The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009512	Pseudomonas putida F1, complete genome	5959964	1117427	1125206	5959964		Thermobifida_phage(16.67%)	10	NA	NA
WP_003255139.1|1117427_1118282_-	RNase adapter RapZ	NA	A0A0R8VB27	Thermobifida_phage	31.9	2.4e-08
WP_003255137.1|1118284_1118749_-	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA	NA
WP_003255135.1|1118761_1119070_-	ribosome-associated translation inhibitor RaiA	NA	A0A0K1LP60	Escherichia_phage	34.1	4.4e-05
WP_003255133.1|1119149_1120643_-	RNA polymerase factor sigma-54	NA	NA	NA	NA	NA
WP_003255132.1|1120818_1121544_-	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.5	8.4e-23
WP_003255131.1|1121544_1122069_-	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
WP_012051313.1|1122055_1122628_-	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
WP_012051314.1|1122636_1123161_-	HAD family hydrolase	NA	A0A140XBD6	Dickeya_phage	48.1	6.9e-27
WP_012051315.1|1123173_1124148_-	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	32.8	1.0e-36
WP_012051316.1|1124396_1125206_+	ATP-binding cassette domain-containing protein	NA	G9BWD6	Planktothrix_phage	33.2	1.0e-24
>prophage 2
NC_009512	Pseudomonas putida F1, complete genome	5959964	2104853	2115477	5959964	tRNA	uncultured_Caudovirales_phage(66.67%)	11	NA	NA
WP_012051829.1|2104853_2106134_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.5	1.5e-94
WP_012051830.1|2106134_2107526_+	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
WP_004576098.1|2107631_2108591_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
WP_010954805.1|2108685_2109687_-	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	80.8	3.6e-157
WP_012051831.1|2109683_2110019_-	TusE/DsrC/DsvC family sulfur relay protein	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	74.8	2.2e-42
WP_003251193.1|2110015_2110312_-	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	58.6	2.0e-23
WP_012051832.1|2110311_2110671_-	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	65.8	1.9e-36
WP_003251188.1|2110672_2111065_-	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	79.8	1.1e-53
WP_003251186.1|2111160_2112540_-	uracil-xanthine permease	NA	H9YQ34	environmental_Halophage	51.1	1.6e-27
WP_003251184.1|2112854_2113526_-	Bax inhibitor-1/YccA family protein	NA	A0A2H4JFM9	uncultured_Caudovirales_phage	91.0	2.1e-105
WP_012051834.1|2114709_2115477_+	3-oxoacyl-ACP reductase FabG	NA	A0A0M4JSW6	Mollivirus	23.7	3.3e-09
>prophage 3
NC_009512	Pseudomonas putida F1, complete genome	5959964	2194394	2198779	5959964		uncultured_Caudovirales_phage(50.0%)	8	NA	NA
WP_041168400.1|2194394_2194778_-	hypothetical protein	NA	A0A0U4JNY7	Pseudomonas_phage	48.1	1.3e-27
WP_042161499.1|2194880_2195150_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012051889.1|2195196_2195721_-	hypothetical protein	NA	A0A2H4JAQ1	uncultured_Caudovirales_phage	55.6	3.8e-09
WP_012051890.1|2195695_2196061_-	hypothetical protein	NA	A0A2H4J0L9	uncultured_Caudovirales_phage	87.6	2.1e-54
WP_012051891.1|2196142_2196685_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012051892.1|2196681_2197449_-	recombinase	NA	A0A0M3LPU0	Mannheimia_phage	28.7	8.3e-13
WP_012051893.1|2197445_2198060_-	single-stranded DNA-binding protein	NA	A0A1B0VMB2	Pseudomonas_phage	59.8	1.3e-56
WP_014756159.1|2198071_2198779_+	hypothetical protein	NA	A0A2H4J107	uncultured_Caudovirales_phage	44.8	2.6e-08
>prophage 4
NC_009512	Pseudomonas putida F1, complete genome	5959964	2957998	3031703	5959964	plate,protease,transposase	uncultured_Caudovirales_phage(22.22%)	55	NA	NA
