assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000018805.1_ASM1880v1	NC_010159	Yersinia pestis Angola, complete sequence	1	1783634-1783898	1,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas6f,cas7f,cas5f,cas8f,cas1	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas1	Type I-F	TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC,TTTCTAAGCTGCCTGTGCGGCAGTGAAC	28,28,28	0	0	NA	NA	I-F:I-F:I-F	4,4,3	4	TypeI-F	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas1	NA|70aa|up_8|NC_010159.1_1771372_1771582_-,NA|425aa|down_1|NC_010159.1_1786044_1787319_-,NA|372aa|down_2|NC_010159.1_1787357_1788473_-	NA|309aa|up_9|NC_010159.1_1770331_1771258_-	PRK11139, PRK11139, DNA-binding transcriptional activator GcvA; Provisional	NA|70aa|up_8|NC_010159.1_1771372_1771582_-	NA	NA|453aa|up_7|NC_010159.1_1771705_1773064_+	cd17316, MFS_SV2_like, Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily	NA|168aa|up_6|NC_010159.1_1773110_1773614_+	COG1795, COG1795, Formaldehyde-activating enzyme nesessary for methanogenesis [Energy    production and conversion]	NA|340aa|up_5|NC_010159.1_1773624_1774644_+	cd19079, AKR_EcYajO-like, Escherichia coli YajO and similar proteins	cas6f|185aa|up_4|NC_010159.1_1774721_1775276_-	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	cas7f|335aa|up_3|NC_010159.1_1775286_1776291_-	pfam09615, Cas_Csy3, CRISPR-associated protein (Cas_Csy3)	cas5f|317aa|up_2|NC_010159.1_1776308_1777259_-	cd09676, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas8f|449aa|up_1|NC_010159.1_1777255_1778602_-	TIGR02564, conserved_hypothetical_protein, CRISPR type I-F/YPEST-associated protein Csy1	cas1|327aa|up_0|NC_010159.1_1782293_1783274_-	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	NA|415aa|down_0|NC_010159.1_1784235_1785480_+	COG0668, MscS, Small-conductance mechanosensitive channel [Cell envelope biogenesis, outer membrane]	NA|425aa|down_1|NC_010159.1_1786044_1787319_-	NA	NA|372aa|down_2|NC_010159.1_1787357_1788473_-	NA	NA|313aa|down_3|NC_010159.1_1788595_1789534_-	pfam08950, DUF1861, Protein of unknown function (DUF1861)	NA|352aa|down_4|NC_010159.1_1789560_1790616_-	cd18612, GH130_Lin0857-like, Glycoside hydrolase family 130 such as Listeria innocua beta-1,2-mannobiose phosphorylase	NA|275aa|down_5|NC_010159.1_1790762_1791587_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|292aa|down_6|NC_010159.1_1791587_1792463_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|347aa|down_7|NC_010159.1_1794086_1795127_+	cd06279, PBP1_LacI-like, ligand-binding domain of an uncharacterized transcription regulator from Corynebacterium glutamicum and its close homologs from other bacteria	NA|463aa|down_8|NC_010159.1_1795143_1796532_+	PRK15414, PRK15414, phosphomannomutase	NA|360aa|down_9|NC_010159.1_1796631_1797711_+	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
GCF_000018805.1_ASM1880v1	NC_010159	Yersinia pestis Angola, complete sequence	2	3128812-3128933	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas1	Orphan	CTTAATGCCAATATTAATCGACATAATCAATTG	33	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas1	NA,NA|73aa|down_0|NC_010159.1_3129289_3129508_+	NA|536aa|up_9|NC_010159.1_3112746_3114354_-	PRK07034, PRK07034, hypothetical protein; Provisional	NA|164aa|up_8|NC_010159.1_3115815_3116307_-	COG3521, COG3521, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|122aa|up_7|NC_010159.1_3116299_3116665_-	