The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	361228	403492	2906507	portal,terminase,head,plate,integrase,holin,tail,capsid	Staphylococcus_phage(86.15%)	65	361118:361135	404224:404241
361118:361135	attL	ATCATACAAGGATGGGAT	NA	NA	NA	NA
WP_000264186.1|361228_362434_-|integrase	site-specific integrase	integrase	Q4ZBP1	Staphylococcus_phage	100.0	8.5e-222
WP_000337827.1|362544_362724_+	hypothetical protein	NA	Q4ZBP0	Staphylococcus_phage	100.0	3.7e-25
WP_001077638.1|362849_363341_-	hypothetical protein	NA	Q4ZBN8	Staphylococcus_phage	100.0	7.5e-84
WP_000525016.1|363361_363823_-	hypothetical protein	NA	Q4ZBN7	Staphylococcus_phage	100.0	1.2e-83
WP_001260487.1|363835_364159_-	helix-turn-helix transcriptional regulator	NA	A0A0H3U2V8	Staphylococcus_phage	100.0	2.0e-53
WP_000272858.1|364322_364571_+	helix-turn-helix transcriptional regulator	NA	Q4ZBN5	Staphylococcus_phage	100.0	2.2e-39
WP_001153175.1|364585_364747_+	hypothetical protein	NA	Q4ZBN4	Staphylococcus_phage	100.0	1.9e-20
WP_044118938.1|364739_365033_-	hypothetical protein	NA	Q4ZB03	Staphylococcus_virus	98.8	4.0e-40
WP_000933365.1|365426_365612_+	helix-turn-helix transcriptional regulator	NA	A0A0H4IP57	Staphylococcus_phage	100.0	1.3e-25
WP_001148634.1|365613_366366_+	phage antirepressor KilAC domain-containing protein	NA	A0A0E3T9K5	Staphylococcus_phage	99.2	4.8e-138
WP_000993180.1|366381_366600_+	hypothetical protein	NA	Q4ZBN1	Staphylococcus_phage	100.0	1.1e-31
WP_001124198.1|366629_366893_+	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_000066020.1|366904_367066_+	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|367160_367463_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|367467_367728_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|367736_368000_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700554.1|368008_369952_+	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
WP_000180599.1|369953_370874_+	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	99.7	4.3e-165
WP_064135358.1|370954_371572_+	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000934759.1|371572_372043_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_000148333.1|372072_372966_+	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000338528.1|372972_373191_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401969.1|373199_373604_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000101282.1|373616_373985_+	hypothetical protein	NA	A0A0H4J337	Staphylococcus_phage	96.7	6.9e-50
WP_000132210.1|373988_374231_+	hypothetical protein	NA	Q4ZBD5	Staphylococcus_virus	97.5	1.2e-39
WP_000693995.1|374244_374451_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	98.5	8.7e-34
WP_000695762.1|374453_374855_+	hypothetical protein	NA	Q4ZAC1	Staphylococcus_virus	100.0	1.1e-69
WP_000979209.1|374851_375199_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000144711.1|375195_375504_+	hypothetical protein	NA	R4IFL1	Staphylococcus_phage	100.0	4.8e-52
WP_001065026.1|375496_375745_+	DUF1024 family protein	NA	S4V7K0	Staphylococcus_phage	100.0	4.1e-38
WP_000185682.1|375737_376274_+	dUTP diphosphatase	NA	A0A0N9BAX6	Staphylococcus_phage	100.0	1.6e-95
WP_000195831.1|376310_376547_+	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	100.0	1.1e-35
WP_000483479.1|376571_376808_+	hypothetical protein	NA	A0A0N7E0U3	Staphylococcus_phage	88.5	1.9e-32
WP_001580341.1|376797_377187_+	hypothetical protein	NA	A0A0N9BB01	Staphylococcus_phage	100.0	1.1e-64
WP_000595257.1|377183_377357_+	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_000989954.1|377357_377723_+	hypothetical protein	NA	Q4ZBJ9	Staphylococcus_phage	100.0	3.6e-59
WP_000989960.1|377723_377870_+	hypothetical protein	NA	Q4ZBJ8	Staphylococcus_phage	100.0	7.5e-16
WP_000162702.1|377893_378316_+	RinA family phage transcriptional activator	NA	Q4ZBJ7	Staphylococcus_phage	100.0	1.2e-74
WP_000594082.1|378643_379138_+|terminase	terminase	terminase	R4IH30	Staphylococcus_phage	100.0	1.1e-74
WP_000606640.1|379130_380339_+|terminase	PBSX family phage terminase large subunit	terminase	R4IG95	Staphylococcus_phage	99.8	3.0e-235
WP_001159668.1|380292_381771_+|portal	phage portal protein	portal	Q4ZB45	Staphylococcus_virus	99.6	3.3e-284
WP_001795666.1|381709_382690_+|head	phage head morphogenesis protein	head	Q4ZAW9	Staphylococcus_virus	98.2	3.3e-179
WP_000366932.1|382787_383384_+	phage scaffolding protein	NA	R4IG73	Staphylococcus_phage	100.0	5.6e-73
WP_001135558.1|383404_384229_+|capsid	N4-gp56 family major capsid protein	capsid	R4IH32	Staphylococcus_phage	100.0	5.6e-148
WP_000278799.1|384245_384572_+	Rho termination factor N-terminal domain-containing protein	NA	A0A0E3TAL3	Staphylococcus_phage	100.0	4.3e-51
WP_000338935.1|384571_384886_+|head,tail	phage head-tail connector protein	head,tail	R4IFL8	Staphylococcus_phage	100.0	4.0e-54
WP_000482986.1|384878_385214_+|head	phage head closure protein	head	A0A2H4PQL0	Staphylococcus_phage	100.0	3.0e-60
WP_001151335.1|385200_385614_+	HK97 gp10 family phage protein	NA	R4IG77	Staphylococcus_phage	100.0	2.0e-77
WP_000270197.1|385626_386064_+	DUF3168 domain-containing protein	NA	A0A0E3T9M9	Staphylococcus_phage	99.3	7.9e-77
WP_000046067.1|386050_386611_+	hypothetical protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
WP_000141082.1|386672_387167_+	hypothetical protein	NA	R4IFM1	Staphylococcus_phage	100.0	4.3e-87
WP_001580347.1|387187_387529_+	hypothetical protein	NA	A0A2H4PQL5	Staphylococcus_phage	100.0	3.5e-56
WP_000414235.1|387531_390501_+|terminase	terminase	terminase	Q4ZAG7	Staphylococcus_virus	99.1	1.9e-262
WP_000560196.1|390515_391451_+|tail	phage tail family protein	tail	R4IH41	Staphylococcus_phage	100.0	8.2e-180