WP_004577666.1|2957998_2958949_-|transposase	IS110 family transposase	transposase	Q75QL1	Wolbachia_phage	36.7	4.6e-29
WP_012052391.1|2959483_2962564_-	error-prone DNA polymerase	NA	A0A0K1Y906	Streptomyces_phage	28.6	1.4e-103
WP_012052392.1|2962560_2963979_-	DNA polymerase Y family protein	NA	NA	NA	NA	NA
WP_012052393.1|2963985_2964606_-	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA	NA
WP_012052394.1|2964605_2965223_-	repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	40.3	1.4e-07
WP_012052395.1|2965314_2965998_+	HAD family phosphatase	NA	NA	NA	NA	NA
WP_012052396.1|2965994_2967380_-	aromatic acid/H+ symport family MFS transporter	NA	NA	NA	NA	NA
WP_004374204.1|2967424_2967751_-	NIPSNAP family protein	NA	NA	NA	NA	NA
WP_012052397.1|2967750_2969466_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
WP_012052398.1|2969462_2970290_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
WP_012052399.1|2970466_2971339_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_004576295.1|2971416_2972190_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
WP_012052400.1|2972254_2973712_-	amidase	NA	NA	NA	NA	NA
WP_012052401.1|2973708_2975019_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	42.7	9.6e-86
WP_012052402.1|2975102_2976278_-	amidohydrolase	NA	NA	NA	NA	NA
WP_012052403.1|2976324_2977818_-	RHS repeat protein	NA	NA	NA	NA	NA
WP_012052405.1|2980932_2981529_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052406.1|2981533_2985736_-	type IV secretion protein Rhs	NA	A0A2H4JFP5	uncultured_Caudovirales_phage	42.9	3.6e-33
WP_003248404.1|2985742_2986210_-	DUF1795 domain-containing protein	NA	NA	NA	NA	NA
WP_012052407.1|2986244_2986829_-	DcrB-related protein	NA	NA	NA	NA	NA
WP_012052408.1|2986839_2988696_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	29.7	1.6e-65
WP_012052409.1|2989608_2990160_+	hypothetical protein	NA	NA	NA	NA	NA
WP_014756610.1|2990306_2990513_-	hypothetical protein	NA	NA	NA	NA	NA
WP_028697263.1|2990753_2991503_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003248358.1|2991567_2992107_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
WP_003248356.1|2992121_2993624_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
WP_003248355.1|2993650_2994133_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
WP_012052410.1|2994132_2995953_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
WP_012052411.1|2995916_2996987_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
WP_012052412.1|2996983_2999581_+	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	30.8	4.9e-89
WP_004576638.1|2999605_3000328_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
WP_003248343.1|3000324_3001668_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
WP_012052413.1|3001664_3002381_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
WP_012052414.1|3002411_3006215_+	ImcF domain-containing protein	NA	NA	NA	NA	NA
WP_012052415.1|3006211_3007120_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
WP_012052416.1|3007116_3009612_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
WP_012052417.1|3009755_3010274_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
WP_012052418.1|3010369_3011455_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
WP_012052419.1|3011622_3014139_+	excinuclease ABC subunit UvrA	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	35.0	1.1e-159
WP_012052420.1|3014223_3015873_+	MFS transporter	NA	NA	NA	NA	NA
WP_012052421.1|3015869_3017003_+	HlyD family secretion protein	NA	NA	NA	NA	NA
