The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009708	Yersinia pseudotuberculosis IP 31758, complete sequence	4723306	889747	965217	4723306	transposase,plate	uncultured_Caudovirales_phage(30.0%)	59	NA	NA
WP_012104584.1|889747_891100_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_012104585.1|891096_891783_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_012104586.1|891782_893519_+	OmpA family protein	NA	NA	NA	NA	NA
WP_002210014.1|893522_894014_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_012104587.1|894307_896956_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	31.6	2.8e-92
WP_012104588.1|896952_899301_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	31.2	5.0e-16
WP_012104589.1|899315_901538_+	hydroxyethylthiazole kinase	NA	NA	NA	NA	NA
WP_054878305.1|901538_902021_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002216110.1|902118_902313_+	hypothetical protein	NA	NA	NA	NA	NA
WP_144243028.1|903101_903302_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012104590.1|904298_906596_+	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_002210008.1|906582_907350_+	hypothetical protein	NA	NA	NA	NA	NA
WP_115027165.1|907445_908142_+|transposase	IS1-like element ISYps7 family transposase	transposase	A0A0U2RK18	Escherichia_phage	48.5	3.7e-60
WP_041175740.1|908751_909381_+	DUF2345 domain-containing protein	NA	NA	NA	NA	NA
WP_012104592.1|910171_910459_-	helix-turn-helix transcriptional regulator	NA	A0A2I6TC97	Escherichia_phage	45.9	1.4e-13
WP_012104593.1|910445_910769_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	O64357	Escherichia_phage	48.0	2.1e-18
WP_012104594.1|910968_911835_-	DUF4942 domain-containing protein	NA	NA	NA	NA	NA
WP_012104595.1|911930_912251_-	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA	NA
WP_012104596.1|912262_912619_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012104597.1|912674_913007_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041175841.1|913000_913474_-	DNA repair protein RadC	NA	NA	NA	NA	NA
WP_012104600.1|913505_913937_-	antirestriction protein	NA	A9J566	Pseudomonas_phage	31.9	2.5e-14
WP_012104601.1|914064_914325_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012104602.1|914324_915146_-	DUF945 domain-containing protein	NA	K4F5L3	Cronobacter_phage	37.8	9.8e-44
WP_012104604.1|915242_915710_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012104605.1|915813_916350_-	DUF4339 domain-containing protein	NA	NA	NA	NA	NA
WP_012104606.1|916472_917093_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012104607.1|917098_917800_-	WYL domain-containing protein	NA	NA	NA	NA	NA
WP_012104608.1|918012_918888_-	GTPase family protein	NA	NA	NA	NA	NA
WP_012104609.1|918995_919883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012104611.1|921172_921802_+	inovirus Gp2 family protein	NA	NA	NA	NA	NA
WP_012104612.1|921908_922118_+	AlpA family transcriptional regulator	NA	NA	NA	NA	NA
WP_012104616.1|923028_923625_+	hypothetical protein	NA	NA	NA	NA	NA
WP_080869065.1|924046_924703_+	inovirus Gp2 family protein	NA	NA	NA	NA	NA
WP_012104619.1|926035_927595_+	recombinase family protein	NA	A0A0N9RZT8	Staphylococcus_phage	28.8	1.3e-12
WP_113773015.1|927612_928482_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_012104621.1|928474_929359_+	ParB N-terminal domain-containing protein	NA	NA	NA	NA	NA
WP_041175845.1|931613_931844_-	PerC family transcriptional regulator	NA	NA	NA	NA	NA