WP_001144708.1|391461_393348_+|tail	phage tail protein	tail	R4IGA4	Staphylococcus_phage	99.7	0.0e+00
WP_000323256.1|393360_395259_+	hypothetical protein	NA	A0A0H3U448	Staphylococcus_phage	98.4	0.0e+00
WP_000259638.1|395258_397082_+|plate	phage baseplate upper protein	plate	B1H3M3	Staphylococcus_phage	99.8	0.0e+00
WP_000705893.1|397081_397459_+	DUF2977 domain-containing protein	NA	Q8LTH7	Staphylococcus_phage	100.0	7.3e-55
WP_001790193.1|397462_397636_+	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
WP_000466769.1|397676_397976_+	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
WP_000524044.1|398112_399987_+	glucosaminidase domain-containing protein	NA	A0A2I6PCX0	Staphylococcus_phage	100.0	0.0e+00
WP_000276655.1|399999_401172_+|plate	BppU family phage baseplate upper protein	plate	A0EWN2	Staphylococcus_virus	99.7	2.4e-197
WP_000398864.1|401177_401573_+	hypothetical protein	NA	A9CRD5	Staphylococcus_phage	99.2	4.7e-68
WP_000354129.1|401628_402066_+|holin	phage holin	holin	A7YGY0	Staphylococcus_virus	97.9	5.9e-72
WP_001148113.1|402046_403492_+	SH3 domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	99.0	3.8e-293
404224:404241	attR	ATCATACAAGGATGGGAT	NA	NA	NA	NA
>prophage 2
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	797205	805026	2906507		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|797205_798261_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|798260_798947_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|798921_799395_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|799737_800178_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|800457_801042_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|801140_801854_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|801857_802277_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|802278_802947_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|803297_803891_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217796.1|803874_805026_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
>prophage 3
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	816997	831638	2906507		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|816997_818056_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197262.1|818394_818937_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|819815_820733_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031760357.1|820823_820925_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|821002_822508_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|822848_823349_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068501.1|823368_824235_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|825035_825434_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855514.1|825396_827502_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|827619_828591_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|828771_828927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|828965_829937_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|829923_830880_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|830876_831638_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 4
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	917117	974048	2906507	portal,terminase,transposase,head,plate,integrase,holin,tail,capsid	Staphylococcus_phage(75.34%)	85	915214:915230	949868:949884
915214:915230	attL	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_001006450.1|917117_918368_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.1e-110
WP_001010508.1|918357_918822_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_001074415.1|918972_920370_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001145726.1|920437_921487_-|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	99.7	4.5e-203
WP_000337826.1|921599_921779_+	hypothetical protein	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
WP_000392186.1|921758_922691_-	hypothetical protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
WP_000661437.1|922722_923448_-	PH domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_000775187.1|923475_924150_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_001055143.1|924166_924499_-	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_000108122.1|924761_924956_+	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
WP_001002757.1|924955_925723_+	phage antirepressor Ant	NA	A0A0F6N3N8	Staphylococcus_phage	100.0	1.1e-142
WP_000187184.1|925723_925948_+	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001094943.1|925987_926437_+	hypothetical protein	NA	A1KWZ2	Staphylococcus_virus	100.0	3.0e-79
WP_000977381.1|926450_926672_+	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
WP_000066011.1|926664_926826_+	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
WP_000165363.1|926919_927222_+	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
WP_000291090.1|927226_927487_+	DUF1108 family protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
WP_000815401.1|927496_927718_+	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000139720.1|927710_928334_+	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000934385.1|928333_928762_+	single-stranded DNA-binding protein	NA	B2ZYV4	Staphylococcus_phage	100.0	3.9e-60
WP_001124438.1|928775_929450_+	hypothetical protein	NA	R4IH15	Staphylococcus_phage	96.9	1.4e-125
WP_001081076.1|929446_929596_+	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_000414755.1|929588_929870_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_000190254.1|929935_930706_+	phage protein	NA	G4KNP0	Staphylococcus_phage	100.0	6.4e-122
