The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	361158	403422	2906700	tail,capsid,integrase,terminase,head,holin,plate,portal	Staphylococcus_phage(86.15%)	65	361048:361065	404154:404171
361048:361065	attL	ATCATACAAGGATGGGAT	NA	NA	NA	NA
WP_000264186.1|361158_362364_-|integrase	site-specific integrase	integrase	Q4ZBP1	Staphylococcus_phage	100.0	8.5e-222
WP_000337827.1|362474_362654_+	hypothetical protein	NA	Q4ZBP0	Staphylococcus_phage	100.0	3.7e-25
WP_001077638.1|362779_363271_-	hypothetical protein	NA	Q4ZBN8	Staphylococcus_phage	100.0	7.5e-84
WP_000525016.1|363291_363753_-	hypothetical protein	NA	Q4ZBN7	Staphylococcus_phage	100.0	1.2e-83
WP_001260487.1|363765_364089_-	helix-turn-helix transcriptional regulator	NA	A0A0H3U2V8	Staphylococcus_phage	100.0	2.0e-53
WP_000272858.1|364252_364501_+	helix-turn-helix transcriptional regulator	NA	Q4ZBN5	Staphylococcus_phage	100.0	2.2e-39
WP_001153175.1|364515_364677_+	hypothetical protein	NA	Q4ZBN4	Staphylococcus_phage	100.0	1.9e-20
WP_044118938.1|364669_364963_-	hypothetical protein	NA	Q4ZB03	Staphylococcus_virus	98.8	4.0e-40
WP_000933365.1|365356_365542_+	helix-turn-helix transcriptional regulator	NA	A0A0H4IP57	Staphylococcus_phage	100.0	1.3e-25
WP_001148634.1|365543_366296_+	phage antirepressor KilAC domain-containing protein	NA	A0A0E3T9K5	Staphylococcus_phage	99.2	4.8e-138
WP_000993180.1|366311_366530_+	hypothetical protein	NA	Q4ZBN1	Staphylococcus_phage	100.0	1.1e-31
WP_001124198.1|366559_366823_+	helix-turn-helix domain-containing protein	NA	A0A2I6PEL8	Staphylococcus_phage	100.0	2.5e-46
WP_000066020.1|366834_366996_+	DUF1270 domain-containing protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
WP_000165371.1|367090_367393_+	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000291510.1|367397_367658_+	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_001205732.1|367666_367930_+	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000700554.1|367938_369882_+	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
WP_000180599.1|369883_370804_+	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	99.7	4.3e-165
WP_064135358.1|370884_371502_+	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000934759.1|371502_371973_+	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_000148333.1|372002_372896_+	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000338528.1|372902_373121_+	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000401969.1|373129_373534_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000101282.1|373546_373915_+	hypothetical protein	NA	A0A0H4J337	Staphylococcus_phage	96.7	6.9e-50
WP_000132210.1|373918_374161_+	hypothetical protein	NA	Q4ZBD5	Staphylococcus_virus	97.5	1.2e-39
WP_000693995.1|374174_374381_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	98.5	8.7e-34
WP_000695762.1|374383_374785_+	hypothetical protein	NA	Q4ZAC1	Staphylococcus_virus	100.0	1.1e-69
WP_000979209.1|374781_375129_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000144711.1|375125_375434_+	hypothetical protein	NA	R4IFL1	Staphylococcus_phage	100.0	4.8e-52
WP_001065026.1|375426_375675_+	DUF1024 family protein	NA	S4V7K0	Staphylococcus_phage	100.0	4.1e-38
WP_000185682.1|375667_376204_+	dUTP diphosphatase	NA	A0A0N9BAX6	Staphylococcus_phage	100.0	1.6e-95
WP_000195831.1|376240_376477_+	DUF1381 domain-containing protein	NA	C8CH06	Staphylococcus_phage	100.0	1.1e-35
WP_000483479.1|376501_376738_+	hypothetical protein	NA	A0A0N7E0U3	Staphylococcus_phage	88.5	1.9e-32
WP_001580341.1|376727_377117_+	hypothetical protein	NA	A0A0N9BB01	Staphylococcus_phage	100.0	1.1e-64
WP_000595257.1|377113_377287_+	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_000989954.1|377287_377653_+	hypothetical protein	NA	Q4ZBJ9	Staphylococcus_phage	100.0	3.6e-59
WP_000989960.1|377653_377800_+	hypothetical protein	NA	Q4ZBJ8	Staphylococcus_phage	100.0	7.5e-16
WP_000162702.1|377823_378246_+	RinA family phage transcriptional activator	NA	Q4ZBJ7	Staphylococcus_phage	100.0	1.2e-74
WP_000594082.1|378573_379068_+|terminase	terminase	terminase	R4IH30	Staphylococcus_phage	100.0	1.1e-74
WP_000606640.1|379060_380269_+|terminase	PBSX family phage terminase large subunit	terminase	R4IG95	Staphylococcus_phage	99.8	3.0e-235
WP_001159668.1|380222_381701_+|portal	phage portal protein	portal	Q4ZB45	Staphylococcus_virus	99.6	3.3e-284
WP_001795666.1|381639_382620_+|head	phage head morphogenesis protein	head	Q4ZAW9	Staphylococcus_virus	98.2	3.3e-179
WP_000366932.1|382717_383314_+	phage scaffolding protein	NA	R4IG73	Staphylococcus_phage	100.0	5.6e-73
WP_001135558.1|383334_384159_+|capsid	N4-gp56 family major capsid protein	capsid	R4IH32	Staphylococcus_phage	100.0	5.6e-148
WP_000278799.1|384175_384502_+	Rho termination factor N-terminal domain-containing protein	NA	A0A0E3TAL3	Staphylococcus_phage	100.0	4.3e-51
WP_000338935.1|384501_384816_+|head,tail	phage head-tail connector protein	head,tail	R4IFL8	Staphylococcus_phage	100.0	4.0e-54
WP_000482986.1|384808_385144_+|head	phage head closure protein	head	A0A2H4PQL0	Staphylococcus_phage	100.0	3.0e-60
WP_001151335.1|385130_385544_+	HK97 gp10 family phage protein	NA	R4IG77	Staphylococcus_phage	100.0	2.0e-77
WP_000270197.1|385556_385994_+	DUF3168 domain-containing protein	NA	A0A0E3T9M9	Staphylococcus_phage	99.3	7.9e-77
WP_000046067.1|385980_386541_+	hypothetical protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
WP_000141082.1|386602_387097_+	hypothetical protein	NA	R4IFM1	Staphylococcus_phage	100.0	4.3e-87
WP_001580347.1|387117_387459_+	hypothetical protein	NA	A0A2H4PQL5	Staphylococcus_phage	100.0	3.5e-56
WP_000414235.1|387461_390431_+|terminase	terminase	terminase	Q4ZAG7	Staphylococcus_virus	99.1	1.9e-262
WP_000560196.1|390445_391381_+|tail	phage tail family protein	tail	R4IH41	Staphylococcus_phage	100.0	8.2e-180
WP_001144708.1|391391_393278_+|tail	phage tail protein	tail	R4IGA4	Staphylococcus_phage	99.7	0.0e+00
WP_000323256.1|393290_395189_+	hypothetical protein	NA	A0A0H3U448	Staphylococcus_phage	98.4	0.0e+00
WP_000259638.1|395188_397012_+|plate	phage baseplate upper protein	plate	B1H3M3	Staphylococcus_phage	99.8	0.0e+00
WP_000705893.1|397011_397389_+	DUF2977 domain-containing protein	NA	Q8LTH7	Staphylococcus_phage	100.0	7.3e-55
WP_001790193.1|397392_397566_+	XkdX family protein	NA	Q8LTH6	Staphylococcus_phage	100.0	1.7e-27
WP_000466769.1|397606_397906_+	DUF2951 domain-containing protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
WP_000524044.1|398042_399917_+	glucosaminidase domain-containing protein	NA	A0A2I6PCX0	Staphylococcus_phage	100.0	0.0e+00
