assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCF_000016245.1_ASM1624v1	NC_009457	Vibrio cholerae O395 chromosome 1, complete sequence	1	2836101-2838508	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2,DEDDh	DinG,csa3,DEDDh,cas3,WYL,csx1,RT,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	Type I-E	GTCTTCCCCACGCAGGTGGGGGTGTTTC,GTCTTCCCCACGCAGGTGGGGGTGTTTC,GTCTTCCCCACGCAGGTGGGGGTGTTTC	28,28,28	0	0	NA	NA	I-B,III-A,III-B:I-B,III-A,III-B:I-B,III-A,III-B	33,39,39	39	TypeI-E	cas3,csa3,PD-DExK,DinG,DEDDh,WYL,csx1,RT,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	NA,NA|232aa|down_0|NC_009457.1_2838620_2839316_+,NA|134aa|down_4|NC_009457.1_2840824_2841226_-	NA|412aa|up_9|NC_009457.1_2825226_2826462_+	cd00801, INT_P4_C, Bacteriophage P4 integrase, C-terminal catalytic domain	NA|328aa|up_8|NC_009457.1_2826467_2827451_+	COG3177, COG3177, Fic family protein [Function unknown]	cas3|871aa|up_7|NC_009457.1_2827773_2830386_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|508aa|up_6|NC_009457.1_2830388_2831912_+	cd09729, Cse1_I-E, CRISPR/Cas system-associated protein Cse1	cse2gr11|187aa|up_5|NC_009457.1_2831925_2832486_+	cd09731, Cse2_I-E, CRISPR/Cas system-associated protein Cse2	cas6e|216aa|up_4|NC_009457.1_2832478_2833126_+	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e	cas7|348aa|up_3|NC_009457.1_2833147_2834191_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|239aa|up_2|NC_009457.1_2834194_2834911_+	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI	cas1|292aa|up_1|NC_009457.1_2834913_2835789_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|97aa|up_0|NC_009457.1_2835766_2836057_+	TIGR01873, CRISPR-associated_endoribonuclease_Cas2, CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI	NA|232aa|down_0|NC_009457.1_2838620_2839316_+	NA	NA|217aa|down_1|NC_009457.1_2839500_2840151_-	pfam11726, Inovirus_Gp2, Inovirus Gp2	NA|74aa|down_2|NC_009457.1_2840303_2840525_-	COG3311, AlpA, Predicted transcriptional regulator [Transcription]	NA|78aa|down_3|NC_009457.1_2840524_2840758_-	pfam05930, Phage_AlpA, Prophage CP4-57 regulatory protein (AlpA)	NA|134aa|down_4|NC_009457.1_2840824_2841226_-	NA	NA|99aa|down_5|NC_009457.1_2841968_2842265_-	PRK00430, fis, DNA-binding transcriptional regulator Fis	NA|323aa|down_6|NC_009457.1_2842288_2843257_-	PRK10415, PRK10415, tRNA-dihydrouridine synthase B; Provisional	NA|296aa|down_7|NC_009457.1_2843396_2844284_-	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA)	NA|448aa|down_8|NC_009457.1_2844492_2845836_-	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated	NA|154aa|down_9|NC_009457.1_2845850_2846312_-	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein
GCF_000016245.1_ASM1624v1	NC_009456	Vibrio cholerae O395 chromosome 2, complete sequence	1	820537-820639	1	CRISPRCasFinder	no		cas3,csa3,PD-DExK	Orphan	TGGGGTGATTTTCATACCTATAAA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,csa3,PD-DExK,DinG,DEDDh,WYL,csx1,RT,cas8e,cse2gr11,cas6e,cas7,cas5,cas1,cas2	NA|96aa|up_8|NC_009456.1_811821_812109_-,NA|223aa|up_7|NC_009456.1_812260_812929_-,NA|165aa|up_4|NC_009456.1_814222_814717_+,NA|134aa|up_2|NC_009456.1_817179_817581_-,NA|126aa|up_1|NC_009456.1_817595_817973_-,NA|92aa|up_0|NC_009456.1_817989_818265_-,NA|79aa|down_1|NC_009456.1_822078_822315_+,NA|61aa|down_2|NC_009456.1_822321_822504_+,NA|347aa|down_3|NC_009456.1_822481_823522_+,NA|284aa|down_4|NC_009456.1_823606_824458_+,NA|51aa|down_5|NC_009456.1_824611_824764_+,NA|49aa|down_6|NC_009456.1_824845_824992_+,NA|113aa|down_7|NC_009456.1_825157_825496_+,NA|100aa|down_8|NC_009456.1_825517_825817_+,NA|159aa|down_9|NC_009456.1_826270_826747_+	NA|124aa|up_9|NC_009456.1_811309_811681_-	pfam03819, MazG, MazG nucleotide pyrophosphohydrolase domain	NA|96aa|up_8|NC_009456.1_811821_812109_-	NA	NA|223aa|up_7|NC_009456.1_812260_812929_-	NA	NA|91aa|up_6|NC_009456.1_813159_813432_+	COG4453, COG4453, Uncharacterized protein conserved in bacteria [Function unknown]	NA|166aa|up_5|NC_009456.1_813428_813926_+	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|165aa|up_4|NC_009456.1_814222_814717_+	NA	NA|553aa|up_3|NC_009456.1_815034_816693_+	cd00338, Ser_Recombinase, Serine Recombinase family, catalytic domain; a DNA binding domain may be present either N- or C-terminal to the catalytic domain	NA|134aa|up_2|NC_009456.1_817179_817581_-	NA	NA|126aa|up_1|NC_009456.1_817595_817973_-	NA	NA|92aa|up_0|NC_009456.1_817989_818265_-	NA	NA|238aa|down_0|NC_009456.1_820979_821693_+	pfam09339, HTH_IclR, IclR helix-turn-helix domain	NA|79aa|down_1|NC_009456.1_822078_822315_+	NA	NA|61aa|down_2|NC_009456.1_822321_822504_+	NA	NA|347aa|down_3|NC_009456.1_822481_823522_+	NA	NA|284aa|down_4|NC_009456.1_823606_824458_+	NA	NA|51aa|down_5|NC_009456.1_824611_824764_+	NA	NA|49aa|down_6|NC_009456.1_824845_824992_+	NA	NA|113aa|down_7|NC_009456.1_825157_825496_+	NA	NA|100aa|down_8|NC_009456.1_825517_825817_+	NA	NA|159aa|down_9|NC_009456.1_826270_826747_+	NA