WP_000803062.1|930715_931495_+	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000256589.1|931488_931647_+	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_001123695.1|931659_931881_+	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000049794.1|931890_932295_+	DUF1064 domain-containing protein	NA	A1KX76	Staphylococcus_virus	100.0	9.6e-69
WP_001187243.1|932299_932485_+	DUF3113 family protein	NA	A0A0F6N3K7	Staphylococcus_phage	100.0	1.1e-27
WP_000101252.1|932485_932791_+	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
WP_000029376.1|932918_933275_+	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	100.0	6.5e-61
WP_000131376.1|933278_933521_+	hypothetical protein	NA	A0A0F6N3E1	Staphylococcus_phage	98.8	1.9e-40
WP_001557190.1|933529_933901_+	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	100.0	3.6e-54
WP_001065060.1|933893_934148_+	DUF1024 family protein	NA	A1KX15	Staphylococcus_virus	97.6	2.5e-38
WP_000714412.1|934134_934305_+	hypothetical protein	NA	A7TWH6	Staphylococcus_phage	91.1	1.5e-20
WP_000185647.1|934297_934831_+	dUTP pyrophosphatase	NA	A1KX16	Staphylococcus_virus	99.4	2.4e-96
WP_000617154.1|934867_935074_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	72.1	1.0e-18
WP_000132921.1|935070_935265_+	hypothetical protein	NA	A0A2I6PEC2	Staphylococcus_phage	100.0	6.0e-29
WP_001072795.1|935261_935465_+	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
WP_000608278.1|935457_935694_+	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
WP_000595257.1|935686_935860_+	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_000990004.1|935860_935965_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	7.0e-08
WP_000162701.1|936030_936453_+	RinA family phage transcriptional activator	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
WP_001038244.1|936640_937135_+|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	100.0	7.8e-89
WP_000273011.1|937137_938433_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0F6N3L3	Staphylococcus_phage	100.0	3.0e-257
WP_000909970.1|938443_939982_+|portal	phage portal protein	portal	A0A0F6N4I8	Staphylococcus_phage	100.0	2.4e-293
WP_001133044.1|939988_940984_+|capsid	minor capsid protein	capsid	A0A0F6N3F1	Staphylococcus_phage	100.0	2.0e-184
WP_000072208.1|941056_941227_+	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
WP_000392151.1|941335_941956_+	DUF4355 domain-containing protein	NA	S4V984	Staphylococcus_phage	98.5	1.7e-69
WP_000438511.1|941969_942944_+|capsid	phage major capsid protein	capsid	E0Y3L0	Staphylococcus_virus	100.0	2.2e-183
WP_001114086.1|942965_943253_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.4e-45
WP_000208960.1|943261_943594_+|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001268312.1|943590_943893_+	hypothetical protein	NA	A4ZFB6	Staphylococcus_virus	100.0	1.1e-50
WP_001017815.1|943892_944240_+	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_000188643.1|944251_944635_+	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	98.4	3.8e-67
WP_000002577.1|944653_945235_+|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
WP_001100161.1|945296_945662_+|tail	tail assembly chaperone	tail	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
WP_000105584.1|945691_946036_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_000141480.1|946052_949520_+	hypothetical protein	NA	A0A0F6N3F9	Staphylococcus_phage	100.0	4.2e-245
WP_000350675.1|949532_950480_+|tail	phage tail family protein	tail	A0A0F6N3L4	Staphylococcus_phage	100.0	2.8e-183
949868:949884	attR	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_000152716.1|950488_952390_+|tail	phage tail protein	tail	I1W634	Staphylococcus_phage	99.7	0.0e+00
WP_000369003.1|952404_954315_+	hypothetical protein	NA	Q4ZDU1	Staphylococcus_virus	98.7	0.0e+00
WP_000259619.1|954314_956138_+|plate	BppU family phage baseplate upper protein	plate	A1KX42	Staphylococcus_virus	99.2	3.9e-295
WP_000705896.1|956137_956515_+	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000782200.1|956518_956692_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000466778.1|956731_957031_+	DUF2951 domain-containing protein	NA	A0A0H4ITZ0	Staphylococcus_phage	100.0	7.6e-47
WP_000524022.1|957167_959066_+	glucosaminidase domain-containing protein	NA	A0EX80	Staphylococcus_virus	99.7	0.0e+00
WP_000276662.1|959078_960317_+|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	100.0	1.6e-210
WP_000398868.1|960322_960718_+	hypothetical protein	NA	A1KXB6	Staphylococcus_virus	100.0	1.6e-68
WP_000351119.1|960773_961049_+|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_001141517.1|961035_962448_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0F6N3N1	Staphylococcus_phage	100.0	5.8e-286
WP_001035620.1|962507_963065_-	DUF4888 domain-containing protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
WP_001788502.1|963439_963592_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_000139423.1|963662_963773_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001286805.1|963774_963960_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
WP_000274029.1|964789_965104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000582326.1|965468_966509_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_000267236.1|966522_967590_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_016170465.1|967843_967927_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000608129.1|967974_968823_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_000927632.1|968835_969663_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_001241246.1|969689_971009_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000201875.1|971092_972010_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_000598444.1|972139_972523_+	YutD family protein	NA	NA	NA	NA	NA