WP_000276655.1|399929_401102_+|plate	BppU family phage baseplate upper protein	plate	A0EWN2	Staphylococcus_virus	99.7	2.4e-197
WP_000398864.1|401107_401503_+	hypothetical protein	NA	A9CRD5	Staphylococcus_phage	99.2	4.7e-68
WP_000354129.1|401558_401996_+|holin	phage holin	holin	A7YGY0	Staphylococcus_virus	97.9	5.9e-72
WP_001148113.1|401976_403422_+	SH3 domain-containing protein	NA	Q4ZB16	Staphylococcus_virus	99.0	3.8e-293
404154:404171	attR	ATCATACAAGGATGGGAT	NA	NA	NA	NA
>prophage 2
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	797330	805151	2906700		Hokovirus(16.67%)	10	NA	NA
WP_000244415.1|797330_798386_-	two-component system sensor histidine kinase SaeS	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
WP_000149344.1|798385_799072_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_001037807.1|799046_799520_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001093562.1|799862_800303_-	DM13 domain-containing protein	NA	NA	NA	NA	NA
WP_000604990.1|800582_801167_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001062972.1|801265_801979_-	7-carboxy-7-deazaguanine synthase QueE	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
WP_000941336.1|801982_802402_-	6-carboxytetrahydropterin synthase QueD	NA	S4U060	uncultured_phage	28.7	6.3e-07
WP_000446724.1|802403_803072_-	7-cyano-7-deazaguanine synthase QueC	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
WP_000604514.1|803422_804016_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
WP_001217796.1|803999_805151_+	anthranilate synthase component I family protein	NA	S4VNU7	Pandoravirus	35.7	6.0e-23
>prophage 3
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	817122	831763	2906700		uncultured_Caudovirales_phage(50.0%)	14	NA	NA
WP_000663030.1|817122_818181_+	histidinol-phosphate transaminase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
WP_000197262.1|818519_819062_+	5'-3'-deoxyribonucleotidase	NA	NA	NA	NA	NA
WP_000429006.1|819940_820858_-	diacylglycerol kinase family lipid kinase	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
WP_031760357.1|820948_821050_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000193751.1|821127_822633_-	peptide MFS transporter	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
WP_000930014.1|822973_823474_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
WP_001068501.1|823493_824360_-	DMT family transporter	NA	NA	NA	NA	NA
WP_000692521.1|825160_825559_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
WP_000855514.1|825521_827627_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
WP_000562498.1|827744_828716_+	class 1b ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
WP_000499195.1|828896_829052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000876318.1|829090_830062_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.9	4.3e-139
WP_001245577.1|830048_831005_+	iron chelate uptake ABC transporter family permease subunit	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
WP_000616840.1|831001_831763_+	ABC transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	6.5e-18
>prophage 4
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	917242	974173	2906700	tail,capsid,integrase,terminase,head,transposase,holin,plate,portal	Staphylococcus_phage(75.34%)	85	915339:915355	949993:950009
915339:915355	attL	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_001006450.1|917242_918493_+	cysteine desulfurase	NA	Q2XUY6	environmental_halophage	44.8	1.1e-110
WP_001010508.1|918482_918947_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA	NA
WP_001074415.1|919097_920495_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA	NA
WP_001145726.1|920562_921612_-|integrase	site-specific integrase	integrase	A1KWY3	Staphylococcus_virus	99.7	4.5e-203
WP_000337826.1|921724_921904_+	hypothetical protein	NA	A0EWN7	Staphylococcus_virus	100.0	8.3e-25
WP_000392186.1|921883_922816_-	hypothetical protein	NA	A0EWN8	Staphylococcus_virus	100.0	3.9e-174
WP_000661437.1|922847_923573_-	PH domain-containing protein	NA	A0A0F6N4L7	Staphylococcus_phage	100.0	9.9e-125
WP_000775187.1|923600_924275_-	ImmA/IrrE family metallo-endopeptidase	NA	A0A0F6N3H6	Staphylococcus_phage	100.0	4.9e-126
WP_001055143.1|924291_924624_-	helix-turn-helix transcriptional regulator	NA	R4IH08	Staphylococcus_phage	100.0	4.1e-57
WP_000108122.1|924886_925081_+	helix-turn-helix transcriptional regulator	NA	A0A0F6N3M9	Staphylococcus_phage	100.0	1.1e-25
WP_001002757.1|925080_925848_+	phage antirepressor Ant	NA	A0A0F6N3N8	Staphylococcus_phage	100.0	1.1e-142
WP_000187184.1|925848_926073_+	hypothetical protein	NA	A0A0F6N4M2	Staphylococcus_phage	100.0	3.2e-34
WP_001094943.1|926112_926562_+	hypothetical protein	NA	A1KWZ2	Staphylococcus_virus	100.0	3.0e-79
WP_000977381.1|926575_926797_+	hypothetical protein	NA	A0A0F6N3I2	Staphylococcus_phage	100.0	1.5e-31
WP_000066011.1|926789_926951_+	DUF1270 domain-containing protein	NA	Q4ZAZ7	Staphylococcus_virus	100.0	2.5e-20
WP_000165363.1|927044_927347_+	DUF2482 family protein	NA	A0A0F6N3N3	Staphylococcus_phage	100.0	1.4e-48
WP_000291090.1|927351_927612_+	DUF1108 family protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
WP_000815401.1|927621_927843_+	DUF2483 family protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
WP_000139720.1|927835_928459_+	DUF1071 domain-containing protein	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
WP_000934385.1|928458_928887_+	single-stranded DNA-binding protein	NA	B2ZYV4	Staphylococcus_phage	100.0	3.9e-60
WP_001124438.1|928900_929575_+	hypothetical protein	NA	R4IH15	Staphylococcus_phage	96.9	1.4e-125
WP_001081076.1|929571_929721_+	hypothetical protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
WP_000414755.1|929713_929995_-	hypothetical protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
WP_000190254.1|930060_930831_+	phage protein	NA	G4KNP0	Staphylococcus_phage	100.0	6.4e-122
WP_000803062.1|930840_931620_+	ATP-binding protein	NA	G4KNP1	Staphylococcus_phage	100.0	3.8e-146
WP_000256589.1|931613_931772_+	hypothetical protein	NA	A0A2H4PQI7	Staphylococcus_phage	100.0	4.5e-22
WP_001123695.1|931784_932006_+	DUF3269 family protein	NA	A0A0H3U2V4	Staphylococcus_phage	100.0	2.2e-35
WP_000049794.1|932015_932420_+	DUF1064 domain-containing protein	NA	A1KX76	Staphylococcus_virus	100.0	9.6e-69
WP_001187243.1|932424_932610_+	DUF3113 family protein	NA	A0A0F6N3K7	Staphylococcus_phage	100.0	1.1e-27
WP_000101252.1|932610_932916_+	hypothetical protein	NA	A0A0F6N4H9	Staphylococcus_phage	100.0	1.7e-49
WP_000029376.1|933043_933400_+	hypothetical protein	NA	A0A0F6N3E3	Staphylococcus_phage	100.0	6.5e-61
