The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009719	Parvibaculum lavamentivorans DS-1, complete sequence	3914745	972248	991513	3914745	portal,tail,protease,head,capsid	Paracoccus_phage(23.08%)	24	NA	NA
WP_041535847.1|972248_973499_+	DNA-packaging protein	NA	A0A0U4IJ26	Arthrobacter_phage	42.3	6.6e-76
WP_012109780.1|974468_975644_+|portal	phage portal protein	portal	W8ECU7	Geobacillus_phage	43.8	9.0e-83
WP_041535848.1|975624_975921_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041535849.1|975966_976221_+	hypothetical protein	NA	NA	NA	NA	NA
WP_049767713.1|976426_977077_+|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JAI0	uncultured_Caudovirales_phage	43.3	4.2e-34
WP_012109783.1|977105_978413_+|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	44.3	1.1e-84
WP_012109784.1|978418_978847_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012109785.1|978905_979469_+|head,tail	phage head-tail connector protein	head,tail	A0A141GEW4	Brucella_phage	34.9	7.0e-17
WP_012109786.1|979465_979783_+|head	phage head closure protein	head	Q8HAC9	Salmonella_phage	29.3	7.4e-08
WP_012109787.1|979779_980181_+	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
WP_012109788.1|980393_980807_+|tail	phage major tail protein, TP901-1 family	tail	NA	NA	NA	NA
WP_012109789.1|980814_981729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012109790.1|981843_982161_+	gene transfer agent family protein	NA	NA	NA	NA	NA
WP_143710279.1|982190_982352_+|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
WP_143710280.1|982398_982977_+|tail	phage tail tape measure protein	tail	E7EKW4	Edwardsiella_phage	50.8	4.3e-06
WP_012109793.1|982978_983611_+	DUF2460 domain-containing protein	NA	A0A0B5A2K3	Paracoccus_phage	53.6	1.9e-55
WP_012109794.1|983615_984482_+	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	43.7	1.3e-57
WP_012109795.1|984483_984927_+	C40 family peptidase	NA	F4YXU4	Roseobacter_phage	45.8	6.7e-31
WP_012109796.1|984930_988791_+	glycoside hydrolase TIM-barrel-like domain-containing protein	NA	A0A0B5A7K5	Paracoccus_phage	42.8	1.6e-253
WP_012109797.1|988783_989500_+	DUF2793 domain-containing protein	NA	A0A0K1LM54	Rhodobacter_phage	50.8	1.9e-27
WP_012109798.1|989607_989970_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041535850.1|990009_990201_+	hypothetical protein	NA	NA	NA	NA	NA
WP_143710166.1|990406_990598_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012109800.1|990721_991513_+	SDR family NAD(P)-dependent oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.3	5.2e-10
>prophage 2
NC_009719	Parvibaculum lavamentivorans DS-1, complete sequence	3914745	2091303	2100485	3914745		Bacillus_phage(33.33%)	7	NA	NA
WP_012110832.1|2091303_2092608_-	UDP-glucose/GDP-mannose dehydrogenase family protein	NA	A0A127AXI2	Bacillus_phage	39.9	1.1e-78
WP_012110833.1|2092757_2093729_+	NAD-dependent epimerase/dehydratase family protein	NA	A0A2K9L4U8	Tupanvirus	31.0	1.4e-36
WP_012110834.1|2093815_2094895_+	GDP-mannose 4,6-dehydratase	NA	M1HKY0	Acanthocystis_turfacea_Chlorella_virus	64.7	1.6e-131
WP_041535936.1|2095037_2096102_+	GDP-mannose 4,6-dehydratase	NA	M1IBC3	Acanthocystis_turfacea_Chlorella_virus	50.6	1.2e-94
WP_012110836.1|2096391_2097912_+	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA	NA
WP_012110837.1|2097936_2098824_-	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	46.6	1.6e-68
WP_012110838.1|2099051_2100485_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.7	9.3e-50
>prophage 3
NC_009719	Parvibaculum lavamentivorans DS-1, complete sequence	3914745	3105765	3113983	3914745		Staphylococcus_phage(28.57%)	9	NA	NA
WP_012111827.1|3105765_3106542_+	glycerophosphodiester phosphodiesterase	NA	M1HE48	Acanthocystis_turfacea_Chlorella_virus	28.6	3.7e-16
WP_012111828.1|3106675_3107902_+	5-aminolevulinate synthase	NA	V5LQ39	Emiliania_huxleyi_virus	30.1	1.3e-36
WP_012111829.1|3107891_3108188_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041536044.1|3108205_3108652_-	MucR family transcriptional regulator	NA	A0A1P8VVG0	Erythrobacter_phage	50.4	1.1e-22
WP_012111831.1|3109173_3110490_+	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.9	3.3e-102
WP_012111832.1|3110536_3111025_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
WP_143710235.1|3111106_3112198_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	33.0	1.0e-40