WP_012104625.1|932853_933354_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_012104626.1|933398_934952_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_012104627.1|935077_936430_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_012104628.1|936426_937113_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_012104629.1|937112_938834_+	OmpA family protein	NA	NA	NA	NA	NA
WP_004877984.1|938847_939339_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_012104631.1|942530_945029_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.5	2.1e-17
WP_012104632.1|945146_946418_+	hypothetical protein	NA	NA	NA	NA	NA
WP_032467135.1|946421_946817_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012104633.1|947131_949834_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.5	4.0e-17
WP_011192084.1|949836_950253_+	DUF4431 domain-containing protein	NA	NA	NA	NA	NA
WP_012104636.1|952013_952532_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012104638.1|953311_954544_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012104639.1|954540_957963_+	type VI secretion system membrane subunit	NA	NA	NA	NA	NA
WP_012104640.1|958004_959609_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_012104641.1|959626_960685_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
WP_002211939.1|960699_961155_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012104643.1|961399_963163_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_012104644.1|963126_964212_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_012104645.1|964186_964768_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_012104646.1|964767_965217_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
>prophage 2
NC_009708	Yersinia pseudotuberculosis IP 31758, complete sequence	4723306	1871422	1946061	4723306	coat,transposase,protease,tRNA	uncultured_Caudovirales_phage(20.0%)	59	NA	NA
WP_012104985.1|1871422_1872538_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
WP_012104986.1|1872724_1873171_-	NUDIX hydrolase	NA	NA	NA	NA	NA
WP_012104987.1|1873163_1873790_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
WP_002210910.1|1873920_1875174_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	90.7	1.8e-20
WP_002210909.1|1875319_1876363_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
WP_002210908.1|1876622_1876883_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012104988.1|1877002_1878583_-	PAS domain-containing protein	NA	A0A1B0V854	Salmonella_phage	50.7	2.5e-35
WP_012104989.1|1879502_1880360_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002227977.1|1880519_1880903_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_012104990.1|1880960_1881128_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011192581.1|1881434_1882760_+	AppA family phytase/histidine-type acid phosphatase	NA	NA	NA	NA	NA
WP_002210902.1|1883075_1883279_-	putative selenium delivery protein YdfZ	NA	J9Q802	Salmonella_phage	44.6	9.8e-06
WP_012104991.1|1883581_1884481_-	Kdo hydroxylase family protein	NA	NA	NA	NA	NA
WP_002210900.1|1884572_1885022_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
WP_002214045.1|1885482_1886016_-	YlaC family protein	NA	NA	NA	NA	NA
WP_012104993.1|1886299_1887310_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
WP_012104994.1|1887717_1890918_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	61.9	0.0e+00
WP_002210893.1|1891458_1891671_+	transcription antiterminator/RNA stability regulator CspE	NA	A0A1W6JNX5	Morganella_phage	80.0	2.0e-25
WP_002210892.1|1891885_1892077_+	protein DsrB	NA	NA	NA	NA	NA
WP_012104995.1|1892259_1893999_-	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	33.7	9.7e-09
WP_011192576.1|1895124_1895823_+	MgtC family protein	NA	G3MA03	Bacillus_virus	39.3	6.2e-15