WP_000131376.1|933403_933646_+	hypothetical protein	NA	A0A0F6N3E1	Staphylococcus_phage	98.8	1.9e-40
WP_001557190.1|933654_934026_+	hypothetical protein	NA	A0A0F6N3K4	Staphylococcus_phage	100.0	3.6e-54
WP_001065060.1|934018_934273_+	DUF1024 family protein	NA	A1KX15	Staphylococcus_virus	97.6	2.5e-38
WP_000714412.1|934259_934430_+	hypothetical protein	NA	A7TWH6	Staphylococcus_phage	91.1	1.5e-20
WP_000185647.1|934422_934956_+	dUTP pyrophosphatase	NA	A1KX16	Staphylococcus_virus	99.4	2.4e-96
WP_000617154.1|934992_935199_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	72.1	1.0e-18
WP_000132921.1|935195_935390_+	hypothetical protein	NA	A0A2I6PEC2	Staphylococcus_phage	100.0	6.0e-29
WP_001072795.1|935386_935590_+	hypothetical protein	NA	A0A0N9BAX5	Staphylococcus_phage	100.0	5.2e-31
WP_000608278.1|935582_935819_+	hypothetical protein	NA	Q4ZDP0	Staphylococcus_virus	100.0	2.8e-36
WP_000595257.1|935811_935985_+	transcriptional activator RinB	NA	Q4ZBK0	Staphylococcus_phage	100.0	6.4e-22
WP_000990004.1|935985_936090_+	hypothetical protein	NA	B2ZYX7	Staphylococcus_phage	100.0	7.0e-08
WP_000162701.1|936155_936578_+	RinA family phage transcriptional activator	NA	A0A0F6N3E5	Staphylococcus_phage	100.0	1.2e-74
WP_001038244.1|936765_937260_+|terminase	terminase small subunit	terminase	A0A0F6N3K6	Staphylococcus_phage	100.0	7.8e-89
WP_000273011.1|937262_938558_+|terminase	PBSX family phage terminase large subunit	terminase	A0A0F6N3L3	Staphylococcus_phage	100.0	3.0e-257
WP_000909970.1|938568_940107_+|portal	phage portal protein	portal	A0A0F6N4I8	Staphylococcus_phage	100.0	2.4e-293
WP_001133044.1|940113_941109_+|capsid	minor capsid protein	capsid	A0A0F6N3F1	Staphylococcus_phage	100.0	2.0e-184
WP_000072208.1|941181_941352_+	hypothetical protein	NA	A0A0F6N3E9	Staphylococcus_phage	100.0	1.5e-23
WP_000392151.1|941460_942081_+	DUF4355 domain-containing protein	NA	S4V984	Staphylococcus_phage	98.5	1.7e-69
WP_000438511.1|942094_943069_+|capsid	phage major capsid protein	capsid	E0Y3L0	Staphylococcus_virus	100.0	2.2e-183
WP_001114086.1|943090_943378_+	hypothetical protein	NA	S4V6D9	Staphylococcus_phage	98.9	1.4e-45
WP_000208960.1|943386_943719_+|head,tail	phage head-tail connector protein	head,tail	A0A0F6N3F4	Staphylococcus_phage	100.0	5.5e-54
WP_001268312.1|943715_944018_+	hypothetical protein	NA	A4ZFB6	Staphylococcus_virus	100.0	1.1e-50
WP_001017815.1|944017_944365_+	HK97 gp10 family phage protein	NA	A0A0F6N3F5	Staphylococcus_phage	100.0	4.1e-60
WP_000188643.1|944376_944760_+	hypothetical protein	NA	E0Y3L5	Staphylococcus_virus	98.4	3.8e-67
WP_000002577.1|944778_945360_+|tail	phage major tail protein, TP901-1 family	tail	A0A0F6N3L8	Staphylococcus_phage	100.0	4.9e-106
WP_001100161.1|945421_945787_+|tail	tail assembly chaperone	tail	A0A0F6N4J9	Staphylococcus_phage	100.0	3.6e-59
WP_000105584.1|945816_946161_+	hypothetical protein	NA	A0A0F6N3F7	Staphylococcus_phage	100.0	2.5e-57
WP_000141480.1|946177_949645_+	hypothetical protein	NA	A0A0F6N3F9	Staphylococcus_phage	100.0	4.2e-245
WP_000350675.1|949657_950605_+|tail	phage tail family protein	tail	A0A0F6N3L4	Staphylococcus_phage	100.0	2.8e-183
949993:950009	attR	GAAATTAGATAAAAACA	NA	NA	NA	NA
WP_000152716.1|950613_952515_+|tail	phage tail protein	tail	I1W634	Staphylococcus_phage	99.7	0.0e+00
WP_000369003.1|952529_954440_+	hypothetical protein	NA	Q4ZDU1	Staphylococcus_virus	98.7	0.0e+00
WP_000259619.1|954439_956263_+|plate	BppU family phage baseplate upper protein	plate	A1KX42	Staphylococcus_virus	99.2	3.9e-295
WP_000705896.1|956262_956640_+	DUF2977 domain-containing protein	NA	A0A0F6N3G4	Staphylococcus_phage	100.0	1.5e-60
WP_000782200.1|956643_956817_+	XkdX family protein	NA	A0A0F6N3L7	Staphylococcus_phage	100.0	6.6e-27
WP_000466778.1|956856_957156_+	DUF2951 domain-containing protein	NA	A0A0H4ITZ0	Staphylococcus_phage	100.0	7.6e-47
WP_000524022.1|957292_959191_+	glucosaminidase domain-containing protein	NA	A0EX80	Staphylococcus_virus	99.7	0.0e+00
WP_000276662.1|959203_960442_+|plate	BppU family phage baseplate upper protein	plate	A0A0F6N3G7	Staphylococcus_phage	100.0	1.6e-210
WP_000398868.1|960447_960843_+	hypothetical protein	NA	A1KXB6	Staphylococcus_virus	100.0	1.6e-68
WP_000351119.1|960898_961174_+|holin	phage holin	holin	A0A0F6N3M0	Staphylococcus_phage	100.0	8.6e-45
WP_001141517.1|961160_962573_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A0F6N3N1	Staphylococcus_phage	100.0	5.8e-286
WP_001035620.1|962632_963190_-	DUF4888 domain-containing protein	NA	A0A0F6N4L1	Staphylococcus_phage	100.0	7.4e-96
WP_001788502.1|963564_963717_+	hypothetical protein	NA	A0A0F6N3H2	Staphylococcus_phage	100.0	3.1e-20
WP_000139423.1|963787_963898_+	hypothetical protein	NA	W5R8J7	Staphylococcus_phage	100.0	1.7e-12
WP_001286805.1|963899_964085_+	hypothetical protein	NA	A0A0F6N3H3	Staphylococcus_phage	100.0	2.7e-26
WP_000274029.1|964914_965229_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000582326.1|965593_966634_+	HlyC/CorC family transporter	NA	NA	NA	NA	NA
WP_000267236.1|966647_967715_+	nitronate monooxygenase	NA	NA	NA	NA	NA
WP_016170465.1|967968_968052_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000608129.1|968099_968948_+	DUF72 domain-containing protein	NA	NA	NA	NA	NA
WP_000927632.1|968960_969788_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
WP_001241246.1|969814_971134_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000201875.1|971217_972135_+	lipoyl synthase	NA	NA	NA	NA	NA
WP_000598444.1|972264_972648_+	YutD family protein	NA	NA	NA	NA	NA
WP_001557163.1|972853_974173_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
>prophage 5
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	1073354	1146207	2906700	tail,capsid,integrase,terminase,bacteriocin,head,holin,plate,protease,portal	Staphylococcus_phage(88.24%)	92	1076200:1076226	1121703:1121729
WP_001049950.1|1073354_1074917_+	peptide chain release factor 3	NA	A0A1S5SF82	Streptococcus_phage	28.2	1.7e-36
WP_000928413.1|1075218_1076022_+	TerC family protein	NA	S5MAL1	Bacillus_phage	40.5	1.6e-30
1076200:1076226	attL	ATTAGGTGTTAATGTGTCATAATGATA	NA	NA	NA	NA
WP_000264741.1|1076310_1077516_-|integrase	site-specific integrase	integrase	B7T0F2	Staphylococcus_virus	98.5	1.2e-218
WP_000191459.1|1077641_1078256_+	hypothetical protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
WP_001013104.1|1078252_1078399_-	hypothetical protein	NA	A0A2I6PEK8	Staphylococcus_phage	89.6	1.1e-14
WP_000825948.1|1078628_1079213_-	hypothetical protein	NA	A0A2I6PD77	Staphylococcus_phage	100.0	1.4e-68
