assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000016565.1_ASM1656v1	NC_009439	Pseudomonas mendocina ymp, complete genome	1	3437657-3437746	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Orphan	CCGTAGGGTGCGCCATGCGCACC	23	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|134aa|up_4|NC_009439.1_3432420_3432822_-,NA	NA|47aa|up_9|NC_009439.1_3428342_3428483_+	PRK08177, PRK08177, SDR family oxidoreductase	NA|593aa|up_8|NC_009439.1_3428703_3430482_+	PTZ00456, PTZ00456, acyl-CoA dehydrogenase; Provisional	NA|182aa|up_7|NC_009439.1_3430618_3431164_+	pfam16036, Chalcone_3, Chalcone isomerase-like	NA|178aa|up_6|NC_009439.1_3431172_3431706_+	pfam12915, DUF3833, Protein of unknown function (DUF3833)	NA|237aa|up_5|NC_009439.1_3431702_3432413_+	PRK09009, PRK09009, SDR family oxidoreductase	NA|134aa|up_4|NC_009439.1_3432420_3432822_-	NA	NA|226aa|up_3|NC_009439.1_3432937_3433615_+	pfam13852, DUF4197, Protein of unknown function (DUF4197)	NA|260aa|up_2|NC_009439.1_3433663_3434443_-	cd01948, EAL, EAL domain	NA|654aa|up_1|NC_009439.1_3434744_3436706_-	PRK00174, PRK00174, acetyl-CoA synthetase; Provisional	NA|187aa|up_0|NC_009439.1_3437082_3437643_+	cd01285, nucleoside_deaminase, Nucleoside deaminases include adenosine, guanine and cytosine deaminases	NA|518aa|down_0|NC_009439.1_3437800_3439354_-	COG3283, TyrR, Transcriptional regulator of aromatic amino acids metabolism [Transcription / Amino acid transport and metabolism]	NA|262aa|down_1|NC_009439.1_3439607_3440393_+	PRK11913, phhA, phenylalanine 4-monooxygenase; Reviewed	NA|118aa|down_2|NC_009439.1_3440514_3440868_+	PRK00823, phhB, pterin-4-alpha-carbinolamine dehydratase; Validated	NA|399aa|down_3|NC_009439.1_3440864_3442061_+	PRK09257, PRK09257, aromatic amino acid transaminase	NA|305aa|down_4|NC_009439.1_3442232_3443147_+	cd13616, PBP2_OsmF, Substrate-binding domain OsmF of an osmoregulated ABC-type transporter; the type 2 periplasmic-binding protein fold	NA|387aa|down_5|NC_009439.1_3443156_3444317_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|313aa|down_6|NC_009439.1_3444313_3445252_+	COG1125, OpuBA, ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]	NA|243aa|down_7|NC_009439.1_3445251_3445980_+	COG1174, OpuBB, ABC-type proline/glycine betaine transport systems, permease component [Amino acid transport and metabolism]	NA|421aa|down_8|NC_009439.1_3446174_3447437_+	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|753aa|down_9|NC_009439.1_3447527_3449786_+	TIGR02398, Glucosylglycerol-phosphate_synthase, glucosylglycerol-phosphate synthase
GCF_000016565.1_ASM1656v1	NC_009439	Pseudomonas mendocina ymp, complete genome	2	4137496-4139847	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,cas3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCGCTGGCGCGGGGAACAC,CGGTTCATCCCCGCTGGCGCGGGGAACAC,CGGTTCATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	38,38,37	38	TypeI-E	csa3,DEDDh,cas3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA|246aa|up_2|NC_009439.1_4134738_4135476_+,NA	NA|131aa|up_9|NC_009439.1_4127861_4128254_+	cd01040, Mb-like, myoglobin-like; M family globin domain	NA|207aa|up_8|NC_009439.1_4128459_4129080_-	cd02566, PseudoU_synth_RluE, Pseudouridine synthase, Escherichia coli RluE	NA|344aa|up_7|NC_009439.1_4129204_4130236_+	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)	NA|147aa|up_6|NC_009439.1_4130302_4130743_+	PRK10514, PRK10514, putative acetyltransferase; Provisional	NA|447aa|up_5|NC_009439.1_4130739_4132080_-	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]	NA|324aa|up_4|NC_009439.1_4132160_4133132_+	PRK06110, PRK06110, threonine dehydratase	NA|491aa|up_3|NC_009439.1_4133132_4134605_-	PRK08292, PRK08292, AMP nucleosidase; Provisional	NA|246aa|up_2|NC_009439.1_4134738_4135476_+	NA	