WP_012104996.1|1896227_1898927_+	magnesium-translocating P-type ATPase	NA	M1HM40	Paramecium_bursaria_Chlorella_virus	25.4	1.9e-43
WP_011192574.1|1900114_1900465_+	flagellar transcriptional regulator FlhD	NA	NA	NA	NA	NA
WP_002210889.1|1900468_1901050_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
WP_011192573.1|1901254_1902142_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
WP_012104998.1|1902138_1903440_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
WP_041175758.1|1903456_1905604_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
WP_011192570.1|1905766_1906264_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
WP_012105000.1|1906883_1909748_+	DUF2339 domain-containing protein	NA	NA	NA	NA	NA
WP_002214064.1|1909816_1910518_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011192568.1|1910758_1912432_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	34.7	1.5e-11
WP_002220817.1|1912615_1914226_+	Tar ligand binding domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	32.4	2.3e-12
WP_002214065.1|1914398_1915271_+	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA	NA
WP_002210874.1|1915270_1916320_+	chemotaxis response regulator protein-glutamate methylesterase	NA	Q56AR1	Bacillus_thuringiensis_phage	32.0	6.1e-06
WP_002210873.1|1916420_1916810_+	chemotaxis response regulator CheY	NA	A0A2K9L4R0	Tupanvirus	32.3	1.3e-06
WP_002210872.1|1916819_1917464_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
WP_011192565.1|1918027_1918792_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A076YN96	Rhizobium_phage	27.2	1.9e-09
WP_012105002.1|1919148_1921791_+	YadA-like family protein	NA	NA	NA	NA	NA
WP_012105003.1|1921890_1922844_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002210868.1|1923461_1924691_-	alanine racemase	NA	NA	NA	NA	NA
WP_002210867.1|1925092_1925287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002210865.1|1925835_1926084_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002210864.1|1926476_1927733_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_002210862.1|1927887_1928121_+	hypothetical protein	NA	NA	NA	NA	NA
WP_002215943.1|1928908_1929298_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
WP_002210859.1|1929407_1929647_-	YebV family protein	NA	NA	NA	NA	NA
WP_011192561.1|1929854_1930844_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_012105004.1|1931049_1933497_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_012105005.1|1933566_1934319_-	molecular chaperone	NA	NA	NA	NA	NA
WP_002216611.1|1934349_1934907_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002216613.1|1934927_1935458_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_002210852.1|1935463_1936018_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
WP_012105006.1|1936498_1939150_-	PqiB family protein	NA	NA	NA	NA	NA
WP_012105007.1|1939118_1940366_-	membrane integrity lipid transport subunit YebS	NA	NA	NA	NA	NA
WP_002210850.1|1940597_1941095_+	GAF domain-containing protein	NA	NA	NA	NA	NA
WP_002210849.1|1941190_1941904_+	RNA chaperone ProQ	NA	NA	NA	NA	NA
WP_012105008.1|1941923_1943996_+	carboxy terminal-processing peptidase	NA	A0A0R6PIZ1	Moraxella_phage	34.8	5.2e-86
WP_002213775.1|1944189_1944648_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_002210847.1|1945179_1946061_+|protease	protease HtpX	protease	NA	NA	NA	NA
>prophage 3
NC_009708	Yersinia pseudotuberculosis IP 31758, complete sequence	4723306	2506163	2556969	4723306	tail,head,plate,terminase,integrase	Pectobacterium_phage(50.0%)	67	2516205:2516264	2557040:2557163
WP_002213209.1|2506163_2506454_-	BrnA antitoxin family protein	NA	K4NZP3	Burkholderia_phage	39.4	1.8e-05