WP_000525004.1|1079230_1079692_-	hypothetical protein	NA	A0A2K9VBR7	Staphylococcus_phage	100.0	1.2e-83
WP_000333630.1|1079704_1080019_-	helix-turn-helix transcriptional regulator	NA	A0A0N9BAW4	Staphylococcus_phage	100.0	9.8e-53
WP_001121027.1|1080170_1080407_+	helix-turn-helix transcriptional regulator	NA	A0A2I6PD81	Staphylococcus_phage	100.0	1.5e-37
WP_001148544.1|1080420_1081197_+	Rha family transcriptional regulator	NA	A0A2I6PD87	Staphylococcus_phage	100.0	1.1e-140
WP_000939498.1|1081225_1081369_+	hypothetical protein	NA	W5R8I6	Staphylococcus_phage	100.0	2.5e-16
WP_000642492.1|1081358_1081568_-	hypothetical protein	NA	W5R9J5	Staphylococcus_phage	100.0	1.2e-30
WP_001025401.1|1081623_1081869_+	DUF2829 domain-containing protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
WP_001128433.1|1081837_1082203_-	hypothetical protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
WP_001097552.1|1082257_1082473_+	hypothetical protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
WP_001124160.1|1082497_1082761_+	helix-turn-helix domain-containing protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
WP_001285954.1|1082773_1082935_+	DUF1270 domain-containing protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
WP_000175002.1|1083013_1083337_+	hypothetical protein	NA	A0A2I6PF12	Staphylococcus_phage	99.1	8.5e-52
WP_000985976.1|1083351_1083714_+	hypothetical protein	NA	A0A2I6PF03	Staphylococcus_phage	100.0	4.9e-56
WP_000762547.1|1083710_1084877_+	DUF2800 domain-containing protein	NA	A0A2D1G5B8	Staphylococcus_phage	100.0	8.3e-222
WP_000645042.1|1084902_1085460_+	DUF2815 family protein	NA	A0A2I6PF05	Staphylococcus_phage	100.0	1.8e-97
WP_078055733.1|1085528_1087481_+	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	99.8	0.0e+00
WP_001164630.1|1087493_1087679_+	DUF3113 family protein	NA	A0A2I6PEM8	Staphylococcus_phage	98.4	2.1e-26
WP_000113974.1|1087678_1088080_+	PVL family protein	NA	A0A2I6PEL5	Staphylococcus_phage	100.0	1.2e-68
WP_000022736.1|1088079_1088334_+	DUF3310 domain-containing protein	NA	Q6R831	Staphylococcus_virus	100.0	1.3e-42
WP_060474161.1|1088333_1088582_+	hypothetical protein	NA	A0A2K9VBX5	Staphylococcus_phage	100.0	1.2e-40
WP_000693988.1|1088595_1088802_+	hypothetical protein	NA	A0A2K9VBT9	Staphylococcus_phage	97.1	1.1e-33
WP_000979209.1|1089194_1089542_+	hypothetical protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
WP_000219084.1|1089538_1089928_+	acetyltransferase	NA	A0A0F6N3K4	Staphylococcus_phage	92.5	9.9e-47
WP_001065051.1|1089920_1090169_+	DUF1024 family protein	NA	A0A0E3T8I2	Staphylococcus_phage	97.6	4.5e-37
WP_000185680.1|1090161_1090698_+	dUTP diphosphatase	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
WP_000195803.1|1090734_1090941_+	DUF1381 domain-containing protein	NA	A0A0H3U2R7	Staphylococcus_phage	100.0	1.3e-29
WP_000592211.1|1090937_1091324_+	hypothetical protein	NA	A0A0H3U465	Staphylococcus_phage	100.0	5.2e-64
WP_000595263.1|1091320_1091473_+	transcriptional activator RinB	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
WP_000265252.1|1091540_1091741_+	DUF1514 family protein	NA	A0A2I6PEP5	Staphylococcus_phage	100.0	4.9e-26
WP_000884878.1|1092028_1094476_+	virulence-associated E family protein	NA	B5WZN5	Staphylococcus_phage	99.8	0.0e+00
WP_015978074.1|1094578_1094683_-	hypothetical protein	NA	A0A2I6PDP6	Staphylococcus_phage	100.0	2.7e-12
WP_000665203.1|1094816_1095107_+	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
WP_001793488.1|1095087_1096455_+	DEAD/DEAH box helicase	NA	A0A2I6PE95	Staphylococcus_phage	100.0	1.7e-263
WP_000513699.1|1096467_1096905_+	transcriptional regulator	NA	A0A2I6PDC2	Staphylococcus_phage	100.0	4.6e-77
WP_000160689.1|1097061_1097376_+	HNH endonuclease	NA	A0A2I6PDC4	Staphylococcus_phage	100.0	2.5e-56
WP_000778932.1|1097504_1097810_+|terminase	P27 family phage terminase small subunit	terminase	A0A2I6PE27	Staphylococcus_phage	100.0	2.9e-49
WP_000153555.1|1097799_1099491_+|terminase	terminase large subunit	terminase	A0A2I6PE44	Staphylococcus_phage	100.0	0.0e+00
WP_001100670.1|1099495_1100734_+|portal	phage portal protein	portal	A0A2I6PEA6	Staphylococcus_phage	100.0	6.9e-235
WP_000061868.1|1100717_1101491_+|protease	Clp protease ClpP	protease	A0A2I6PE26	Staphylococcus_phage	100.0	4.9e-138
WP_001142735.1|1101502_1102666_+|capsid	phage major capsid protein	capsid	A0A2I6PE62	Staphylococcus_phage	100.0	3.6e-217
WP_000050975.1|1102734_1103013_+|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2I6PE36	Staphylococcus_phage	100.0	2.1e-46
WP_000395501.1|1103024_1103357_+	hypothetical protein	NA	A0A2I6PDD6	Staphylococcus_phage	100.0	6.2e-58
WP_000110020.1|1103353_1103755_+	hypothetical protein	NA	A0A2I6PDD3	Staphylococcus_phage	100.0	6.2e-68
WP_001023802.1|1103755_1104151_+	DUF3168 domain-containing protein	NA	A0A2I6PDD8	Staphylococcus_phage	100.0	2.6e-66
WP_000807540.1|1104185_1104827_+|tail	tail protein	tail	A0A2I6PE59	Staphylococcus_phage	100.0	1.0e-120
WP_000169127.1|1104918_1105374_+	Ig domain-containing protein	NA	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
WP_000589167.1|1105431_1105782_+	hypothetical protein	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
WP_000438833.1|1105823_1105982_+	hypothetical protein	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
WP_001003430.1|1105995_1112196_+|tail	phage tail tape measure protein	tail	M9QQM6	Staphylococcus_phage	99.4	0.0e+00
WP_001190533.1|1112195_1113020_+|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
WP_000384462.1|1113028_1114612_+|tail	phage tail protein	tail	Q8SDP1	Staphylococcus_virus	100.0	7.1e-309
WP_000179864.1|1114611_1114902_+	hypothetical protein	NA	R4WEC3	Staphylococcus_phage	100.0	2.1e-49
WP_000429552.1|1114917_1116828_+	hypothetical protein	NA	A0A2K9VBU3	Staphylococcus_phage	100.0	0.0e+00
WP_000067128.1|1116827_1118294_+|plate	phage baseplate upper protein	plate	A0A2I6PDE3	Staphylococcus_phage	99.4	1.3e-272
WP_001166599.1|1118293_1118683_+	DUF2977 domain-containing protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
WP_000916020.1|1118675_1118840_+	XkdX family protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
WP_000466784.1|1118885_1119185_+	DUF2951 domain-containing protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
WP_000354132.1|1119320_1119758_+|holin	phage holin	holin	A0A2H4PQP0	Staphylococcus_phage	100.0	4.1e-73
WP_001148112.1|1119738_1121184_+	SH3 domain-containing protein	NA	A0A0H3U310	Staphylococcus_phage	99.8	2.2e-296
WP_001795272.1|1121743_1124068_+|protease	serine protease	protease	W5SAB9	Pithovirus	27.4	2.8e-11
1121703:1121729	attR	ATTAGGTGTTAATGTGTCATAATGATA	NA	NA	NA	NA
