assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000016585.1_ASM1658v1	NC_009438	Shewanella putrefaciens CN-32, complete sequence	1	2076690-2081580	1,1,1,2,3,4	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR,PILER-CR	no	cas1,cas3f,cas7f,cas5,cas6f,DinG	csa3,RT,cas3,WYL,DinG,DEDDh,cas1,cas3f,cas7f,cas5,cas6f,TnsE_C	Unclear	GTTCACCGCCGCACAGGCGGCTTAGAAA,GTTCACCGCCGCACAGGCGGCTTAGAAA,TGTTCACCGCCGCACAGGCGGCTTAGAAA,GTTCACCGCCGCACAGGCGGCTTAGAAA,GTTCACCGCCGCACAGGCGGCTTAGAAA,GTTCACCGCCGCACAGGCGGCTTAGAAA	28,28,29,28,28,28	0	0	NA	NA	I-F:I-F:I-F:I-F:I-F:I-F	81,81,73,73,73,73	81	Unclear	csa3,RT,cas3,WYL,DinG,DEDDh,cas1,cas3f,cas7f,cas5,cas6f,TnsE_C	NA|65aa|up_5|NC_009438.1_2069766_2069961_-,cas7f|316aa|up_2|NC_009438.1_2074032_2074980_+,cas5|337aa|up_1|NC_009438.1_2074988_2075999_+,NA	NA|383aa|up_9|NC_009438.1_2065071_2066220_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|406aa|up_8|NC_009438.1_2066222_2067440_-	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism]	NA|398aa|up_7|NC_009438.1_2067436_2068630_-	pfam00144, Beta-lactamase, Beta-lactamase	NA|301aa|up_6|NC_009438.1_2068757_2069660_+	cd08476, PBP2_CrgA_like_7, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|65aa|up_5|NC_009438.1_2069766_2069961_-	NA	cas1|326aa|up_4|NC_009438.1_2070102_2071080_+	TIGR03637, cas1_YPEST, CRISPR-associated endonuclease Cas1, subtype I-F/YPEST	cas3f|979aa|up_3|NC_009438.1_2071092_2074029_+	cd09673, Cas3_Cas2_I-F, CRISPR/Cas system-associated protein Cas3/Cas2	cas7f|316aa|up_2|NC_009438.1_2074032_2074980_+	NA	cas5|337aa|up_1|NC_009438.1_2074988_2075999_+	NA	cas6f|184aa|up_0|NC_009438.1_2076007_2076559_+	pfam09618, Cas_Csy4, CRISPR-associated protein (Cas_Csy4)	DinG|665aa|down_0|NC_009438.1_2081818_2083813_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|97aa|down_1|NC_009438.1_2083986_2084277_-	pfam14537, Cytochrom_c3_2, Cytochrome c3	NA|662aa|down_2|NC_009438.1_2084863_2086849_-	COG4771, FepA, Outer membrane receptor for ferrienterochelin and colicins [Inorganic ion transport and metabolism]	NA|503aa|down_3|NC_009438.1_2087038_2088547_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|328aa|down_4|NC_009438.1_2089071_2090055_+	PRK00488, pheS, phenylalanyl-tRNA synthetase subunit alpha; Validated	NA|796aa|down_5|NC_009438.1_2090070_2092458_+	PRK00629, pheT, phenylalanyl-tRNA synthetase subunit beta; Reviewed	NA|99aa|down_6|NC_009438.1_2092461_2092758_+	PRK00285, ihfA, integration host factor subunit alpha; Reviewed	NA|314aa|down_7|NC_009438.1_2092854_2093796_+	PRK08943, PRK08943, lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Validated	NA|116aa|down_8|NC_009438.1_2093932_2094280_-	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA	NA|339aa|down_9|NC_009438.1_2094279_2095296_-	cd02197, HypE, HypE (Hydrogenase expression/formation protein)
GCF_000016585.1_ASM1658v1	NC_009438	Shewanella putrefaciens CN-32, complete sequence	2	2141761-2141865	2	CRISPRCasFinder	no		csa3,RT,cas3,WYL,DinG,DEDDh,cas1,cas3f,cas7f,cas5,cas6f,TnsE_C	Orphan	GGGCAAATAAGTGACTCATAGTTTTCCT	28	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas3,WYL,DinG,DEDDh,cas1,cas3f,cas7f,cas5,cas6f,TnsE_C	NA,NA|274aa|down_2|NC_009438.1_2145657_2146479_+	NA|197aa|up_9|NC_009438.1_2128191_2128782_+	NF033154, endonuc_SmrA, DNA endonuclease SmrA	NA|214aa|up_8|NC_009438.1_2129058_2129700_+	pfam17939, TetR_C_30, Tetracyclin repressor-like, C-terminal domain	NA|760aa|up_7|NC_009438.1_2129712_2131992_+	PRK13026, PRK13026, acyl-CoA dehydrogenase; Reviewed	NA|480aa|up_6|NC_009438.1_2132145_2133585_-	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|285aa|up_5|NC_009438.1_2133769_2134624_-	PRK11302, PRK11302, DNA-binding transcriptional regulator HexR; Provisional	NA|491aa|up_4|NC_009438.1_2134934_2136407_+	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated	NA|233aa|up_3|NC_009438.1_2136416_2137115_+	cd01400, 6PGL, 6PGL: 6-Phosphogluconolactonase (6PGL) subfamily; 6PGL catalyzes the second step of the oxidative phase of the