assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000016405.1_ASM1640v1	NC_009428	Rhodobacter sphaeroides ATCC 17025, complete genome	1	132429-132509	1	CRISPRCasFinder	no		csa3,DEDDh,cas3,RT	Orphan	GCCGCATCTCCCCCGCATCTCCCCCGC	27	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,RT,WYL,cas2	NA|96aa|up_1|NC_009428.1_130973_131261_+,NA|92aa|down_0|NC_009428.1_132827_133103_+,NA|63aa|down_1|NC_009428.1_133105_133294_+,NA|81aa|down_5|NC_009428.1_136247_136490_+,NA|120aa|down_6|NC_009428.1_136479_136839_+,NA|175aa|down_7|NC_009428.1_136933_137458_+	NA|756aa|up_9|NC_009428.1_120532_122800_-	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|113aa|up_8|NC_009428.1_123061_123400_+	pfam00543, P-II, Nitrogen regulatory protein P-II	NA|451aa|up_7|NC_009428.1_123427_124780_+	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism]	NA|395aa|up_6|NC_009428.1_124941_126126_-	PRK09257, PRK09257, aromatic amino acid transaminase	NA|283aa|up_5|NC_009428.1_126133_126982_-	COG2897, SseA, Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]	NA|158aa|up_4|NC_009428.1_127074_127548_-	PRK05422, smpB, SsrA-binding protein SmpB	NA|291aa|up_3|NC_009428.1_127677_128550_-	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional	NA|657aa|up_2|NC_009428.1_128701_130672_+	cd13401, Slt70-like, 70kDa soluble lytic transglycosylase (Slt70) and similar proteins	NA|96aa|up_1|NC_009428.1_130973_131261_+	NA	NA|390aa|up_0|NC_009428.1_131257_132427_+	COG3598, RepA, RecA-family ATPase [DNA replication, recombination, and repair]	NA|92aa|down_0|NC_009428.1_132827_133103_+	NA	NA|63aa|down_1|NC_009428.1_133105_133294_+	NA	NA|164aa|down_2|NC_009428.1_133388_133880_+	COG4220, COG4220, Phage DNA packaging protein, Nu1 subunit of terminase [DNA replication, recombination, and repair]	NA|593aa|down_3|NC_009428.1_133866_135645_+	pfam05876, Terminase_GpA, Phage terminase large subunit (GpA)	NA|89aa|down_4|NC_009428.1_135922_136189_-	COG3620, COG3620, Predicted transcriptional regulator with C-terminal CBS domains [Transcription]	NA|81aa|down_5|NC_009428.1_136247_136490_+	NA	NA|120aa|down_6|NC_009428.1_136479_136839_+	NA	NA|175aa|down_7|NC_009428.1_136933_137458_+	NA	NA|444aa|down_8|NC_009428.1_137454_138786_+	pfam05136, Phage_portal_2, Phage portal protein, lambda family	NA|587aa|down_9|NC_009428.1_138782_140543_+	pfam04586, Peptidase_S78, Caudovirus prohead serine protease
GCF_000016405.1_ASM1640v1	NC_009428	Rhodobacter sphaeroides ATCC 17025, complete genome	2	1255177-1255248	2	CRISPRCasFinder	no		csa3,DEDDh,cas3,RT	Orphan	GTCGGTTCCGGTCATGCCGGTGTCGGT	27	1	2	1255204-1255221|1255204-1255221	NC_009428.1_2321264-2321247|NC_009428.1_2751254-2751237	NA	1	1	Orphan	csa3,DEDDh,cas3,RT,WYL,cas2	NA|108aa|up_8|NC_009428.1_1245378_1245702_-,NA|92aa|up_2|NC_009428.1_1251472_1251748_-,NA|126aa|up_1|NC_009428.1_1251938_1252316_+,NA|276aa|down_0|NC_009428.1_1255905_1256733_-,NA|86aa|down_4|NC_009428.1_1259840_1260098_-,NA|108aa|down_6|NC_009428.1_1262914_1263238_+,NA|60aa|down_7|NC_009428.1_1263282_1263462_-	NA|91aa|up_9|NC_009428.1_1245093_1245366_-	pfam09928, DUF2160, Predicted small integral membrane protein (DUF2160)	NA|108aa|up_8|NC_009428.1_1245378_1245702_-	NA	NA|268aa|up_7|NC_009428.1_1245701_1246505_-	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]	NA|291aa|up_6|NC_009428.1_1246542_1247415_-	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism]	NA|362aa|up_5|NC_009428.1_1247414_1248500_-	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|363aa|up_4|NC_009428.1_1248510_1249599_-	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]	NA|535aa|up_3|NC_009428.1_1249720_1251325_-	PRK12266, glpD, glycerol-3-phosphate