WP_002213211.1|2506841_2507096_+|plate	phage baseplate assembly protein V	plate	F1BUP5	Erwinia_phage	62.5	1.1e-17
WP_002213212.1|2507092_2507392_+	GPW/gp25 family protein	NA	A0A218M4K8	Erwinia_phage	64.9	2.6e-23
WP_002215413.1|2507408_2507696_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012105201.1|2508130_2508649_+	DUF2778 domain-containing protein	NA	NA	NA	NA	NA
WP_012105202.1|2509053_2510223_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	79.5	1.1e-178
WP_012105203.1|2510234_2510750_+|tail	phage major tail tube protein	tail	A0A218M4J0	Erwinia_phage	67.4	2.9e-62
WP_011192297.1|2510803_2511151_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	51.6	8.6e-18
WP_071819140.1|2511165_2511285_+|tail	GpE family phage tail protein	tail	NA	NA	NA	NA
WP_012105204.1|2514205_2514670_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	57.5	7.7e-46
WP_012105205.1|2514666_2515761_+	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	65.7	8.5e-128
WP_012105206.1|2515835_2516051_+	ogr/Delta-like zinc finger family protein	NA	S4TNZ3	Salmonella_phage	60.6	1.1e-18
2516205:2516264	attL	ACAAAAAAACCGCCTCTCGGCGGTTAACGACATACTCGTACTACTTTGTTTTACTTAGAA	NA	NA	NA	NA
WP_012105207.1|2516835_2517270_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012105208.1|2517281_2517851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012105209.1|2518390_2519047_-|tail	tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	41.7	2.9e-30
WP_080869059.1|2519046_2519544_-|tail	phage tail protein	tail	A0A2I8TVA9	Erwinia_phage	45.9	1.7e-27
WP_012105211.1|2520266_2520911_-	DUF2612 domain-containing protein	NA	H9C1B4	Pectobacterium_phage	48.0	9.4e-42
WP_012105212.1|2520903_2522103_-|plate	baseplate J/gp47 family protein	plate	H9C1B3	Pectobacterium_phage	64.5	1.5e-146
WP_012105213.1|2522102_2522453_-	hypothetical protein	NA	H9C1B2	Pectobacterium_phage	61.7	4.6e-35
WP_012105214.1|2522526_2523204_-	hypothetical protein	NA	H9C1B1	Pectobacterium_phage	56.0	4.7e-68
WP_012105215.1|2523211_2524105_-	hypothetical protein	NA	H9C1B0	Pectobacterium_phage	47.3	1.2e-79
WP_012105216.1|2524097_2524388_-	hypothetical protein	NA	H9C1A9	Pectobacterium_phage	60.6	1.2e-25
WP_012105217.1|2524387_2525056_-	hypothetical protein	NA	H9C1A8	Pectobacterium_phage	45.2	1.1e-34
WP_129192660.1|2525055_2525646_-	glycoside hydrolase family 104 protein	NA	H9C1A7	Pectobacterium_phage	52.9	1.5e-46
WP_041175770.1|2527042_2527549_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041175771.1|2527622_2527868_-	Arc family DNA-binding protein	NA	A0A0M5M1J2	Salmonella_phage	61.4	3.8e-20
WP_165285869.1|2527969_2528116_+	hypothetical protein	NA	A0A0M4S6R9	Salmonella_phage	60.4	5.2e-09
WP_012105221.1|2528181_2529087_+	ORF6N domain-containing protein	NA	G9L689	Escherichia_phage	63.7	6.3e-36
WP_012105223.1|2529908_2530559_-	hypothetical protein	NA	H6WRU8	Salmonella_phage	37.8	8.3e-30
WP_012105224.1|2530849_2531173_+	Arc family DNA-binding protein	NA	A0A0P0ZBD1	Stx2-converting_phage	46.6	3.1e-17
WP_012105225.1|2531254_2531710_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012105227.1|2531955_2532345_-	hypothetical protein	NA	H9C1A4	Pectobacterium_phage	55.5	4.8e-33
WP_012105228.1|2532347_2532752_-	hypothetical protein	NA	H9C1A3	Pectobacterium_phage	78.4	1.1e-53
WP_012105229.1|2532758_2533916_-	DUF3383 family protein	NA	H9C1A2	Pectobacterium_phage	74.8	8.9e-168
WP_012105230.1|2533899_2534460_-	hypothetical protein	NA	H9C1A1	Pectobacterium_phage	62.9	8.4e-55
WP_012105231.1|2534459_2534879_-	hypothetical protein	NA	H9C1A0	Pectobacterium_phage	73.6	1.1e-59