WP_012052422.1|3017106_3017709_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003248329.1|3017745_3018621_-	AEC family transporter	NA	NA	NA	NA	NA
WP_012052423.1|3019048_3020347_+	MFS transporter	NA	NA	NA	NA	NA
WP_003248325.1|3020428_3020737_+	hypothetical protein	NA	NA	NA	NA	NA
WP_003248323.1|3020786_3021338_+	YbhB/YbcL family Raf kinase inhibitor-like protein	NA	NA	NA	NA	NA
WP_003248320.1|3021892_3022954_+	3-deoxy-7-phosphoheptulonate synthase	NA	A0A1Z1LZD8	Serratia_phage	48.6	5.1e-85
WP_003248318.1|3023034_3023316_+	peptidyl-prolyl cis-trans isomerase	NA	NA	NA	NA	NA
WP_012052424.1|3023458_3025258_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_012052425.1|3025254_3026313_+	microcin C ABC transporter permease YejB	NA	NA	NA	NA	NA
WP_012052426.1|3026312_3027329_+	ABC transporter permease	NA	NA	NA	NA	NA
WP_012052427.1|3027388_3028771_+	AAA domain-containing protein	NA	NA	NA	NA	NA
WP_004576648.1|3028995_3030387_+	GntP family permease	NA	NA	NA	NA	NA
WP_012052428.1|3030397_3031168_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
WP_012052429.1|3031223_3031703_+|protease	serine protease inhibitor ecotin	protease	NA	NA	NA	NA
>prophage 5
NC_009512	Pseudomonas putida F1, complete genome	5959964	3414430	3422236	5959964		uncultured_Caudovirales_phage(57.14%)	10	NA	NA
WP_012052728.1|3414430_3415201_+	SDR family NAD(P)-dependent oxidoreductase	NA	Q56AQ6	Bacillus_thuringiensis_phage	41.1	4.3e-41
WP_012052729.1|3415296_3415989_+	DUF421 domain-containing protein	NA	NA	NA	NA	NA
WP_012052730.1|3416081_3416621_+	type 1 glutamine amidotransferase	NA	A0A0N7KVR4	Yellowstone_lake_phycodnavirus	34.9	1.7e-20
WP_010953640.1|3416677_3417202_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052732.1|3417396_3418254_+	glucose 1-dehydrogenase	NA	A0A2N9QUX2	Trichoplusia_ni_ascovirus	50.5	2.2e-70
WP_012052733.1|3418423_3418888_+	hemerythrin domain-containing protein	NA	NA	NA	NA	NA
WP_014756342.1|3419369_3419717_+	metalloregulator ArsR/SmtB family transcription factor	NA	A0A2H4J145	uncultured_Caudovirales_phage	61.9	1.7e-34
WP_012052736.1|3419738_3421022_+	arsenic transporter	NA	A0A2H4J144	uncultured_Caudovirales_phage	75.6	5.8e-176
WP_012052737.1|3421050_3421521_+	arsenate reductase ArsC	NA	A0A2H4J8A6	uncultured_Caudovirales_phage	69.2	5.7e-57
WP_012052738.1|3421534_3422236_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	79.0	3.2e-104
>prophage 6
NC_009512	Pseudomonas putida F1, complete genome	5959964	3754653	3828752	5959964	integrase,coat,head,tail,terminase	Pseudomonas_phage(44.44%)	96	3774050:3774075	3836589:3836614
WP_012052956.1|3754653_3755625_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_041168611.1|3755621_3757919_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
WP_012052958.1|3758027_3758804_-	molecular chaperone	NA	NA	NA	NA	NA
WP_012052959.1|3758844_3759348_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_012052960.1|3759351_3759885_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_012052961.1|3759903_3760440_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_041168483.1|3760470_3760998_-|coat	spore coat protein U domain-containing protein	coat	NA	NA	NA	NA
WP_012052963.1|3761265_3763512_+	GAF domain-containing protein	NA	Q8QNA6	Ectocarpus_siliculosus_virus	22.8	1.9e-20
WP_003250360.1|3763527_3763989_+	response regulator	NA	NA	NA	NA	NA
WP_012052964.1|3764002_3766390_+	response regulator	NA	Q8QNA2	Ectocarpus_siliculosus_virus	28.6	2.4e-10