dehydrogenase; Reviewed	NA|92aa|up_2|NC_009428.1_1251472_1251748_-	NA	NA|126aa|up_1|NC_009428.1_1251938_1252316_+	NA	NA|778aa|up_0|NC_009428.1_1252357_1254691_-	TIGR03074, PQQ_membr_DH, membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family	NA|276aa|down_0|NC_009428.1_1255905_1256733_-	NA	NA|316aa|down_1|NC_009428.1_1256797_1257745_-	COG2823, OsmY, Predicted periplasmic or secreted lipoprotein [General function prediction only]	NA|125aa|down_2|NC_009428.1_1258545_1258920_-	cd17586, REC_PFxFATGY, phosphoacceptor receiver (REC) domain of PFxFATGY motif single-domain (stand-alone) response regulators	NA|251aa|down_3|NC_009428.1_1259062_1259815_+	COG1285, SapB, Uncharacterized membrane protein [Function unknown]	NA|86aa|down_4|NC_009428.1_1259840_1260098_-	NA	NA|847aa|down_5|NC_009428.1_1260094_1262635_-	PRK05972, ligD, ATP-dependent DNA ligase; Reviewed	NA|108aa|down_6|NC_009428.1_1262914_1263238_+	NA	NA|60aa|down_7|NC_009428.1_1263282_1263462_-	NA	NA|168aa|down_8|NC_009428.1_1263621_1264125_+	PRK12546, PRK12546, RNA polymerase sigma factor; Provisional	NA|311aa|down_9|NC_009428.1_1264432_1265365_+	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
GCF_000016405.1_ASM1640v1	NC_009428	Rhodobacter sphaeroides ATCC 17025, complete genome	3	1689851-1689958	3	CRISPRCasFinder	no		csa3,DEDDh,cas3,RT	Orphan	CCGGCCGCAGCGGACGCCGCGCCGCCTTCG	30	0	0	NA	NA	NA	1	1	Orphan	csa3,DEDDh,cas3,RT,WYL,cas2	NA|102aa|up_7|NC_009428.1_1681725_1682031_-,NA|138aa|up_0|NC_009428.1_1688814_1689228_+,NA	NA|270aa|up_9|NC_009428.1_1679534_1680344_-	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms]	NA|400aa|up_8|NC_009428.1_1680340_1681540_-	COG0643, CheA, Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms]	NA|102aa|up_7|NC_009428.1_1681725_1682031_-	NA	NA|379aa|up_6|NC_009428.1_1682457_1683594_+	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms]	NA|108aa|up_5|NC_009428.1_1683607_1683931_+	pfam02049, FliE, Flagellar hook-basal body complex protein FliE	NA|573aa|up_4|NC_009428.1_1683950_1685669_+	PRK06007, fliF, flagellar basal body M-ring protein FliF	NA|340aa|up_3|NC_009428.1_1685670_1686690_+	PRK05686, fliG, flagellar motor switch protein G; Validated	NA|265aa|up_2|NC_009428.1_1686693_1687488_+	PRK05687, fliH, flagellar assembly protein FliH	NA|443aa|up_1|NC_009428.1_1687484_1688813_+	TIGR03496, FliI_clade1, flagellar protein export ATPase FliI	NA|138aa|up_0|NC_009428.1_1688814_1689228_+	NA	NA|221aa|down_0|NC_009428.1_1690405_1691068_+	cd17470, T3SS_Flik_C, C-terminal domain of flagellar hook-length control protein FliK and similar domains	NA|193aa|down_1|NC_009428.1_1691078_1691657_+	pfam03748, FliL, Flagellar basal body-associated protein FliL	NA|324aa|down_2|NC_009428.1_1691660_1692632_+	TIGR01397, Flagellar_motor_switch_protein_FliM, flagellar motor switch protein FliM	NA|99aa|down_3|NC_009428.1_1692674_1692971_+	TIGR02480, Flagellar_motor_switch_protein_FliN, flagellar motor switch protein FliN	NA|86aa|down_4|NC_009428.1_1693047_1693305_+	TIGR03500, FliO_TIGR, flagellar biosynthetic protein FliO	NA|247aa|down_5|NC_009428.1_1693301_1694042_+	PRK05699, fliP, flagellar biosynthesis protein FliP; Reviewed	NA|89aa|down_6|NC_009428.1_1694041_1694308_+	TIGR01402, Flagellar_biosynthetic_protein_FliQ, flagellar biosynthetic protein FliQ	NA|267aa|down_7|NC_009428.1_1694307_1695108_+	TIGR01400, Flagellar_biosynthetic_protein_FliR, flagellar biosynthetic protein FliR	NA|381aa|down_8|NC_009428.1_1695094_1696237_+	TIGR00328, Flagellar_biosynthetic_protein_FlhB, flagellar biosynthetic protein FlhB	NA|247aa|down_9|NC_009428.1_1696306_1697047_+	PRK12270, kgd, multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