WP_000021865.1|1124084_1125443_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000414165.1|1125581_1127093_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA	NA
WP_000287265.1|1127579_1128149_-	competence protein ComK	NA	NA	NA	NA	NA
WP_000876826.1|1128358_1128577_+	IDEAL domain-containing protein	NA	NA	NA	NA	NA
WP_000668818.1|1128657_1129644_-	lipoate--protein ligase	NA	NA	NA	NA	NA
WP_000214898.1|1129842_1130019_+	YkvS family protein	NA	NA	NA	NA	NA
WP_001033866.1|1130033_1130636_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
WP_041202886.1|1131551_1131653_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001797239.1|1131662_1131935_+|bacteriocin	lactococcin 972 family bacteriocin	bacteriocin	NA	NA	NA	NA
WP_000870829.1|1131978_1133943_+|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
WP_000668627.1|1133945_1134266_+	YxeA family protein	NA	NA	NA	NA	NA
WP_000571167.1|1134262_1134904_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.0	1.7e-19
WP_001795266.1|1134991_1135282_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001792054.1|1135422_1135560_+	poly(glycerol-phosphate) alpha-glucosyltransferase	NA	NA	NA	NA	NA
WP_000766008.1|1135648_1136005_-	DoxX family protein	NA	NA	NA	NA	NA
WP_001081351.1|1136492_1137452_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
WP_001790177.1|1137497_1137629_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000867357.1|1137692_1137908_-	TM2 domain-containing protein	NA	A0A060AN66	Enterococcus_phage	49.1	1.5e-07
WP_000620949.1|1138072_1138624_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
WP_000070966.1|1138675_1139614_-	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
WP_000190622.1|1139795_1141157_+	isochorismate synthase MenF	NA	NA	NA	NA	NA
WP_000526694.1|1141143_1142817_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
WP_000150197.1|1142803_1143607_+	2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase	NA	NA	NA	NA	NA
WP_000184945.1|1143599_1144421_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
WP_000284458.1|1144658_1144988_-	staphostatin B	NA	NA	NA	NA	NA
WP_001089094.1|1145025_1146207_-|protease	cysteine protease staphopain B	protease	NA	NA	NA	NA
>prophage 6
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	1166245	1174718	2906700		Synechococcus_phage(33.33%)	9	NA	NA
WP_000861573.1|1166245_1166728_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	8.0e-22
WP_001010413.1|1166714_1167839_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA	NA
WP_000174053.1|1167842_1168547_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
WP_000848350.1|1168546_1168810_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
WP_000666806.1|1168811_1169483_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
WP_000032740.1|1169475_1171665_+	phosphoribosylformylglycinamidine synthase subunit PurL	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
WP_000483720.1|1171643_1173128_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
WP_000030811.1|1173120_1174149_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
WP_000238669.1|1174151_1174718_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 7
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	1793034	1802077	2906700	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
WP_000364542.1|1793034_1793553_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
WP_000595011.1|1793574_1795848_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	29.3	8.1e-64
WP_000749795.1|1796050_1798330_-	protein translocase subunit SecDF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
WP_001160682.1|1798604_1798865_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
WP_001112045.1|1798883_1800023_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
WP_001019178.1|1800045_1801071_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
WP_001005768.1|1801072_1802077_-	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	1932081	2039891	2906700	transposase,tRNA,protease	Staphylococcus_phage(92.31%)	97	NA	NA
WP_001050564.1|1932081_1938642_-	LPXTG-anchored repetitive surface protein SasC	NA	A0A2H4PQU6	Staphylococcus_phage	98.3	6.1e-306
WP_000836461.1|1938967_1939279_-	rhodanese-like domain-containing protein	NA	A0A2H4PQR9	Staphylococcus_phage	99.0	4.8e-52
WP_001557386.1|1939300_1941718_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.5	0.0e+00
WP_001025067.1|1942005_1943187_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	99.7	7.3e-218
WP_000526539.1|1943296_1944250_+	TIGR01212 family radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
WP_000764419.1|1944246_1944810_+	class I SAM-dependent methyltransferase	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
WP_000757543.1|1944932_1945334_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000266096.1|1945905_1946733_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
WP_001790712.1|1946735_1946855_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001196362.1|1946965_1947967_+	proline dehydrogenase	NA	A0A2H4PQT6	Staphylococcus_phage	99.4	2.6e-184
WP_001008549.1|1948088_1948553_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	100.0	4.5e-70
WP_001159037.1|1948565_1949747_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.5	5.6e-226
WP_000493887.1|1949757_1950390_-	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	98.6	5.5e-111
WP_000077358.1|1950396_1951440_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A2H4PQS8	Staphylococcus_phage	98.8	5.3e-196
WP_001261668.1|1951920_1953423_-	FAD/NAD(P)-binding protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
WP_000221177.1|1953945_1954260_+	winged helix-turn-helix transcriptional regulator	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
WP_000989121.1|1954259_1955552_+	arsenite efflux transporter membrane subunit ArsB	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
WP_001032833.1|1955638_1956493_-	N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
WP_000384171.1|1956768_1956993_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000671057.1|1957191_1957662_+	RNA polymerase sigma factor SigS	NA	A0A2H4PQT5	Staphylococcus_phage	98.1	8.8e-82
WP_001153742.1|1957774_1958218_+	competence protein ComK	NA	NA	NA	NA	NA
WP_001030469.1|1958204_1958648_-	hypothetical protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
WP_001168903.1|1958943_1959579_+|protease	CPBP family intramembrane metalloprotease SdpA	protease	NA	NA	NA	NA
WP_001096494.1|1960018_1960732_-	transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