pfam13665, DUF4150, Domain of unknown function (DUF4150)	NA|206aa|up_6|NC_010159.1_3116670_3117288_-	pfam12059, DUF3540, Protein of unknown function (DUF3540)	NA|368aa|up_5|NC_010159.1_3117280_3118384_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|740aa|up_4|NC_010159.1_3118409_3120629_-	pfam09937, DUF2169, Uncharacterized protein conserved in bacteria (DUF2169)	NA|341aa|up_3|NC_010159.1_3122645_3123668_+	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|260aa|up_2|NC_010159.1_3123667_3124447_+	PRK09183, PRK09183, transposase/IS protein; Provisional	NA|806aa|up_1|NC_010159.1_3125241_3127659_-	pfam01565, FAD_binding_4, FAD binding domain	NA|249aa|up_0|NC_010159.1_3127812_3128559_-	PRK06172, PRK06172, SDR family oxidoreductase	NA|73aa|down_0|NC_010159.1_3129289_3129508_+	NA	NA|141aa|down_1|NC_010159.1_3129872_3130295_+	COG0764, FabA, 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]	NA|428aa|down_2|NC_010159.1_3130284_3131568_+	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II	NA|246aa|down_3|NC_010159.1_3131569_3132307_+	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs	NA|410aa|down_4|NC_010159.1_3132332_3133562_+	COG3425, PksG, 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]	NA|240aa|down_5|NC_010159.1_3133554_3134274_+	COG1024, CaiD, Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]	NA|251aa|down_6|NC_010159.1_3134275_3135028_+	PRK07110, PRK07110, polyketide biosynthesis enoyl-CoA hydratase; Validated	NA|263aa|down_7|NC_010159.1_3135030_3135819_+	cd05233, SDR_c, classical (c) SDRs	NA|147aa|down_8|NC_010159.1_3135905_3136346_+	pfam13924, Lipocalin_5, Lipocalin-like domain	NA|83aa|down_9|NC_010159.1_3136383_3136632_+	PRK07117, PRK07117, acyl carrier protein; Validated
GCF_000018805.1_ASM1880v1	NC_010159	Yersinia pestis Angola, complete sequence	3	3684298-3684400	3	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas1	Orphan	TTACAACGCGCAATTTCTGTGTTTCGCGCACAGCAAAA	38	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas1	NA,NA	NA|114aa|up_9|NC_010159.1_3672512_3672854_+	PRK10408, PRK10408, L-valine transporter subunit YgaH	NA|171aa|up_8|NC_010159.1_3673025_3673538_+	PRK10870, PRK10870, transcriptional repressor MprA; Provisional	NA|391aa|up_7|NC_010159.1_3673921_3675094_+	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA	NA|512aa|up_6|NC_010159.1_3675132_3676668_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|389aa|up_5|NC_010159.1_3676790_3677957_-	PRK10864, PRK10864, putative methyltransferase; Provisional	NA|146aa|up_4|NC_010159.1_3678208_3678646_+	PRK10996, PRK10996, thioredoxin 2; Provisional	NA|250aa|up_3|NC_010159.1_3678815_3679565_+	COG3148, COG3148, Uncharacterized conserved protein [Function unknown]	NA|881aa|up_2|NC_010159.1_3679607_3682250_+	COG1042, COG1042, Acyl-CoA synthetase (NDP forming) [Energy production and conversion]	NA|452aa|up_1|NC_010159.1_3682425_3683781_+	PRK09428, pssA, CDP-diacylglycerol--serine O-phosphatidyltransferase	NA|114aa|up_0|NC_010159.1_3683842_3684184_+	PRK10759, PRK10759, YfiM family lipoprotein	NA|858aa|down_0|NC_010159.1_3690094_3692668_-	PRK10865, PRK10865, ATP-dependent chaperone ClpB	NA|244aa|down_1|NC_010159.1_3692797_3693529_-	PRK10723, PRK10723, polyphenol oxidase	NA|326aa|down_2|NC_010159.1_3693530_3694508_-	