NA|228aa|up_1|NC_009439.1_4135486_4136170_-	pfam01891, CbiM, Cobalt uptake substrate-specific transmembrane region	NA|248aa|up_0|NC_009439.1_4136706_4137450_+	cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily	cas2|100aa|down_0|NC_009439.1_4139913_4140213_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|296aa|down_1|NC_009439.1_4140212_4141100_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|205aa|down_2|NC_009439.1_4141126_4141741_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|down_3|NC_009439.1_4141715_4142378_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|385aa|down_4|NC_009439.1_4142380_4143535_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|181aa|down_5|NC_009439.1_4143545_4144088_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|514aa|down_6|NC_009439.1_4144084_4145626_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	NA|97aa|down_7|NC_009439.1_4145832_4146123_+	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|94aa|down_8|NC_009439.1_4146119_4146401_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	cas3|886aa|down_9|NC_009439.1_4146403_4149061_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3
GCF_000016565.1_ASM1656v1	NC_009439	Pseudomonas mendocina ymp, complete genome	3	4149157-4150162	3,2,2	CRISPRCasFinder,CRT,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	csa3,DEDDh,cas3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	Type I-E	CGGTTCATCCCCGCTGGCGCGGGGAACAC,CGGTTCATCCCCGCTGGCGCGGGGAACAC,CGGTTCATCCCCGCTGGCGCGGGGAACAC	29,29,29	0	0	NA	NA	I-E:I-E:I-E	16,16,15	16	TypeI-E	csa3,DEDDh,cas3,DinG,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e	NA,NA	cas2|100aa|up_9|NC_009439.1_4139913_4140213_-	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional	cas1|296aa|up_8|NC_009439.1_4140212_4141100_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|205aa|up_7|NC_009439.1_4141126_4141741_-	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas5|221aa|up_6|NC_009439.1_4141715_4142378_-	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas7|385aa|up_5|NC_009439.1_4142380_4143535_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|181aa|up_4|NC_009439.1_4143545_4144088_-	PRK13921, PRK13921, CRISPR-associated Cse2 family protein; Provisional	cas8e|514aa|up_3|NC_009439.1_4144084_4145626_-	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	NA|97aa|up_2|NC_009439.1_4145832_4146123_+	COG3905, COG3905, Predicted transcriptional regulator [Transcription]	NA|94aa|up_1|NC_009439.1_4146119_4146401_+	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	cas3|886aa|up_0|NC_009439.1_4146403_4149061_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|550aa|down_0|NC_009439.1_4150246_4151896_-	PRK11561, PRK11561, isovaleryl CoA dehydrogenase; Provisional	NA|214aa|down_1|NC_009439.1_4151892_4152534_-	PRK14996, PRK14996, TetR family transcriptional regulator; Provisional	NA|803aa|down_2|NC_009439.1_4152671_4155080_-	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS	NA|297aa|down_3|NC_009439.1_4155317_4156208_-	PRK10576, PRK10576, Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD	NA|659aa|down_4|NC_009439.1_4156204_4158181_-	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB	NA|256aa|down_5|NC_009439.1_4158183_4158951_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|249aa|down_6|NC_009439.1_4158944_4159691_-	TIGR03950, hypothetical_protein, siderophore ferric iron reductase, AHA_1954 family	NA|387aa|down_7|NC_009439.1_4159781_4160942_-	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters	NA|266aa|down_8|NC_009439.1_4161085_4161883_+	PRK06427, PRK06427, bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase; Reviewed	NA|210aa|down_9|NC_009439.1_4161879_4162509_+	PRK00043, thiE, thiamine phosphate synthase