WP_000091442.1|1960991_1961294_+	hypothetical protein	NA	NA	NA	NA	NA
WP_001200542.1|1961549_1961915_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
WP_000623470.1|1961911_1962265_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	94.0	3.8e-21
WP_000453306.1|1964261_1965095_-	aldo/keto reductase	NA	A0A2H4PQR8	Staphylococcus_phage	99.3	7.8e-158
WP_000366163.1|1965306_1966215_-	NERD domain-containing protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
WP_000933820.1|1966336_1967533_-	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	99.5	4.3e-218
WP_000109906.1|1967904_1969497_+	phosphoenolpyruvate carboxykinase (ATP)	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
WP_001822900.1|1969874_1970621_-	S9 family peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.4e-142
WP_000672013.1|1970625_1971099_-	nucleoside triphosphatase YtkD	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	7.2e-84
WP_000718107.1|1971164_1971422_+	membrane protein insertion efficiency factor YidD	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
WP_000778528.1|1971418_1972420_-	o-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.3	5.3e-185
WP_000348364.1|1972424_1973903_-	o-succinylbenzoate--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.6	2.8e-283
WP_012840523.1|1974061_1974517_-	DUF4909 domain-containing protein	NA	A0A2H4PQN7	Staphylococcus_phage	99.3	3.6e-80
WP_001795210.1|1974820_1975471_+	excalibur calcium-binding domain-containing protein	NA	A0A2H4PQM8	Staphylococcus_phage	94.0	2.9e-51
WP_000070642.1|1975551_1976547_+	DUF4352 domain-containing protein	NA	A0A2H4PQN2	Staphylococcus_phage	97.9	2.6e-67
WP_000669024.1|1976621_1977248_+	hypothetical protein	NA	A0A2H4PQM7	Staphylococcus_phage	79.8	3.1e-74
WP_000627540.1|1977288_1977630_+	DUF3969 family protein	NA	A0A2H4PQN6	Staphylococcus_phage	94.7	1.1e-54
WP_000414216.1|1977730_1978303_+	hypothetical protein	NA	A0A2H4PQN4	Staphylococcus_phage	93.1	2.3e-23
WP_001801861.1|1979657_1979753_+	type I toxin-antitoxin system Fst family toxin PepA1	NA	NA	NA	NA	NA
WP_001792025.1|1979875_1979977_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000072627.1|1981052_1982282_-	restriction endonuclease subunit S	NA	A0A2H4PQP5	Staphylococcus_phage	64.7	4.0e-134
WP_000028669.1|1982274_1983831_-	type I restriction-modification system subunit M	NA	A0A2H4PQP4	Staphylococcus_phage	100.0	1.6e-289
WP_001791797.1|1983994_1984129_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001038702.1|1984191_1984911_-|protease	serine protease SplF	protease	A0A2H4PQP1	Staphylococcus_phage	98.3	1.0e-129
WP_001038872.1|1985031_1985751_-|protease	serine protease SplC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
WP_001039454.1|1985808_1986531_-|protease	serine protease SplB	protease	A0A2H4PQN0	Staphylococcus_phage	98.3	3.5e-130
WP_001039427.1|1986655_1987363_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	97.0	7.9e-127
WP_001092780.1|1988326_1988908_+	DUF4888 domain-containing protein	NA	A0A2H4PQH6	Staphylococcus_phage	64.8	9.6e-54
WP_000550252.1|1989854_1990328_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000543854.1|1990332_1991124_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000782463.1|1991493_1992477_-	bi-component leukocidin LukED subunit D	NA	A0A2H4PQH7	Staphylococcus_phage	99.4	1.8e-185
WP_000473593.1|1992478_1993414_-	bi-component leukocidin LukED subunit E	NA	A0A2H4PQI5	Staphylococcus_phage	99.7	5.1e-174
WP_000206343.1|1994777_1995566_+	DUF1828 domain-containing protein	NA	A0A2H4PQI0	Staphylococcus_phage	98.5	3.6e-144
WP_001253432.1|1996399_1996894_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000617704.1|1996971_1997208_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000848318.1|1997228_1998005_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
WP_000736712.1|1998556_1999333_-	staphylococcal enterotoxin type G	NA	NA	NA	NA	NA
WP_001236362.1|1999615_2000371_-	staphylococcal enterotoxin type N	NA	A0A075M4C7	Staphylococcus_phage	41.4	6.0e-40
WP_000713847.1|2001334_2002063_-	staphylococcal enterotoxin type I	NA	A0A1X9H080	Staphylococcus_phage	39.2	1.1e-27
WP_000821658.1|2002097_2002817_-	staphylococcal enterotoxin type M	NA	A0A1X9H080	Staphylococcus_phage	35.8	2.3e-25
WP_010922839.1|2003097_2003880_-	staphylococcal enterotoxin type O	NA	A0A1X9H080	Staphylococcus_phage	36.7	1.1e-31
WP_000132890.1|2005239_2005794_-	serine hydrolase family protein	NA	NA	NA	NA	NA
WP_000167542.1|2006116_2007517_-	protoporphyrinogen oxidase	NA	NA	NA	NA	NA
WP_000162881.1|2007540_2008464_-	ferrochelatase	NA	NA	NA	NA	NA
WP_000233526.1|2008521_2009559_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
WP_001790154.1|2009548_2009659_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000737975.1|2009821_2010325_+	signal transduction protein TRAP	NA	NA	NA	NA	NA
WP_000551836.1|2010448_2011672_-	ABC transporter permease	NA	NA	NA	NA	NA
WP_000216874.1|2011664_2012405_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
WP_000004981.1|2012538_2012961_+	HIT family protein	NA	NA	NA	NA	NA
WP_000648118.1|2013102_2013468_+	YtxH domain-containing protein	NA	NA	NA	NA	NA
WP_000477959.1|2014202_2014760_+	DUF3267 domain-containing protein	NA	NA	NA	NA	NA
WP_001244175.1|2016046_2016988_-	3'-5' exoribonuclease YhaM	NA	NA	NA	NA	NA
WP_000584630.1|2016984_2019921_-	AAA family ATPase	NA	NA	NA	NA	NA
WP_000238227.1|2019910_2021107_-	exonuclease SbcCD subunit D	NA	NA	NA	NA	NA
WP_001802255.1|2021397_2021496_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000290301.1|2022034_2022379_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
WP_000992518.1|2022447_2023572_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
WP_001557163.1|2023850_2025170_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
WP_000375864.1|2025270_2025735_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
WP_001045135.1|2026090_2026714_-	response regulator transcription factor	NA	NA	NA	NA	NA
WP_000437969.1|2026735_2027848_-	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
WP_000669376.1|2028010_2028832_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
WP_000116228.1|2029284_2030670_-	class II fumarate hydratase	NA	NA	NA	NA	NA
WP_000901023.1|2030865_2031261_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000031108.1|2031808_2031961_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001251224.1|2031985_2032585_-	glucosamine-6-phosphate isomerase	NA	NA	NA	NA	NA
WP_000181395.1|2032743_2033214_-|tRNA	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	tRNA	NA	NA	NA	NA
WP_000379980.1|2033218_2034346_-|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