WP_012105233.1|2535537_2536737_-	DUF2213 domain-containing protein	NA	H9C194	Pectobacterium_phage	72.2	2.3e-126
WP_041175772.1|2536748_2537498_-|head	phage head morphogenesis protein	head	H9C193	Pectobacterium_phage	75.5	3.4e-104
WP_012105235.1|2537556_2538942_-	DUF1073 domain-containing protein	NA	H9C192	Pectobacterium_phage	70.2	2.0e-190
WP_012105236.1|2538944_2540588_-|terminase	phage terminase large subunit	terminase	H9C191	Pectobacterium_phage	84.3	7.9e-287
WP_012105237.1|2540714_2540954_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	63.3	5.2e-22
WP_012105238.1|2540943_2541228_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	76.6	6.4e-35
WP_012105239.1|2541238_2542255_-|terminase	terminase small subunit	terminase	I6X6R5	Burkholderia_virus	43.4	2.5e-41
WP_012105240.1|2542258_2542519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105241.1|2542521_2543136_-	hypothetical protein	NA	C9E2P8	Enterococcus_phage	61.7	1.8e-66
WP_012105242.1|2543132_2543642_-	ParB N-terminal domain-containing protein	NA	A0A0R6PD10	Moraxella_phage	50.0	6.7e-35
WP_012105244.1|2544100_2544319_+	DUF2158 domain-containing protein	NA	NA	NA	NA	NA
WP_041175868.1|2544366_2544603_+	hypothetical protein	NA	NA	NA	NA	NA
WP_041175773.1|2544819_2545089_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041175774.1|2545650_2545866_-	peptidoglycan-binding protein LysM	NA	Q9ZWW2	Enterobacteria_phage	50.0	2.5e-07
WP_012105248.1|2546145_2546373_+	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
WP_012105249.1|2546396_2546750_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
WP_012105250.1|2546908_2547355_-	antitermination protein	NA	S5M7R9	Escherichia_phage	52.8	8.8e-31
WP_041175775.1|2547351_2547636_-	DUF1364 domain-containing protein	NA	H9C174	Pectobacterium_phage	73.4	1.8e-34
WP_012105251.1|2547644_2548238_-	DUF1367 family protein	NA	H9C173	Pectobacterium_phage	54.8	2.4e-60
WP_071838965.1|2549025_2549505_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_071838966.1|2549568_2549751_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105252.1|2549764_2550505_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105254.1|2550938_2551181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105255.1|2551270_2552644_-	replicative DNA helicase	NA	Q8HA30	Enterobacteria_phage	47.9	2.9e-109
WP_012105256.1|2552640_2553684_-	hypothetical protein	NA	A0A1W6JNI1	Staphylococcus_phage	36.2	9.5e-28
WP_041175776.1|2553686_2553911_-	hypothetical protein	NA	H9C163	Pectobacterium_phage	63.5	4.5e-20
WP_012105257.1|2553927_2554392_-	hypothetical protein	NA	H9C162	Pectobacterium_phage	53.1	5.9e-30
WP_012105258.1|2554425_2554632_-	Cro/Cl family transcriptional regulator	NA	H9C161	Pectobacterium_phage	68.3	2.3e-18
WP_181949711.1|2554723_2555386_+	helix-turn-helix domain-containing protein	NA	H9C160	Pectobacterium_phage	68.7	2.3e-83
WP_012105260.1|2555726_2555963_+	DUF4224 domain-containing protein	NA	H9C153	Pectobacterium_phage	46.5	1.0e-09
WP_012105261.1|2555952_2556969_+|integrase	tyrosine-type recombinase/integrase	integrase	H9C152	Pectobacterium_phage	68.3	1.2e-136
2557040:2557163	attR	ACAAAAAAACCGCCTCTCGGCGGTTAACGACATACTCGTACTACTTTGTTTTACTTAGAATATTTTCCATGGTGCCCGGGGCGGGACTTGAACCCGCACAGCCATAAGCCGAGGGATTTTAAAT	NA	NA	NA	NA
>prophage 4
NC_009708	Yersinia pseudotuberculosis IP 31758, complete sequence	4723306	2809544	2875846	4723306	transposase,plate	uncultured_Caudovirales_phage(14.29%)	50	NA	NA
