NA	NA
WP_000773231.1|1153705_1154248_-	DUF177 domain-containing protein	NA	NA	NA	NA	NA
WP_001155337.1|1154981_1155935_+|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	34.9	8.1e-34
WP_001861318.1|1156216_1157776_+	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A1B0RXA0	Streptococcus_phage	27.5	9.3e-11
WP_000895733.1|1157924_1158824_-|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
WP_000219823.1|1158825_1159386_-	LemA family protein	NA	NA	NA	NA	NA
WP_000801931.1|1159479_1160193_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
WP_000534483.1|1160508_1161828_+	uracil transporter	NA	Q9KX94	Enterobacteria_phage	35.3	2.4e-60
WP_000863651.1|1162022_1163594_-	signal recognition particle protein	NA	NA	NA	NA	NA
WP_000402071.1|1163605_1163938_-	putative DNA-binding protein	NA	NA	NA	NA	NA
WP_001813593.1|1164028_1164406_-	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
WP_001003498.1|1164477_1165782_+	HD domain-containing protein	NA	E3T4P8	Cafeteria_roenbergensis_virus	30.2	1.7e-26
WP_000023526.1|1165794_1166601_+	sugar-phosphatase	NA	NA	NA	NA	NA
WP_001008997.1|1166643_1167642_+	SAP domain-containing protein	NA	NA	NA	NA	NA
WP_001068669.1|1167920_1168268_-	50S ribosomal protein L19	NA	NA	NA	NA	NA
WP_000237416.1|1168386_1168716_-	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	37.8	6.3e-10
WP_000712098.1|1168709_1169084_-	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
WP_000362435.1|1169080_1169347_-	chorismate mutase	NA	NA	NA	NA	NA
WP_001162128.1|1169462_1169906_-	flavodoxin	NA	NA	NA	NA	NA
WP_000401779.1|1170009_1170945_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
WP_000710764.1|1171040_1171283_+	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
WP_000028150.1|1171339_1171558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000199560.1|1172642_1173989_+	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
WP_000711943.1|1174494_1174665_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001811052.1|1176169_1176328_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078064062.1|1176922_1177306_-|transposase	transposase	transposase	A0A218MNE7	uncultured_virus	26.0	8.4e-06
>prophage 7
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	1282617	1326212	2120234	tRNA,holin,transposase	Streptococcus_phage(20.0%)	51	NA	NA
WP_001814267.1|1282617_1282830_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_010976569.1|1282838_1283207_-|transposase	transposase	transposase	NA	NA	NA	NA
WP_000691850.1|1283130_1283325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000152348.1|1283494_1283845_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA	NA
WP_000065720.1|1284314_1285877_-	glutamine-hydrolyzing GMP synthase	NA	A0A1V0SH76	Hokovirus	32.8	4.9e-20
WP_000936188.1|1286018_1286717_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000071674.1|1286759_1287656_-	EamA family transporter	NA	NA	NA	NA	NA
WP_000872215.1|1287664_1288600_-	serine hydrolase	NA	NA	NA	NA	NA
WP_001102210.1|1288596_1289322_-	proteinase	NA	NA	NA	NA	NA
WP_000290657.1|1289405_1290041_-|holin	1-alkyl-2-acetylglycerophosphocholine esterase	holin	A0A2K9L661	Tupanvirus	28.7	8.7e-08
WP_000972931.1|1290042_1290870_-	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA	NA
WP_000526284.1|1290891_1291227_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000930000.1|1291227_1291944_-	CapA family protein	NA	A0A0N9SJ77	Staphylococcus_phage	30.7	3.0e-25
WP_001272961.1|1292456_1293068_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
WP_000855736.1|1293112_1293841_+	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
WP_000272304.1|1293879_1294791_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.5	1.0e-89
WP_001206969.1|1294856_1295093_-	DUF4059 family protein	NA	NA	NA	NA	NA
WP_000590986.1|1295158_1295902_-	amino acid ABC transporter ATP-binding protein	NA	W5SAS9	Pithovirus	27.4	1.6e-13