WP_000590809.1|2034496_2035219_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.7	1.3e-36
WP_000649908.1|2035211_2036669_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
WP_000063582.1|2036926_2037988_-	PTS transporter subunit IIC	NA	NA	NA	NA	NA
WP_001557163.1|2038571_2039891_+|transposase	ISL3-like element IS1181 family transposase	transposase	NA	NA	NA	NA
>prophage 9
NC_009487	Staphylococcus aureus subsp. aureus JH9, complete sequence	2906700	2087163	2181571	2906700	tail,capsid,integrase,terminase,head,holin,tRNA,protease,portal	Staphylococcus_phage(84.62%)	114	2085059:2085083	2183857:2183881
2085059:2085083	attL	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
WP_000027917.1|2087163_2088621_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	tRNA	NA	NA	NA	NA
WP_000170162.1|2088622_2088925_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	tRNA	NA	NA	NA	NA
WP_000957020.1|2089291_2090830_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
WP_000831700.1|2090918_2092118_-	CamS family sex pheromone protein	NA	NA	NA	NA	NA
WP_000774556.1|2092130_2094134_-	NAD-dependent DNA ligase LigA	NA	A0A0K2QQN8	Ralstonia_phage	36.2	1.2e-114
WP_000992924.1|2094137_2096330_-	DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
WP_000272056.1|2096326_2097019_-	heptaprenylglyceryl phosphate synthase	NA	NA	NA	NA	NA
WP_001165363.1|2097190_2097493_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000572878.1|2097601_2098897_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
WP_000827746.1|2099756_2100923_+|protease	cysteine protease staphopain A	protease	NA	NA	NA	NA
WP_000434933.1|2100953_2101280_+	staphostatin A	NA	NA	NA	NA	NA
WP_000669862.1|2101571_2101745_-	NETI motif-containing protein	NA	NA	NA	NA	NA
WP_000011542.1|2101725_2102328_-	DUF2179 domain-containing protein	NA	NA	NA	NA	NA
WP_000040866.1|2102598_2103420_-	ammonia-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	2.3e-69
WP_000284436.1|2103412_2104882_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	5.9e-108
WP_000897635.1|2105065_2106142_+	nitric oxide synthase oxygenase	NA	NA	NA	NA	NA
WP_001177828.1|2106161_2106956_+	prephenate dehydratase	NA	NA	NA	NA	NA
WP_001802312.1|2107027_2107135_+	hypothetical protein	NA	NA	NA	NA	NA
WP_000323161.1|2107145_2108708_-	SLC13 family permease	NA	NA	NA	NA	NA
WP_000275727.1|2108912_2110010_-	pectate lyase	NA	U5PWM6	Bacillus_phage	34.6	3.3e-47
WP_000149686.1|2110378_2110939_+	cysteine hydrolase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
WP_001140871.1|2110991_2111921_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA	NA
WP_001792184.1|2112113_2112287_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001021211.1|2112338_2113718_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
WP_000181315.1|2113837_2114866_-	lactonase family protein	NA	NA	NA	NA	NA
WP_000205106.1|2115135_2115537_+	YolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
WP_000267034.1|2116109_2116283_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001188043.1|2116733_2117774_+	linear amide C-N hydrolase	NA	NA	NA	NA	NA
WP_000713072.1|2117830_2118673_-	DUF4097 family beta strand repeat protein	NA	NA	NA	NA	NA
WP_001033971.1|2118669_2119227_-	DUF1700 domain-containing protein	NA	NA	NA	NA	NA
WP_000966288.1|2119286_2119811_-	membrane protein	NA	NA	NA	NA	NA
WP_000182842.1|2119931_2120495_+	thioredoxin family protein	NA	NA	NA	NA	NA
WP_001221651.1|2120560_2121301_-	phenol-soluble modulin export ABC transporter permease subunit PmtD	NA	NA	NA	NA	NA
WP_000763043.1|2121300_2122173_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtC	NA	A0A2H4PQG7	Staphylococcus_phage	36.0	1.0e-27
WP_000645727.1|2122169_2122850_-	phenol-soluble modulin export ABC transporter permease subunit PmtB	NA	NA	NA	NA	NA
WP_000991306.1|2122850_2123747_-	phenol-soluble modulin export ABC transporter ATP-binding protein PmtA	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	5.0e-17
WP_000691584.1|2123743_2124124_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
WP_000681968.1|2124381_2124558_-	hypothetical protein	NA	NA	NA	NA	NA
WP_000990056.1|2124800_2124899_-	hypothetical protein	NA	NA	NA	NA	NA
WP_001068540.1|2125098_2126385_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
WP_000671712.1|2126663_2126954_-	MAP domain-containing protein	NA	NA	NA	NA	NA
WP_001557458.1|2126968_2128399_-	extracellular adherence protein Eap/Map	NA	NA	NA	NA	NA
WP_000669789.1|2129356_2129536_+	hypothetical protein	NA	A0A1W6JQ29	Staphylococcus_phage	100.0	2.2e-25
WP_001791826.1|2129846_2130107_+	hypothetical protein	NA	M9NS66	Staphylococcus_phage	100.0	2.3e-23
WP_000702263.1|2130159_2130510_-	complement inhibitor SCIN-A	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
WP_000727649.1|2131194_2131644_+	chemotaxis-inhibiting protein CHIPS	NA	A0A1P8L6A8	Staphylococcus_phage	100.0	1.1e-78
WP_000919350.1|2132723_2133215_-	staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
WP_000861038.1|2133405_2134161_-	CHAP domain-containing protein	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
WP_000611512.1|2134172_2134427_-|holin	phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
WP_001791821.1|2134478_2134586_+	hypothetical protein	NA	NA	NA	NA	NA
WP_011447039.1|2134638_2134815_-|holin	putative holin-like toxin	holin	D2JLG3	Staphylococcus_phage	98.3	2.2e-22
WP_000539688.1|2134964_2135261_-	DUF2951 domain-containing protein	NA	D2JLG2	Staphylococcus_phage	100.0	2.9e-46
WP_001040261.1|2135318_2135606_-	hypothetical protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
WP_001153681.1|2135652_2135805_-	hypothetical protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
WP_000582154.1|2135794_2139580_-	hypothetical protein	NA	Q6R866	Staphylococcus_virus	98.3	0.0e+00
WP_000567396.1|2139595_2141080_-|tail	phage tail family protein	tail	A0A2I6PDJ0	Staphylococcus_phage	99.8	4.5e-297
WP_001557459.1|2141076_2145609_-|tail	phage tail tape measure protein	tail	A0EX03	Staphylococcus_phage	98.9	0.0e+00
WP_001096355.1|2145853_2146204_-	hypothetical protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
WP_071621395.1|2146253_2146478_-	Ig-like domain-containing protein	NA	A0A075LYE8	Staphylococcus_phage	100.0	3.0e-32
WP_000985142.1|2146519_2147164_-|tail	phage tail protein	tail	G4KNQ7	Staphylococcus_phage	99.1	1.9e-119
WP_000565498.1|2147164_2147572_-	hypothetical protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
WP_000114341.1|2147568_2147973_-	HK97 gp10 family phage protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