WP_002211943.1|2809544_2809997_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_012105342.1|2809996_2810578_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_012105343.1|2810552_2811638_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_012105344.1|2811601_2813365_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_012105345.1|2813456_2813915_-	DUF943 family protein	NA	NA	NA	NA	NA
WP_012105346.1|2813917_2815033_-	DUF3289 family protein	NA	NA	NA	NA	NA
WP_012105347.1|2815050_2816652_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_049756384.1|2816696_2817482_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105349.1|2817530_2820572_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105350.1|2820653_2824076_-	type VI secretion system membrane subunit	NA	NA	NA	NA	NA
WP_012105351.1|2824072_2825305_-	hypothetical protein	NA	NA	NA	NA	NA
WP_033851509.1|2827469_2828117_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105355.1|2829753_2830014_-	DUF2345 domain-containing protein	NA	NA	NA	NA	NA
WP_002211930.1|2830167_2830941_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105356.1|2830937_2833238_-	M23 family metallopeptidase	NA	NA	NA	NA	NA
WP_012105357.1|2833253_2835602_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.3	3.1e-18
WP_012105358.1|2835604_2838247_-	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	32.0	7.4e-93
WP_002210014.1|2838540_2839032_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
WP_012105359.1|2839035_2840772_-	OmpA family protein	NA	NA	NA	NA	NA
WP_012105360.1|2840771_2841458_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_002222847.1|2841454_2842807_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_012104583.1|2842818_2844369_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_002211662.1|2844411_2844912_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_002213016.1|2845900_2846749_-	ACP S-malonyltransferase	NA	NA	NA	NA	NA
WP_002213017.1|2846847_2847096_-	acyl carrier protein	NA	NA	NA	NA	NA
WP_002228570.1|2847133_2847574_-	lipocalin-like domain-containing protein	NA	NA	NA	NA	NA
WP_012105361.1|2847660_2848449_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_002213025.1|2848451_2849204_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_002213026.1|2849205_2849925_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
WP_002213028.1|2849917_2851156_-	hydroxymethylglutaryl-CoA synthase family protein	NA	NA	NA	NA	NA
WP_012105362.1|2851171_2851909_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_012105363.1|2851910_2853194_-	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	NA	NA	NA	NA	NA
WP_002213034.1|2853183_2853708_-	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
WP_002213036.1|2853971_2854190_-	hypothetical protein	NA	NA	NA	NA	NA
WP_002213038.1|2854920_2855667_+	SDR family oxidoreductase	NA	F2NZ40	Diadromus_pulchellus_ascovirus	31.4	3.3e-14
WP_002213046.1|2861560_2861890_+	sulfurtransferase TusE	NA	NA	NA	NA	NA
WP_002213049.1|2861941_2862220_-	acylphosphatase	NA	NA	NA	NA	NA
WP_012105365.1|2862313_2863504_+	23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI	NA	W6LLI2	Streptococcus_phage	27.8	2.7e-26
WP_002213054.1|2863564_2863882_+	heat shock protein HspQ	NA	NA	NA	NA	NA
WP_012105366.1|2863990_2864407_-	CoA-binding protein	NA	NA	NA	NA	NA
WP_002213058.1|2864722_2865403_+	DUF2057 family protein	NA	NA	NA	NA	NA
WP_002213060.1|2865581_2866046_+	methylglyoxal synthase	NA	NA	NA	NA	NA
WP_011192072.1|2866106_2868161_-	DNA helicase IV	NA	A7KV33	Bacillus_phage	25.8	5.7e-16
WP_002213062.1|2868354_2868801_+	YccF domain-containing protein	NA	NA	NA	NA	NA
WP_011192070.1|2868830_2870969_+	TIGR01666 family membrane protein	NA	NA	NA	NA	NA
WP_002213064.1|2871070_2871706_-	TfoX/Sxy family DNA transformation protein	NA	NA	NA	NA	NA