PRK11180, rluD, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD	NA|244aa|down_3|NC_010159.1_3694643_3695375_+	PRK10866, PRK10866, outer membrane protein assembly factor BamD	NA|121aa|down_4|NC_010159.1_3695729_3696092_+	PRK10324, PRK10324, ribosome-associated translation inhibitor RaiA	NA|153aa|down_5|NC_010159.1_3696423_3696882_-	COG1943, COG1943, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|386aa|down_6|NC_010159.1_3697164_3698322_+	PRK10622, pheA, bifunctional chorismate mutase/prephenate dehydratase; Provisional	NA|374aa|down_7|NC_010159.1_3698426_3699548_-	PRK11199, tyrA, bifunctional chorismate mutase/prephenate dehydrogenase; Provisional	NA|357aa|down_8|NC_010159.1_3699560_3700631_-	PRK12755, PRK12755, phospho-2-dehydro-3-deoxyheptonate aldolase; Provisional	NA|239aa|down_9|NC_010159.1_3700863_3701580_+	PRK11697, PRK11697, two-component system response regulator BtsR
GCF_000018805.1_ASM1880v1	NC_010159	Yersinia pestis Angola, complete sequence	4	4143946-4144057	4	CRISPRCasFinder	no		cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas1	Orphan	AAAGCACATTTGAGCAGCGAGTGAAG	26	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,DinG,cas6f,cas7f,cas5f,cas8f,cas1	NA,NA|93aa|down_5|NC_010159.1_4150423_4150702_-,NA|79aa|down_9|NC_010159.1_4154779_4155016_-	NA|268aa|up_9|NC_010159.1_4127453_4128257_-	COG0810, TonB, Periplasmic protein TonB, links inner and outer membranes [Cell envelope biogenesis, outer membrane]	NA|443aa|up_8|NC_010159.1_4128321_4129650_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|603aa|up_7|NC_010159.1_4129725_4131534_-	COG4618, ArpD, ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]	NA|206aa|up_6|NC_010159.1_4131699_4132317_-	pfam06438, HasA, Heme-binding protein A (HasA)	NA|831aa|up_5|NC_010159.1_4132538_4135031_-	TIGR01785, Heme/hemopexin_utilization_protein_C, TonB-dependent heme/hemoglobin receptor family protein	NA|458aa|up_4|NC_010159.1_4135629_4137003_-	PRK04833, PRK04833, argininosuccinate lyase; Provisional	NA|259aa|up_3|NC_010159.1_4137169_4137946_-	cd04249, AAK_NAGK-NC, AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis	NA|335aa|up_2|NC_010159.1_4138097_4139102_-	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated	NA|388aa|up_1|NC_010159.1_4139352_4140516_+	PRK05111, PRK05111, acetylornithine deacetylase; Provisional	NA|879aa|up_0|NC_010159.1_4140889_4143526_+	PRK00009, PRK00009, phosphoenolpyruvate carboxylase; Reviewed	NA|452aa|down_0|NC_010159.1_4144266_4145621_+	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|147aa|down_1|NC_010159.1_4146736_4147177_-	COG3518, COG3518, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|494aa|down_2|NC_010159.1_4147183_4148665_-	COG3517, COG3517, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|166aa|down_3|NC_010159.1_4148732_4149230_-	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and    vesicular transport]	NA|173aa|down_4|NC_010159.1_4149753_4150272_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|93aa|down_5|NC_010159.1_4150423_4150702_-	NA	NA|304aa|down_6|NC_010159.1_4151172_4152084_-	PRK10564, PRK10564, maltose operon protein MalM	NA|424aa|down_7|NC_010159.1_4152324_4153596_-	PRK09360, lamB, maltoporin LamB	NA|370aa|down_8|NC_010159.1_4153666_4154776_-	PRK11000, PRK11000, maltose/maltodextrin ABC transporter ATP-binding protein MalK	NA|79aa|down_9|NC_010159.1_4154779_4155016_-	NA