WP_001557163.1|972728_974048_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	1073228	1146081	2906507	portal,terminase,bacteriocin,head,plate,protease,integrase,holin,tail,capsid	Staphylococcus_phage(88.24%)	92	1076074:1076100	1121577:1121603
WP_001049950.1|1073228_1074791_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
WP_000928413.1|1075092_1075896_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
1076074:1076100	attL	ATTAGGTGTTAATGTGTCATAATGATA	NA	NA	NA	NA
WP_000264741.1|1076184_1077390_-|integrase	site-specific integrase	integrase	B7T0F2	Staphylococcus_virus	98.5	1.2e-218
WP_000191459.1|1077515_1078130_+	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_001013104.1|1078126_1078273_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000825948.1|1078502_1079087_-	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	100.0	1.4e-68
WP_000525004.1|1079104_1079566_-	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000333630.1|1079578_1079893_-	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	100.0	9.8e-53
WP_001121027.1|1080044_1080281_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_001148544.1|1080294_1081071_+	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_000939498.1|1081099_1081243_+	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000642492.1|1081232_1081442_-	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
WP_001025401.1|1081497_1081743_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001128433.1|1081711_1082077_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001097552.1|1082131_1082347_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001124160.1|1082371_1082635_+	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
WP_001285954.1|1082647_1082809_+	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_000175002.1|1082887_1083211_+	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	99.1	8.5e-52
WP_000985976.1|1083225_1083588_+	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	100.0	4.9e-56
WP_000762547.1|1083584_1084751_+	DUF2800 domain-containing protein	NA	A0A2D1G5B8	Staphylococcus_phage	100.0	8.3e-222
WP_000645042.1|1084776_1085334_+	DUF2815 family protein	NA	A0A2I6PF05	Staphylococcus_phage	100.0	1.8e-97
WP_078055733.1|1085402_1087355_+	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	99.8	0.0e+00
WP_001164630.1|1087367_1087553_+	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	98.4	2.1e-26
WP_000113974.1|1087552_1087954_+	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_000022736.1|1087953_1088208_+	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	100.0	1.3e-42
WP_060474161.1|1088207_1088456_+	hypothetical protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.2e-40
WP_000693988.1|1088469_1088676_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	97.1	1.1e-33
WP_000979209.1|1089068_1089416_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000219084.1|1089412_1089802_+	acetyltransferase	NA	A0A0F6N3K4	Staphylococcus_phage	92.5	9.9e-47
WP_001065051.1|1089794_1090043_+	DUF1024 family protein	NA	A0A0E3T8I2	Staphylococcus_phage	97.6	4.5e-37
WP_000185680.1|1090035_1090572_+	dUTP diphosphatase	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
WP_000195803.1|1090608_1090815_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592211.1|1090811_1091198_+	hypothetical protein	NA	A0A0H3U465	Staphylococcus_phage	100.0	5.2e-64
WP_000595263.1|1091194_1091347_+	transcriptional activator RinB	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
WP_000265252.1|1091414_1091615_+	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
WP_000884878.1|1091902_1094350_+	virulence-associated E family protein	NA	B5WZN5	Staphylococcus_phage	99.8	0.0e+00
WP_015978074.1|1094452_1094557_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_000665203.1|1094690_1094981_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_001793488.1|1094961_1096329_+	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	100.0	1.7e-263
WP_000513699.1|1096341_1096779_+	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
WP_000160689.1|1096935_1097250_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000778932.1|1097378_1097684_+|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_000153555.1|1097673_1099365_+|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
WP_001100670.1|1099369_1100608_+|portal	phage portal protein	portal	A0A2I6PEA6	Staphylococcus_phage	100.0	6.9e-235
WP_000061868.1|1100591_1101365_+|protease	Clp protease ClpP	protease	A0A2I6PE26	Staphylococcus_phage	100.0	4.9e-138
WP_001142735.1|1101376_1102540_+|capsid	phage major capsid protein	capsid	A0A2I6PE62	Staphylococcus_phage	100.0	3.6e-217
WP_000050975.1|1102608_1102887_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
WP_000395501.1|1102898_1103231_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000110020.1|1103227_1103629_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|1103629_1104025_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807540.1|1104059_1104701_+|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	100.0	1.0e-120
WP_000169127.1|1104792_1105248_+	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_000589167.1|1105305_1105656_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|1105697_1105856_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_001003430.1|1105869_1112070_+|tail	phage tail tape measure protein	tail	M9QQM6	Staphylococcus_phage	99.4	0.0e+00
WP_001190533.1|1112069_1112894_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384462.1|1112902_1114486_+|tail	phage tail protein	tail	Q8SDP1	Staphylococcus_virus	100.0	7.1e-309