WP_012111834.1|3112202_3112829_+	riboflavin synthase	NA	A0A2I2L4R9	Orpheovirus	32.2	3.7e-19
WP_143710236.1|3112825_3113983_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	39.4	1.2e-55
>prophage 4
NC_009719	Parvibaculum lavamentivorans DS-1, complete sequence	3914745	3227277	3236126	3914745	tRNA	uncultured_Mediterranean_phage(88.89%)	11	NA	NA
WP_083762708.1|3227277_3228180_+	segregation/condensation protein A	NA	A0A1B1IVW1	uncultured_Mediterranean_phage	33.9	1.3e-33
WP_143710342.1|3228221_3228959_+	SMC-Scp complex subunit ScpB	NA	A0A1B1IVT7	uncultured_Mediterranean_phage	50.3	5.9e-48
WP_012111955.1|3229164_3229395_+	twin-arginine translocase TatA/TatE family subunit	NA	A0A1B1IVR9	uncultured_Mediterranean_phage	74.5	9.8e-10
WP_012111956.1|3229455_3229935_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
WP_012111957.1|3229931_3230750_+	twin-arginine translocase subunit TatC	NA	A0A1B1IVR7	uncultured_Mediterranean_phage	46.4	6.1e-54
WP_012111958.1|3230884_3232192_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	50.7	2.5e-110
WP_012111959.1|3232184_3233018_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	37.6	2.1e-38
WP_012111960.1|3233026_3233695_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.1	7.0e-32
WP_143710343.1|3233754_3234714_+	M23 family metallopeptidase	NA	D7RWE0	Brochothrix_phage	30.4	1.1e-06
WP_041536062.1|3234723_3235584_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_012111963.1|3235811_3236126_+	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	43.2	1.7e-12
>prophage 5
NC_009719	Parvibaculum lavamentivorans DS-1, complete sequence	3914745	3247856	3259931	3914745	tRNA	uncultured_Mediterranean_phage(71.43%)	10	NA	NA
WP_049767888.1|3247856_3250886_-	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	64.4	0.0e+00
WP_012111974.1|3251116_3251389_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012111975.1|3251479_3251959_+	single-stranded DNA-binding protein	NA	R9TP78	Rhizobium_phage	55.8	1.3e-43
WP_012111976.1|3251982_3252840_+	protein phosphatase 2C domain-containing protein	NA	NA	NA	NA	NA
WP_049767889.1|3253137_3255915_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	37.8	4.7e-98
WP_012111978.1|3255926_3256439_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	46.2	1.4e-32
WP_012111979.1|3256476_3257022_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	54.7	1.3e-36
WP_012111980.1|3257044_3257518_+	peptidylprolyl isomerase	NA	A0A1B1IVS0	uncultured_Mediterranean_phage	49.4	9.0e-34
WP_012111981.1|3257742_3258795_+|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_012111982.1|3258791_3259931_+|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	52.8	6.2e-97
>prophage 6
NC_009719	Parvibaculum lavamentivorans DS-1, complete sequence	3914745	3365386	3376536	3914745		Escherichia_phage(11.11%)	16	NA	NA
WP_012112076.1|3365386_3366097_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0D4D9V8	Escherichia_phage	44.3	7.4e-48
WP_012112077.1|3366101_3366734_+	7-carboxy-7-deazaguanine synthase	NA	R4TAH8	Halovirus	34.4	3.5e-09
WP_012112078.1|3366733_3367102_+	6-carboxytetrahydropterin synthase	NA	NA	NA	NA	NA
WP_012112079.1|3367101_3367566_+	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	55.1	6.1e-27
WP_143710244.1|3367671_3369042_+	HAMP domain-containing histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	36.1	2.6e-33
WP_012112081.1|3369088_3369745_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	28.6	3.3e-18
WP_012112082.1|3369819_3370728_+	phytanoyl-CoA dioxygenase family protein	NA	NA	NA	NA	NA
WP_012112083.1|3370724_3371558_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	43.4	1.5e-52
WP_012112084.1|3371564_3373193_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	49.8	2.8e-151
WP_012112085.1|3373302_3373737_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
WP_012112086.1|3373975_3374167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012112087.1|3374170_3374341_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012112088.1|3374373_3374601_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012112089.1|3374650_3374860_-	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	53.6	8.6e-13
WP_012112090.1|3375088_3375991_-	putative transmembrane anti-sigma factor	NA	NA	NA	NA	NA
WP_012112092.1|3375987_3376536_-	RNA polymerase sigma factor	NA	A0A0F6TH34	Sinorhizobium_phage	29.8	4.0e-09