WP_001103449.1|1295901_1296702_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
WP_000889093.1|1296859_1297216_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
WP_001170346.1|1297228_1297741_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	55.6	1.3e-46
WP_000405832.1|1297740_1298235_-	GNAT family N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	52.1	1.9e-42
WP_000858730.1|1298369_1298816_+	DUF1836 domain-containing protein	NA	NA	NA	NA	NA
WP_001097986.1|1298812_1299460_+	hemolysin III family protein	NA	NA	NA	NA	NA
WP_000689945.1|1299480_1300062_-	pyridoxal 5'-phosphate synthase glutaminase subunit PdxT	NA	NA	NA	NA	NA
WP_000138517.1|1300062_1300938_-	pyridoxal 5'-phosphate synthase lyase subunit PdxS	NA	NA	NA	NA	NA
WP_000036793.1|1301089_1302469_-	NADH oxidase	NA	NA	NA	NA	NA
WP_000175407.1|1302762_1303686_+	FAD:protein FMN transferase	NA	NA	NA	NA	NA
WP_000915958.1|1303745_1304351_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	1.0e-53
WP_000673691.1|1304369_1305614_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	1.7e-55
WP_000371287.1|1305836_1306094_-	DUF896 family protein	NA	NA	NA	NA	NA
WP_000164779.1|1306135_1308172_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
WP_000038750.1|1308431_1309349_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
WP_000369575.1|1309367_1310129_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001099688.1|1310401_1311244_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	39.8	2.9e-51
WP_013193417.1|1311358_1312750_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
WP_001811065.1|1312984_1313362_-	hypothetical protein	NA	NA	NA	NA	NA
WP_078101603.1|1313492_1314554_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
WP_000850589.1|1314550_1315633_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	31.0	6.8e-37
WP_153232064.1|1316972_1317122_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001040724.1|1318603_1319800_-	elongation factor Tu	NA	A0A076FFS6	Aureococcus_anophage	29.6	7.3e-32
WP_012677032.1|1319963_1320917_-|transposase	IS30-like element ISSpn8 family transposase	transposase	H7BWC8	unidentified_phage	34.9	3.7e-34
WP_000348125.1|1321966_1322836_-	aquaporin family protein	NA	NA	NA	NA	NA
WP_000248980.1|1323059_1323581_-	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
WP_000818861.1|1323538_1324147_-	MucBP domain-containing protein	NA	NA	NA	NA	NA
WP_001021430.1|1324134_1324644_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000935666.1|1324754_1325009_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000284543.1|1325002_1325245_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000200306.1|1325366_1325900_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
WP_001844799.1|1325886_1326102_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001811209.1|1326068_1326212_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 8
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	1399511	1406265	2120234	protease	Streptococcus_phage(50.0%)	9	NA	NA
WP_000080998.1|1399511_1400480_+	NAD(P)/FAD-dependent oxidoreductase	NA	Q9JRK7	Streptococcus_phage	100.0	2.8e-66
WP_000011276.1|1400513_1401425_-	DNA-binding protein WhiA	NA	Q7AWZ3	Streptococcus_phage	100.0	2.3e-155
WP_001231086.1|1401421_1402399_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	100.0	1.2e-184
WP_000163026.1|1402395_1403286_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.8	6.7e-06
WP_001140412.1|1403337_1403718_-	RidA family protein	NA	NA	NA	NA	NA
WP_000422597.1|1403728_1404316_-	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
WP_000106346.1|1404324_1405557_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	59.0	4.2e-131
WP_000442257.1|1405588_1405759_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000162448.1|1405758_1406265_-	dihydrofolate reductase	NA	G3MBI7	Bacillus_virus	43.1	3.0e-27
>prophage 9