WP_000179864.1|1114485_1114776_+	hypothetical protein	NA	R4WEC3	Staphylococcus_phage	100.0	2.1e-49
WP_000429552.1|1114791_1116702_+	hypothetical protein	NA	A0A2K9VBU3	Staphylococcus_phage	100.0	0.0e+00
WP_000067128.1|1116701_1118168_+|plate	phage baseplate upper protein	plate	A0A2I6PDE3	Staphylococcus_phage	99.4	1.3e-272
WP_001166599.1|1118167_1118557_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|1118549_1118714_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|1118759_1119059_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000354132.1|1119194_1119632_+|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	100.0	4.1e-73
WP_001148112.1|1119612_1121058_+	SH3 domain-containing protein	NA	A0A0H3U310	Staphylococcus_phage	99.8	2.2e-296
WP_001795272.1|1121617_1123942_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
1121577:1121603	attR	ATTAGGTGTTAATGTGTCATAATGATA	NA	NA	NA	NA
WP_000021865.1|1123958_1125317_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414165.1|1125455_1126967_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1127453_1128023_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|1128232_1128451_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668818.1|1128531_1129518_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1129716_1129893_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033865.1|1129907_1130510_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_041202886.1|1131425_1131527_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001797239.1|1131536_1131809_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870829.1|1131852_1133817_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668627.1|1133819_1134140_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571167.1|1134136_1134778_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
WP_001795266.1|1134865_1135156_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001792054.1|1135296_1135434_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_000766008.1|1135522_1135879_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081351.1|1136366_1137326_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001790177.1|1137371_1137503_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867357.1|1137566_1137782_-	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_000620949.1|1137946_1138498_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|1138549_1139488_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190622.1|1139669_1141031_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526694.1|1141017_1142691_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150197.1|1142677_1143481_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000184945.1|1143473_1144295_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284458.1|1144532_1144862_-	staphostatin B	NA	NA	NA	NA	NA
WP_001089094.1|1144899_1146081_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 6
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	1166119	1174592	2906507		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861573.1|1166119_1166602_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010413.1|1166588_1167713_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1167716_1168421_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1168420_1168684_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|1168685_1169357_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032740.1|1169349_1171539_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|1171517_1173002_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|1172994_1174023_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|1174025_1174592_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 7
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	1792908	1801951	2906507	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1792908_1793427_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|1793448_1795722_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749795.1|1795924_1798204_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1798478_1798739_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1798757_1799897_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1799919_1800945_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1800946_1801951_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	1931955	2039766	2906507	tRNA,transposase,protease	Staphylococcus_phage(92.31%)	98	NA	NA
WP_001050564.1|1931955_1938516_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000836461.1|1938841_1939153_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001557386.1|1939174_1941592_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|1941879_1943061_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|1943170_1944124_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1944120_1944684_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1944806_1945208_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1945779_1946607_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1946609_1946729_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196362.1|1946839_1947841_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001008549.1|1947962_1948427_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|1948439_1949621_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|1949631_1950264_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_000077358.1|1950270_1951314_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