WP_012052965.1|3766847_3767090_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012052966.1|3767222_3768296_+	cell division protein ZapE	NA	NA	NA	NA	NA
WP_012052967.1|3768399_3769626_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012052968.1|3769714_3771604_-	propionyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	28.8	3.1e-53
WP_004573884.1|3771784_3772651_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_012052969.1|3772624_3773779_-	HPP family protein	NA	NA	NA	NA	NA
3774050:3774075	attL	CCTGTGGGAGCGGCCTTGTGTCGCGA	NA	NA	NA	NA
WP_012052970.1|3774098_3775418_-	sensor histidine kinase	NA	NA	NA	NA	NA
WP_010953307.1|3775414_3776083_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_003250344.1|3776083_3776398_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
WP_003250340.1|3776397_3776706_-	peptidase	NA	NA	NA	NA	NA
WP_004573881.1|3776925_3778005_+	patatin-like phospholipase family protein	NA	NA	NA	NA	NA
WP_012052972.1|3778240_3779422_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A2H4J5F8	uncultured_Caudovirales_phage	93.8	6.6e-211
WP_012052973.1|3779407_3779701_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052974.1|3779697_3779991_-	hypothetical protein	NA	A0A2H4JER5	uncultured_Caudovirales_phage	68.0	1.6e-33
WP_012052975.1|3780064_3780289_-	hypothetical protein	NA	A0A2H4JG60	uncultured_Caudovirales_phage	82.4	5.9e-28
WP_041168484.1|3780613_3781120_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012052978.1|3782377_3782878_-	DUF2514 domain-containing protein	NA	A0A2H4J3Q6	uncultured_Caudovirales_phage	53.7	1.4e-32
WP_012052979.1|3782874_3783324_-	hypothetical protein	NA	A0A2R3UAM8	Myoviridae_environmental_samples	53.4	3.6e-32
WP_012052980.1|3783420_3784230_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052981.1|3784254_3786192_-	hypothetical protein	NA	A0A2H5BHG7	Acinetobacter_phage	29.0	6.1e-20
WP_012052982.1|3786247_3789301_-	hypothetical protein	NA	B5WZT8	Pseudomonas_phage	41.6	3.0e-223
WP_012052983.1|3789297_3789675_-	hypothetical protein	NA	B5WZT7	Pseudomonas_phage	44.1	3.6e-25
WP_012052984.1|3789677_3790157_-	DUF1833 family protein	NA	J7I404	Pseudomonas_phage	42.7	5.3e-26
WP_012052985.1|3790153_3790624_-	hypothetical protein	NA	A0A286S298	Klebsiella_phage	43.0	8.7e-21
WP_012052986.1|3790811_3793724_-|tail	tail length tape measure protein	tail	A0A2H4J9A1	uncultured_Caudovirales_phage	35.4	7.3e-102
WP_041168487.1|3794279_3794519_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052988.1|3794626_3795112_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052989.1|3795169_3796339_-	Ig domain-containing protein	NA	A0A2C9CX52	Yersinia_phage	55.3	4.5e-10
WP_012052990.1|3796398_3796806_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052991.1|3796802_3797189_-	hypothetical protein	NA	A0A059VF88	Pseudomonas_phage	51.6	2.9e-30
WP_012052992.1|3797191_3797572_-	hypothetical protein	NA	A0A059VA70	Pseudomonas_phage	52.8	2.8e-30
WP_012052993.1|3797575_3797968_-	hypothetical protein	NA	A0A0H5AUF0	Pseudomonas_phage	32.3	3.3e-05
WP_041168612.1|3798007_3798598_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052995.1|3798644_3799613_-	hypothetical protein	NA	R9TJ64	Synechococcus_phage	65.7	1.4e-113
WP_012052996.1|3799625_3800336_-	hypothetical protein	NA	A0A2H4J0Y0	uncultured_Caudovirales_phage	60.9	6.9e-38
WP_012052997.1|3800453_3801500_-|head	head morphogenesis protein	head	A0A1B0VMF3	Pseudomonas_phage	33.9	6.4e-48
WP_012052998.1|3801489_3802914_-	DUF4055 domain-containing protein	NA	A0A2H4J5M6	uncultured_Caudovirales_phage	36.8	3.5e-73