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	1742846	1784816	2120234	portal,capsid,terminase,holin,integrase,tail,head	Streptococcus_phage(98.31%)	61	1777478:1777493	1791060:1791075
WP_000031573.1|1742846_1744469_-	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.1	2.3e-153
WP_000917299.1|1744484_1744769_-	co-chaperone GroES	NA	NA	NA	NA	NA
WP_000580362.1|1744924_1745302_-	single-stranded DNA-binding protein	NA	A1EAD1	Streptococcus_phage	44.4	6.1e-25
WP_000698517.1|1745328_1745571_-	hypothetical protein	NA	A0A126GH17	Streptococcus_phage	80.0	5.2e-30
WP_000350534.1|1745802_1746759_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A1S5SD25	Streptococcus_phage	97.5	3.1e-158
WP_001186214.1|1746764_1747094_-|holin	phage holin	holin	A0A1S5SCF2	Streptococcus_phage	100.0	7.3e-43
WP_001810279.1|1747097_1747397_-	hypothetical protein	NA	A0A1S5SC89	Streptococcus_phage	100.0	1.4e-45
WP_000852252.1|1747406_1747757_-	hypothetical protein	NA	E8ZD23	Streptococcus_phage	100.0	6.2e-64
WP_001019662.1|1747759_1747963_-	hypothetical protein	NA	A0A1S5S9U6	Streptococcus_phage	98.5	1.9e-25
WP_001063633.1|1747943_1748060_-	hypothetical protein	NA	A0A1S5SCF0	Streptococcus_phage	100.0	4.0e-12
WP_157723785.1|1748056_1754113_-	peptidase S74	NA	A0A1S5S8Y8	Streptococcus_phage	83.2	0.0e+00
WP_000068032.1|1754387_1754738_-	hypothetical protein	NA	A0A141E1M8	Streptococcus_phage	100.0	2.3e-63
WP_000212179.1|1754746_1758400_-	hypothetical protein	NA	A0A1S5SBF2	Streptococcus_phage	99.3	0.0e+00
WP_000478015.1|1758386_1758737_-	hypothetical protein	NA	A0A1S5S814	Streptococcus_phage	99.1	4.7e-56
WP_001185634.1|1758775_1759156_-	hypothetical protein	NA	A0A1S5S849	Streptococcus_phage	100.0	1.2e-65
WP_000880674.1|1759160_1759574_-|tail	tail protein	tail	A0A1S5SF66	Streptococcus_phage	100.0	1.9e-72
WP_000608235.1|1759576_1759945_-	hypothetical protein	NA	A0A1S5SFB8	Streptococcus_phage	100.0	1.2e-65
WP_000015942.1|1759941_1760457_-	HK97 gp10 family phage protein	NA	A0A1S5S809	Streptococcus_phage	100.0	2.7e-92
WP_001251083.1|1760431_1760734_-	hypothetical protein	NA	A0A1S5S812	Streptococcus_phage	100.0	2.4e-48
WP_000021220.1|1760750_1761062_-|head,tail	phage head-tail adapter protein	head,tail	A0A1S5SES7	Streptococcus_phage	100.0	2.5e-48
WP_000669348.1|1761063_1761252_-	hypothetical protein	NA	A0A141DZN7	Streptococcus_phage	100.0	1.4e-27
WP_000054934.1|1761241_1761424_-	hypothetical protein	NA	X2KSZ5	Streptococcus_phage	100.0	1.2e-23
WP_000123890.1|1761435_1762281_-|capsid	N4-gp56 family major capsid protein	capsid	X2KPH5	Streptococcus_phage	100.0	5.9e-153
WP_001288021.1|1762286_1762871_-	DUF4355 domain-containing protein	NA	X2KU26	Streptococcus_phage	91.8	8.1e-77
WP_000890163.1|1763087_1763339_-	hypothetical protein	NA	A0A1S5SBY0	Streptococcus_phage	100.0	8.9e-41
WP_000877357.1|1763340_1763586_-	hypothetical protein	NA	A0A141E1X7	Streptococcus_phage	100.0	5.5e-43
WP_000565276.1|1763628_1764042_-	HD domain-containing protein	NA	A0A060QNR4	Streptococcus_phage	100.0	1.1e-67
WP_000651747.1|1764038_1764248_-	hypothetical protein	NA	A0A141E1P2	Streptococcus_phage	100.0	2.6e-33
WP_000356290.1|1764249_1765833_-|head	head morphogenesis protein	head	A0A1S5S801	Streptococcus_phage	100.0	4.2e-301
WP_000285401.1|1765795_1767265_-|portal	phage portal protein	portal	A0A126GGN2	Streptococcus_phage	100.0	4.6e-278
WP_000084426.1|1767276_1768575_-|terminase	PBSX family phage terminase large subunit	terminase	A0A1S5SIN3	Streptococcus_phage	100.0	5.0e-260
WP_001859583.1|1768552_1768993_-|terminase	terminase small subunit	terminase	A0A141E1Y3	Streptococcus_phage	99.3	1.3e-74
WP_001030241.1|1769460_1769865_-	DUF1492 domain-containing protein	NA	X2L088	Streptococcus_phage	100.0	3.1e-67
WP_001247150.1|1769937_1770309_-	hypothetical protein	NA	X2KSY6	Streptococcus_phage	100.0	4.0e-53
WP_000188937.1|1770305_1770743_-	hypothetical protein	NA	A0A1C9LX52	Streptococcus_phage	100.0	8.2e-82