WP_011192069.1|2871934_2872441_+	cell division inhibitor SulA	NA	NA	NA	NA	NA
WP_006250222.1|2872675_2873884_-|transposase	IS4-like element ISVsa5 family transposase	transposase	Q9E8P4	Bluetongue_virus	99.8	3.0e-235
WP_002213066.1|2874136_2875198_+	porin OmpA	NA	NA	NA	NA	NA
WP_002213775.1|2875387_2875846_+|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
>prophage 5
NC_009708	Yersinia pseudotuberculosis IP 31758, complete sequence	4723306	3085770	3106470	4723306	plate,tail	Pseudomonas_phage(20.0%)	22	NA	NA
WP_002208845.1|3085770_3086550_-|tail	tail fiber protein	tail	Q9MCR6	Enterobacteria_phage	52.4	7.1e-52
WP_012105434.1|3086646_3087249_-	YmfQ family protein	NA	A0A2P9JZK7	Alteromonadaceae_phage	38.6	2.0e-33
WP_011192005.1|3087245_3088382_-|plate	baseplate J/gp47 family protein	plate	B5TK75	Pseudomonas_phage	30.5	3.5e-31
WP_012105435.1|3088385_3088841_-	phage GP46 family protein	NA	A0A0C4UR04	Shigella_phage	43.8	4.3e-17
WP_002215460.1|3088837_3089434_-|plate	phage baseplate assembly protein	plate	NA	NA	NA	NA
WP_012105436.1|3089449_3090505_-|tail	tail protein	tail	M1PVV2	Vibrio_phage	28.1	1.0e-37
WP_012105437.1|3090501_3091908_-	DNA circularization protein	NA	Q8SBG8	Shigella_phage	33.7	2.1e-17
WP_012105438.1|3092189_3093683_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105439.1|3093803_3094103_-|tail	phage tail assembly protein	tail	NA	NA	NA	NA
WP_002208855.1|3094104_3094473_-|tail	phage tail tube protein	tail	NA	NA	NA	NA
WP_012105440.1|3094494_3096003_-|tail	phage tail sheath subtilisin-like domain-containing protein	tail	B5TK67	Pseudomonas_phage	44.6	1.3e-105
WP_012105441.1|3095999_3096194_-	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	60.4	3.5e-08
WP_002208858.1|3096198_3096816_-	ATP-binding protein	NA	NA	NA	NA	NA
WP_002208859.1|3096861_3097152_-	hypothetical protein	NA	H6WRZ3	Salmonella_phage	46.3	7.7e-12
WP_002208860.1|3097409_3098204_-	hydroxypyruvate isomerase family protein	NA	NA	NA	NA	NA
WP_002208861.1|3098179_3098992_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
WP_032466639.1|3098994_3099666_-	aldolase	NA	A0A077SK32	Escherichia_phage	54.9	1.3e-57
WP_012105443.1|3099722_3101027_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	46.2	2.0e-91
WP_002215470.1|3101237_3101717_-	antitermination protein Q	NA	S5M7R9	Escherichia_phage	61.0	2.3e-37
WP_002208864.1|3101990_3102713_+	LexA family transcriptional regulator	NA	F1C599	Cronobacter_phage	51.9	2.2e-63
WP_002208866.1|3102918_3103161_+	DinI family protein	NA	K7PKR6	Enterobacteria_phage	65.0	6.9e-22
WP_012105444.1|3104682_3106470_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.5	4.0e-10
>prophage 6
NC_009708	Yersinia pseudotuberculosis IP 31758, complete sequence	4723306	3304939	3317088	4723306		Burkholderia_phage(66.67%)	14	NA	NA
WP_012105506.1|3304939_3306721_-	Ig-like domain-containing protein	NA	H9C1B7	Pectobacterium_phage	59.4	2.5e-193
WP_012303831.1|3306713_3306935_-	hypothetical protein	NA	NA	NA	NA	NA
WP_129192738.1|3306938_3308747_-	DUF2612 domain-containing protein	NA	Q6IWQ4	Burkholderia_phage	36.8	1.5e-33
WP_012105508.1|3308806_3309634_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105509.1|3309686_3310886_-	hypothetical protein	NA	Q6IWQ3	Burkholderia_phage	46.0	3.8e-81
WP_012105510.1|3310869_3311229_-	hypothetical protein	NA	Q6IWQ2	Burkholderia_phage	47.8	4.3e-20
WP_012105511.1|3311225_3311903_-	hypothetical protein	NA	Q6IWQ1	Burkholderia_phage	43.2	1.9e-40
WP_012105512.1|3311884_3312724_-	hypothetical protein	NA	Q6IWQ0	Burkholderia_phage	42.4	9.0e-53