WP_001261668.1|1951794_1953297_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|1953819_1954134_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|1954133_1955426_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_001032833.1|1955512_1956367_-	N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1956642_1956867_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|1957065_1957536_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|1957648_1958092_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1958078_1958522_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168903.1|1958817_1959453_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1959892_1960606_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091442.1|1960865_1961168_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1961423_1961789_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|1961785_1962139_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|1964135_1964969_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|1965180_1966089_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|1966210_1967407_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|1967778_1969371_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001822900.1|1969748_1970495_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000672013.1|1970499_1970973_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1971038_1971296_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778528.1|1971292_1972294_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000348364.1|1972298_1973777_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|1973935_1974391_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|1974694_1975345_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|1975425_1976421_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669024.1|1976495_1977122_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000627540.1|1977162_1977504_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|1977604_1978177_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|1979531_1979627_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|1979749_1979851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072627.1|1980926_1982156_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_000028669.1|1982148_1983705_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
WP_001791797.1|1983868_1984003_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038702.1|1984065_1984785_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	98.3	1.0e-129
WP_001038872.1|1984905_1985625_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001039454.1|1985682_1986405_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001039427.1|1986529_1987237_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001092780.1|1988200_1988782_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_000550252.1|1989728_1990202_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000543854.1|1990206_1990998_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782463.1|1991367_1992351_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000473593.1|1992352_1993288_-	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	5.1e-174
WP_000206343.1|1994651_1995440_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	98.5	3.6e-144
WP_001253432.1|1996273_1996768_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000617704.1|1996845_1997082_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000848318.1|1997102_1997879_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000736712.1|1998430_1999207_-	staphylococcal enterotoxin type G	NA	NA	NA	NA	NA
WP_001236362.1|1999489_2000245_-	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
WP_000713847.1|2001208_2001937_-	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
WP_000821658.1|2001971_2002691_-	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
WP_010922839.1|2002971_2003754_-	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_000132890.1|2005113_2005668_-	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_000167542.1|2005990_2007391_-	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000162881.1|2007414_2008338_-	ferrochelatase	NA	NA	NA	NA	NA
WP_000233526.1|2008395_2009433_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_001790154.1|2009422_2009533_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000737975.1|2009695_2010199_+	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_000551836.1|2010322_2011546_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000216874.1|2011538_2012279_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_000004981.1|2012412_2012835_+	HIT family protein	NA	NA	NA	NA	NA
WP_000648118.1|2012976_2013342_+	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000477959.1|2014076_2014634_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_000782121.1|2014838_2015801_+	foldase	NA	NA	NA	NA	NA
WP_001244175.1|2015921_2016863_-	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_000584630.1|2016859_2019796_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000238227.1|2019785_2020982_-	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_001802255.1|2021272_2021371_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000290301.1|2021909_2022254_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_000992518.1|2022322_2023447_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_001557163.1|2023725_2025045_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000375864.1|2025145_2025610_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001045135.1|2025965_2026589_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000437969.1|2026610_2027723_-	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_000669376.1|2027885_2028707_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000116228.1|2029159_2030545_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000901023.1|2030740_2031136_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000031108.1|2031683_2031836_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001251224.1|2031860_2032460_-	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000181395.1|2032618_2033089_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_000379980.1|2033093_2034221_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000590809.1|2034371_2035094_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