pentose phosphate pathway, the hydrolyzation of 6-phosphoglucono-1,5-lactone (delta form) to 6-phosphogluconate	NA|609aa|up_2|NC_009438.1_2137139_2138966_+	PRK09054, PRK09054, phosphogluconate dehydratase; Validated	NA|214aa|up_1|NC_009438.1_2138985_2139627_+	PRK05718, PRK05718, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional	NA|450aa|up_0|NC_009438.1_2139816_2141166_-	PRK05318, PRK05318, deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional	NA|405aa|down_0|NC_009438.1_2142061_2143276_-	PRK09265, PRK09265, aminotransferase AlaT; Validated	NA|461aa|down_1|NC_009438.1_2144061_2145444_+	COG1757, NhaC, Na+/H+ antiporter [Energy production and conversion]	NA|274aa|down_2|NC_009438.1_2145657_2146479_+	NA	NA|187aa|down_3|NC_009438.1_2146660_2147221_-	PRK00529, PRK00529, elongation factor P; Validated	NA|393aa|down_4|NC_009438.1_2147265_2148444_-	pfam10093, EarP, Elongation-Factor P (EF-P) rhamnosyltransferase EarP	NA|176aa|down_5|NC_009438.1_2148553_2149081_-	PRK09267, PRK09267, flavodoxin FldA; Validated	NA|91aa|down_6|NC_009438.1_2149137_2149410_-	PRK11675, PRK11675, LexA regulated protein; Provisional	NA|74aa|down_7|NC_009438.1_2149421_2149643_-	pfam10981, DUF2788, Protein of unknown function (DUF2788)	NA|259aa|down_8|NC_009438.1_2149744_2150521_-	PRK10673, PRK10673, esterase	NA|186aa|down_9|NC_009438.1_2150803_2151361_+	PRK11187, PRK11187, replication initiation negative regulator SeqA
GCF_000016585.1_ASM1658v1	NC_009438	Shewanella putrefaciens CN-32, complete sequence	3	2164397-2164516	3	CRISPRCasFinder	no		csa3,RT,cas3,WYL,DinG,DEDDh,cas1,cas3f,cas7f,cas5,cas6f,TnsE_C	Orphan	ATTAGCTCAGTTGATAAAGGTTAACAGACGATACCTTTAT	40	0	0	NA	NA	NA	1	1	Orphan	csa3,RT,cas3,WYL,DinG,DEDDh,cas1,cas3f,cas7f,cas5,cas6f,TnsE_C	NA,NA|145aa|down_2|NC_009438.1_2167646_2168081_-	NA|551aa|up_9|NC_009438.1_2151407_2153060_+	cd05801, PGM_like3, This bacterial PGM-like (phosphoglucomutase-like) protein of unknown function belongs to the alpha-D-phosphohexomutase superfamily	NA|160aa|up_8|NC_009438.1_2153143_2153623_-	pfam01625, PMSR, Peptide methionine sulfoxide reductase	NA|345aa|up_7|NC_009438.1_2153919_2154954_+	PRK05324, PRK05324, succinylglutamate desuccinylase; Provisional	NA|393aa|up_6|NC_009438.1_2155116_2156295_+	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	NA|326aa|up_5|NC_009438.1_2156298_2157276_+	PTZ00182, PTZ00182, 3-methyl-2-oxobutanate dehydrogenase; Provisional	NA|541aa|up_4|NC_009438.1_2157285_2158908_+	PRK11855, PRK11855, dihydrolipoamide acetyltransferase; Reviewed	NA|361aa|up_3|NC_009438.1_2159040_2160123_+	PRK09375, PRK09375, quinolinate synthase NadA	NA|337aa|up_2|NC_009438.1_2160281_2161292_-	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism]	NA|296aa|up_1|NC_009438.1_2161498_2162386_-	pfam11207, DUF2989, Protein of unknown function (DUF2989)	NA|478aa|up_0|NC_009438.1_2162589_2164023_+	PRK08289, PRK08289, glyceraldehyde-3-phosphate dehydrogenase; Reviewed	NA|485aa|down_0|NC_009438.1_2165569_2167024_+	COG2989, COG2989, Uncharacterized protein conserved in bacteria [Function unknown]	NA|183aa|down_1|NC_009438.1_2167147_2167696_+	pfam05951, Peptidase_M15_2, Bacterial protein of unknown function (DUF882)	NA|145aa|down_2|NC_009438.1_2167646_2168081_-	NA	NA|96aa|down_3|NC_009438.1_2168382_2168670_+	PRK05943, PRK05943, 50S ribosomal protein L25; Reviewed	NA|1306aa|down_4|NC_009438.1_2168809_2172727_-	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown]	NA|618aa|down_5|NC_009438.1_2172723_2174577_-	COG0729, COG0729, Outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|344aa|down_6|NC_009438.1_2174697_2175729_+	pfam01112, Asparaginase_2, Asparaginase	NA|139aa|down_7|NC_009438.1_2175851_2176268_+	cd04629, CBS_pair_bac, Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria	NA|1294aa|down_8|NC_009438.1_2176362_2180244_+	TIGR01967, ATP-dependent_RNA_helicase_HrpA, RNA helicase HrpA	NA|53aa|down_9|NC_009438.1_2180767_2180926_+	pfam06796, NapE, Periplasmic nitrate reductase protein NapE