WP_012105513.1|3312727_3313030_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105514.1|3313031_3313556_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105515.1|3313555_3314104_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012105516.1|3314168_3314840_-	DUF2213 domain-containing protein	NA	Q6IWU4	Burkholderia_phage	52.0	1.6e-39
WP_012105518.1|3315580_3316189_-	hypothetical protein	NA	K7PHD7	Enterobacteria_phage	50.0	1.0e-42
WP_012105520.1|3316569_3317088_-	pentapeptide repeat-containing protein	NA	A0A220NQW1	Salmonella_phage	64.7	1.3e-33
>prophage 7
NC_009708	Yersinia pseudotuberculosis IP 31758, complete sequence	4723306	3820474	3870398	4723306	transposase,plate	Saccharomonospora_phage(22.22%)	31	NA	NA
WP_002213759.1|3820474_3820933_-|transposase	IS200/IS605-like element IS1541A family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_011191729.1|3821116_3822127_-	catabolite repressor/activator	NA	NA	NA	NA	NA
WP_002210448.1|3822577_3823072_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
WP_002228103.1|3823074_3824802_-	acetolactate synthase 3 large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.4	7.8e-59
WP_012105674.1|3825261_3827067_-	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.2	6.1e-38
WP_002216434.1|3827619_3828576_-	transcriptional regulator LeuO	NA	NA	NA	NA	NA
WP_002210453.1|3829790_3831353_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
WP_012105676.1|3831355_3832447_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
WP_002210455.1|3832448_3833879_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
WP_012105677.1|3833893_3834496_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
WP_002224086.1|3834736_3835918_-	MFS transporter	NA	NA	NA	NA	NA
WP_011191725.1|3836649_3838311_+	HTH-type transcriptional regulator SgrR	NA	NA	NA	NA	NA
WP_002213775.1|3839639_3840098_-|transposase	IS200/IS605-like element IS1541B family transposase	transposase	I4AZI8	Saccharomonospora_phage	31.5	8.5e-13
WP_011191722.1|3840929_3842537_+	thiamine/thiamine pyrophosphate ABC transporter permease ThiP	NA	NA	NA	NA	NA
WP_012105678.1|3842523_3843234_+	thiamine ABC transporter ATP-binding protein ThiQ	NA	G3M9Y6	Bacillus_virus	34.6	4.5e-21
WP_002210465.1|3843302_3844070_-	DedA family protein	NA	NA	NA	NA	NA
WP_012105679.1|3844265_3846635_+	DNA polymerase II	NA	A0A0P0YM26	Yellowstone_lake_phycodnavirus	25.5	1.5e-31
WP_011191719.1|3847095_3850002_+	RNA polymerase-associated protein RapA	NA	A0A1B1IUI1	uncultured_Mediterranean_phage	37.1	6.8e-23
WP_002210468.1|3850257_3850611_-	hypothetical protein	NA	NA	NA	NA	NA
WP_011191718.1|3854135_3855746_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_002210470.1|3855742_3857098_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_011191717.1|3857217_3857709_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_002214737.1|3857701_3858067_-	DUF4150 domain-containing protein	NA	NA	NA	NA	NA
WP_002210473.1|3858072_3858690_-	DUF3540 domain-containing protein	NA	NA	NA	NA	NA
WP_002214739.1|3858682_3859786_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_002224087.1|3859811_3862031_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
WP_012105682.1|3862043_3864392_-	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	32.9	2.1e-14
WP_002210475.1|3864495_3867084_-	type VI secretion system ATPase TssH	NA	A0A248SJW6	Salicola_phage	28.7	1.9e-77
WP_012105683.1|3867101_3868085_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_011191714.1|3868077_3869922_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_002210478.1|3869954_3870398_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