WP_012052999.1|3802922_3804224_-|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	59.3	2.7e-149
WP_012053000.1|3804210_3804672_-	DUF2280 domain-containing protein	NA	A0A0S2SY97	Pseudomonas_phage	85.9	1.3e-56
WP_041168488.1|3804703_3805300_-	hypothetical protein	NA	A0A0S2SYA5	Pseudomonas_phage	86.4	5.3e-100
WP_012053002.1|3805619_3806057_-	proteasome subunit beta	NA	A0A1B0VNC4	Pseudomonas_phage	54.9	2.0e-35
WP_041168489.1|3806053_3806293_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053004.1|3806502_3806739_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053005.1|3806745_3807015_-	hypothetical protein	NA	A0A1B0VME7	Pseudomonas_phage	58.8	1.1e-17
WP_012053006.1|3807014_3807326_-	hypothetical protein	NA	A0A1B0VME9	Pseudomonas_phage	50.5	2.9e-17
WP_012053007.1|3807735_3808281_-	hypothetical protein	NA	A0A0H5AWB8	Pseudomonas_phage	63.6	3.9e-57
WP_041168613.1|3808420_3809026_-	ninG protein	NA	A0A0U1VZM0	Pseudomonas_phage	55.8	1.8e-55
WP_012053009.1|3809022_3809421_-	NinB family protein	NA	A0A059VG13	Pseudomonas_phage	84.1	3.8e-62
WP_041168490.1|3809417_3809615_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053010.1|3809611_3809890_-	hypothetical protein	NA	A0A2H4JG78	uncultured_Caudovirales_phage	39.8	1.8e-05
WP_012053011.1|3809889_3810285_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053012.1|3810284_3811046_-	hypothetical protein	NA	A0A2D1GNB3	Pseudomonas_phage	64.1	3.5e-72
WP_041168615.1|3811042_3811816_-	hypothetical protein	NA	A0A2D1GNQ6	Pseudomonas_phage	51.2	5.1e-26
WP_012053014.1|3811815_3812565_-	hypothetical protein	NA	A0A059VF66	Pseudomonas_phage	67.2	9.1e-81
WP_029885826.1|3812694_3812880_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053015.1|3812898_3813090_-	hypothetical protein	NA	B5WZX7	Pseudomonas_phage	41.0	5.4e-06
WP_012053017.1|3813462_3814305_+	S24 family peptidase	NA	A0A2D1GNH0	Pseudomonas_phage	68.2	3.3e-111
WP_012053018.1|3814576_3815152_+	SocA family protein	NA	NA	NA	NA	NA
WP_012053019.1|3815142_3815547_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053020.1|3815587_3815914_-	DUF1654 domain-containing protein	NA	A0A2D1GND3	Pseudomonas_phage	66.7	1.2e-29
WP_012053021.1|3816425_3816614_+	hypothetical protein	NA	A0A2H4JG89	uncultured_Caudovirales_phage	90.2	9.7e-24
WP_012053022.1|3816610_3816865_+	hypothetical protein	NA	A0A2H4J0S5	uncultured_Caudovirales_phage	87.3	1.7e-31
WP_041168491.1|3817276_3817519_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053024.1|3817515_3817758_+	DUF551 domain-containing protein	NA	NA	NA	NA	NA
WP_012053025.1|3817778_3818213_+	hypothetical protein	NA	W6MVG2	Pseudomonas_phage	65.8	1.1e-51
WP_012053026.1|3818234_3818651_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053027.1|3818647_3818851_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053028.1|3818847_3819069_+	hypothetical protein	NA	A0A2H4J1S2	uncultured_Caudovirales_phage	63.0	4.2e-18
WP_012053029.1|3819357_3820089_+	hypothetical protein	NA	A0A2H4J2D5	uncultured_Caudovirales_phage	95.1	1.2e-125
WP_012053030.1|3820085_3820649_+	siphovirus Gp157 family protein	NA	A0A2H4IZG3	uncultured_Caudovirales_phage	93.0	6.6e-92
WP_012053031.1|3820656_3821169_+	hypothetical protein	NA	A0A2H4J7C8	uncultured_Caudovirales_phage	36.1	5.5e-13
WP_012053032.1|3821418_3821940_+	hypothetical protein	NA	A0A2H4JAQ1	uncultured_Caudovirales_phage	57.1	3.4e-10
WP_012053033.1|3821936_3822383_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041168492.1|3822496_3823042_+	hypothetical protein	NA	J9Q748	Salmonella_phage	33.9	2.1e-18