WP_000140868.1|1770754_1771177_-	hypothetical protein	NA	E8ZD50	Streptococcus_phage	100.0	2.8e-79
WP_000819325.1|1771173_1771434_-	DUF1372 family protein	NA	Q708P4	Streptococcus_phage	95.2	4.6e-40
WP_001041158.1|1771591_1772284_-	DUF1642 domain-containing protein	NA	A0A1S5S9F4	Streptococcus_phage	97.8	6.8e-131
WP_041172735.1|1772285_1772600_-	hypothetical protein	NA	A0A1S5SBL6	Streptococcus_phage	99.0	1.1e-56
WP_000796349.1|1772627_1772810_-	hypothetical protein	NA	A0A141E1B5	Streptococcus_phage	100.0	9.1e-27
WP_000779143.1|1772825_1773257_-	RusA family crossover junction endodeoxyribonuclease	NA	E8ZD55	Streptococcus_phage	100.0	2.1e-77
WP_000401829.1|1773253_1773652_-	hypothetical protein	NA	E8ZD56	Streptococcus_phage	99.1	3.6e-52
WP_000609561.1|1773664_1774081_-	single-stranded DNA-binding protein	NA	E8ZDH2	Streptococcus_phage	100.0	3.0e-73
WP_000598346.1|1774175_1774511_-	sporulation protein Cse60	NA	A0A1S5SBY6	Streptococcus_phage	100.0	2.0e-59
WP_029743260.1|1774503_1774827_-	hypothetical protein	NA	E8ZDH5	Streptococcus_phage	100.0	6.1e-58
WP_001157032.1|1774994_1776059_-	DUF1351 domain-containing protein	NA	A0A1S5SGI0	Streptococcus_phage	98.9	4.3e-193
WP_000184003.1|1776068_1776887_-	phage recombination protein Bet	NA	A0A1S5SD57	Streptococcus_phage	97.8	2.4e-151
WP_000471459.1|1777156_1777417_-	hypothetical protein	NA	A0A141E200	Streptococcus_phage	100.0	5.6e-38
WP_000275523.1|1777429_1777684_-	hypothetical protein	NA	A0A060QS59	Streptococcus_phage	100.0	2.3e-44
1777478:1777493	attL	TTTTTCATTTTGATAA	NA	NA	NA	NA
WP_000771950.1|1777684_1777906_-	hypothetical protein	NA	A0A060QSU9	Streptococcus_phage	95.9	3.7e-30
WP_001056933.1|1778060_1778858_-	hypothetical protein	NA	A0A141E1C9	Streptococcus_phage	100.0	1.4e-148
WP_000517704.1|1779184_1779409_+	DUF2188 domain-containing protein	NA	E8ZD70	Streptococcus_phage	100.0	1.0e-35
WP_001247797.1|1779405_1779588_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000261154.1|1779772_1780051_-	HTH domain-containing protein	NA	A0A060QMU7	Streptococcus_phage	100.0	1.2e-43
WP_001157069.1|1780217_1780454_-	hypothetical protein	NA	A0A141E1R7	Streptococcus_phage	100.0	1.7e-33
WP_000167802.1|1780645_1780936_-	hypothetical protein	NA	A0A1S5SFE0	Streptococcus_phage	100.0	3.0e-48
WP_001058908.1|1781134_1781584_+	hypothetical protein	NA	A0A141E206	Streptococcus_phage	100.0	3.7e-45
WP_001094380.1|1781816_1782092_-	hypothetical protein	NA	A0A141E1R9	Streptococcus_phage	100.0	7.7e-46
WP_001023158.1|1782252_1783005_+	helix-turn-helix domain-containing protein	NA	A0A141E1S0	Streptococcus_phage	100.0	1.5e-136
WP_000064302.1|1783006_1783207_+	hypothetical protein	NA	A0A1S5SFF2	Streptococcus_phage	100.0	7.1e-33
WP_000633503.1|1783388_1784816_+|integrase	integrase	integrase	A0A141E1S1	Streptococcus_phage	52.3	7.7e-129
1791060:1791075	attR	TTTTTCATTTTGATAA	NA	NA	NA	NA
>prophage 10
NC_012466	Streptococcus pneumoniae JJA, complete genome	2120234	2098087	2106841	2120234		Streptococcus_phage(33.33%)	9	NA	NA
WP_000510412.1|2098087_2098927_-	energy-coupling factor transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	27.6	1.1e-13
WP_000835715.1|2098911_2099739_-	energy-coupling factor transporter ATPase	NA	W8CYL7	Bacillus_phage	33.3	3.5e-17
WP_000712132.1|2099735_2100281_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
WP_078139991.1|2100291_2101122_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_000170184.1|2101154_2102438_-	insulinase family protein	NA	A0A0G2Y5U8	Acanthamoeba_polyphaga_mimivirus	31.0	1.6e-16
WP_000424277.1|2102434_2103685_-	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.5	3.5e-93
WP_000455903.1|2103843_2104212_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
WP_000266669.1|2104214_2105312_+	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
WP_000073428.1|2105362_2106841_-	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	2.2e-94