WP_000649908.1|2035086_2036544_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_000063582.1|2036801_2037863_-	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_001557163.1|2038446_2039766_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NC_009632	Staphylococcus aureus subsp. aureus JH1, complete sequence	2906507	2087037	2181445	2906507	portal,terminase,head,protease,integrase,capsid,tail,tRNA,holin	Staphylococcus_phage(84.62%)	114	2084933:2084957	2183731:2183755
2084933:2084957	attL	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_000027917.1|2087037_2088495_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|2088496_2088799_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|2089165_2090704_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831700.1|2090792_2091992_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774556.1|2092004_2094008_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_000992924.1|2094011_2096204_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272056.1|2096200_2096893_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|2097064_2097367_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|2097475_2098771_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827746.1|2099630_2100797_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|2100827_2101154_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|2101445_2101619_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|2101599_2102202_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|2102472_2103294_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284436.1|2103286_2104756_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000897635.1|2104939_2106016_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|2106035_2106830_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|2106901_2107009_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|2107019_2108582_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275727.1|2108786_2109884_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|2110252_2110813_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2110865_2111795_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|2111987_2112161_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021211.1|2112212_2113592_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|2113711_2114740_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|2115009_2115411_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|2115983_2116157_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|2116607_2117648_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|2117704_2118547_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|2118543_2119101_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|2119160_2119685_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|2119805_2120369_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|2120434_2121175_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|2121174_2122047_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_000645727.1|2122043_2122724_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|2122724_2123621_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|2123617_2123998_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|2124255_2124432_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2124674_2124773_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068540.1|2124972_2126259_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000671712.1|2126537_2126828_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001557458.1|2126842_2128273_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
WP_000669789.1|2129230_2129410_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|2129720_2129981_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|2130033_2130384_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000727649.1|2131068_2131518_+	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_000919350.1|2132597_2133089_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000861038.1|2133279_2134035_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|2134046_2134301_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|2134352_2134460_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|2134512_2134689_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000539688.1|2134838_2135135_-	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_001040261.1|2135192_2135480_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_001153681.1|2135526_2135679_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582154.1|2135668_2139454_-	hypothetical protein	NA	Q6R866	Staphylococcus_virus	98.3	0.0e+00
WP_000567396.1|2139469_2140954_-|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	99.8	4.5e-297
WP_001557459.1|2140950_2145483_-|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	98.9	0.0e+00
WP_001096355.1|2145727_2146078_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|2146127_2146352_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000985142.1|2146393_2147038_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	99.1	1.9e-119