WP_012053035.1|3823065_3823287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053037.1|3823761_3824145_+	hypothetical protein	NA	A0A0U4JNY7	Pseudomonas_phage	46.5	1.1e-26
WP_041168493.1|3824226_3824643_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041168494.1|3824669_3825056_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053039.1|3825133_3825436_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053040.1|3825607_3826402_+	hypothetical protein	NA	Q5QF32	Pseudomonas_virus	54.2	3.1e-71
WP_012053041.1|3826398_3826668_+	hypothetical protein	NA	A0A2H4J399	uncultured_Caudovirales_phage	73.3	2.4e-28
WP_012053042.1|3826664_3826988_+	hypothetical protein	NA	A0A2H4J0N7	uncultured_Caudovirales_phage	88.8	2.7e-50
WP_012053043.1|3826984_3827377_+	DUF2591 family protein	NA	NA	NA	NA	NA
WP_012053044.1|3827373_3827724_+	hypothetical protein	NA	K7RW03	Vibrio_phage	62.0	9.3e-28
WP_012053045.1|3827955_3828435_+	hypothetical protein	NA	A0A1B0VM52	Pseudomonas_phage	55.1	6.7e-37
WP_012053046.1|3828539_3828752_+	AlpA family transcriptional regulator	NA	A0A2H4J8C8	uncultured_Caudovirales_phage	100.0	6.8e-34
3836589:3836614	attR	TCGCGACACAAGGCCGCTCCCACAGG	NA	NA	NA	NA
>prophage 7
NC_009512	Pseudomonas putida F1, complete genome	5959964	4592284	4666012	5959964	integrase,protease,capsid,holin,tRNA,head,portal,tail,terminase	Pseudomonas_phage(31.03%)	92	4589488:4589530	4670898:4670940
4589488:4589530	attL	GGGGCCGCTTTGCGGCCCTTCGCGGGCGCGCCCGCTCCCACAG	NA	NA	NA	NA
WP_012053468.1|4592284_4593109_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	72.0	4.0e-106
WP_003252385.1|4593372_4593972_+	YIP1 family protein	NA	NA	NA	NA	NA
WP_003252383.1|4594103_4594598_+|protease	SprT family zinc-dependent metalloprotease	protease	NA	NA	NA	NA
WP_003252381.1|4594784_4595564_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
WP_004574844.1|4595681_4596608_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_010952700.1|4596604_4596970_-	diacylglycerol kinase	NA	NA	NA	NA	NA
WP_010952699.1|4597043_4597694_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_004574842.1|4597872_4598583_-	DTW domain-containing protein	NA	NA	NA	NA	NA
WP_012053469.1|4598799_4599219_+	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA	NA
WP_012053470.1|4599233_4599443_-	hypothetical protein	NA	NA	NA	NA	NA
WP_003252368.1|4599603_4600722_+	LOG family protein	NA	NA	NA	NA	NA
WP_003252366.1|4600988_4601459_-	recombination regulator RecX	NA	NA	NA	NA	NA
WP_003252365.1|4601480_4602548_-	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	62.0	1.4e-111
WP_012053471.1|4602651_4603134_-	CinA family protein	NA	B5TK85	Pseudomonas_phage	78.0	1.3e-59
WP_012053472.1|4603190_4604258_-	hypothetical protein	NA	NA	NA	NA	NA
WP_041168630.1|4605084_4605915_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053474.1|4605951_4606257_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012052974.1|4606253_4606547_-	hypothetical protein	NA	A0A2H4JER5	uncultured_Caudovirales_phage	68.0	1.6e-33
WP_012053475.1|4606620_4606845_-	hypothetical protein	NA	A0A2H4JG60	uncultured_Caudovirales_phage	82.4	3.5e-28
WP_012053476.1|4606858_4607353_-	DUF2514 domain-containing protein	NA	A0A2H4J3Q6	uncultured_Caudovirales_phage	61.0	2.5e-39
WP_012053477.1|4607349_4607799_-	hypothetical protein	NA	A0A2R3UAM8	Myoviridae_environmental_samples	54.1	1.2e-32
WP_012053478.1|4607895_4608702_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053479.1|4608726_4610664_-	hypothetical protein	NA	A0A2H5BHG7	Acinetobacter_phage	28.5	3.4e-18