WP_000755150.1|2147969_2148332_-|head,tail	head-tail adaptor protein	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
WP_000150936.1|2148315_2148600_-|head,tail	phage head-tail adapter protein	head,tail	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
WP_000238242.1|2148612_2148873_-	hypothetical protein	NA	A0A0H3U504	Staphylococcus_phage	98.8	1.4e-41
WP_000154568.1|2148892_2150038_-|capsid	phage major capsid protein	capsid	A0A1W6JPL4	Staphylococcus_phage	99.7	7.3e-215
WP_000861911.1|2150060_2150798_-|protease	Clp protease ClpP	protease	A0A1W6JPK0	Staphylococcus_phage	100.0	1.8e-129
WP_000025268.1|2150781_2151945_-|portal	phage portal protein	portal	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
WP_000625096.1|2151960_2153622_-|terminase	terminase large subunit	terminase	A0A075M4D3	Staphylococcus_phage	100.0	0.0e+00
WP_000402904.1|2153618_2153963_-	hypothetical protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
WP_000988332.1|2154093_2154393_-	HNH endonuclease	NA	A0A2I6PDH9	Staphylococcus_phage	100.0	3.5e-52
WP_000590122.1|2154624_2155041_-	hypothetical protein	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
WP_001557462.1|2155068_2155269_-	DUF1514 family protein	NA	D2JLD9	Staphylococcus_phage	98.5	5.3e-28
WP_000595265.1|2155268_2155418_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
WP_000195784.1|2155414_2155621_-	DUF1381 domain-containing protein	NA	A0A2I6PEA2	Staphylococcus_phage	94.1	1.1e-17
WP_001282077.1|2155617_2155863_-	hypothetical protein	NA	A0A2I6PDW7	Staphylococcus_phage	98.8	2.5e-35
WP_000185693.1|2155899_2156436_-	dUTP diphosphatase	NA	Q9MBR0	Staphylococcus_prophage	100.0	1.6e-95
WP_001065108.1|2156432_2156678_-	DUF1024 family protein	NA	Q8SDV5	Staphylococcus_phage	95.1	1.7e-36
WP_000178987.1|2156692_2156941_-	hypothetical protein	NA	A0A0K1LL46	Staphylococcus_phage	96.3	7.5e-40
WP_000111491.1|2156937_2157195_-	DUF3310 domain-containing protein	NA	A0A1X9H067	Staphylococcus_phage	98.8	6.3e-42
WP_000101267.1|2157194_2157566_-	hypothetical protein	NA	A0A2I6PDG3	Staphylococcus_phage	91.1	3.7e-51
WP_000401969.1|2157578_2157983_-	RusA family crossover junction endodeoxyribonuclease	NA	A0A075M042	Staphylococcus_phage	100.0	8.4e-73
WP_000338528.1|2157991_2158210_-	hypothetical protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
WP_000148333.1|2158216_2159110_-	DnaD domain-containing protein	NA	A0A1P8L6F0	Staphylococcus_phage	100.0	3.2e-141
WP_000934759.1|2159139_2159610_-	single-stranded DNA-binding protein	NA	A0A1P8L6D9	Staphylococcus_phage	100.0	5.7e-81
WP_064135358.1|2159610_2160228_-	MBL fold metallo-hydrolase	NA	A0A1P8L6F7	Staphylococcus_phage	100.0	1.2e-86
WP_000180600.1|2160308_2161229_-	recombinase RecT	NA	A0A1P8L6F6	Staphylococcus_phage	100.0	5.1e-166
WP_000700554.1|2161230_2163174_-	AAA family ATPase	NA	A0A1P8L6F1	Staphylococcus_phage	100.0	0.0e+00
WP_001205732.1|2163182_2163446_-	hypothetical protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
WP_000291510.1|2163454_2163715_-	DUF1108 family protein	NA	A0A1P8L6F5	Staphylococcus_phage	100.0	5.2e-44
WP_000165371.1|2163719_2164022_-	DUF2482 family protein	NA	A0A1P8L6F8	Staphylococcus_phage	100.0	7.0e-48
WP_000048129.1|2164116_2164278_-	DUF1270 family protein	NA	A0A1P8L6G0	Staphylococcus_phage	100.0	1.9e-20
WP_001120201.1|2164274_2164598_-	DUF771 domain-containing protein	NA	A0A075LYF5	Staphylococcus_phage	100.0	3.0e-57
WP_000762521.1|2164652_2165033_+	DUF2513 domain-containing protein	NA	Q9T1Z5	Staphylococcus_phage	100.0	1.2e-68
WP_001148862.1|2165019_2165217_-	hypothetical protein	NA	O80075	Staphylococcus_phage	87.7	3.5e-24
WP_001148338.1|2165232_2165982_-	phage antirepressor KilAC domain-containing protein	NA	B7T097	Staphylococcus_virus	99.6	3.4e-136
WP_000772137.1|2166038_2166248_+	hypothetical protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
WP_000939495.1|2166240_2166381_-	hypothetical protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
WP_000435360.1|2166395_2166839_-	hypothetical protein	NA	W5R971	Staphylococcus_phage	100.0	1.5e-75
WP_000639923.1|2166851_2167094_-	DUF739 family protein	NA	A0A1X9H035	Staphylococcus_phage	100.0	1.6e-39
WP_001083975.1|2167257_2167974_+	helix-turn-helix domain-containing protein	NA	A0A1X9H038	Staphylococcus_phage	100.0	5.4e-131
WP_001557601.1|2167985_2168840_+	HIRAN domain-containing protein	NA	A0A1X9H037	Staphylococcus_phage	100.0	7.3e-151
WP_000345949.1|2168913_2169060_+	hypothetical protein	NA	A0A1X9H032	Staphylococcus_phage	100.0	3.3e-19
WP_000109189.1|2169056_2169242_+	hypothetical protein	NA	U5U7D6	Staphylococcus_phage	100.0	2.3e-25
WP_000705245.1|2169312_2169495_+	hypothetical protein	NA	A0A0H3U4Z4	Staphylococcus_phage	96.7	6.9e-27
WP_001549185.1|2169573_2170287_+	type II toxin-antitoxin system PemK/MazF family toxin	NA	A0A1X9H026	Staphylococcus_phage	100.0	5.0e-129
WP_000857200.1|2170477_2171515_+|integrase	site-specific integrase	integrase	Q38086	Staphylococcus_phage	99.7	2.2e-178
WP_000595392.1|2172633_2173650_-	bi-component leukocidin LukGH subunit G	NA	A0A1X9IGW5	Staphylococcus_phage	30.2	6.7e-26
WP_000791411.1|2173671_2174727_-	bi-component leukocidin LukGH subunit H	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
WP_000206625.1|2175162_2176386_+	ArgE/DapE family deacylase	NA	NA	NA	NA	NA
WP_001045079.1|2176829_2178137_+	TrkH family potassium uptake protein	NA	NA	NA	NA	NA
WP_000240642.1|2178676_2180293_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
WP_000917289.1|2180368_2180653_-	co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
WP_000197630.1|2180827_2181571_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
2183857:2183881	attR	ACCCCAACTTGCATTGTCTGTAGAA	NA	NA	NA	NA
>prophage 1
NC_009477	Staphylococcus aureus subsp. aureus JH9 plasmid pSJH901, complete sequence	30429	21894	28967	30429	transposase	Staphylococcus_phage(50.0%)	6	NA	NA
WP_001105984.1|21894_22569_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	3.8e-126
WP_000393259.1|22878_23271_+	GNAT family N-acetyltransferase	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	6.9e-72
WP_001028144.1|23271_24711_+	aminoglycoside O-phosphotransferase APH(2'')-Ia	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
WP_001105984.1|25252_25927_+|transposase	IS6-like element IS257 family transposase	transposase	A0A0N9RU54	Staphylococcus_phage	98.2	3.8e-126
WP_000360133.1|26036_27497_-	glucose-6-phosphate dehydrogenase	NA	M4SIY3	Cyanophage	36.1	1.4e-72
WP_000097595.1|27560_28967_-	NADP-dependent phosphogluconate dehydrogenase	NA	A0A0P0C6S9	Ostreococcus_lucimarinus_virus	29.0	2.0e-41