WP_000565498.1|2147038_2147446_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114341.1|2147442_2147847_-	HK97 gp10 family phage protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
WP_000755150.1|2147843_2148206_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|2148189_2148474_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238242.1|2148486_2148747_-	hypothetical protein	NA	A0A0H3U504	Staphylococcus_phage	98.8	1.4e-41
WP_000154568.1|2148766_2149912_-|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	99.7	7.3e-215
WP_000861911.1|2149934_2150672_-|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
WP_000025268.1|2150655_2151819_-|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
WP_000625096.1|2151834_2153496_-|terminase	terminase large subunit	terminase	A0A075M4D3	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|2153492_2153837_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988332.1|2153967_2154267_-	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
WP_000590122.1|2154498_2154915_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_001557462.1|2154942_2155143_-	DUF1514 family protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000595265.1|2155142_2155292_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000195784.1|2155288_2155495_-	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_001282077.1|2155491_2155737_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
WP_000185693.1|2155773_2156310_-	dUTP diphosphatase	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001065108.1|2156306_2156552_-	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000178987.1|2156566_2156815_-	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_000111491.1|2156811_2157069_-	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000101279.1|2157068_2157440_-	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	1.4e-50
WP_000401969.1|2157452_2157857_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000338528.1|2157865_2158084_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000148333.1|2158090_2158984_-	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000934759.1|2159013_2159484_-	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_064135358.1|2159484_2160102_-	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000180600.1|2160182_2161103_-	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	100.0	5.1e-166
WP_000700554.1|2161104_2163048_-	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
WP_001205732.1|2163056_2163320_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291510.1|2163328_2163589_-	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_000165371.1|2163593_2163896_-	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000048129.1|2163990_2164152_-	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_001120201.1|2164148_2164472_-	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000762521.1|2164526_2164907_+	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001148862.1|2164893_2165091_-	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_001148338.1|2165106_2165856_-	phage antirepressor KilAC domain-containing protein	NA	B7T097	Staphylococcus_virus	99.6	3.4e-136
WP_000772137.1|2165912_2166122_+	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_000939495.1|2166114_2166255_-	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000435360.1|2166269_2166713_-	hypothetical protein	NA	W5R971	Staphylococcus_phage	100.0	1.5e-75
WP_000639923.1|2166725_2166968_-	DUF739 family protein	NA	A0A1X9H035	Staphylococcus_phage	100.0	1.6e-39
WP_001083975.1|2167131_2167848_+	helix-turn-helix domain-containing protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
WP_001557601.1|2167859_2168714_+	HIRAN domain-containing protein	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
WP_000345949.1|2168787_2168934_+	hypothetical protein	NA	A0A1X9H032	Staphylococcus_phage	100.0	3.3e-19
WP_000109189.1|2168930_2169116_+	hypothetical protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
WP_000705245.1|2169186_2169369_+	hypothetical protein	NA	A0A0H3U4Z4	Staphylococcus_phage	96.7	6.9e-27
WP_001549185.1|2169447_2170161_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
WP_000857200.1|2170351_2171389_+|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	99.7	2.2e-178
WP_000595392.1|2172507_2173524_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791411.1|2173545_2174601_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000206625.1|2175036_2176260_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045079.1|2176703_2178011_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000240642.1|2178550_2180167_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2180242_2180527_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000197630.1|2180701_2181445_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
2183731:2183755	attR	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
>prophage 1
NC_009619	Staphylococcus aureus subsp. aureus JH1 plasmid pSJH101, complete sequence	30429	7085	14158	30429	transposase	Staphylococcus_phage(50.0%)	6	NA	NA
WP_001105984.1|7085_7760_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	3.8e-126
WP_000393259.1|8069_8462_+	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_001028144.1|8462_9902_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_001105984.1|10443_11118_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	3.8e-126
WP_000360133.1|11227_12688_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	36.1	1.4e-72
WP_000097595.1|12751_14158_-	NADP-dependent phosphogluconate dehydrogenase	NA	A0A0P0C6S9	Ostreococcus_lucimarinus_virus	29.0	2.0e-41