WP_012053480.1|4610707_4611190_-	hypothetical protein	NA	B5WZT5	Pseudomonas_phage	52.3	2.7e-25
WP_012053481.1|4611201_4614300_-	hypothetical protein	NA	A0A2H4J0V9	uncultured_Caudovirales_phage	49.1	9.1e-284
WP_012053482.1|4614271_4614691_-	hypothetical protein	NA	A0A0H5AUG1	Pseudomonas_phage	59.4	1.8e-41
WP_042162696.1|4614769_4615015_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053483.1|4615074_4615557_-	DUF1833 family protein	NA	A0A2H4J983	uncultured_Caudovirales_phage	55.3	1.8e-45
WP_012053484.1|4615553_4617998_-|tail	tail tape measure protein	tail	A0A2H4PI09	Pseudomonas_phage	39.7	1.2e-142
WP_012053485.1|4618053_4618404_-	superinfection immunity protein	NA	A0A0S2SY85	Pseudomonas_phage	57.7	1.1e-09
WP_012053486.1|4618477_4618678_-	hypothetical protein	NA	Q9MCA3	Pseudomonas_phage	50.8	5.1e-07
WP_012053487.1|4618701_4619172_-|tail	phage tail assembly protein	tail	K7PJU9	Enterobacteria_phage	64.7	6.6e-37
WP_012053488.1|4619180_4619915_-|tail	tail protein	tail	H2BDC0	Pseudomonas_virus	50.2	7.9e-53
WP_012053489.1|4619980_4620349_-	DUF3168 domain-containing protein	NA	Q9MCA6	Pseudomonas_phage	62.3	1.4e-37
WP_012053490.1|4620345_4620831_-	HK97 gp10 family phage protein	NA	A0A0U3TGT7	Pseudomonas_phage	74.5	4.8e-59
WP_041168632.1|4620823_4621162_-|head	phage head closure protein	head	A0A1J0GUY4	Halomonas_phage	52.7	9.6e-22
WP_012053492.1|4621164_4621488_-|head,tail	phage gp6-like head-tail connector protein	head,tail	B5WZS4	Pseudomonas_phage	44.4	1.4e-17
WP_012053493.1|4621484_4622429_-|portal	phage portal protein	portal	S4TNN1	Salmonella_phage	61.2	4.0e-49
WP_012053494.1|4622415_4623783_-|portal	phage portal protein	portal	F8TVA0	EBPR_siphovirus	58.2	1.5e-129
WP_041168633.1|4623797_4624016_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053496.1|4624069_4626019_-|capsid	phage major capsid protein	capsid	S4TNE3	Salmonella_phage	51.9	1.6e-169
WP_012053497.1|4626075_4627743_-|terminase	terminase large subunit	terminase	Q3HQS7	Burkholderia_phage	65.2	3.9e-209
WP_012053498.1|4627745_4628243_-|terminase	terminase	terminase	Q3HQS6	Burkholderia_phage	54.7	1.4e-29
WP_012053499.1|4628388_4628694_-	HNH endonuclease	NA	A0A0R6PHK1	Moraxella_phage	64.9	2.1e-23
WP_041168520.1|4628693_4628882_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053501.1|4628932_4629181_-	hypothetical protein	NA	NA	NA	NA	NA
WP_012053502.1|4629177_4629459_-|holin	phage holin family protein	holin	A0A2H4J0H1	uncultured_Caudovirales_phage	93.5	6.3e-43
WP_012053503.1|4629459_4629834_-	hypothetical protein	NA	A0A2H4J7X6	uncultured_Caudovirales_phage	87.9	2.7e-57
WP_012053504.1|4629993_4630680_-	hypothetical protein	NA	A0A1B0VMF2	Pseudomonas_phage	63.6	6.0e-79
WP_012053505.1|4630690_4631008_-	hypothetical protein	NA	A0A2D1GNG3	Pseudomonas_phage	63.8	5.6e-32
WP_012053507.1|4631168_4632467_-|integrase	site-specific integrase	integrase	A0A2D1GND4	Pseudomonas_phage	54.1	2.4e-121
WP_012053508.1|4632463_4632892_-	VRR-NUC domain-containing protein	NA	A0A2D1GNH3	Pseudomonas_phage	79.4	7.1e-54
WP_012053509.1|4632888_4633185_-	DUF1364 domain-containing protein	NA	A0A220NQY2	Salmonella_phage	69.9	2.6e-31
WP_012053510.1|4633184_4633979_-	ATP-binding protein	NA	A0A2H4J3E5	uncultured_Caudovirales_phage	54.9	1.0e-74
WP_041168634.1|4633968_4634781_-	replication protein	NA	A0A0S2SYI8	Pseudomonas_phage	41.0	9.4e-23
WP_012053512.1|4635264_4636086_+	helix-turn-helix domain-containing protein	NA	H2BD63	Pseudomonas_phage	44.2	2.8e-51
