bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	3.1|860057|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	96.77	31	1	0	1	31	1777721	1777751	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	7e-08	47.5	1.0	CTGTGTTGGGGCCCCGCCAACTTGCATTGCC	1777721-1777751	CTGTGTTGGGGCCCCGCCAACTTCCATTGCC	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	182347	182326	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	182326-182347	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	305423	305402	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	305402-305423	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	692043	692022	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	692022-692043	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	818127	818148	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	818127-818148	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	908788	908809	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	908788-908809	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	1473203	1473182	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1473182-1473203	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	1561736	1561757	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1561736-1561757	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	1743314	1743335	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1743314-1743335	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	1757869	1757848	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1757848-1757869	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	2075599	2075620	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2075599-2075620	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.45	22	1	0	1	22	1023108	1023129	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1023108-1023129	CCTGTAGAATTTCTTTTAGAAA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.45	22	1	0	1	22	1777576	1777597	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1777576-1777597	CCTGTAGAATTTCTTTACGAAA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.1|865524|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.45	22	1	0	1	22	1777809	1777830	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1777809-1777830	CCTGTAGAATTTCTTTACGAAA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.2|865582|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	819099	819077	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	819077-819099	ATTGGATTCCCAATTTCTACAGA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.2|865582|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	819377	819355	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	819355-819377	ATTGGATTCCCAATTTCTACAGA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.2|865582|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	1473320	1473298	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1473298-1473320	ATTGGATTCCCAATTTCTACAGA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.2|865582|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	2075657	2075679	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	2075657-2075679	TCTGTAGAAATTGGGAATCCAAT	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.2|865582|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	2415270	2415292	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	2415270-2415292	TCTGTAGAAATTGGGAATCCAAT	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.2|865582|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	91.30	23	2	0	1	23	1561619	1561641	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1561619-1561641	TCTGTAGAAATTGGGAATACAAT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.2|865582|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	91.30	23	2	0	1	23	2176562	2176584	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	2176562-2176584	TCTGTTGAAATTGGGAATCCAAT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	182347	182326	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	182326-182347	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	305423	305402	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	305402-305423	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	692043	692022	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	692022-692043	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	818127	818148	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	818127-818148	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	908788	908809	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	908788-908809	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	1473203	1473182	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1473182-1473203	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	1561736	1561757	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1561736-1561757	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	1743314	1743335	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1743314-1743335	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	1757869	1757848	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	1757848-1757869	TTTCGAAAAGAAATTCTACAGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	22	0	0	1	22	2075599	2075620	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-04	36.5	1.0	CCTGTAGAATTTCTTTTCGAAA	2075599-2075620	CCTGTAGAATTTCTTTTCGAAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.45	22	1	0	1	22	1023108	1023129	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1023108-1023129	CCTGTAGAATTTCTTTTAGAAA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.45	22	1	0	1	22	1777576	1777597	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1777576-1777597	CCTGTAGAATTTCTTTACGAAA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.3|865641|22|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.45	22	1	0	1	22	1777809	1777830	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.001	33.3	1.0	CCTGTAGAATTTCTTTTCGAAA	1777809-1777830	CCTGTAGAATTTCTTTACGAAA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.4|865699|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	819099	819077	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	819077-819099	ATTGGATTCCCAATTTCTACAGA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.4|865699|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	819377	819355	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	819355-819377	ATTGGATTCCCAATTTCTACAGA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.4|865699|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	1473320	1473298	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	1473298-1473320	ATTGGATTCCCAATTTCTACAGA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.4|865699|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	2075657	2075679	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	2075657-2075679	TCTGTAGAAATTGGGAATCCAAT	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.4|865699|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	95.65	23	1	0	1	23	2415270	2415292	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-04	34.9	1.0	TCTGTAGAAATTGGAAATCCAAT	2415270-2415292	TCTGTAGAAATTGGGAATCCAAT	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.4|865699|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	91.30	23	2	0	1	23	1561619	1561641	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	1561619-1561641	TCTGTAGAAATTGGGAATACAAT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	4.4|865699|23|NC_009632|CRT	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	91.30	23	2	0	1	23	2176562	2176584	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	0.003	31.7	1.0	TCTGTAGAAATTGGAAATCCAAT	2176562-2176584	TCTGTTGAAATTGGGAATCCAAT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	5.1|908739|34|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	97.06	34	1	0	1	34	1473311	1473278	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-09	52.3	1.0	ATTGAGAATCCAATTTCTCTTTGTTGGGGCCCAT	1473278-1473311	ATGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	6.1|1743264|33|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	96.97	33	1	0	1	33	1473311	1473279	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	1e-08	50.7	1.0	ATTGGGAATCCAATTTCTCTGTGTTGGGGCCCA	1473279-1473311	TGGGCCCCAACAAAGAGAAATTGGATTCCCAAT	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	7.1|2176505|34|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	34	0	0	1	34	860032	860065	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	5e-10	55.5	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	860032-860065	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	7.1|2176505|34|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	100.00	34	0	0	1	34	1261569	1261536	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	5e-10	55.5	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	1261536-1261569	CCAACACAGAGAATTTCGAAAAGAAATTCTACAA	0
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	7.1|2176505|34|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	97.06	34	1	0	1	34	1869982	1869949	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-09	52.3	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	1869949-1869982	CCAACACAAAGAATTTCGAAAAGAAATTCTACAA	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	7.1|2176505|34|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	94.12	34	2	0	1	34	1477652	1477685	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-08	49.1	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	1477652-1477685	TTGTGGAATTTCTTATCGAAATTCTCTGTGTTGG	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	7.1|2176505|34|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	94.12	34	2	0	1	34	2865920	2865953	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	4e-08	49.1	1.0	TTGTAGAATTTCTTTTCGAAATTCTCTGTGTTGG	2865920-2865953	TTGTAGAATTTCTTTTCGAAATTCTTTTTGTTGG	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	96.77	31	1	0	1	31	872776	872806	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	7e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	872776-872806	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	96.77	31	1	0	1	31	872832	872862	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	7e-08	47.5	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	872832-872862	CACATTATTGTAAGCTGACTTTCCGTCAGCT	1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	83683	83713	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	83683-83713	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	424836	424806	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	424806-424836	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	692107	692077	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	692077-692107	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	909051	909081	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	909051-909081	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	1164609	1164639	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1164609-1164639	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	1267167	1267137	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1267137-1267167	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	1473267	1473237	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1473237-1473267	AGCTGACGAAAAGTCAGCTTACAATAATGTG	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	1561672	1561702	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1561672-1561702	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	1561788	1561818	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1561788-1561818	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	1757932	1757902	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	1757902-1757932	AGCTGGCGGAAAGTCAGCTTACAATAATGTG	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	2415323	2415353	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2415323-2415353	CACATTATTGTAAGCTGACTTTTCGTCAGCT	2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	10.1|2426124|31|NC_009632|CRISPRCasFinder	NC_009632.1	Staphylococcus aureus subsp. aureus JH1, complete sequence	93.55	31	2	0	1	31	2592321	2592351	463544-463645|819086-819168|860033-860111|865488-865757|908715-908796|1743238-1743322|2176481-2176562|2305738-2305818|2318059-2318144|2426099-2426179	6e-07	44.4	1.0	CACATTATTGTAAGCTGACTTTCTGTCAGCT	2592321-2592351	CACATTATTGTAAGCTGACTTTCCGCCAGCT	2