WP_012053513.1|4636131_4636446_-	DUF1654 domain-containing protein	NA	A0A2D1GND3	Pseudomonas_phage	60.0	5.6e-24
WP_012053514.1|4636852_4637077_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053515.1|4637207_4637591_+	helix-turn-helix transcriptional regulator	NA	A0A2H4JA92	uncultured_Caudovirales_phage	63.0	1.4e-24
WP_012053516.1|4637610_4637949_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053517.1|4637945_4638443_+	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	69.2	2.4e-45
WP_041168521.1|4638700_4638889_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053519.1|4638927_4639533_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053520.1|4639620_4640400_+	DUF2786 domain-containing protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	34.6	3.9e-18
WP_012053521.1|4640396_4641272_+	hypothetical protein	NA	A0A2H4J418	uncultured_Caudovirales_phage	55.5	2.6e-95
WP_012053522.1|4641278_4642220_+	hypothetical protein	NA	A0A2R3UAM3	Myoviridae_environmental_samples	43.6	4.4e-16
WP_012053524.1|4642418_4643213_+	hypothetical protein	NA	Q5QF32	Pseudomonas_virus	54.7	2.8e-72
WP_012053525.1|4643209_4643479_+	hypothetical protein	NA	A0A2H4J399	uncultured_Caudovirales_phage	74.4	3.8e-29
WP_012053526.1|4643475_4643757_+	hypothetical protein	NA	NA	NA	NA	NA
WP_012053527.1|4643753_4644149_+	DUF2591 domain-containing protein	NA	J7I4M3	Pseudomonas_phage	37.6	1.9e-16
WP_012053528.1|4644145_4644502_+	hypothetical protein	NA	K7RW03	Vibrio_phage	65.0	5.0e-29
WP_012053529.1|4644732_4645125_+	hypothetical protein	NA	NA	NA	NA	NA
WP_016712905.1|4645160_4645355_+	DUF4224 domain-containing protein	NA	A0A2H4JC20	uncultured_Caudovirales_phage	66.2	1.7e-18
WP_012053531.1|4645367_4646348_+|integrase	tyrosine-type recombinase/integrase	integrase	A0A1B0VP19	Pseudomonas_phage	69.3	2.6e-128
WP_012053532.1|4646531_4647257_-	zeta toxin family protein	NA	NA	NA	NA	NA
WP_012053533.1|4647449_4650023_+	DNA mismatch repair protein MutS	NA	A0A1V0SJ67	Klosneuvirus	23.2	5.2e-27
WP_003252355.1|4650163_4650487_+	ferredoxin family protein	NA	NA	NA	NA	NA
WP_003252351.1|4651022_4652030_-	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	5.0e-34
WP_004574839.1|4652138_4652996_-	peptidoglycan DD-metalloendopeptidase family protein	NA	I3PV79	Clostridium_phage	36.2	1.9e-13
WP_012053535.1|4653233_4653908_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	52.0	6.8e-43
WP_003252346.1|4653907_4654657_-	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.2	9.8e-67
WP_003252344.1|4654644_4655703_-|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
WP_003252342.1|4655699_4656173_-	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
WP_003252340.1|4656285_4657140_-	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
WP_003252338.1|4657148_4658261_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	28.8	6.2e-33
WP_012053536.1|4658368_4659265_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
WP_003252335.1|4659388_4660096_-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
WP_004576849.1|4660092_4660374_-	cell division protein FtsB	NA	NA	NA	NA	NA
WP_003252333.1|4660539_4661829_-	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.6	1.9e-139
WP_010952685.1|4661983_4662829_-	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.0	1.1e-50
WP_003252329.1|4662832_4664461_-	CTP synthase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	53.3	4.0e-158
WP_012053537.1|4664728_4666012_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
4670898:4670940	attR	CTGTGGGAGCGGGCGCGCCCGCGAAGGGCCGCAAAGCGGCCCC	NA	NA	NA	NA
